d3106602 |
1 | /************************************************************************** |
2 | * Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. * |
3 | * * |
4 | * Author: The ALICE Off-line Project. * |
5 | * Contributors are mentioned in the code where appropriate. * |
6 | * * |
7 | * Permission to use, copy, modify and distribute this software and its * |
8 | * documentation strictly for non-commercial purposes is hereby granted * |
9 | * without fee, provided that the above copyright notice appears in all * |
10 | * copies and that both the copyright notice and this permission notice * |
11 | * appear in the supporting documentation. The authors make no claims * |
12 | * about the suitability of this software for any purpose. It is * |
13 | * provided "as is" without express or implied warranty. * |
14 | **************************************************************************/ |
15 | |
16 | /* $Id$ */ |
17 | // Author: Andrei Gheata, 31/05/2006 |
18 | |
19 | //============================================================================== |
c7597be6 |
20 | // AliAnalysisManager - Manager analysis class. Allows creation of several |
37153431 |
21 | // analysis tasks and data containers storing their input/output. Allows |
d3106602 |
22 | // connecting/chaining tasks via shared data containers. Serializes the current |
23 | // event for all tasks depending only on initial input data. |
24 | //============================================================================== |
25 | // |
26 | //============================================================================== |
27 | |
f5cbe261 |
28 | #include "AliAnalysisManager.h" |
11026a80 |
29 | |
8ddad121 |
30 | #include <cerrno> |
f5cbe261 |
31 | #include <Riostream.h> |
84fcd93f |
32 | #include <TError.h> |
77dad4a9 |
33 | #include <TMap.h> |
c52c2132 |
34 | #include <TClass.h> |
35 | #include <TFile.h> |
096b5a2e |
36 | #include <TMath.h> |
37 | #include <TH1.h> |
c52c2132 |
38 | #include <TMethodCall.h> |
39 | #include <TChain.h> |
40 | #include <TSystem.h> |
41 | #include <TROOT.h> |
8c0ab8e8 |
42 | #include <TCanvas.h> |
a0e2e8b1 |
43 | #include <TStopwatch.h> |
d3106602 |
44 | |
20b7268e |
45 | #include "AliLog.h" |
8d7d3b59 |
46 | #include "AliAnalysisSelector.h" |
c57f56b7 |
47 | #include "AliAnalysisGrid.h" |
d3106602 |
48 | #include "AliAnalysisTask.h" |
49 | #include "AliAnalysisDataContainer.h" |
50 | #include "AliAnalysisDataSlot.h" |
d2f1d9ef |
51 | #include "AliVEventHandler.h" |
c2922515 |
52 | #include "AliVEventPool.h" |
8c0ab8e8 |
53 | #include "AliSysInfo.h" |
f5cbe261 |
54 | #include "AliAnalysisStatistics.h" |
d3106602 |
55 | |
56 | ClassImp(AliAnalysisManager) |
57 | |
c52c2132 |
58 | AliAnalysisManager *AliAnalysisManager::fgAnalysisManager = NULL; |
84fcd93f |
59 | TString AliAnalysisManager::fgCommonFileName = ""; |
f03a8355 |
60 | Int_t AliAnalysisManager::fPBUpdateFreq = 1; |
c52c2132 |
61 | |
d3106602 |
62 | //______________________________________________________________________________ |
c52c2132 |
63 | AliAnalysisManager::AliAnalysisManager(const char *name, const char *title) |
64 | :TNamed(name,title), |
65 | fTree(NULL), |
8c0ab8e8 |
66 | fInputEventHandler(NULL), |
67 | fOutputEventHandler(NULL), |
68 | fMCtruthEventHandler(NULL), |
c57f56b7 |
69 | fEventPool(NULL), |
c52c2132 |
70 | fCurrentEntry(-1), |
8c0ab8e8 |
71 | fNSysInfo(0), |
c52c2132 |
72 | fMode(kLocalAnalysis), |
73 | fInitOK(kFALSE), |
8e1f0465 |
74 | fIsRemote(kFALSE), |
c52c2132 |
75 | fDebug(0), |
26f071d8 |
76 | fSpecialOutputLocation(""), |
37a26056 |
77 | fTasks(NULL), |
78 | fTopTasks(NULL), |
c52c2132 |
79 | fZombies(NULL), |
80 | fContainers(NULL), |
81 | fInputs(NULL), |
8d7d3b59 |
82 | fOutputs(NULL), |
6cd44ee0 |
83 | fParamCont(NULL), |
60a04972 |
84 | fCommonInput(NULL), |
85 | fCommonOutput(NULL), |
c57f56b7 |
86 | fSelector(NULL), |
c07b9ce2 |
87 | fGridHandler(NULL), |
012e169c |
88 | fExtraFiles(""), |
89 | fAutoBranchHandling(kTRUE), |
242accb2 |
90 | fTable(), |
e9247450 |
91 | fRunFromPath(0), |
92 | fNcalls(0), |
f03a8355 |
93 | fMaxEntries(0), |
7acc5b9d |
94 | fStatisticsMsg(), |
f5cbe261 |
95 | fRequestedBranches(), |
77dad4a9 |
96 | fStatistics(0), |
97 | fGlobals(0) |
d3106602 |
98 | { |
99 | // Default constructor. |
c52c2132 |
100 | fgAnalysisManager = this; |
84fcd93f |
101 | fgCommonFileName = "AnalysisResults.root"; |
77dad4a9 |
102 | if (TClass::IsCallingNew() != TClass::kDummyNew) { |
103 | fTasks = new TObjArray(); |
104 | fTopTasks = new TObjArray(); |
105 | fZombies = new TObjArray(); |
106 | fContainers = new TObjArray(); |
107 | fInputs = new TObjArray(); |
108 | fOutputs = new TObjArray(); |
109 | fParamCont = new TObjArray(); |
110 | fGlobals = new TMap(); |
111 | } |
b1310ef5 |
112 | SetEventLoop(kTRUE); |
d3106602 |
113 | } |
114 | |
115 | //______________________________________________________________________________ |
116 | AliAnalysisManager::AliAnalysisManager(const AliAnalysisManager& other) |
c52c2132 |
117 | :TNamed(other), |
327eaf46 |
118 | fTree(NULL), |
8c0ab8e8 |
119 | fInputEventHandler(NULL), |
120 | fOutputEventHandler(NULL), |
121 | fMCtruthEventHandler(NULL), |
84fcd93f |
122 | fEventPool(NULL), |
c52c2132 |
123 | fCurrentEntry(-1), |
8c0ab8e8 |
124 | fNSysInfo(0), |
c52c2132 |
125 | fMode(other.fMode), |
126 | fInitOK(other.fInitOK), |
8e1f0465 |
127 | fIsRemote(other.fIsRemote), |
c52c2132 |
128 | fDebug(other.fDebug), |
26f071d8 |
129 | fSpecialOutputLocation(""), |
37a26056 |
130 | fTasks(NULL), |
131 | fTopTasks(NULL), |
c52c2132 |
132 | fZombies(NULL), |
133 | fContainers(NULL), |
134 | fInputs(NULL), |
8d7d3b59 |
135 | fOutputs(NULL), |
6cd44ee0 |
136 | fParamCont(NULL), |
60a04972 |
137 | fCommonInput(NULL), |
138 | fCommonOutput(NULL), |
c57f56b7 |
139 | fSelector(NULL), |
c07b9ce2 |
140 | fGridHandler(NULL), |
012e169c |
141 | fExtraFiles(), |
142 | fAutoBranchHandling(other.fAutoBranchHandling), |
242accb2 |
143 | fTable(), |
e9247450 |
144 | fRunFromPath(0), |
145 | fNcalls(other.fNcalls), |
f03a8355 |
146 | fMaxEntries(other.fMaxEntries), |
7acc5b9d |
147 | fStatisticsMsg(other.fStatisticsMsg), |
f5cbe261 |
148 | fRequestedBranches(other.fRequestedBranches), |
77dad4a9 |
149 | fStatistics(other.fStatistics), |
150 | fGlobals(other.fGlobals) |
d3106602 |
151 | { |
152 | // Copy constructor. |
37a26056 |
153 | fTasks = new TObjArray(*other.fTasks); |
154 | fTopTasks = new TObjArray(*other.fTopTasks); |
155 | fZombies = new TObjArray(*other.fZombies); |
c52c2132 |
156 | fContainers = new TObjArray(*other.fContainers); |
157 | fInputs = new TObjArray(*other.fInputs); |
158 | fOutputs = new TObjArray(*other.fOutputs); |
6cd44ee0 |
159 | fParamCont = new TObjArray(*other.fParamCont); |
84fcd93f |
160 | fgCommonFileName = "AnalysisResults.root"; |
c52c2132 |
161 | fgAnalysisManager = this; |
d3106602 |
162 | } |
163 | |
164 | //______________________________________________________________________________ |
165 | AliAnalysisManager& AliAnalysisManager::operator=(const AliAnalysisManager& other) |
166 | { |
167 | // Assignment |
168 | if (&other != this) { |
c52c2132 |
169 | TNamed::operator=(other); |
54cff064 |
170 | fInputEventHandler = other.fInputEventHandler; |
6bb2b24f |
171 | fOutputEventHandler = other.fOutputEventHandler; |
172 | fMCtruthEventHandler = other.fMCtruthEventHandler; |
c2922515 |
173 | fEventPool = other.fEventPool; |
c52c2132 |
174 | fTree = NULL; |
175 | fCurrentEntry = -1; |
8c0ab8e8 |
176 | fNSysInfo = other.fNSysInfo; |
c52c2132 |
177 | fMode = other.fMode; |
37a26056 |
178 | fInitOK = other.fInitOK; |
8e1f0465 |
179 | fIsRemote = other.fIsRemote; |
c52c2132 |
180 | fDebug = other.fDebug; |
37a26056 |
181 | fTasks = new TObjArray(*other.fTasks); |
182 | fTopTasks = new TObjArray(*other.fTopTasks); |
183 | fZombies = new TObjArray(*other.fZombies); |
c52c2132 |
184 | fContainers = new TObjArray(*other.fContainers); |
185 | fInputs = new TObjArray(*other.fInputs); |
186 | fOutputs = new TObjArray(*other.fOutputs); |
6cd44ee0 |
187 | fParamCont = new TObjArray(*other.fParamCont); |
60a04972 |
188 | fCommonInput = NULL; |
189 | fCommonOutput = NULL; |
8d7d3b59 |
190 | fSelector = NULL; |
c57f56b7 |
191 | fGridHandler = NULL; |
c07b9ce2 |
192 | fExtraFiles = other.fExtraFiles; |
84fcd93f |
193 | fgCommonFileName = "AnalysisResults.root"; |
c52c2132 |
194 | fgAnalysisManager = this; |
012e169c |
195 | fAutoBranchHandling = other.fAutoBranchHandling; |
242accb2 |
196 | fTable.Clear("nodelete"); |
197 | fRunFromPath = other.fRunFromPath; |
e9247450 |
198 | fNcalls = other. fNcalls; |
f03a8355 |
199 | fMaxEntries = other.fMaxEntries; |
e9247450 |
200 | fStatisticsMsg = other.fStatisticsMsg; |
7acc5b9d |
201 | fRequestedBranches = other.fRequestedBranches; |
f5cbe261 |
202 | fStatistics = other.fStatistics; |
77dad4a9 |
203 | fGlobals = new TMap(); |
d3106602 |
204 | } |
205 | return *this; |
206 | } |
207 | |
208 | //______________________________________________________________________________ |
209 | AliAnalysisManager::~AliAnalysisManager() |
210 | { |
211 | // Destructor. |
d3106602 |
212 | if (fTasks) {fTasks->Delete(); delete fTasks;} |
213 | if (fTopTasks) delete fTopTasks; |
214 | if (fZombies) delete fZombies; |
c52c2132 |
215 | if (fContainers) {fContainers->Delete(); delete fContainers;} |
216 | if (fInputs) delete fInputs; |
217 | if (fOutputs) delete fOutputs; |
6cd44ee0 |
218 | if (fParamCont) delete fParamCont; |
c57f56b7 |
219 | if (fGridHandler) delete fGridHandler; |
f3c07fbd |
220 | if (fInputEventHandler) delete fInputEventHandler; |
221 | if (fOutputEventHandler) delete fOutputEventHandler; |
222 | if (fMCtruthEventHandler) delete fMCtruthEventHandler; |
223 | if (fEventPool) delete fEventPool; |
c52c2132 |
224 | if (fgAnalysisManager==this) fgAnalysisManager = NULL; |
77dad4a9 |
225 | if (fGlobals) {fGlobals->DeleteAll(); delete fGlobals;} |
d3106602 |
226 | } |
c52c2132 |
227 | |
d3106602 |
228 | //______________________________________________________________________________ |
327eaf46 |
229 | Int_t AliAnalysisManager::GetEntry(Long64_t entry, Int_t getall) |
230 | { |
231 | // Read one entry of the tree or a whole branch. |
c52c2132 |
232 | fCurrentEntry = entry; |
012e169c |
233 | if (!fAutoBranchHandling) |
f5cbe261 |
234 | return 123456789; |
235 | return fTree ? fTree->GetTree()->GetEntry(entry, getall) : -1; |
327eaf46 |
236 | } |
242accb2 |
237 | |
238 | //______________________________________________________________________________ |
239 | Int_t AliAnalysisManager::GetRunFromAlienPath(const char *path) |
240 | { |
241 | // Attempt to extract run number from input data path. Works only for paths to |
242 | // alice data in alien. |
243 | // sim: /alice/sim/<production>/run_no/... |
244 | // data: /alice/data/year/period/000run_no/... (ESD or AOD) |
ff5309f8 |
245 | TString type = "unknown"; |
242accb2 |
246 | TString s(path); |
ff5309f8 |
247 | if (s.Contains("/alice/data")) type = "real"; |
248 | else if (s.Contains("/alice/sim")) type = "simulated"; |
242accb2 |
249 | TString srun; |
ff5309f8 |
250 | Int_t ind1, ind2; |
251 | ind1 = s.Index("/00"); |
252 | if (ind1>0) { |
253 | ind2 = s.Index("/",ind1+1); |
8c1f7958 |
254 | if (ind2-ind1>8) srun = s(ind1+1, ind2-ind1-1); |
ff5309f8 |
255 | } |
256 | if (srun.IsNull()) { |
257 | ind1 = s.Index("/LHC"); |
258 | if (ind1>0) { |
259 | ind1 = s.Index("/",ind1+1); |
260 | if (ind1>0) { |
261 | ind2 = s.Index("/",ind1+1); |
262 | if (ind2>0) srun = s(ind1+1, ind2-ind1-1); |
263 | } |
242accb2 |
264 | } |
ff5309f8 |
265 | } |
266 | Int_t run = srun.Atoi(); |
267 | if (run>0) printf("=== GetRunFromAlienPath: run %d of %s data ===\n", run, type.Data()); |
242accb2 |
268 | return run; |
269 | } |
270 | |
327eaf46 |
271 | //______________________________________________________________________________ |
2d626244 |
272 | Bool_t AliAnalysisManager::Init(TTree *tree) |
d3106602 |
273 | { |
274 | // The Init() function is called when the selector needs to initialize |
275 | // a new tree or chain. Typically here the branch addresses of the tree |
276 | // will be set. It is normaly not necessary to make changes to the |
277 | // generated code, but the routine can be extended by the user if needed. |
278 | // Init() will be called many times when running with PROOF. |
2d626244 |
279 | Bool_t init = kFALSE; |
280 | if (!tree) return kFALSE; // Should not happen - protected in selector caller |
cd463514 |
281 | if (fDebug > 1) { |
84fcd93f |
282 | printf("->AliAnalysisManager::Init(%s)\n", tree->GetName()); |
c52c2132 |
283 | } |
f3d59a0d |
284 | // Call InitTree of EventHandler |
36e82a52 |
285 | if (fOutputEventHandler) { |
286 | if (fMode == kProofAnalysis) { |
2d626244 |
287 | init = fOutputEventHandler->Init(0x0, "proof"); |
36e82a52 |
288 | } else { |
2d626244 |
289 | init = fOutputEventHandler->Init(0x0, "local"); |
36e82a52 |
290 | } |
2d626244 |
291 | if (!init) { |
292 | Error("Init", "Output event handler failed to initialize"); |
293 | return kFALSE; |
294 | } |
36e82a52 |
295 | } |
2d626244 |
296 | |
fdb458ec |
297 | if (fInputEventHandler) { |
36e82a52 |
298 | if (fMode == kProofAnalysis) { |
2d626244 |
299 | init = fInputEventHandler->Init(tree, "proof"); |
36e82a52 |
300 | } else { |
2d626244 |
301 | init = fInputEventHandler->Init(tree, "local"); |
36e82a52 |
302 | } |
2d626244 |
303 | if (!init) { |
304 | Error("Init", "Input event handler failed to initialize tree"); |
305 | return kFALSE; |
306 | } |
e7ae3836 |
307 | } else { |
308 | // If no input event handler we need to get the tree once |
309 | // for the chain |
2d626244 |
310 | if(!tree->GetTree()) { |
311 | Long64_t readEntry = tree->LoadTree(0); |
312 | if (readEntry == -2) { |
61505f8b |
313 | Error("Init", "Input tree has no entry. Exiting"); |
2d626244 |
314 | return kFALSE; |
315 | } |
316 | } |
36e82a52 |
317 | } |
318 | |
319 | if (fMCtruthEventHandler) { |
320 | if (fMode == kProofAnalysis) { |
2d626244 |
321 | init = fMCtruthEventHandler->Init(0x0, "proof"); |
36e82a52 |
322 | } else { |
2d626244 |
323 | init = fMCtruthEventHandler->Init(0x0, "local"); |
36e82a52 |
324 | } |
2d626244 |
325 | if (!init) { |
326 | Error("Init", "MC event handler failed to initialize"); |
327 | return kFALSE; |
328 | } |
fdb458ec |
329 | } |
330 | |
c52c2132 |
331 | if (!fInitOK) InitAnalysis(); |
2d626244 |
332 | if (!fInitOK) return kFALSE; |
327eaf46 |
333 | fTree = tree; |
012e169c |
334 | fTable.Rehash(100); |
ce46ecc1 |
335 | AliAnalysisDataContainer *top = fCommonInput; |
336 | if (!top) top = (AliAnalysisDataContainer*)fInputs->At(0); |
c52c2132 |
337 | if (!top) { |
8d7d3b59 |
338 | Error("Init","No top input container !"); |
2d626244 |
339 | return kFALSE; |
37153431 |
340 | } |
327eaf46 |
341 | top->SetData(tree); |
7acc5b9d |
342 | CheckBranches(kFALSE); |
cd463514 |
343 | if (fDebug > 1) { |
84fcd93f |
344 | printf("<-AliAnalysisManager::Init(%s)\n", tree->GetName()); |
981f2614 |
345 | } |
2d626244 |
346 | return kTRUE; |
d3106602 |
347 | } |
348 | |
349 | //______________________________________________________________________________ |
327eaf46 |
350 | void AliAnalysisManager::SlaveBegin(TTree *tree) |
d3106602 |
351 | { |
352 | // The SlaveBegin() function is called after the Begin() function. |
353 | // When running with PROOF SlaveBegin() is called on each slave server. |
354 | // The tree argument is deprecated (on PROOF 0 is passed). |
cd463514 |
355 | if (fDebug > 1) printf("->AliAnalysisManager::SlaveBegin()\n"); |
4747b4a7 |
356 | if (!CheckTasks()) Fatal("SlaveBegin", "Not all needed libraries were loaded"); |
aee5ee44 |
357 | static Bool_t isCalled = kFALSE; |
2d626244 |
358 | Bool_t init = kFALSE; |
359 | Bool_t initOK = kTRUE; |
360 | TString msg; |
4ab472d4 |
361 | TDirectory *curdir = gDirectory; |
aee5ee44 |
362 | // Call SlaveBegin only once in case of mixing |
363 | if (isCalled && fMode==kMixingAnalysis) return; |
979e448a |
364 | gROOT->cd(); |
f3d59a0d |
365 | // Call Init of EventHandler |
366 | if (fOutputEventHandler) { |
367 | if (fMode == kProofAnalysis) { |
673f68ff |
368 | // Merging AOD's in PROOF via TProofOutputFile |
84fcd93f |
369 | if (fDebug > 1) printf(" Initializing AOD output file %s...\n", fOutputEventHandler->GetOutputFileName()); |
673f68ff |
370 | init = fOutputEventHandler->Init("proof"); |
371 | if (!init) msg = "Failed to initialize output handler on worker"; |
f3d59a0d |
372 | } else { |
2d626244 |
373 | init = fOutputEventHandler->Init("local"); |
673f68ff |
374 | if (!init) msg = "Failed to initialize output handler"; |
f3d59a0d |
375 | } |
2d626244 |
376 | initOK &= init; |
377 | if (!fSelector) Error("SlaveBegin", "Selector not set"); |
378 | else if (!init) {fSelector->Abort(msg); fSelector->SetStatus(-1);} |
f3d59a0d |
379 | } |
979e448a |
380 | gROOT->cd(); |
f3d59a0d |
381 | if (fInputEventHandler) { |
382 | fInputEventHandler->SetInputTree(tree); |
383 | if (fMode == kProofAnalysis) { |
2d626244 |
384 | init = fInputEventHandler->Init("proof"); |
385 | if (!init) msg = "Failed to initialize input handler on worker"; |
f3d59a0d |
386 | } else { |
2d626244 |
387 | init = fInputEventHandler->Init("local"); |
388 | if (!init) msg = "Failed to initialize input handler"; |
f3d59a0d |
389 | } |
2d626244 |
390 | initOK &= init; |
391 | if (!fSelector) Error("SlaveBegin", "Selector not set"); |
392 | else if (!init) {fSelector->Abort(msg); fSelector->SetStatus(-1);} |
f3d59a0d |
393 | } |
979e448a |
394 | gROOT->cd(); |
f3d59a0d |
395 | if (fMCtruthEventHandler) { |
396 | if (fMode == kProofAnalysis) { |
2d626244 |
397 | init = fMCtruthEventHandler->Init("proof"); |
398 | if (!init) msg = "Failed to initialize MC handler on worker"; |
f3d59a0d |
399 | } else { |
2d626244 |
400 | init = fMCtruthEventHandler->Init("local"); |
401 | if (!init) msg = "Failed to initialize MC handler"; |
f3d59a0d |
402 | } |
2d626244 |
403 | initOK &= init; |
404 | if (!fSelector) Error("SlaveBegin", "Selector not set"); |
405 | else if (!init) {fSelector->Abort(msg); fSelector->SetStatus(-1);} |
f3d59a0d |
406 | } |
4ab472d4 |
407 | if (curdir) curdir->cd(); |
2d626244 |
408 | isCalled = kTRUE; |
409 | if (!initOK) return; |
c52c2132 |
410 | TIter next(fTasks); |
411 | AliAnalysisTask *task; |
412 | // Call CreateOutputObjects for all tasks |
096b5a2e |
413 | Bool_t getsysInfo = ((fNSysInfo>0) && (fMode==kLocalAnalysis))?kTRUE:kFALSE; |
979e448a |
414 | Bool_t dirStatus = TH1::AddDirectoryStatus(); |
096b5a2e |
415 | Int_t itask = 0; |
c5a87c56 |
416 | while ((task=(AliAnalysisTask*)next())) { |
979e448a |
417 | gROOT->cd(); |
418 | // Start with memory as current dir and make sure by default histograms do not get attached to files. |
419 | TH1::AddDirectory(kFALSE); |
c52c2132 |
420 | task->CreateOutputObjects(); |
4747b4a7 |
421 | if (!task->CheckPostData()) { |
422 | Error("SlaveBegin","####### IMPORTANT! ####### \n\n\n\ |
423 | Task %s (%s) did not call PostData() for all its outputs in (User)CreateOutputObjects()\n\n\ |
424 | ####### FIX YOUR CODE, THIS WILL PRODUCE A FATAL ERROR IN FUTURE! ##########", task->GetName(), task->ClassName()); |
425 | } |
096b5a2e |
426 | if (getsysInfo) AliSysInfo::AddStamp(Form("%s_CREATEOUTOBJ",task->ClassName()), 0, itask, 0); |
427 | itask++; |
36e82a52 |
428 | } |
979e448a |
429 | TH1::AddDirectory(dirStatus); |
430 | if (curdir) curdir->cd(); |
cd463514 |
431 | if (fDebug > 1) printf("<-AliAnalysisManager::SlaveBegin()\n"); |
d3106602 |
432 | } |
433 | |
434 | //______________________________________________________________________________ |
327eaf46 |
435 | Bool_t AliAnalysisManager::Notify() |
436 | { |
437 | // The Notify() function is called when a new file is opened. This |
438 | // can be either for a new TTree in a TChain or when when a new TTree |
439 | // is started when using PROOF. It is normaly not necessary to make changes |
440 | // to the generated code, but the routine can be extended by the |
441 | // user if needed. The return value is currently not used. |
2d626244 |
442 | if (!fTree) return kFALSE; |
20b7268e |
443 | if (!TObject::TestBit(AliAnalysisManager::kTrueNotify)) return kFALSE; |
012e169c |
444 | |
445 | fTable.Clear("nodelete"); // clearing the hash table may not be needed -> C.L. |
8e1f0465 |
446 | if (fMode == kProofAnalysis) fIsRemote = kTRUE; |
2d626244 |
447 | |
8d7d3b59 |
448 | TFile *curfile = fTree->GetCurrentFile(); |
449 | if (!curfile) { |
450 | Error("Notify","No current file"); |
451 | return kFALSE; |
452 | } |
453 | |
cd463514 |
454 | if (fDebug > 1) printf("->AliAnalysisManager::Notify() file: %s\n", curfile->GetName()); |
242accb2 |
455 | Int_t run = AliAnalysisManager::GetRunFromAlienPath(curfile->GetName()); |
20b7268e |
456 | if (run && (run != fRunFromPath)) { |
457 | fRunFromPath = run; |
458 | if (fDebug > 1) printf(" ### run found from path: %d\n", run); |
459 | } |
8d7d3b59 |
460 | TIter next(fTasks); |
461 | AliAnalysisTask *task; |
fdb458ec |
462 | |
8d7d3b59 |
463 | // Call Notify of the event handlers |
464 | if (fInputEventHandler) { |
465 | fInputEventHandler->Notify(curfile->GetName()); |
466 | } |
6073f8c9 |
467 | |
8d7d3b59 |
468 | if (fOutputEventHandler) { |
469 | fOutputEventHandler->Notify(curfile->GetName()); |
470 | } |
890126ab |
471 | |
8d7d3b59 |
472 | if (fMCtruthEventHandler) { |
473 | fMCtruthEventHandler->Notify(curfile->GetName()); |
474 | } |
012e169c |
475 | |
242accb2 |
476 | // Call Notify for all tasks |
477 | while ((task=(AliAnalysisTask*)next())) |
478 | task->Notify(); |
479 | |
cd463514 |
480 | if (fDebug > 1) printf("<-AliAnalysisManager::Notify()\n"); |
8d7d3b59 |
481 | return kTRUE; |
327eaf46 |
482 | } |
483 | |
484 | //______________________________________________________________________________ |
20b7268e |
485 | Bool_t AliAnalysisManager::Process(Long64_t) |
d3106602 |
486 | { |
487 | // The Process() function is called for each entry in the tree (or possibly |
488 | // keyed object in the case of PROOF) to be processed. The entry argument |
489 | // specifies which entry in the currently loaded tree is to be processed. |
490 | // It can be passed to either TTree::GetEntry() or TBranch::GetEntry() |
491 | // to read either all or the required parts of the data. When processing |
492 | // keyed objects with PROOF, the object is already loaded and is available |
493 | // via the fObject pointer. |
494 | // |
495 | // This function should contain the "body" of the analysis. It can contain |
496 | // simple or elaborate selection criteria, run algorithms on the data |
497 | // of the event and typically fill histograms. |
498 | |
499 | // WARNING when a selector is used with a TChain, you must use |
500 | // the pointer to the current TTree to call GetEntry(entry). |
501 | // The entry is always the local entry number in the current tree. |
502 | // Assuming that fChain is the pointer to the TChain being processed, |
503 | // use fChain->GetTree()->GetEntry(entry). |
0d6a82a5 |
504 | |
20b7268e |
505 | // This method is obsolete. ExecAnalysis is called instead. |
327eaf46 |
506 | return kTRUE; |
d3106602 |
507 | } |
508 | |
509 | //______________________________________________________________________________ |
c52c2132 |
510 | void AliAnalysisManager::PackOutput(TList *target) |
d3106602 |
511 | { |
981f2614 |
512 | // Pack all output data containers in the output list. Called at SlaveTerminate |
513 | // stage in PROOF case for each slave. |
cd463514 |
514 | if (fDebug > 1) printf("->AliAnalysisManager::PackOutput()\n"); |
c52c2132 |
515 | if (!target) { |
61505f8b |
516 | Error("PackOutput", "No target. Exiting."); |
c52c2132 |
517 | return; |
37153431 |
518 | } |
57756ec5 |
519 | TDirectory *cdir = gDirectory; |
520 | gROOT->cd(); |
6073f8c9 |
521 | if (fInputEventHandler) fInputEventHandler ->Terminate(); |
6bb2b24f |
522 | if (fOutputEventHandler) fOutputEventHandler ->Terminate(); |
523 | if (fMCtruthEventHandler) fMCtruthEventHandler->Terminate(); |
57756ec5 |
524 | gROOT->cd(); |
8d7d3b59 |
525 | |
526 | // Call FinishTaskOutput() for each event loop task (not called for |
527 | // post-event loop tasks - use Terminate() fo those) |
528 | TIter nexttask(fTasks); |
529 | AliAnalysisTask *task; |
530 | while ((task=(AliAnalysisTask*)nexttask())) { |
531 | if (!task->IsPostEventLoop()) { |
cd463514 |
532 | if (fDebug > 1) printf("->FinishTaskOutput: task %s\n", task->GetName()); |
8d7d3b59 |
533 | task->FinishTaskOutput(); |
57756ec5 |
534 | gROOT->cd(); |
cd463514 |
535 | if (fDebug > 1) printf("<-FinishTaskOutput: task %s\n", task->GetName()); |
8d7d3b59 |
536 | } |
e9247450 |
537 | } |
538 | // Write statistics message on the workers. |
e296c79c |
539 | if (fStatistics) WriteStatisticsMsg(fNcalls); |
8c9485b2 |
540 | |
c52c2132 |
541 | if (fMode == kProofAnalysis) { |
542 | TIter next(fOutputs); |
543 | AliAnalysisDataContainer *output; |
4ab472d4 |
544 | Bool_t isManagedByHandler = kFALSE; |
ab5d25d8 |
545 | TList filestmp; |
546 | filestmp.SetOwner(); |
c52c2132 |
547 | while ((output=(AliAnalysisDataContainer*)next())) { |
8d7d3b59 |
548 | // Do not consider outputs of post event loop tasks |
2b83ca27 |
549 | isManagedByHandler = kFALSE; |
1c5dff85 |
550 | if (output->GetProducer() && output->GetProducer()->IsPostEventLoop()) continue; |
4ab472d4 |
551 | const char *filename = output->GetFileName(); |
552 | if (!(strcmp(filename, "default")) && fOutputEventHandler) { |
553 | isManagedByHandler = kTRUE; |
84fcd93f |
554 | printf("#### Handler output. Extra: %s\n", fExtraFiles.Data()); |
4ab472d4 |
555 | filename = fOutputEventHandler->GetOutputFileName(); |
556 | } |
8d7d3b59 |
557 | // Check if data was posted to this container. If not, issue an error. |
4ab472d4 |
558 | if (!output->GetData() && !isManagedByHandler) { |
923e2ca5 |
559 | Error("PackOutput", "No data for output container %s. Forgot to PostData ?", output->GetName()); |
8d7d3b59 |
560 | continue; |
561 | } |
562 | if (!output->IsSpecialOutput()) { |
563 | // Normal outputs |
4ab472d4 |
564 | if (strlen(filename) && !isManagedByHandler) { |
8d7d3b59 |
565 | // Backup current folder |
ca78991b |
566 | TDirectory *opwd = gDirectory; |
f2087b52 |
567 | // File resident outputs. |
568 | // Check first if the file exists. |
61505f8b |
569 | TString openoption = "RECREATE"; |
ab5d25d8 |
570 | Bool_t firsttime = kTRUE; |
571 | if (filestmp.FindObject(output->GetFileName())) { |
572 | firsttime = kFALSE; |
573 | } else { |
574 | filestmp.Add(new TNamed(output->GetFileName(),"")); |
575 | } |
576 | if (!gSystem->AccessPathName(output->GetFileName()) && !firsttime) openoption = "UPDATE"; |
577 | // TFile *file = AliAnalysisManager::OpenFile(output, openoption, kTRUE); |
8d7d3b59 |
578 | // Save data to file, then close. |
1be433fc |
579 | if (output->GetData()->InheritsFrom(TCollection::Class())) { |
580 | // If data is a collection, we set the name of the collection |
581 | // as the one of the container and we save as a single key. |
582 | TCollection *coll = (TCollection*)output->GetData(); |
583 | coll->SetName(output->GetName()); |
ab5d25d8 |
584 | // coll->Write(output->GetName(), TObject::kSingleKey); |
1be433fc |
585 | } else { |
cbc8747a |
586 | if (output->GetData()->InheritsFrom(TTree::Class())) { |
ab5d25d8 |
587 | TFile *file = AliAnalysisManager::OpenFile(output, openoption, kTRUE); |
588 | // Save data to file, then close. |
cbc8747a |
589 | TTree *tree = (TTree*)output->GetData(); |
57756ec5 |
590 | // Check if tree is in memory |
591 | if (tree->GetDirectory()==gROOT) tree->SetDirectory(gDirectory); |
cbc8747a |
592 | tree->AutoSave(); |
ab5d25d8 |
593 | file->Close(); |
cbc8747a |
594 | } else { |
ab5d25d8 |
595 | // output->GetData()->Write(); |
cbc8747a |
596 | } |
1be433fc |
597 | } |
84fcd93f |
598 | if (fDebug > 1) printf("PackOutput %s: memory merge, file resident output\n", output->GetName()); |
ab5d25d8 |
599 | // if (fDebug > 2) { |
600 | // printf(" file %s listing content:\n", filename); |
601 | // file->ls(); |
602 | // } |
f3c07fbd |
603 | // Clear file list to release object ownership to user. |
160e7161 |
604 | // file->Clear(); |
ab5d25d8 |
605 | // file->Close(); |
84fcd93f |
606 | output->SetFile(NULL); |
ca78991b |
607 | // Restore current directory |
608 | if (opwd) opwd->cd(); |
8d7d3b59 |
609 | } else { |
610 | // Memory-resident outputs |
84fcd93f |
611 | if (fDebug > 1) printf("PackOutput %s: memory merge memory resident output\n", filename); |
4ab472d4 |
612 | } |
613 | AliAnalysisDataWrapper *wrap = 0; |
614 | if (isManagedByHandler) { |
615 | wrap = new AliAnalysisDataWrapper(fOutputEventHandler->GetTree()); |
616 | wrap->SetName(output->GetName()); |
ca78991b |
617 | } |
4ab472d4 |
618 | else wrap =output->ExportData(); |
cbc8747a |
619 | // Output wrappers must NOT delete data after merging - the user owns them |
620 | wrap->SetDeleteData(kFALSE); |
8167b1d0 |
621 | target->Add(wrap); |
4ab472d4 |
622 | } else { |
f5e61abd |
623 | // Special outputs. The file must be opened and connected to the container. |
d0864eb4 |
624 | TDirectory *opwd = gDirectory; |
8d7d3b59 |
625 | TFile *file = output->GetFile(); |
f5e61abd |
626 | if (!file) { |
627 | AliAnalysisTask *producer = output->GetProducer(); |
84fcd93f |
628 | Fatal("PackOutput", |
f5e61abd |
629 | "File %s for special container %s was NOT opened in %s::CreateOutputObjects !!!", |
630 | output->GetFileName(), output->GetName(), producer->ClassName()); |
631 | continue; |
632 | } |
633 | TString outFilename = file->GetName(); |
84fcd93f |
634 | if (fDebug > 1) printf("PackOutput %s: special output\n", output->GetName()); |
4ab472d4 |
635 | if (isManagedByHandler) { |
636 | // Terminate IO for files managed by the output handler |
aa399a26 |
637 | // file->Write() moved to AOD handler (A.G. 11.01.10) |
638 | // if (file) file->Write(); |
802f90ef |
639 | if (file && fDebug > 2) { |
84fcd93f |
640 | printf(" handled file %s listing content:\n", file->GetName()); |
802f90ef |
641 | file->ls(); |
642 | } |
4ab472d4 |
643 | fOutputEventHandler->TerminateIO(); |
f5e61abd |
644 | } else { |
645 | file->cd(); |
646 | // Release object ownership to users after writing data to file |
647 | if (output->GetData()->InheritsFrom(TCollection::Class())) { |
648 | // If data is a collection, we set the name of the collection |
649 | // as the one of the container and we save as a single key. |
650 | TCollection *coll = (TCollection*)output->GetData(); |
651 | coll->SetName(output->GetName()); |
652 | coll->Write(output->GetName(), TObject::kSingleKey); |
cbc8747a |
653 | } else { |
f5e61abd |
654 | if (output->GetData()->InheritsFrom(TTree::Class())) { |
655 | TTree *tree = (TTree*)output->GetData(); |
656 | tree->SetDirectory(file); |
657 | tree->AutoSave(); |
658 | } else { |
659 | output->GetData()->Write(); |
660 | } |
661 | } |
f5e61abd |
662 | if (fDebug > 2) { |
84fcd93f |
663 | printf(" file %s listing content:\n", output->GetFileName()); |
f5e61abd |
664 | file->ls(); |
665 | } |
f3c07fbd |
666 | // Clear file list to release object ownership to user. |
160e7161 |
667 | // file->Clear(); |
f5e61abd |
668 | file->Close(); |
84fcd93f |
669 | output->SetFile(NULL); |
ef73322e |
670 | } |
8d7d3b59 |
671 | // Restore current directory |
d0864eb4 |
672 | if (opwd) opwd->cd(); |
8d7d3b59 |
673 | // Check if a special output location was provided or the output files have to be merged |
13ef3bb0 |
674 | if (strlen(fSpecialOutputLocation.Data())) { |
675 | TString remote = fSpecialOutputLocation; |
676 | remote += "/"; |
ef788aee |
677 | Int_t gid = gROOT->ProcessLine("gProofServ->GetGroupId();"); |
3bdcb562 |
678 | if (remote.BeginsWith("alien:")) { |
679 | gROOT->ProcessLine("TGrid::Connect(\"alien:\", gProofServ->GetUser());"); |
f5e61abd |
680 | remote += outFilename; |
681 | remote.ReplaceAll(".root", Form("_%d.root", gid)); |
682 | } else { |
683 | remote += Form("%s_%d_", gSystem->HostName(), gid); |
684 | remote += outFilename; |
685 | } |
686 | if (fDebug > 1) |
687 | Info("PackOutput", "Output file for container %s to be copied \n at: %s. No merging.", |
688 | output->GetName(), remote.Data()); |
ef73322e |
689 | TFile::Cp ( outFilename.Data(), remote.Data() ); |
c9e39043 |
690 | // Copy extra outputs |
691 | if (fExtraFiles.Length() && isManagedByHandler) { |
692 | TObjArray *arr = fExtraFiles.Tokenize(" "); |
693 | TObjString *os; |
694 | TIter nextfilename(arr); |
695 | while ((os=(TObjString*)nextfilename())) { |
696 | outFilename = os->GetString(); |
697 | remote = fSpecialOutputLocation; |
698 | remote += "/"; |
699 | if (remote.BeginsWith("alien://")) { |
700 | remote += outFilename; |
701 | remote.ReplaceAll(".root", Form("_%d.root", gid)); |
702 | } else { |
703 | remote += Form("%s_%d_", gSystem->HostName(), gid); |
704 | remote += outFilename; |
705 | } |
706 | if (fDebug > 1) |
707 | Info("PackOutput", "Extra AOD file %s to be copied \n at: %s. No merging.", |
708 | outFilename.Data(), remote.Data()); |
709 | TFile::Cp ( outFilename.Data(), remote.Data() ); |
710 | } |
711 | delete arr; |
712 | } |
ca78991b |
713 | } else { |
8d7d3b59 |
714 | // No special location specified-> use TProofOutputFile as merging utility |
715 | // The file at this output slot must be opened in CreateOutputObjects |
84fcd93f |
716 | if (fDebug > 1) printf(" File for container %s to be merged via file merger...\n", output->GetName()); |
13ef3bb0 |
717 | } |
718 | } |
c52c2132 |
719 | } |
720 | } |
57756ec5 |
721 | cdir->cd(); |
cd463514 |
722 | if (fDebug > 1) printf("<-AliAnalysisManager::PackOutput: output list contains %d containers\n", target->GetSize()); |
c52c2132 |
723 | } |
724 | |
725 | //______________________________________________________________________________ |
981f2614 |
726 | void AliAnalysisManager::ImportWrappers(TList *source) |
c52c2132 |
727 | { |
981f2614 |
728 | // Import data in output containers from wrappers coming in source. |
cd463514 |
729 | if (fDebug > 1) printf("->AliAnalysisManager::ImportWrappers()\n"); |
327eaf46 |
730 | TIter next(fOutputs); |
981f2614 |
731 | AliAnalysisDataContainer *cont; |
732 | AliAnalysisDataWrapper *wrap; |
733 | Int_t icont = 0; |
c57f56b7 |
734 | Bool_t inGrid = (fMode == kGridAnalysis)?kTRUE:kFALSE; |
84fcd93f |
735 | TDirectory *cdir = gDirectory; |
c52c2132 |
736 | while ((cont=(AliAnalysisDataContainer*)next())) { |
0355fc48 |
737 | wrap = 0; |
f3c07fbd |
738 | if (cont->GetProducer() && cont->GetProducer()->IsPostEventLoop() && !inGrid) continue; |
90a4b3ee |
739 | if (cont->IsRegisterDataset()) continue; |
4ab472d4 |
740 | const char *filename = cont->GetFileName(); |
741 | Bool_t isManagedByHandler = kFALSE; |
742 | if (!(strcmp(filename, "default")) && fOutputEventHandler) { |
743 | isManagedByHandler = kTRUE; |
744 | filename = fOutputEventHandler->GetOutputFileName(); |
745 | } |
c57f56b7 |
746 | if (cont->IsSpecialOutput() || inGrid) { |
f5e61abd |
747 | if (strlen(fSpecialOutputLocation.Data())) continue; |
c57f56b7 |
748 | // Copy merged file from PROOF scratch space. |
749 | // In case of grid the files are already in the current directory. |
750 | if (!inGrid) { |
c07b9ce2 |
751 | if (isManagedByHandler && fExtraFiles.Length()) { |
752 | // Copy extra registered dAOD files. |
753 | TObjArray *arr = fExtraFiles.Tokenize(" "); |
754 | TObjString *os; |
755 | TIter nextfilename(arr); |
756 | while ((os=(TObjString*)nextfilename())) GetFileFromWrapper(os->GetString(), source); |
757 | delete arr; |
c57f56b7 |
758 | } |
c07b9ce2 |
759 | if (!GetFileFromWrapper(filename, source)) continue; |
c57f56b7 |
760 | } |
8d7d3b59 |
761 | // Normally we should connect data from the copied file to the |
762 | // corresponding output container, but it is not obvious how to do this |
763 | // automatically if several objects in file... |
84fcd93f |
764 | TFile *f = (TFile*)gROOT->GetListOfFiles()->FindObject(filename); |
765 | if (!f) f = TFile::Open(filename, "READ"); |
dd197a68 |
766 | if (!f) { |
767 | Error("ImportWrappers", "Cannot open file %s in read-only mode", filename); |
0355fc48 |
768 | continue; |
dd197a68 |
769 | } |
dd151ce7 |
770 | f->cd(); |
dd197a68 |
771 | TObject *obj = 0; |
84fcd93f |
772 | // Cd to the directory pointed by the container |
773 | TString folder = cont->GetFolderName(); |
774 | if (!folder.IsNull()) f->cd(folder); |
775 | // Try to fetch first an object having the container name. |
776 | obj = gDirectory->Get(cont->GetName()); |
dd197a68 |
777 | if (!obj) { |
c7597be6 |
778 | Warning("ImportWrappers", "Could not import object of type:%s for container %s in file %s:%s.\n Object will not be available in Terminate(). Try if possible to name the output object as the container (%s) or to embed it in a TList", |
779 | cont->GetType()->GetName(), cont->GetName(), filename, cont->GetFolderName(), cont->GetName()); |
dd197a68 |
780 | continue; |
781 | } |
0355fc48 |
782 | wrap = new AliAnalysisDataWrapper(obj); |
783 | wrap->SetDeleteData(kFALSE); |
8d7d3b59 |
784 | } |
0355fc48 |
785 | if (!wrap) wrap = (AliAnalysisDataWrapper*)source->FindObject(cont->GetName()); |
8d7d3b59 |
786 | if (!wrap) { |
787 | Error("ImportWrappers","Container %s not found in analysis output !", cont->GetName()); |
c52c2132 |
788 | continue; |
789 | } |
981f2614 |
790 | icont++; |
8d7d3b59 |
791 | if (fDebug > 1) { |
84fcd93f |
792 | printf(" Importing data for container %s\n", cont->GetName()); |
793 | if (strlen(filename)) printf(" -> file %s\n", filename); |
794 | else printf("\n"); |
8d7d3b59 |
795 | } |
981f2614 |
796 | cont->ImportData(wrap); |
84fcd93f |
797 | } |
798 | if (cdir) cdir->cd(); |
cd463514 |
799 | if (fDebug > 1) printf("<-AliAnalysisManager::ImportWrappers(): %d containers imported\n", icont); |
c52c2132 |
800 | } |
801 | |
802 | //______________________________________________________________________________ |
803 | void AliAnalysisManager::UnpackOutput(TList *source) |
804 | { |
ca78991b |
805 | // Called by AliAnalysisSelector::Terminate only on the client. |
cd463514 |
806 | if (fDebug > 1) printf("->AliAnalysisManager::UnpackOutput()\n"); |
c52c2132 |
807 | if (!source) { |
61505f8b |
808 | Error("UnpackOutput", "No target. Exiting."); |
c52c2132 |
809 | return; |
810 | } |
84fcd93f |
811 | if (fDebug > 1) printf(" Source list contains %d containers\n", source->GetSize()); |
c52c2132 |
812 | |
981f2614 |
813 | if (fMode == kProofAnalysis) ImportWrappers(source); |
37153431 |
814 | |
981f2614 |
815 | TIter next(fOutputs); |
c52c2132 |
816 | AliAnalysisDataContainer *output; |
817 | while ((output=(AliAnalysisDataContainer*)next())) { |
c52c2132 |
818 | if (!output->GetData()) continue; |
b1310ef5 |
819 | // Check if there are client tasks that run post event loop |
820 | if (output->HasConsumers()) { |
821 | // Disable event loop semaphore |
822 | output->SetPostEventLoop(kTRUE); |
823 | TObjArray *list = output->GetConsumers(); |
824 | Int_t ncons = list->GetEntriesFast(); |
825 | for (Int_t i=0; i<ncons; i++) { |
826 | AliAnalysisTask *task = (AliAnalysisTask*)list->At(i); |
827 | task->CheckNotify(kTRUE); |
828 | // If task is active, execute it |
829 | if (task->IsPostEventLoop() && task->IsActive()) { |
cd463514 |
830 | if (fDebug > 1) printf("== Executing post event loop task %s\n", task->GetName()); |
b1310ef5 |
831 | task->ExecuteTask(); |
832 | } |
833 | } |
834 | } |
c52c2132 |
835 | } |
cd463514 |
836 | if (fDebug > 1) printf("<-AliAnalysisManager::UnpackOutput()\n"); |
d3106602 |
837 | } |
838 | |
839 | //______________________________________________________________________________ |
840 | void AliAnalysisManager::Terminate() |
841 | { |
842 | // The Terminate() function is the last function to be called during |
843 | // a query. It always runs on the client, it can be used to present |
c52c2132 |
844 | // the results graphically. |
cd463514 |
845 | if (fDebug > 1) printf("->AliAnalysisManager::Terminate()\n"); |
57756ec5 |
846 | TDirectory *cdir = gDirectory; |
847 | gROOT->cd(); |
327eaf46 |
848 | AliAnalysisTask *task; |
a0e2e8b1 |
849 | AliAnalysisDataContainer *output; |
c52c2132 |
850 | TIter next(fTasks); |
a0e2e8b1 |
851 | TStopwatch timer; |
096b5a2e |
852 | Bool_t getsysInfo = ((fNSysInfo>0) && (fMode==kLocalAnalysis))?kTRUE:kFALSE; |
327eaf46 |
853 | // Call Terminate() for tasks |
096b5a2e |
854 | Int_t itask = 0; |
90a4b3ee |
855 | while (!IsSkipTerminate() && (task=(AliAnalysisTask*)next())) { |
a0e2e8b1 |
856 | // Save all the canvases produced by the Terminate |
857 | TString pictname = Form("%s_%s", task->GetName(), task->ClassName()); |
a0e2e8b1 |
858 | task->Terminate(); |
57756ec5 |
859 | gROOT->cd(); |
096b5a2e |
860 | if (getsysInfo) |
861 | AliSysInfo::AddStamp(Form("%s_TERMINATE",task->ClassName()),0, itask, 2); |
862 | itask++; |
a0e2e8b1 |
863 | if (TObject::TestBit(kSaveCanvases)) { |
226abfec |
864 | if (!gROOT->IsBatch()) { |
8e1f0465 |
865 | if (fDebug>1) printf("Waiting 5 sec for %s::Terminate() to finish drawing ...\n", task->ClassName()); |
226abfec |
866 | timer.Start(); |
867 | while (timer.CpuTime()<5) { |
868 | timer.Continue(); |
869 | gSystem->ProcessEvents(); |
870 | } |
871 | } |
872 | Int_t iend = gROOT->GetListOfCanvases()->GetEntries(); |
873 | if (iend==0) continue; |
a0e2e8b1 |
874 | TCanvas *canvas; |
226abfec |
875 | for (Int_t ipict=0; ipict<iend; ipict++) { |
876 | canvas = (TCanvas*)gROOT->GetListOfCanvases()->At(ipict); |
a0e2e8b1 |
877 | if (!canvas) continue; |
878 | canvas->SaveAs(Form("%s_%02d.gif", pictname.Data(),ipict)); |
226abfec |
879 | } |
880 | gROOT->GetListOfCanvases()->Delete(); |
a0e2e8b1 |
881 | } |
882 | } |
8c9485b2 |
883 | // |
aa399a26 |
884 | if (fInputEventHandler) fInputEventHandler ->TerminateIO(); |
885 | if (fOutputEventHandler) fOutputEventHandler ->TerminateIO(); |
886 | if (fMCtruthEventHandler) fMCtruthEventHandler->TerminateIO(); |
57756ec5 |
887 | gROOT->cd(); |
6cd44ee0 |
888 | TObjArray *allOutputs = new TObjArray(); |
889 | Int_t icont; |
890 | for (icont=0; icont<fOutputs->GetEntriesFast(); icont++) allOutputs->Add(fOutputs->At(icont)); |
891 | if (!IsSkipTerminate()) |
892 | for (icont=0; icont<fParamCont->GetEntriesFast(); icont++) allOutputs->Add(fParamCont->At(icont)); |
893 | TIter next1(allOutputs); |
f2087b52 |
894 | TString handlerFile = ""; |
90d50a8c |
895 | TString extraOutputs = ""; |
f2087b52 |
896 | if (fOutputEventHandler) { |
897 | handlerFile = fOutputEventHandler->GetOutputFileName(); |
90d50a8c |
898 | extraOutputs = fOutputEventHandler->GetExtraOutputs(); |
f2087b52 |
899 | } |
e16a394c |
900 | icont = 0; |
ab5d25d8 |
901 | TList filestmp; |
8c0ab8e8 |
902 | while ((output=(AliAnalysisDataContainer*)next1())) { |
c57f56b7 |
903 | // Special outputs or grid files have the files already closed and written. |
e16a394c |
904 | icont++; |
905 | if (fMode == kGridAnalysis && icont<=fOutputs->GetEntriesFast()) continue; |
90a4b3ee |
906 | if (fMode == kProofAnalysis) { |
907 | if (output->IsSpecialOutput() || output->IsRegisterDataset()) continue; |
908 | } |
8c0ab8e8 |
909 | const char *filename = output->GetFileName(); |
61505f8b |
910 | TString openoption = "RECREATE"; |
aa399a26 |
911 | if (!(strcmp(filename, "default"))) continue; |
8d7d3b59 |
912 | if (!strlen(filename)) continue; |
1be433fc |
913 | if (!output->GetData()) continue; |
8d7d3b59 |
914 | TDirectory *opwd = gDirectory; |
84fcd93f |
915 | TFile *file = output->GetFile(); |
916 | if (!file) file = (TFile*)gROOT->GetListOfFiles()->FindObject(filename); |
f2087b52 |
917 | if (!file) { |
61505f8b |
918 | //if (handlerFile == filename && !gSystem->AccessPathName(filename)) openoption = "UPDATE"; |
ab5d25d8 |
919 | Bool_t firsttime = kTRUE; |
90d50a8c |
920 | if (filestmp.FindObject(filename) || extraOutputs.Contains(filename)) { |
ab5d25d8 |
921 | firsttime = kFALSE; |
922 | } else { |
923 | filestmp.Add(new TNamed(filename,"")); |
924 | } |
925 | if (!gSystem->AccessPathName(filename) && !firsttime) openoption = "UPDATE"; |
cd463514 |
926 | if (fDebug>1) printf("Opening file: %s option=%s\n",filename, openoption.Data()); |
61505f8b |
927 | file = new TFile(filename, openoption); |
6cd44ee0 |
928 | } else { |
cd463514 |
929 | if (fDebug>1) printf("File <%s> already opened with option: <%s> \n", filename, file->GetOption()); |
ff07ec61 |
930 | openoption = file->GetOption(); |
931 | if (openoption == "READ") { |
cd463514 |
932 | if (fDebug>1) printf("...reopening in UPDATE mode\n"); |
ff07ec61 |
933 | file->ReOpen("UPDATE"); |
934 | } |
6cd44ee0 |
935 | } |
84fcd93f |
936 | if (file->IsZombie()) { |
937 | Error("Terminate", "Cannot open output file %s", filename); |
938 | continue; |
939 | } |
8e6e6fe8 |
940 | output->SetFile(file); |
941 | file->cd(); |
84fcd93f |
942 | // Check for a folder request |
943 | TString dir = output->GetFolderName(); |
944 | if (!dir.IsNull()) { |
945 | if (!file->GetDirectory(dir)) file->mkdir(dir); |
946 | file->cd(dir); |
947 | } |
cd463514 |
948 | if (fDebug > 1) printf("...writing container %s to file %s:%s\n", output->GetName(), file->GetName(), output->GetFolderName()); |
1be433fc |
949 | if (output->GetData()->InheritsFrom(TCollection::Class())) { |
950 | // If data is a collection, we set the name of the collection |
951 | // as the one of the container and we save as a single key. |
952 | TCollection *coll = (TCollection*)output->GetData(); |
953 | coll->SetName(output->GetName()); |
954 | coll->Write(output->GetName(), TObject::kSingleKey); |
955 | } else { |
cbc8747a |
956 | if (output->GetData()->InheritsFrom(TTree::Class())) { |
957 | TTree *tree = (TTree*)output->GetData(); |
7a151c06 |
958 | tree->SetDirectory(gDirectory); |
cbc8747a |
959 | tree->AutoSave(); |
960 | } else { |
961 | output->GetData()->Write(); |
962 | } |
1be433fc |
963 | } |
8e6e6fe8 |
964 | if (opwd) opwd->cd(); |
57756ec5 |
965 | } |
966 | gROOT->cd(); |
8e6e6fe8 |
967 | next1.Reset(); |
968 | while ((output=(AliAnalysisDataContainer*)next1())) { |
969 | // Close all files at output |
970 | TDirectory *opwd = gDirectory; |
f5e61abd |
971 | if (output->GetFile()) { |
f3c07fbd |
972 | // Clear file list to release object ownership to user. |
160e7161 |
973 | // output->GetFile()->Clear(); |
f5e61abd |
974 | output->GetFile()->Close(); |
975 | // Copy merged outputs in alien if requested |
976 | if (fSpecialOutputLocation.Length() && |
977 | fSpecialOutputLocation.BeginsWith("alien://")) { |
978 | Info("Terminate", "Copy file %s to %s", output->GetFile()->GetName(),fSpecialOutputLocation.Data()); |
77dad4a9 |
979 | gROOT->ProcessLine("if (!gGrid) TGrid::Connect(\"alien:\");"); |
f5e61abd |
980 | TFile::Cp(output->GetFile()->GetName(), |
981 | Form("%s/%s", fSpecialOutputLocation.Data(), output->GetFile()->GetName())); |
982 | } |
77dad4a9 |
983 | output->SetFile(NULL); |
f5e61abd |
984 | } |
8d7d3b59 |
985 | if (opwd) opwd->cd(); |
8c0ab8e8 |
986 | } |
6cd44ee0 |
987 | delete allOutputs; |
e9247450 |
988 | //Write statistics information on the client |
e296c79c |
989 | if (fStatistics) WriteStatisticsMsg(fNcalls); |
8c0ab8e8 |
990 | if (getsysInfo) { |
b6db1d18 |
991 | TDirectory *crtdir = gDirectory; |
8c0ab8e8 |
992 | TFile f("syswatch.root", "RECREATE"); |
096b5a2e |
993 | TH1 *hist; |
994 | TString cut; |
8c0ab8e8 |
995 | if (!f.IsZombie()) { |
996 | TTree *tree = AliSysInfo::MakeTree("syswatch.log"); |
096b5a2e |
997 | tree->SetName("syswatch"); |
8c0ab8e8 |
998 | tree->SetMarkerStyle(kCircle); |
999 | tree->SetMarkerColor(kBlue); |
1000 | tree->SetMarkerSize(0.5); |
1001 | if (!gROOT->IsBatch()) { |
1002 | tree->SetAlias("event", "id0"); |
096b5a2e |
1003 | tree->SetAlias("task", "id1"); |
1004 | tree->SetAlias("stage", "id2"); |
1005 | // Already defined aliases |
1006 | // tree->SetAlias("deltaT","stampSec-stampOldSec"); |
1007 | // tree->SetAlias("T","stampSec-first"); |
1008 | // tree->SetAlias("deltaVM","(pI.fMemVirtual-pIOld.fMemVirtual)"); |
1009 | // tree->SetAlias("VM","pI.fMemVirtual"); |
1010 | TCanvas *canvas = new TCanvas("SysInfo","SysInfo",10,10,1200,800); |
1011 | Int_t npads = 1 /*COO plot for all tasks*/ + |
1012 | fTopTasks->GetEntries() /*Exec plot per task*/ + |
1013 | 1 /*Terminate plot for all tasks*/ + |
1014 | 1; /*vm plot*/ |
1015 | |
1016 | Int_t iopt = (Int_t)TMath::Sqrt((Double_t)npads); |
1017 | if (npads<iopt*(iopt+1)) |
1018 | canvas->Divide(iopt, iopt+1, 0.01, 0.01); |
1019 | else |
1020 | canvas->Divide(iopt+1, iopt+1, 0.01, 0.01); |
1021 | Int_t ipad = 1; |
1022 | // draw the plot of deltaVM for Exec for each task |
779e9992 |
1023 | for (itask=0; itask<fTopTasks->GetEntriesFast(); itask++) { |
096b5a2e |
1024 | task = (AliAnalysisTask*)fTopTasks->At(itask); |
1025 | canvas->cd(ipad++); |
1026 | cut = Form("task==%d && stage==1", itask); |
1027 | tree->Draw("deltaVM:event",cut,"", 1234567890, 0); |
1028 | hist = (TH1*)gPad->GetListOfPrimitives()->FindObject("htemp"); |
1029 | if (hist) { |
084c84df |
1030 | hist->SetTitle(Form("%s: Exec dVM[MB]/event", task->GetName())); |
b3e07543 |
1031 | hist->GetYaxis()->SetTitle("deltaVM [MB]"); |
096b5a2e |
1032 | } |
1033 | } |
1034 | // Draw the plot of deltaVM for CreateOutputObjects for all tasks |
1035 | canvas->cd(ipad++); |
1036 | tree->SetMarkerStyle(kFullTriangleUp); |
1037 | tree->SetMarkerColor(kRed); |
1038 | tree->SetMarkerSize(0.8); |
1039 | cut = "task>=0 && task<1000 && stage==0"; |
1040 | tree->Draw("deltaVM:sname",cut,"", 1234567890, 0); |
1041 | hist = (TH1*)gPad->GetListOfPrimitives()->FindObject("htemp"); |
1042 | if (hist) { |
1043 | hist->SetTitle("Memory in CreateOutputObjects()"); |
b3e07543 |
1044 | hist->GetYaxis()->SetTitle("deltaVM [MB]"); |
096b5a2e |
1045 | hist->GetXaxis()->SetTitle("task"); |
1046 | } |
1047 | // draw the plot of deltaVM for Terminate for all tasks |
1048 | canvas->cd(ipad++); |
1049 | tree->SetMarkerStyle(kOpenSquare); |
1050 | tree->SetMarkerColor(kMagenta); |
1051 | cut = "task>=0 && task<1000 && stage==2"; |
1052 | tree->Draw("deltaVM:sname",cut,"", 1234567890, 0); |
1053 | hist = (TH1*)gPad->GetListOfPrimitives()->FindObject("htemp"); |
1054 | if (hist) { |
1055 | hist->SetTitle("Memory in Terminate()"); |
b3e07543 |
1056 | hist->GetYaxis()->SetTitle("deltaVM [MB]"); |
096b5a2e |
1057 | hist->GetXaxis()->SetTitle("task"); |
1058 | } |
1059 | // Full VM profile |
1060 | canvas->cd(ipad++); |
1061 | tree->SetMarkerStyle(kFullCircle); |
1062 | tree->SetMarkerColor(kGreen); |
1063 | cut = Form("task==%d && stage==1",fTopTasks->GetEntriesFast()-1); |
1064 | tree->Draw("VM:event",cut,"", 1234567890, 0); |
1065 | hist = (TH1*)gPad->GetListOfPrimitives()->FindObject("htemp"); |
1066 | if (hist) { |
1067 | hist->SetTitle("Virtual memory"); |
b3e07543 |
1068 | hist->GetYaxis()->SetTitle("VM [MB]"); |
096b5a2e |
1069 | } |
1070 | canvas->Modified(); |
8c0ab8e8 |
1071 | } |
096b5a2e |
1072 | tree->SetMarkerStyle(kCircle); |
1073 | tree->SetMarkerColor(kBlue); |
1074 | tree->SetMarkerSize(0.5); |
8c0ab8e8 |
1075 | tree->Write(); |
1076 | f.Close(); |
1077 | delete tree; |
1078 | } |
b6db1d18 |
1079 | if (crtdir) crtdir->cd(); |
923e2ca5 |
1080 | } |
1081 | // Validate the output files |
f62a0e4c |
1082 | if (ValidateOutputFiles() && fIsRemote && fMode!=kProofAnalysis) { |
923e2ca5 |
1083 | ofstream out; |
1084 | out.open("outputs_valid", ios::out); |
1085 | out.close(); |
57756ec5 |
1086 | } |
1087 | cdir->cd(); |
cd463514 |
1088 | if (fDebug > 1) printf("<-AliAnalysisManager::Terminate()\n"); |
d3106602 |
1089 | } |
096b5a2e |
1090 | //______________________________________________________________________________ |
1091 | void AliAnalysisManager::ProfileTask(Int_t itop, const char *option) const |
1092 | { |
1093 | // Profiles the task having the itop index in the list of top (first level) tasks. |
1094 | AliAnalysisTask *task = (AliAnalysisTask*)fTopTasks->At(itop); |
1095 | if (!task) { |
1096 | Error("ProfileTask", "There are only %d top tasks in the manager", fTopTasks->GetEntries()); |
1097 | return; |
1098 | } |
1099 | ProfileTask(task->GetName(), option); |
1100 | } |
1101 | |
1102 | //______________________________________________________________________________ |
1103 | void AliAnalysisManager::ProfileTask(const char *name, const char */*option*/) const |
1104 | { |
1105 | // Profile a managed task after the execution of the analysis in case NSysInfo |
1106 | // was used. |
1107 | if (gSystem->AccessPathName("syswatch.root")) { |
1108 | Error("ProfileTask", "No file syswatch.root found in the current directory"); |
1109 | return; |
1110 | } |
1111 | if (gROOT->IsBatch()) return; |
1112 | AliAnalysisTask *task = (AliAnalysisTask*)fTopTasks->FindObject(name); |
1113 | if (!task) { |
1114 | Error("ProfileTask", "No top task named %s known by the manager.", name); |
1115 | return; |
1116 | } |
1117 | Int_t itop = fTopTasks->IndexOf(task); |
1118 | Int_t itask = fTasks->IndexOf(task); |
1119 | // Create canvas with 2 pads: first draw COO + Terminate, second Exec |
1120 | TDirectory *cdir = gDirectory; |
1121 | TFile f("syswatch.root"); |
1122 | TTree *tree = (TTree*)f.Get("syswatch"); |
1123 | if (!tree) { |
1124 | Error("ProfileTask", "No tree named <syswatch> found in file syswatch.root"); |
1125 | return; |
1126 | } |
cd463514 |
1127 | if (fDebug > 1) printf("=== Profiling task %s (class %s)\n", name, task->ClassName()); |
096b5a2e |
1128 | TCanvas *canvas = new TCanvas(Form("profile_%d",itop),Form("Profile of task %s (class %s)",name,task->ClassName()),10,10,800,600); |
1129 | canvas->Divide(2, 2, 0.01, 0.01); |
1130 | Int_t ipad = 1; |
1131 | TString cut; |
1132 | TH1 *hist; |
1133 | // VM profile for COO and Terminate methods |
1134 | canvas->cd(ipad++); |
1135 | cut = Form("task==%d && (stage==0 || stage==2)",itask); |
1136 | tree->Draw("deltaVM:sname",cut,"", 1234567890, 0); |
1137 | hist = (TH1*)gPad->GetListOfPrimitives()->FindObject("htemp"); |
1138 | if (hist) { |
084c84df |
1139 | hist->SetTitle("Alocated VM[MB] for COO and Terminate"); |
1140 | hist->GetYaxis()->SetTitle("deltaVM [MB]"); |
096b5a2e |
1141 | hist->GetXaxis()->SetTitle("method"); |
1142 | } |
1143 | // CPU profile per event |
1144 | canvas->cd(ipad++); |
1145 | cut = Form("task==%d && stage==1",itop); |
1146 | tree->Draw("deltaT:event",cut,"", 1234567890, 0); |
1147 | hist = (TH1*)gPad->GetListOfPrimitives()->FindObject("htemp"); |
1148 | if (hist) { |
1149 | hist->SetTitle("Execution time per event"); |
1150 | hist->GetYaxis()->SetTitle("CPU/event [s]"); |
1151 | } |
1152 | // VM profile for Exec |
1153 | canvas->cd(ipad++); |
1154 | cut = Form("task==%d && stage==1",itop); |
1155 | tree->Draw("deltaVM:event",cut,"", 1234567890, 0); |
1156 | hist = (TH1*)gPad->GetListOfPrimitives()->FindObject("htemp"); |
1157 | if (hist) { |
084c84df |
1158 | hist->SetTitle("Alocated VM[MB] per event"); |
1159 | hist->GetYaxis()->SetTitle("deltaVM [MB]"); |
096b5a2e |
1160 | } |
1161 | canvas->Modified(); |
1162 | delete tree; |
1163 | f.Close(); |
1164 | if (cdir) cdir->cd(); |
1165 | } |
d3106602 |
1166 | |
1167 | //______________________________________________________________________________ |
1168 | void AliAnalysisManager::AddTask(AliAnalysisTask *task) |
1169 | { |
1170 | // Adds a user task to the global list of tasks. |
21ca8e59 |
1171 | if (fInitOK) { |
1172 | Error("AddTask", "Cannot add task %s since InitAnalysis was already called", task->GetName()); |
1173 | return; |
1174 | } |
1175 | |
8d7d3b59 |
1176 | if (fTasks->FindObject(task)) { |
1177 | Warning("AddTask", "Task %s: the same object already added to the analysis manager. Not adding.", task->GetName()); |
1178 | return; |
1179 | } |
d3106602 |
1180 | task->SetActive(kFALSE); |
1181 | fTasks->Add(task); |
1182 | } |
1183 | |
1184 | //______________________________________________________________________________ |
1185 | AliAnalysisTask *AliAnalysisManager::GetTask(const char *name) const |
1186 | { |
1187 | // Retreive task by name. |
1188 | if (!fTasks) return NULL; |
1189 | return (AliAnalysisTask*)fTasks->FindObject(name); |
1190 | } |
1191 | |
1192 | //______________________________________________________________________________ |
1193 | AliAnalysisDataContainer *AliAnalysisManager::CreateContainer(const char *name, |
c52c2132 |
1194 | TClass *datatype, EAliAnalysisContType type, const char *filename) |
d3106602 |
1195 | { |
1196 | // Create a data container of a certain type. Types can be: |
84fcd93f |
1197 | // kExchangeContainer = 0, used to exchange data between tasks |
d3106602 |
1198 | // kInputContainer = 1, used to store input data |
84fcd93f |
1199 | // kOutputContainer = 2, used for writing result to a file |
1200 | // filename: composed by file#folder (e.g. results.root#INCLUSIVE) - will write |
1201 | // the output object to a folder inside the output file |
b1310ef5 |
1202 | if (fContainers->FindObject(name)) { |
923e2ca5 |
1203 | Error("CreateContainer","A container named %s already defined !",name); |
b1310ef5 |
1204 | return NULL; |
1205 | } |
d3106602 |
1206 | AliAnalysisDataContainer *cont = new AliAnalysisDataContainer(name, datatype); |
1207 | fContainers->Add(cont); |
1208 | switch (type) { |
1209 | case kInputContainer: |
1210 | fInputs->Add(cont); |
1211 | break; |
1212 | case kOutputContainer: |
1213 | fOutputs->Add(cont); |
8c0ab8e8 |
1214 | if (filename && strlen(filename)) { |
1215 | cont->SetFileName(filename); |
6cd44ee0 |
1216 | cont->SetDataOwned(kFALSE); // data owned by the file |
1217 | } |
1218 | break; |
1219 | case kParamContainer: |
1220 | fParamCont->Add(cont); |
1221 | if (filename && strlen(filename)) { |
1222 | cont->SetFileName(filename); |
8c0ab8e8 |
1223 | cont->SetDataOwned(kFALSE); // data owned by the file |
1224 | } |
d3106602 |
1225 | break; |
c52c2132 |
1226 | case kExchangeContainer: |
d3106602 |
1227 | break; |
1228 | } |
1229 | return cont; |
1230 | } |
1231 | |
1232 | //______________________________________________________________________________ |
1233 | Bool_t AliAnalysisManager::ConnectInput(AliAnalysisTask *task, Int_t islot, |
1234 | AliAnalysisDataContainer *cont) |
1235 | { |
1236 | // Connect input of an existing task to a data container. |
60a04972 |
1237 | if (!task) { |
1238 | Error("ConnectInput", "Task pointer is NULL"); |
1239 | return kFALSE; |
1240 | } |
d3106602 |
1241 | if (!fTasks->FindObject(task)) { |
1242 | AddTask(task); |
8d7d3b59 |
1243 | Info("ConnectInput", "Task %s was not registered. Now owned by analysis manager", task->GetName()); |
d3106602 |
1244 | } |
1245 | Bool_t connected = task->ConnectInput(islot, cont); |
1246 | return connected; |
1247 | } |
1248 | |
1249 | //______________________________________________________________________________ |
1250 | Bool_t AliAnalysisManager::ConnectOutput(AliAnalysisTask *task, Int_t islot, |
1251 | AliAnalysisDataContainer *cont) |
1252 | { |
1253 | // Connect output of an existing task to a data container. |
60a04972 |
1254 | if (!task) { |
1255 | Error("ConnectOutput", "Task pointer is NULL"); |
1256 | return kFALSE; |
1257 | } |
d3106602 |
1258 | if (!fTasks->FindObject(task)) { |
1259 | AddTask(task); |
c52c2132 |
1260 | Warning("ConnectOutput", "Task %s not registered. Now owned by analysis manager", task->GetName()); |
d3106602 |
1261 | } |
1262 | Bool_t connected = task->ConnectOutput(islot, cont); |
1263 | return connected; |
1264 | } |
1265 | |
1266 | //______________________________________________________________________________ |
1267 | void AliAnalysisManager::CleanContainers() |
1268 | { |
1269 | // Clean data from all containers that have already finished all client tasks. |
1270 | TIter next(fContainers); |
1271 | AliAnalysisDataContainer *cont; |
1272 | while ((cont=(AliAnalysisDataContainer *)next())) { |
1273 | if (cont->IsOwnedData() && |
1274 | cont->IsDataReady() && |
1275 | cont->ClientsExecuted()) cont->DeleteData(); |
1276 | } |
1277 | } |
1278 | |
1279 | //______________________________________________________________________________ |
1280 | Bool_t AliAnalysisManager::InitAnalysis() |
1281 | { |
1282 | // Initialization of analysis chain of tasks. Should be called after all tasks |
1283 | // and data containers are properly connected |
923e2ca5 |
1284 | // Reset flag and remove valid_outputs file if exists |
21ca8e59 |
1285 | if (fInitOK) return kTRUE; |
923e2ca5 |
1286 | if (!gSystem->AccessPathName("outputs_valid")) |
1287 | gSystem->Unlink("outputs_valid"); |
d3106602 |
1288 | // Check for top tasks (depending only on input data containers) |
1289 | if (!fTasks->First()) { |
c52c2132 |
1290 | Error("InitAnalysis", "Analysis has no tasks !"); |
d3106602 |
1291 | return kFALSE; |
1292 | } |
1293 | TIter next(fTasks); |
1294 | AliAnalysisTask *task; |
1295 | AliAnalysisDataContainer *cont; |
1296 | Int_t ntop = 0; |
1297 | Int_t nzombies = 0; |
327eaf46 |
1298 | Bool_t iszombie = kFALSE; |
1299 | Bool_t istop = kTRUE; |
d3106602 |
1300 | Int_t i; |
1301 | while ((task=(AliAnalysisTask*)next())) { |
327eaf46 |
1302 | istop = kTRUE; |
1303 | iszombie = kFALSE; |
d3106602 |
1304 | Int_t ninputs = task->GetNinputs(); |
d3106602 |
1305 | for (i=0; i<ninputs; i++) { |
1306 | cont = task->GetInputSlot(i)->GetContainer(); |
1307 | if (!cont) { |
327eaf46 |
1308 | if (!iszombie) { |
d3106602 |
1309 | task->SetZombie(); |
1310 | fZombies->Add(task); |
1311 | nzombies++; |
327eaf46 |
1312 | iszombie = kTRUE; |
d3106602 |
1313 | } |
c52c2132 |
1314 | Error("InitAnalysis", "Input slot %d of task %s has no container connected ! Declared zombie...", |
1315 | i, task->GetName()); |
d3106602 |
1316 | } |
327eaf46 |
1317 | if (iszombie) continue; |
d3106602 |
1318 | // Check if cont is an input container |
327eaf46 |
1319 | if (istop && !fInputs->FindObject(cont)) istop=kFALSE; |
d3106602 |
1320 | // Connect to parent task |
1321 | } |
327eaf46 |
1322 | if (istop) { |
d3106602 |
1323 | ntop++; |
1324 | fTopTasks->Add(task); |
1325 | } |
1326 | } |
1327 | if (!ntop) { |
c52c2132 |
1328 | Error("InitAnalysis", "No top task defined. At least one task should be connected only to input containers"); |
d3106602 |
1329 | return kFALSE; |
1330 | } |
1331 | // Check now if there are orphan tasks |
1332 | for (i=0; i<ntop; i++) { |
1333 | task = (AliAnalysisTask*)fTopTasks->At(i); |
1334 | task->SetUsed(); |
1335 | } |
1336 | Int_t norphans = 0; |
1337 | next.Reset(); |
1338 | while ((task=(AliAnalysisTask*)next())) { |
1339 | if (!task->IsUsed()) { |
1340 | norphans++; |
c52c2132 |
1341 | Warning("InitAnalysis", "Task %s is orphan", task->GetName()); |
d3106602 |
1342 | } |
1343 | } |
1344 | // Check the task hierarchy (no parent task should depend on data provided |
1345 | // by a daughter task) |
1346 | for (i=0; i<ntop; i++) { |
1347 | task = (AliAnalysisTask*)fTopTasks->At(i); |
1348 | if (task->CheckCircularDeps()) { |
c52c2132 |
1349 | Error("InitAnalysis", "Found illegal circular dependencies between following tasks:"); |
d3106602 |
1350 | PrintStatus("dep"); |
1351 | return kFALSE; |
1352 | } |
1353 | } |
b1310ef5 |
1354 | // Check that all containers feeding post-event loop tasks are in the outputs list |
1355 | TIter nextcont(fContainers); // loop over all containers |
1356 | while ((cont=(AliAnalysisDataContainer*)nextcont())) { |
1357 | if (!cont->IsPostEventLoop() && !fOutputs->FindObject(cont)) { |
1358 | if (cont->HasConsumers()) { |
1359 | // Check if one of the consumers is post event loop |
1360 | TIter nextconsumer(cont->GetConsumers()); |
1361 | while ((task=(AliAnalysisTask*)nextconsumer())) { |
1362 | if (task->IsPostEventLoop()) { |
1363 | fOutputs->Add(cont); |
1364 | break; |
1365 | } |
1366 | } |
1367 | } |
1368 | } |
1369 | } |
8d7d3b59 |
1370 | // Check if all special output containers have a file name provided |
1371 | TIter nextout(fOutputs); |
1372 | while ((cont=(AliAnalysisDataContainer*)nextout())) { |
1373 | if (cont->IsSpecialOutput() && !strlen(cont->GetFileName())) { |
1374 | Error("InitAnalysis", "Wrong container %s : a file name MUST be provided for special outputs", cont->GetName()); |
1375 | return kFALSE; |
1376 | } |
7acc5b9d |
1377 | } |
1378 | // Initialize requested branch list if needed |
1379 | if (!fAutoBranchHandling) { |
1380 | next.Reset(); |
1381 | while ((task=(AliAnalysisTask*)next())) { |
1382 | if (!task->HasBranches()) { |
1383 | Error("InitAnalysis", "Manual branch loading requested but task %s of type %s does not define branches.\nUse: fBranchNames = \"ESD:br1,br2,...,brN AOD:bra1,bra2,...,braM\"", |
1384 | task->GetName(), task->ClassName()); |
1385 | return kFALSE; |
1386 | } |
1387 | if (!fInputEventHandler || !strlen(fInputEventHandler->GetDataType())) { |
1388 | Error("InitAnalysis", "Manual branch loading requested but no input handler defined or handler does not define data type."); |
1389 | return kFALSE; |
1390 | } |
1391 | TString taskbranches; |
1392 | task->GetBranches(fInputEventHandler->GetDataType(), taskbranches); |
1393 | if (taskbranches.IsNull()) { |
1394 | Error("InitAnalysis", "Manual branch loading requested but task %s of type %s does not define branches of type %s:", |
1395 | task->GetName(), task->ClassName(), fInputEventHandler->GetDataType()); |
1396 | return kFALSE; |
1397 | } |
1398 | AddBranches(taskbranches); |
1399 | } |
1400 | } |
327eaf46 |
1401 | fInitOK = kTRUE; |
d3106602 |
1402 | return kTRUE; |
1403 | } |
1404 | |
1405 | //______________________________________________________________________________ |
7acc5b9d |
1406 | void AliAnalysisManager::AddBranches(const char *branches) |
1407 | { |
1408 | // Add branches to the existing fRequestedBranches. |
1409 | TString br(branches); |
1410 | TObjArray *arr = br.Tokenize(","); |
1411 | TIter next(arr); |
1412 | TObject *obj; |
1413 | while ((obj=next())) { |
1414 | if (!fRequestedBranches.Contains(obj->GetName())) { |
1415 | if (!fRequestedBranches.IsNull()) fRequestedBranches += ","; |
1416 | fRequestedBranches += obj->GetName(); |
1417 | } |
1418 | } |
dcc1f876 |
1419 | delete arr; |
7acc5b9d |
1420 | } |
1421 | |
1422 | //______________________________________________________________________________ |
1423 | void AliAnalysisManager::CheckBranches(Bool_t load) |
1424 | { |
1425 | // The method checks the input branches to be loaded during the analysis. |
1426 | if (fAutoBranchHandling || fRequestedBranches.IsNull() || !fTree) return; |
1427 | TObjArray *arr = fRequestedBranches.Tokenize(","); |
1428 | TIter next(arr); |
1429 | TObject *obj; |
1430 | while ((obj=next())) { |
1431 | TBranch *br = dynamic_cast<TBranch*>(fTable.FindObject(obj->GetName())); |
1432 | if (!br) { |
1433 | br = fTree->GetBranch(obj->GetName()); |
1434 | if (!br) { |
1435 | Error("CheckBranches", "Could not find branch %s",obj->GetName()); |
1436 | continue; |
1437 | } |
1438 | } |
1439 | fTable.Add(br); |
1440 | if (load && br->GetReadEntry()!=GetCurrentEntry()) br->GetEntry(GetCurrentEntry()); |
1441 | } |
dcc1f876 |
1442 | delete arr; |
7acc5b9d |
1443 | } |
1444 | |
1445 | //______________________________________________________________________________ |
4747b4a7 |
1446 | Bool_t AliAnalysisManager::CheckTasks() const |
1447 | { |
1448 | // Check consistency of tasks. |
25c87093 |
1449 | Int_t ntasks = fTasks->GetEntries(); |
1450 | if (!ntasks) { |
1451 | Error("CheckTasks", "No tasks connected to the manager. This may be due to forgetting to compile the task or to load their library."); |
1452 | return kFALSE; |
1453 | } |
4747b4a7 |
1454 | // Get the pointer to AliAnalysisTaskSE::Class() |
1455 | TClass *badptr = (TClass*)gROOT->ProcessLine("AliAnalysisTaskSE::Class()"); |
1456 | // Loop all tasks to check if their corresponding library was loaded |
1457 | TIter next(fTasks); |
1458 | TObject *obj; |
1459 | while ((obj=next())) { |
1460 | if (obj->IsA() == badptr) { |
1461 | Error("CheckTasks", "##################\n \ |
1462 | Class for task %s NOT loaded. You probably forgot to load the library for this task (or compile it dynamically).\n###########################\n",obj->GetName()); |
1463 | return kFALSE; |
1464 | } |
1465 | } |
1466 | return kTRUE; |
1467 | } |
1468 | |
1469 | //______________________________________________________________________________ |
d3106602 |
1470 | void AliAnalysisManager::PrintStatus(Option_t *option) const |
1471 | { |
1472 | // Print task hierarchy. |
8c0ab8e8 |
1473 | if (!fInitOK) { |
1474 | Info("PrintStatus", "Analysis manager %s not initialized : call InitAnalysis() first", GetName()); |
1475 | return; |
1476 | } |
1477 | Bool_t getsysInfo = ((fNSysInfo>0) && (fMode==kLocalAnalysis))?kTRUE:kFALSE; |
1478 | if (getsysInfo) |
1479 | Info("PrintStatus", "System information will be collected each %lld events", fNSysInfo); |
d3106602 |
1480 | TIter next(fTopTasks); |
1481 | AliAnalysisTask *task; |
1482 | while ((task=(AliAnalysisTask*)next())) |
1483 | task->PrintTask(option); |
dcc1f876 |
1484 | |
7acc5b9d |
1485 | if (!fAutoBranchHandling && !fRequestedBranches.IsNull()) |
1486 | printf("Requested input branches:\n%s\n", fRequestedBranches.Data()); |
dcc1f876 |
1487 | |
1488 | TString sopt(option); |
1489 | sopt.ToUpper(); |
1490 | |
1491 | if (sopt.Contains("ALL")) |
1492 | { |
1493 | if ( fOutputEventHandler ) |
1494 | { |
1495 | cout << TString('_',78) << endl; |
1496 | cout << "OutputEventHandler:" << endl; |
1497 | fOutputEventHandler->Print(" "); |
1498 | } |
1499 | } |
d3106602 |
1500 | } |
1501 | |
1502 | //______________________________________________________________________________ |
1503 | void AliAnalysisManager::ResetAnalysis() |
1504 | { |
1505 | // Reset all execution flags and clean containers. |
1506 | CleanContainers(); |
1507 | } |
1508 | |
1509 | //______________________________________________________________________________ |
27734f0e |
1510 | Long64_t AliAnalysisManager::StartAnalysis(const char *type, Long64_t nentries, Long64_t firstentry) |
1511 | { |
1512 | // Start analysis having a grid handler. |
1513 | if (!fGridHandler) { |
1514 | Error("StartAnalysis", "Cannot start analysis providing just the analysis type without a grid handler."); |
1515 | Info("===", "Add an AliAnalysisAlien object as plugin for this manager and configure it."); |
1516 | return -1; |
1517 | } |
1518 | TTree *tree = NULL; |
1519 | return StartAnalysis(type, tree, nentries, firstentry); |
1520 | } |
1521 | |
1522 | //______________________________________________________________________________ |
61505f8b |
1523 | Long64_t AliAnalysisManager::StartAnalysis(const char *type, TTree * const tree, Long64_t nentries, Long64_t firstentry) |
c52c2132 |
1524 | { |
aee5ee44 |
1525 | // Start analysis for this manager. Analysis task can be: LOCAL, PROOF, GRID or |
1526 | // MIX. Process nentries starting from firstentry |
bf574918 |
1527 | Long64_t retv = 0; |
57756ec5 |
1528 | // Backup current directory and make sure gDirectory points to gROOT |
1529 | TDirectory *cdir = gDirectory; |
1530 | gROOT->cd(); |
c52c2132 |
1531 | if (!fInitOK) { |
1532 | Error("StartAnalysis","Analysis manager was not initialized !"); |
57756ec5 |
1533 | cdir->cd(); |
1f87e9fb |
1534 | return -1; |
c52c2132 |
1535 | } |
4747b4a7 |
1536 | if (!CheckTasks()) Fatal("StartAnalysis", "Not all needed libraries were loaded"); |
20b7268e |
1537 | if (fDebug > 1) { |
1538 | printf("StartAnalysis %s\n",GetName()); |
1539 | AliLog::SetGlobalLogLevel(AliLog::kInfo); |
1540 | } |
f03a8355 |
1541 | fMaxEntries = nentries; |
8e1f0465 |
1542 | fIsRemote = kFALSE; |
c52c2132 |
1543 | TString anaType = type; |
1544 | anaType.ToLower(); |
1545 | fMode = kLocalAnalysis; |
c57f56b7 |
1546 | Bool_t runlocalinit = kTRUE; |
90a4b3ee |
1547 | if (anaType.Contains("file")) { |
1548 | runlocalinit = kFALSE; |
8e1f0465 |
1549 | fIsRemote = kTRUE; |
90a4b3ee |
1550 | } |
4ab472d4 |
1551 | if (anaType.Contains("proof")) fMode = kProofAnalysis; |
1552 | else if (anaType.Contains("grid")) fMode = kGridAnalysis; |
1553 | else if (anaType.Contains("mix")) fMode = kMixingAnalysis; |
1554 | |
c52c2132 |
1555 | if (fMode == kGridAnalysis) { |
8e1f0465 |
1556 | fIsRemote = kTRUE; |
f866cba5 |
1557 | if (!anaType.Contains("terminate")) { |
1558 | if (!fGridHandler) { |
1559 | Error("StartAnalysis", "Cannot start grid analysis without a grid handler."); |
1560 | Info("===", "Add an AliAnalysisAlien object as plugin for this manager and configure it."); |
57756ec5 |
1561 | cdir->cd(); |
f866cba5 |
1562 | return -1; |
1563 | } |
1564 | // Write analysis manager in the analysis file |
1565 | cout << "===== RUNNING GRID ANALYSIS: " << GetName() << endl; |
1566 | // run local task configuration |
1567 | TIter nextTask(fTasks); |
1568 | AliAnalysisTask *task; |
1569 | while ((task=(AliAnalysisTask*)nextTask())) { |
1570 | task->LocalInit(); |
57756ec5 |
1571 | gROOT->cd(); |
f866cba5 |
1572 | } |
1573 | if (!fGridHandler->StartAnalysis(nentries, firstentry)) { |
1574 | Info("StartAnalysis", "Grid analysis was stopped and cannot be terminated"); |
57756ec5 |
1575 | cdir->cd(); |
f866cba5 |
1576 | return -1; |
1577 | } |
c57f56b7 |
1578 | |
f866cba5 |
1579 | // Terminate grid analysis |
57756ec5 |
1580 | if (fSelector && fSelector->GetStatus() == -1) {cdir->cd(); return -1;} |
1581 | if (fGridHandler->GetRunMode() == AliAnalysisGrid::kOffline) {cdir->cd(); return 0;} |
f866cba5 |
1582 | cout << "===== MERGING OUTPUTS REGISTERED BY YOUR ANALYSIS JOB: " << GetName() << endl; |
1583 | if (!fGridHandler->MergeOutputs()) { |
1584 | // Return if outputs could not be merged or if it alien handler |
1585 | // was configured for offline mode or local testing. |
57756ec5 |
1586 | cdir->cd(); |
f866cba5 |
1587 | return 0; |
1588 | } |
1589 | } |
1590 | cout << "===== TERMINATING GRID ANALYSIS JOB: " << GetName() << endl; |
c57f56b7 |
1591 | ImportWrappers(NULL); |
1592 | Terminate(); |
57756ec5 |
1593 | cdir->cd(); |
1f87e9fb |
1594 | return 0; |
981f2614 |
1595 | } |
ab5d25d8 |
1596 | TString line; |
efd53803 |
1597 | SetEventLoop(kFALSE); |
8d7d3b59 |
1598 | // Enable event loop mode if a tree was provided |
27734f0e |
1599 | if (tree || fGridHandler || fMode==kMixingAnalysis) SetEventLoop(kTRUE); |
efd53803 |
1600 | |
8c0ab8e8 |
1601 | TChain *chain = 0; |
1602 | TString ttype = "TTree"; |
4ab472d4 |
1603 | if (tree && tree->IsA() == TChain::Class()) { |
8c0ab8e8 |
1604 | chain = (TChain*)tree; |
6b742510 |
1605 | if (!chain || !chain->GetListOfFiles()->First()) { |
1606 | Error("StartAnalysis", "Cannot process null or empty chain..."); |
57756ec5 |
1607 | cdir->cd(); |
1f87e9fb |
1608 | return -1; |
6b742510 |
1609 | } |
8c0ab8e8 |
1610 | ttype = "TChain"; |
1611 | } |
9b33830a |
1612 | |
096b5a2e |
1613 | Bool_t getsysInfo = ((fNSysInfo>0) && (fMode==kLocalAnalysis))?kTRUE:kFALSE; |
1614 | if (getsysInfo) AliSysInfo::AddStamp("Start", 0); |
aee5ee44 |
1615 | // Initialize locally all tasks (happens for all modes) |
9b33830a |
1616 | TIter next(fTasks); |
1617 | AliAnalysisTask *task; |
c57f56b7 |
1618 | if (runlocalinit) { |
1619 | while ((task=(AliAnalysisTask*)next())) { |
1620 | task->LocalInit(); |
57756ec5 |
1621 | gROOT->cd(); |
c57f56b7 |
1622 | } |
096b5a2e |
1623 | if (getsysInfo) AliSysInfo::AddStamp("LocalInit_all", 0); |
c57f56b7 |
1624 | } |
efd53803 |
1625 | |
c52c2132 |
1626 | switch (fMode) { |
1627 | case kLocalAnalysis: |
27734f0e |
1628 | if (!tree && !fGridHandler) { |
03a5cc9f |
1629 | TIter nextT(fTasks); |
981f2614 |
1630 | // Call CreateOutputObjects for all tasks |
096b5a2e |
1631 | Int_t itask = 0; |
979e448a |
1632 | Bool_t dirStatus = TH1::AddDirectoryStatus(); |
03a5cc9f |
1633 | while ((task=(AliAnalysisTask*)nextT())) { |
979e448a |
1634 | TH1::AddDirectory(kFALSE); |
c5a87c56 |
1635 | task->CreateOutputObjects(); |
4747b4a7 |
1636 | if (!task->CheckPostData()) { |
1637 | Error("SlaveBegin","####### IMPORTANT! ####### \n\n\n\ |
1638 | Task %s (%s) did not call PostData() for all its outputs in (User)CreateOutputObjects()\n\n\ |
1639 | ########### FIX YOUR CODE, THIS WILL PRODUCE A FATAL ERROR IN FUTURE! ###########", task->GetName(), task->ClassName()); |
1640 | } |
096b5a2e |
1641 | if (getsysInfo) AliSysInfo::AddStamp(Form("%s_CREATEOUTOBJ",task->ClassName()), 0, itask, 0); |
57756ec5 |
1642 | gROOT->cd(); |
096b5a2e |
1643 | itask++; |
c5a87c56 |
1644 | } |
979e448a |
1645 | TH1::AddDirectory(dirStatus); |
06a59280 |
1646 | if (IsExternalLoop()) { |
1647 | Info("StartAnalysis", "Initialization done. Event loop is controlled externally.\ |
1648 | \nSetData for top container, call ExecAnalysis in a loop and then Terminate manually"); |
1f87e9fb |
1649 | return 0; |
57756ec5 |
1650 | } |
c52c2132 |
1651 | ExecAnalysis(); |
981f2614 |
1652 | Terminate(); |
1f87e9fb |
1653 | return 0; |
c52c2132 |
1654 | } |
27734f0e |
1655 | fSelector = new AliAnalysisSelector(this); |
1656 | // Check if a plugin handler is used |
1657 | if (fGridHandler) { |
1658 | // Get the chain from the plugin |
1659 | TString dataType = "esdTree"; |
1660 | if (fInputEventHandler) { |
1661 | dataType = fInputEventHandler->GetDataType(); |
1662 | dataType.ToLower(); |
1663 | dataType += "Tree"; |
1664 | } |
1665 | chain = fGridHandler->GetChainForTestMode(dataType); |
1666 | if (!chain) { |
1667 | Error("StartAnalysis", "No chain for test mode. Aborting."); |
1668 | return -1; |
1669 | } |
1670 | cout << "===== RUNNING LOCAL ANALYSIS" << GetName() << " ON CHAIN " << chain->GetName() << endl; |
1671 | retv = chain->Process(fSelector, "", nentries, firstentry); |
1672 | break; |
1673 | } |
c52c2132 |
1674 | // Run tree-based analysis via AliAnalysisSelector |
c52c2132 |
1675 | cout << "===== RUNNING LOCAL ANALYSIS " << GetName() << " ON TREE " << tree->GetName() << endl; |
bf574918 |
1676 | retv = tree->Process(fSelector, "", nentries, firstentry); |
c52c2132 |
1677 | break; |
1678 | case kProofAnalysis: |
8e1f0465 |
1679 | fIsRemote = kTRUE; |
3bdcb562 |
1680 | // Check if the plugin is used |
1681 | if (fGridHandler) { |
1682 | return StartAnalysis(type, fGridHandler->GetProofDataSet(), nentries, firstentry); |
1683 | } |
c52c2132 |
1684 | if (!gROOT->GetListOfProofs() || !gROOT->GetListOfProofs()->GetEntries()) { |
61505f8b |
1685 | Error("StartAnalysis", "No PROOF!!! Exiting."); |
57756ec5 |
1686 | cdir->cd(); |
1f87e9fb |
1687 | return -1; |
c52c2132 |
1688 | } |
ea091b97 |
1689 | line = Form("gProof->AddInput((TObject*)%p);", this); |
c52c2132 |
1690 | gROOT->ProcessLine(line); |
1691 | if (chain) { |
1692 | chain->SetProof(); |
1693 | cout << "===== RUNNING PROOF ANALYSIS " << GetName() << " ON CHAIN " << chain->GetName() << endl; |
bf574918 |
1694 | retv = chain->Process("AliAnalysisSelector", "", nentries, firstentry); |
c52c2132 |
1695 | } else { |
61505f8b |
1696 | Error("StartAnalysis", "No chain!!! Exiting."); |
57756ec5 |
1697 | cdir->cd(); |
1f87e9fb |
1698 | return -1; |
c52c2132 |
1699 | } |
1700 | break; |
1701 | case kGridAnalysis: |
27734f0e |
1702 | fIsRemote = kTRUE; |
1703 | if (!anaType.Contains("terminate")) { |
1704 | if (!fGridHandler) { |
1705 | Error("StartAnalysis", "Cannot start grid analysis without a grid handler."); |
1706 | Info("===", "Add an AliAnalysisAlien object as plugin for this manager and configure it."); |
1707 | cdir->cd(); |
1708 | return -1; |
1709 | } |
1710 | // Write analysis manager in the analysis file |
1711 | cout << "===== RUNNING GRID ANALYSIS: " << GetName() << endl; |
1712 | // Start the analysis via the handler |
1713 | if (!fGridHandler->StartAnalysis(nentries, firstentry)) { |
1714 | Info("StartAnalysis", "Grid analysis was stopped and cannot be terminated"); |
1715 | cdir->cd(); |
1716 | return -1; |
1717 | } |
1718 | |
1719 | // Terminate grid analysis |
1720 | if (fSelector && fSelector->GetStatus() == -1) {cdir->cd(); return -1;} |
1721 | if (fGridHandler->GetRunMode() == AliAnalysisGrid::kOffline) {cdir->cd(); return 0;} |
1722 | cout << "===== MERGING OUTPUTS REGISTERED BY YOUR ANALYSIS JOB: " << GetName() << endl; |
1723 | if (!fGridHandler->MergeOutputs()) { |
1724 | // Return if outputs could not be merged or if it alien handler |
1725 | // was configured for offline mode or local testing. |
1726 | cdir->cd(); |
1727 | return 0; |
1728 | } |
1729 | } |
1730 | cout << "===== TERMINATING GRID ANALYSIS JOB: " << GetName() << endl; |
1731 | ImportWrappers(NULL); |
1732 | Terminate(); |
1733 | cdir->cd(); |
1734 | return 0; |
aee5ee44 |
1735 | case kMixingAnalysis: |
1736 | // Run event mixing analysis |
1737 | if (!fEventPool) { |
1738 | Error("StartAnalysis", "Cannot run event mixing without event pool"); |
57756ec5 |
1739 | cdir->cd(); |
1f87e9fb |
1740 | return -1; |
aee5ee44 |
1741 | } |
1742 | cout << "===== RUNNING EVENT MIXING ANALYSIS " << GetName() << endl; |
1743 | fSelector = new AliAnalysisSelector(this); |
aee5ee44 |
1744 | while ((chain=fEventPool->GetNextChain())) { |
d1e79f9e |
1745 | next.Reset(); |
aee5ee44 |
1746 | // Call NotifyBinChange for all tasks |
1747 | while ((task=(AliAnalysisTask*)next())) |
1748 | if (!task->IsPostEventLoop()) task->NotifyBinChange(); |
bf574918 |
1749 | retv = chain->Process(fSelector); |
1750 | if (retv < 0) { |
1751 | Error("StartAnalysis", "Mixing analysis failed"); |
57756ec5 |
1752 | cdir->cd(); |
bf574918 |
1753 | return retv; |
1754 | } |
aee5ee44 |
1755 | } |
1756 | PackOutput(fSelector->GetOutputList()); |
1757 | Terminate(); |
1f87e9fb |
1758 | } |
57756ec5 |
1759 | cdir->cd(); |
bf574918 |
1760 | return retv; |
c52c2132 |
1761 | } |
1762 | |
1763 | //______________________________________________________________________________ |
1f87e9fb |
1764 | Long64_t AliAnalysisManager::StartAnalysis(const char *type, const char *dataset, Long64_t nentries, Long64_t firstentry) |
d86ed856 |
1765 | { |
1766 | // Start analysis for this manager on a given dataset. Analysis task can be: |
1767 | // LOCAL, PROOF or GRID. Process nentries starting from firstentry. |
1768 | if (!fInitOK) { |
1769 | Error("StartAnalysis","Analysis manager was not initialized !"); |
1f87e9fb |
1770 | return -1; |
d86ed856 |
1771 | } |
8e1f0465 |
1772 | fIsRemote = kTRUE; |
cd463514 |
1773 | if (fDebug > 1) printf("StartAnalysis %s\n",GetName()); |
d86ed856 |
1774 | TString anaType = type; |
1775 | anaType.ToLower(); |
1776 | if (!anaType.Contains("proof")) { |
d140f7fb |
1777 | Error("StartAnalysis", "Cannot process datasets in %s mode. Try PROOF.", type); |
1f87e9fb |
1778 | return -1; |
d86ed856 |
1779 | } |
1780 | fMode = kProofAnalysis; |
ab5d25d8 |
1781 | TString line; |
d86ed856 |
1782 | SetEventLoop(kTRUE); |
1783 | // Set the dataset flag |
1784 | TObject::SetBit(kUseDataSet); |
1785 | fTree = 0; |
3bdcb562 |
1786 | if (fGridHandler) { |
1787 | // Start proof analysis using the grid handler |
1788 | if (!fGridHandler->StartAnalysis(nentries, firstentry)) { |
1789 | Error("StartAnalysis", "The grid plugin could not start PROOF analysis"); |
1790 | return -1; |
1791 | } |
1792 | // Check if the plugin is in test mode |
1793 | if (fGridHandler->GetRunMode() == AliAnalysisGrid::kTest) { |
830acc4c |
1794 | dataset = "test_collection"; |
3bdcb562 |
1795 | } else { |
1796 | dataset = fGridHandler->GetProofDataSet(); |
1797 | } |
1798 | } |
1799 | |
1800 | if (!gROOT->GetListOfProofs() || !gROOT->GetListOfProofs()->GetEntries()) { |
1801 | Error("StartAnalysis", "No PROOF!!! Exiting."); |
1802 | return -1; |
1803 | } |
d86ed856 |
1804 | |
1805 | // Initialize locally all tasks |
1806 | TIter next(fTasks); |
1807 | AliAnalysisTask *task; |
1808 | while ((task=(AliAnalysisTask*)next())) { |
1809 | task->LocalInit(); |
1810 | } |
1811 | |
ea091b97 |
1812 | line = Form("gProof->AddInput((TObject*)%p);", this); |
d86ed856 |
1813 | gROOT->ProcessLine(line); |
3bdcb562 |
1814 | Long_t retv; |
ea091b97 |
1815 | line = Form("gProof->Process(\"%s\", \"AliAnalysisSelector\", \"\", %lld, %lld);", |
1816 | dataset, nentries, firstentry); |
1817 | cout << "===== RUNNING PROOF ANALYSIS " << GetName() << " ON DATASET " << dataset << endl; |
1818 | retv = (Long_t)gROOT->ProcessLine(line); |
bf574918 |
1819 | return retv; |
d86ed856 |
1820 | } |
1821 | |
1822 | //______________________________________________________________________________ |
84fcd93f |
1823 | TFile *AliAnalysisManager::OpenFile(AliAnalysisDataContainer *cont, const char *option, Bool_t ignoreProof) |
1824 | { |
1825 | // Opens according the option the file specified by cont->GetFileName() and changes |
1826 | // current directory to cont->GetFolderName(). If the file was already opened, it |
1827 | // checks if the option UPDATE was preserved. File open via TProofOutputFile can |
1828 | // be optionally ignored. |
1829 | AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager(); |
1830 | TString filename = cont->GetFileName(); |
1831 | TFile *f = NULL; |
1832 | if (filename.IsNull()) { |
1833 | ::Error("AliAnalysisManager::OpenFile", "No file name specified for container %s", cont->GetName()); |
1834 | return NULL; |
1835 | } |
1836 | if (mgr->GetAnalysisType()==AliAnalysisManager::kProofAnalysis && cont->IsSpecialOutput() |
1837 | && !ignoreProof) |
1838 | f = mgr->OpenProofFile(cont,option); |
1839 | else { |
1840 | // Check first if the file is already opened |
0f1b50f3 |
1841 | f = (TFile*)gROOT->GetListOfFiles()->FindObject(filename); |
84fcd93f |
1842 | if (f) { |
1843 | // Check if option "UPDATE" was preserved |
1844 | TString opt(option); |
1845 | opt.ToUpper(); |
1846 | if ((opt=="UPDATE") && (opt!=f->GetOption())) |
e85311b4 |
1847 | ::Info("AliAnalysisManager::OpenFile", "File %s already opened in %s mode!", cont->GetFileName(), f->GetOption()); |
84fcd93f |
1848 | } else { |
0f1b50f3 |
1849 | f = TFile::Open(filename, option); |
84fcd93f |
1850 | } |
1851 | } |
1852 | if (f && !f->IsZombie() && !f->TestBit(TFile::kRecovered)) { |
1853 | cont->SetFile(f); |
1854 | // Cd to file |
1855 | f->cd(); |
1856 | // Check for a folder request |
1857 | TString dir = cont->GetFolderName(); |
1858 | if (!dir.IsNull()) { |
1859 | if (!f->GetDirectory(dir)) f->mkdir(dir); |
1860 | f->cd(dir); |
1861 | } |
1862 | return f; |
1863 | } |
1864 | ::Fatal("AliAnalysisManager::OpenFile", "File %s could not be opened", filename.Data()); |
1865 | cont->SetFile(NULL); |
1866 | return NULL; |
1867 | } |
1868 | |
1869 | //______________________________________________________________________________ |
039e671e |
1870 | TFile *AliAnalysisManager::OpenProofFile(AliAnalysisDataContainer *cont, const char *option, const char *extaod) |
8d7d3b59 |
1871 | { |
1872 | // Opens a special output file used in PROOF. |
84fcd93f |
1873 | TString line; |
1874 | TString filename = cont->GetFileName(); |
23c9468b |
1875 | if (cont == fCommonOutput) { |
039e671e |
1876 | if (fOutputEventHandler) { |
1877 | if (strlen(extaod)) filename = extaod; |
1878 | filename = fOutputEventHandler->GetOutputFileName(); |
1879 | } |
61505f8b |
1880 | else Fatal("OpenProofFile","No output container. Exiting."); |
23c9468b |
1881 | } |
84fcd93f |
1882 | TFile *f = NULL; |
1883 | if (fMode!=kProofAnalysis || !fSelector) { |
1884 | Fatal("OpenProofFile","Cannot open PROOF file %s: no PROOF or selector",filename.Data()); |
1885 | return NULL; |
1886 | } |
1887 | if (fSpecialOutputLocation.Length()) { |
1888 | f = (TFile*)gROOT->GetListOfFiles()->FindObject(filename); |
1889 | if (f) { |
1890 | // Check if option "UPDATE" was preserved |
1891 | TString opt(option); |
1892 | opt.ToUpper(); |
23c9468b |
1893 | if ((opt=="UPDATE") && (opt!=f->GetOption())) |
e85311b4 |
1894 | ::Info("OpenProofFile", "File %s already opened in %s mode!", cont->GetFileName(), f->GetOption()); |
84fcd93f |
1895 | } else { |
1896 | f = new TFile(filename, option); |
1897 | } |
1898 | if (f && !f->IsZombie() && !f->TestBit(TFile::kRecovered)) { |
1899 | cont->SetFile(f); |
1900 | // Cd to file |
1901 | f->cd(); |
1902 | // Check for a folder request |
1903 | TString dir = cont->GetFolderName(); |
1904 | if (dir.Length()) { |
1905 | if (!f->GetDirectory(dir)) f->mkdir(dir); |
1906 | f->cd(dir); |
1907 | } |
f5e61abd |
1908 | return f; |
84fcd93f |
1909 | } |
1910 | Fatal("OpenProofFile", "File %s could not be opened", cont->GetFileName()); |
1911 | cont->SetFile(NULL); |
1912 | return NULL; |
1913 | } |
1914 | // Check if there is already a proof output file in the output list |
1915 | TObject *pof = fSelector->GetOutputList()->FindObject(filename); |
1916 | if (pof) { |
1917 | // Get the actual file |
b3e07543 |
1918 | line = Form("((TProofOutputFile*)%p)->GetFileName();", pof); |
84fcd93f |
1919 | filename = (const char*)gROOT->ProcessLine(line); |
90a4b3ee |
1920 | if (fDebug>1) { |
1921 | printf("File: %s already booked via TProofOutputFile\n", filename.Data()); |
1922 | } |
84fcd93f |
1923 | f = (TFile*)gROOT->GetListOfFiles()->FindObject(filename); |
ab5d25d8 |
1924 | if (!f) { |
1925 | Fatal("OpenProofFile", "Proof output file found but no file opened for %s", filename.Data()); |
1926 | return NULL; |
1927 | } |
84fcd93f |
1928 | // Check if option "UPDATE" was preserved |
1929 | TString opt(option); |
1930 | opt.ToUpper(); |
1931 | if ((opt=="UPDATE") && (opt!=f->GetOption())) |
1932 | Fatal("OpenProofFile", "File %s already opened, but not in UPDATE mode!", cont->GetFileName()); |
1933 | } else { |
90a4b3ee |
1934 | if (cont->IsRegisterDataset()) { |
61505f8b |
1935 | TString dsetName = filename; |
1936 | dsetName.ReplaceAll(".root", cont->GetTitle()); |
1937 | dsetName.ReplaceAll(":","_"); |
1938 | if (fDebug>1) printf("Booking dataset: %s\n", dsetName.Data()); |
1939 | line = Form("TProofOutputFile *pf = new TProofOutputFile(\"%s\", \"DROV\", \"%s\");", filename.Data(), dsetName.Data()); |
90a4b3ee |
1940 | } else { |
1941 | if (fDebug>1) printf("Booking TProofOutputFile: %s to be merged\n", filename.Data()); |
1942 | line = Form("TProofOutputFile *pf = new TProofOutputFile(\"%s\");", filename.Data()); |
1943 | } |
84fcd93f |
1944 | if (fDebug > 1) printf("=== %s\n", line.Data()); |
1945 | gROOT->ProcessLine(line); |
1946 | line = Form("pf->OpenFile(\"%s\");", option); |
1947 | gROOT->ProcessLine(line); |
1948 | f = gFile; |
1949 | if (fDebug > 1) { |
8d7d3b59 |
1950 | gROOT->ProcessLine("pf->Print()"); |
84fcd93f |
1951 | printf(" == proof file name: %s", f->GetName()); |
1952 | } |
1953 | // Add to proof output list |
b3e07543 |
1954 | line = Form("((TList*)%p)->Add(pf);",fSelector->GetOutputList()); |
90a4b3ee |
1955 | if (fDebug > 1) printf("=== %s\n", line.Data()); |
84fcd93f |
1956 | gROOT->ProcessLine(line); |
1957 | } |
1958 | if (f && !f->IsZombie() && !f->TestBit(TFile::kRecovered)) { |
1959 | cont->SetFile(f); |
1960 | // Cd to file |
1961 | f->cd(); |
1962 | // Check for a folder request |
1963 | TString dir = cont->GetFolderName(); |
1964 | if (!dir.IsNull()) { |
1965 | if (!f->GetDirectory(dir)) f->mkdir(dir); |
1966 | f->cd(dir); |
1967 | } |
1968 | return f; |
1969 | } |
1970 | Fatal("OpenProofFile", "File %s could not be opened", cont->GetFileName()); |
1971 | cont->SetFile(NULL); |
1972 | return NULL; |
8d7d3b59 |
1973 | } |
1974 | |
1975 | //______________________________________________________________________________ |
d3106602 |
1976 | void AliAnalysisManager::ExecAnalysis(Option_t *option) |
1977 | { |
1978 | // Execute analysis. |
cd463514 |
1979 | static Long64_t nentries = 0; |
1f04b637 |
1980 | static TTree *lastTree = 0; |
cd463514 |
1981 | static TStopwatch *timer = new TStopwatch(); |
20b7268e |
1982 | // Only the first call to Process will trigger a true Notify. Other Notify |
1983 | // coming before is ignored. |
1984 | if (!TObject::TestBit(AliAnalysisManager::kTrueNotify)) { |
1985 | TObject::SetBit(AliAnalysisManager::kTrueNotify); |
1986 | Notify(); |
1987 | } |
e9247450 |
1988 | if (fDebug > 0) printf("MGR: Processing event #%d\n", fNcalls); |
cd463514 |
1989 | else { |
1f04b637 |
1990 | if (fTree && (fTree != lastTree)) { |
1991 | nentries += fTree->GetEntries(); |
1992 | lastTree = fTree; |
1993 | } |
e9247450 |
1994 | if (!fNcalls) timer->Start(); |
f03a8355 |
1995 | if (!fIsRemote && TObject::TestBit(kUseProgressBar)) ProgressBar("Processing event", fNcalls, TMath::Min(fMaxEntries,nentries), timer, kFALSE); |
cd463514 |
1996 | } |
57756ec5 |
1997 | gROOT->cd(); |
cd463514 |
1998 | TDirectory *cdir = gDirectory; |
8c0ab8e8 |
1999 | Bool_t getsysInfo = ((fNSysInfo>0) && (fMode==kLocalAnalysis))?kTRUE:kFALSE; |
e9247450 |
2000 | if (getsysInfo && ((fNcalls%fNSysInfo)==0)) AliSysInfo::AddStamp("Exec_start", (Int_t)fNcalls); |
327eaf46 |
2001 | if (!fInitOK) { |
57756ec5 |
2002 | Error("ExecAnalysis", "Analysis manager was not initialized !"); |
2003 | cdir->cd(); |
327eaf46 |
2004 | return; |
57756ec5 |
2005 | } |
e9247450 |
2006 | fNcalls++; |
d3106602 |
2007 | AliAnalysisTask *task; |
327eaf46 |
2008 | // Check if the top tree is active. |
2009 | if (fTree) { |
e9247450 |
2010 | if (getsysInfo && ((fNcalls%fNSysInfo)==0)) |
2011 | AliSysInfo::AddStamp("Handlers_BeginEventGroup",fNcalls, 1002, 0); |
327eaf46 |
2012 | TIter next(fTasks); |
2013 | // De-activate all tasks |
2014 | while ((task=(AliAnalysisTask*)next())) task->SetActive(kFALSE); |
ce46ecc1 |
2015 | AliAnalysisDataContainer *cont = fCommonInput; |
2016 | if (!cont) cont = (AliAnalysisDataContainer*)fInputs->At(0); |
327eaf46 |
2017 | if (!cont) { |
c52c2132 |
2018 | Error("ExecAnalysis","Cannot execute analysis in TSelector mode without at least one top container"); |
57756ec5 |
2019 | cdir->cd(); |
327eaf46 |
2020 | return; |
2021 | } |
2022 | cont->SetData(fTree); // This will notify all consumers |
57756ec5 |
2023 | Long64_t entry = fTree->GetTree()->GetReadEntry(); |
6bb2b24f |
2024 | // |
c3701689 |
2025 | // Call BeginEvent() for optional input/output and MC services |
ed97dc98 |
2026 | if (fInputEventHandler) fInputEventHandler ->BeginEvent(entry); |
2027 | if (fOutputEventHandler) fOutputEventHandler ->BeginEvent(entry); |
2028 | if (fMCtruthEventHandler) fMCtruthEventHandler->BeginEvent(entry); |
57756ec5 |
2029 | gROOT->cd(); |
e9247450 |
2030 | if (getsysInfo && ((fNcalls%fNSysInfo)==0)) |
2031 | AliSysInfo::AddStamp("Handlers_BeginEvent",fNcalls, 1000, 0); |
6bb2b24f |
2032 | // |
2033 | // Execute the tasks |
276941c8 |
2034 | // TIter next1(cont->GetConsumers()); |
2035 | TIter next1(fTopTasks); |
096b5a2e |
2036 | Int_t itask = 0; |
327eaf46 |
2037 | while ((task=(AliAnalysisTask*)next1())) { |
c52c2132 |
2038 | if (fDebug >1) { |
2039 | cout << " Executing task " << task->GetName() << endl; |
096b5a2e |
2040 | } |
327eaf46 |
2041 | task->ExecuteTask(option); |
57756ec5 |
2042 | gROOT->cd(); |
e9247450 |
2043 | if (getsysInfo && ((fNcalls%fNSysInfo)==0)) |
2044 | AliSysInfo::AddStamp(task->ClassName(), fNcalls, itask, 1); |
096b5a2e |
2045 | itask++; |
327eaf46 |
2046 | } |
6bb2b24f |
2047 | // |
2048 | // Call FinishEvent() for optional output and MC services |
6073f8c9 |
2049 | if (fInputEventHandler) fInputEventHandler ->FinishEvent(); |
6bb2b24f |
2050 | if (fOutputEventHandler) fOutputEventHandler ->FinishEvent(); |
2051 | if (fMCtruthEventHandler) fMCtruthEventHandler->FinishEvent(); |
8c0ab8e8 |
2052 | // Gather system information if requested |
e9247450 |
2053 | if (getsysInfo && ((fNcalls%fNSysInfo)==0)) |
2054 | AliSysInfo::AddStamp("Handlers_FinishEvent",fNcalls, 1001, 1); |
57756ec5 |
2055 | cdir->cd(); |
327eaf46 |
2056 | return; |
2057 | } |
2058 | // The event loop is not controlled by TSelector |
6bb2b24f |
2059 | // |
c3701689 |
2060 | // Call BeginEvent() for optional input/output and MC services |
ed97dc98 |
2061 | if (fInputEventHandler) fInputEventHandler ->BeginEvent(-1); |
2062 | if (fOutputEventHandler) fOutputEventHandler ->BeginEvent(-1); |
2063 | if (fMCtruthEventHandler) fMCtruthEventHandler->BeginEvent(-1); |
57756ec5 |
2064 | gROOT->cd(); |
e9247450 |
2065 | if (getsysInfo && ((fNcalls%fNSysInfo)==0)) |
2066 | AliSysInfo::AddStamp("Handlers_BeginEvent",fNcalls, 1000, 0); |
327eaf46 |
2067 | TIter next2(fTopTasks); |
2068 | while ((task=(AliAnalysisTask*)next2())) { |
2069 | task->SetActive(kTRUE); |
c52c2132 |
2070 | if (fDebug > 1) { |
2071 | cout << " Executing task " << task->GetName() << endl; |
2072 | } |
d3106602 |
2073 | task->ExecuteTask(option); |
57756ec5 |
2074 | gROOT->cd(); |
327eaf46 |
2075 | } |
6bb2b24f |
2076 | // |
2077 | // Call FinishEvent() for optional output and MC services |
6073f8c9 |
2078 | if (fInputEventHandler) fInputEventHandler ->FinishEvent(); |
2079 | if (fOutputEventHandler) fOutputEventHandler ->FinishEvent(); |
6bb2b24f |
2080 | if (fMCtruthEventHandler) fMCtruthEventHandler->FinishEvent(); |
e9247450 |
2081 | if (getsysInfo && ((fNcalls%fNSysInfo)==0)) |
2082 | AliSysInfo::AddStamp("Handlers_FinishEvent",fNcalls, 1000, 1); |
57756ec5 |
2083 | cdir->cd(); |
d3106602 |
2084 | } |
2085 | |
2086 | //______________________________________________________________________________ |
8ddad121 |
2087 | Bool_t AliAnalysisManager::IsPipe(std::ostream &out) |
2088 | { |
2089 | // Check if the stdout is connected to a pipe (C.Holm) |
2090 | Bool_t ispipe = kFALSE; |
2091 | out.seekp(0, std::ios_base::cur); |
2092 | if (out.fail()) { |
2093 | out.clear(); |
2094 | if (errno == ESPIPE) ispipe = kTRUE; |
2095 | } |
2096 | return ispipe; |
2097 | } |
2098 | |
2099 | //______________________________________________________________________________ |
61505f8b |
2100 | void AliAnalysisManager::SetInputEventHandler(AliVEventHandler* const handler) |
60a04972 |
2101 | { |
2102 | // Set the input event handler and create a container for it. |
2103 | fInputEventHandler = handler; |
523aab8b |
2104 | if (!fCommonInput) fCommonInput = CreateContainer("cAUTO_INPUT", TChain::Class(), AliAnalysisManager::kInputContainer); |
60a04972 |
2105 | } |
2106 | |
2107 | //______________________________________________________________________________ |
61505f8b |
2108 | void AliAnalysisManager::SetOutputEventHandler(AliVEventHandler* const handler) |
60a04972 |
2109 | { |
2110 | // Set the input event handler and create a container for it. |
2111 | fOutputEventHandler = handler; |
523aab8b |
2112 | if (!fCommonOutput) fCommonOutput = CreateContainer("cAUTO_OUTPUT", TTree::Class(), AliAnalysisManager::kOutputContainer, "default"); |
673f68ff |
2113 | fCommonOutput->SetSpecialOutput(); |
60a04972 |
2114 | } |
c07b9ce2 |
2115 | |
2116 | //______________________________________________________________________________ |
f03a8355 |
2117 | void AliAnalysisManager::SetDebugLevel(UInt_t level) |
2118 | { |
2119 | // Set verbosity of the analysis manager. If the progress bar is used, the call is ignored |
2120 | if (TObject::TestBit(kUseProgressBar)) { |
2121 | Info("SetDebugLevel","Ignored. Disable the progress bar first."); |
2122 | return; |
2123 | } |
2124 | fDebug = level; |
2125 | } |
2126 | |
2127 | //______________________________________________________________________________ |
2128 | void AliAnalysisManager::SetUseProgressBar(Bool_t flag, Int_t freq) |
2129 | { |
2130 | // Enable a text mode progress bar. Resets debug level to 0. |
2131 | Info("SetUseProgressBar", "Progress bar enabled, updated every %d events.\n ### NOTE: Debug level reset to 0 ###", freq); |
2132 | TObject::SetBit(kUseProgressBar,flag); |
2133 | fPBUpdateFreq = freq; |
2134 | fDebug = 0; |
2135 | } |
2136 | |
2137 | //______________________________________________________________________________ |
c07b9ce2 |
2138 | void AliAnalysisManager::RegisterExtraFile(const char *fname) |
2139 | { |
2140 | // This method is used externally to register output files which are not |
2141 | // connected to any output container, so that the manager can properly register, |
2142 | // retrieve or merge them when running in distributed mode. The file names are |
2143 | // separated by blancs. The method has to be called in MyAnalysisTask::LocalInit(). |
5b9b4998 |
2144 | if (fExtraFiles.Contains(fname)) return; |
c07b9ce2 |
2145 | if (fExtraFiles.Length()) fExtraFiles += " "; |
2146 | fExtraFiles += fname; |
2147 | } |
2148 | |
2149 | //______________________________________________________________________________ |
61505f8b |
2150 | Bool_t AliAnalysisManager::GetFileFromWrapper(const char *filename, const TList *source) |
c07b9ce2 |
2151 | { |
2152 | // Copy a file from the location specified ina the wrapper with the same name from the source list. |
61505f8b |
2153 | char fullPath[512]; |
2154 | char chUrl[512]; |
b3e07543 |
2155 | char tmp[1024]; |
c07b9ce2 |
2156 | TObject *pof = source->FindObject(filename); |
2157 | if (!pof || !pof->InheritsFrom("TProofOutputFile")) { |
2158 | Error("GetFileFromWrapper", "TProofOutputFile object not found in output list for file %s", filename); |
2159 | return kFALSE; |
2160 | } |
b3e07543 |
2161 | gROOT->ProcessLine(Form("sprintf((char*)%p, \"%%s\", ((TProofOutputFile*)%p)->GetOutputFileName());", fullPath, pof)); |
2162 | gROOT->ProcessLine(Form("sprintf((char*)%p, \"%%s\", gProof->GetUrl());",chUrl)); |
61505f8b |
2163 | TString clientUrl(chUrl); |
2164 | TString fullPath_str(fullPath); |
c07b9ce2 |
2165 | if (clientUrl.Contains("localhost")){ |
61505f8b |
2166 | TObjArray* array = fullPath_str.Tokenize ( "//" ); |
c07b9ce2 |
2167 | TObjString *strobj = ( TObjString *)array->At(1); |
2168 | TObjArray* arrayPort = strobj->GetString().Tokenize ( ":" ); |
2169 | TObjString *strobjPort = ( TObjString *) arrayPort->At(1); |
61505f8b |
2170 | fullPath_str.ReplaceAll(strobj->GetString().Data(),"localhost:PORT"); |
2171 | fullPath_str.ReplaceAll(":PORT",Form(":%s",strobjPort->GetString().Data())); |
2172 | if (fDebug > 1) Info("GetFileFromWrapper","Using tunnel from %s to %s",fullPath_str.Data(),filename); |
c07b9ce2 |
2173 | delete arrayPort; |
2174 | delete array; |
2175 | } |
b3e07543 |
2176 | else if (clientUrl.Contains("__lite__")) { |
2177 | // Special case for ProofLite environement - get file info and copy. |
2178 | gROOT->ProcessLine(Form("sprintf((char*)%p,\"%%s\",((TProofOutputFile*)%p)->GetDir());", tmp, pof)); |
2179 | fullPath_str = Form("%s/%s", tmp, fullPath); |
2180 | } |
c07b9ce2 |
2181 | if (fDebug > 1) |
b3e07543 |
2182 | Info("GetFileFromWrapper","Copying file %s from PROOF scratch space to %s", fullPath_str.Data(),filename); |
61505f8b |
2183 | Bool_t gotit = TFile::Cp(fullPath_str.Data(), filename); |
c07b9ce2 |
2184 | if (!gotit) |
2185 | Error("GetFileFromWrapper", "Could not get file %s from proof scratch space", filename); |
2186 | return gotit; |
2187 | } |
d29168d6 |
2188 | |
2189 | //______________________________________________________________________________ |
2190 | void AliAnalysisManager::GetAnalysisTypeString(TString &type) const |
2191 | { |
2192 | // Fill analysis type in the provided string. |
2193 | switch (fMode) { |
2194 | case kLocalAnalysis: |
2195 | type = "local"; |
2196 | return; |
2197 | case kProofAnalysis: |
2198 | type = "proof"; |
2199 | return; |
2200 | case kGridAnalysis: |
2201 | type = "grid"; |
2202 | return; |
2203 | case kMixingAnalysis: |
2204 | type = "mix"; |
2205 | } |
2206 | } |
923e2ca5 |
2207 | |
2208 | //______________________________________________________________________________ |
2209 | Bool_t AliAnalysisManager::ValidateOutputFiles() const |
2210 | { |
2211 | // Validate all output files. |
2212 | TIter next(fOutputs); |
2213 | AliAnalysisDataContainer *output; |
2214 | TDirectory *cdir = gDirectory; |
84fcd93f |
2215 | TString openedFiles; |
923e2ca5 |
2216 | while ((output=(AliAnalysisDataContainer*)next())) { |
90a4b3ee |
2217 | if (output->IsRegisterDataset()) continue; |
923e2ca5 |
2218 | TString filename = output->GetFileName(); |
2219 | if (filename == "default") { |
2220 | if (!fOutputEventHandler) continue; |
2221 | filename = fOutputEventHandler->GetOutputFileName(); |
b3685485 |
2222 | // Main AOD may not be there |
2223 | if (gSystem->AccessPathName(filename)) continue; |
923e2ca5 |
2224 | } |
2225 | // Check if the file is closed |
84fcd93f |
2226 | if (openedFiles.Contains(filename)) continue;; |
923e2ca5 |
2227 | TFile *file = (TFile*)gROOT->GetListOfFiles()->FindObject(filename); |
2228 | if (file) { |
2229 | Warning("ValidateOutputs", "File %s was not closed. Closing.", filename.Data()); |
f3c07fbd |
2230 | // Clear file list to release object ownership to user. |
160e7161 |
2231 | // file->Clear(); |
923e2ca5 |
2232 | file->Close(); |
2233 | } |
2234 | file = TFile::Open(filename); |
2235 | if (!file || file->IsZombie() || file->TestBit(TFile::kRecovered)) { |
2236 | Error("ValidateOutputs", "Output file <%s> was not created or invalid", filename.Data()); |
2237 | cdir->cd(); |
2238 | return kFALSE; |
2239 | } |
2240 | file->Close(); |
84fcd93f |
2241 | openedFiles += filename; |
2242 | openedFiles += " "; |
923e2ca5 |
2243 | } |
2244 | cdir->cd(); |
2245 | return kTRUE; |
2246 | } |
cd11251e |
2247 | |
2248 | //______________________________________________________________________________ |
61505f8b |
2249 | void AliAnalysisManager::ProgressBar(const char *opname, Long64_t current, Long64_t size, TStopwatch * const watch, Bool_t last, Bool_t refresh) |
cd11251e |
2250 | { |
2251 | // Implements a nice text mode progress bar. |
2252 | static Long64_t icount = 0; |
2253 | static TString oname; |
2254 | static TString nname; |
2255 | static Long64_t ocurrent = 0; |
2256 | static Long64_t osize = 0; |
2257 | static Int_t oseconds = 0; |
2258 | static TStopwatch *owatch = 0; |
2259 | static Bool_t oneoftwo = kFALSE; |
2260 | static Int_t nrefresh = 0; |
2261 | static Int_t nchecks = 0; |
8ddad121 |
2262 | static char lastChar = 0; |
f03a8355 |
2263 | const char symbol[4] = {'-','\\','|','/'}; |
cd11251e |
2264 | |
8ddad121 |
2265 | if (!lastChar) lastChar = (IsPipe(std::cerr))?'\r':'\n'; |
cd11251e |
2266 | if (!refresh) { |
2267 | nrefresh = 0; |
2268 | if (!size) return; |
2269 | owatch = watch; |
2270 | oname = opname; |
2271 | ocurrent = TMath::Abs(current); |
2272 | osize = TMath::Abs(size); |
2273 | if (ocurrent > osize) ocurrent=osize; |
2274 | } else { |
2275 | nrefresh++; |
2276 | if (!osize) return; |
2277 | } |
f03a8355 |
2278 | if ((current % fPBUpdateFreq) != 0) return; |
cd11251e |
2279 | icount++; |
f03a8355 |
2280 | char progress[11] = " "; |
2281 | Int_t ichar = icount%4; |
cd11251e |
2282 | Double_t time = 0.; |
2283 | Int_t hours = 0; |
2284 | Int_t minutes = 0; |
2285 | Int_t seconds = 0; |
2286 | if (owatch && !last) { |
2287 | owatch->Stop(); |
2288 | time = owatch->RealTime(); |
f03a8355 |
2289 | seconds = int(time) % 60; |
2290 | minutes = (int(time) / 60) % 60; |
2291 | hours = (int(time) / 60 / 60); |
cd11251e |
2292 | if (refresh) { |
2293 | if (oseconds==seconds) { |
2294 | owatch->Continue(); |
2295 | return; |
2296 | } |
2297 | oneoftwo = !oneoftwo; |
2298 | } |
2299 | oseconds = seconds; |
2300 | } |
2301 | if (refresh && oneoftwo) { |
2302 | nname = oname; |
2303 | if (nchecks <= 0) nchecks = nrefresh+1; |
2304 | Int_t pctdone = (Int_t)(100.*nrefresh/nchecks); |
2305 | oname = Form(" == %d%% ==", pctdone); |
2306 | } |
2307 | Double_t percent = 100.0*ocurrent/osize; |
2308 | Int_t nchar = Int_t(percent/10); |
2309 | if (nchar>10) nchar=10; |
2310 | Int_t i; |
2311 | for (i=0; i<nchar; i++) progress[i] = '='; |
2312 | progress[nchar] = symbol[ichar]; |
2313 | for (i=nchar+1; i<10; i++) progress[i] = ' '; |
2314 | progress[10] = '\0'; |
2315 | oname += " "; |
2316 | oname.Remove(20); |
2317 | if(size<10000) fprintf(stderr, "%s [%10s] %4lld ", oname.Data(), progress, ocurrent); |
2318 | else if(size<100000) fprintf(stderr, "%s [%10s] %5lld ",oname.Data(), progress, ocurrent); |
2319 | else fprintf(stderr, "%s [%10s] %7lld ",oname.Data(), progress, ocurrent); |
f03a8355 |
2320 | if (time>0.) { |
2321 | Int_t full = Int_t(ocurrent > 0 ? |
2322 | time * (float(osize)/ocurrent) + .5 : |
2323 | 99*3600+59*60+59); |
499b6d5d |
2324 | Int_t remain = Int_t(full - time); |
f03a8355 |
2325 | Int_t rsec = remain % 60; |
2326 | Int_t rmin = (remain / 60) % 60; |
2327 | Int_t rhour = (remain / 60 / 60); |
8ddad121 |
2328 | fprintf(stderr, "[%6.2f %%] TIME %.2d:%.2d:%.2d ETA %.2d:%.2d:%.2d%c", |
2329 | percent, hours, minutes, seconds, rhour, rmin, rsec, lastChar); |
f03a8355 |
2330 | } |
8ddad121 |
2331 | else fprintf(stderr, "[%6.2f %%]%c", percent, lastChar); |
cd11251e |
2332 | if (refresh && oneoftwo) oname = nname; |
2333 | if (owatch) owatch->Continue(); |
2334 | if (last) { |
2335 | icount = 0; |
2336 | owatch = 0; |
2337 | ocurrent = 0; |
2338 | osize = 0; |
2339 | oseconds = 0; |
2340 | oneoftwo = kFALSE; |
2341 | nrefresh = 0; |
2342 | fprintf(stderr, "\n"); |
2343 | } |
2344 | } |
012e169c |
2345 | |
2346 | //______________________________________________________________________________ |
2347 | void AliAnalysisManager::DoLoadBranch(const char *name) |
2348 | { |
2349 | // Get tree and load branch if needed. |
c5734a4b |
2350 | static Long64_t crtEntry = -100; |
012e169c |
2351 | |
7acc5b9d |
2352 | if (fAutoBranchHandling || !fTree) |
012e169c |
2353 | return; |
2354 | |
2355 | TBranch *br = dynamic_cast<TBranch*>(fTable.FindObject(name)); |
2356 | if (!br) { |
2357 | br = fTree->GetBranch(name); |
2358 | if (!br) { |
979e448a |
2359 | Error("DoLoadBranch", "Could not find branch %s",name); |
012e169c |
2360 | return; |
2361 | } |
2362 | fTable.Add(br); |
2363 | } |
c5734a4b |
2364 | if (br->GetReadEntry()==fCurrentEntry) return; |
f5cbe261 |
2365 | Int_t ret = br->GetEntry(GetCurrentEntry()); |
2366 | if (ret<0) { |
2367 | Error("DoLoadBranch", "Could not load entry %lld from branch %s",GetCurrentEntry(), name); |
c5734a4b |
2368 | if (crtEntry != fCurrentEntry) { |
2369 | CountEvent(1,0,1,0); |
2370 | crtEntry = fCurrentEntry; |
2371 | } |
2372 | } else { |
2373 | if (crtEntry != fCurrentEntry) { |
2374 | CountEvent(1,1,0,0); |
2375 | crtEntry = fCurrentEntry; |
2376 | } |
f5cbe261 |
2377 | } |
012e169c |
2378 | } |
e9247450 |
2379 | |
2380 | //______________________________________________________________________________ |
c3732d79 |
2381 | void AliAnalysisManager::AddStatisticsTask(UInt_t offlineMask) |
f5cbe261 |
2382 | { |
2383 | // Add the statistics task to the manager. |
2384 | if (fStatistics) { |
2385 | Info("AddStatisticsTask", "Already added"); |
2386 | return; |
c3732d79 |
2387 | } |
2388 | TString line = Form("AliAnalysisTaskStat::AddToManager(%u);", offlineMask); |
2389 | gROOT->ProcessLine(line); |
f5cbe261 |
2390 | } |
2391 | |
2392 | //______________________________________________________________________________ |
2393 | void AliAnalysisManager::CountEvent(Int_t ninput, Int_t nprocessed, Int_t nfailed, Int_t naccepted) |
2394 | { |
2395 | // Bookkeep current event; |
2396 | if (!fStatistics) return; |
2397 | fStatistics->AddInput(ninput); |
2398 | fStatistics->AddProcessed(nprocessed); |
2399 | fStatistics->AddFailed(nfailed); |
2400 | fStatistics->AddAccepted(naccepted); |
2401 | } |
2402 | |
2403 | //______________________________________________________________________________ |
e9247450 |
2404 | void AliAnalysisManager::AddStatisticsMsg(const char *line) |
2405 | { |
2406 | // Add a line in the statistics message. If available, the statistics message is written |
2407 | // at the end of the SlaveTerminate phase on workers AND at the end of Terminate |
2408 | // on the client. |
2409 | if (!strlen(line)) return; |
2410 | if (!fStatisticsMsg.IsNull()) fStatisticsMsg += "\n"; |
2411 | fStatisticsMsg += line; |
2412 | } |
2413 | |
2414 | //______________________________________________________________________________ |
a99b2241 |
2415 | void AliAnalysisManager::WriteStatisticsMsg(Int_t) |
e9247450 |
2416 | { |
23a74fb4 |
2417 | // If fStatistics is present, write the file in the format ninput_nprocessed_nfailed_naccepted.stat |
c3732d79 |
2418 | static Bool_t done = kFALSE; |
2419 | if (done) return; |
2420 | done = kTRUE; |
e296c79c |
2421 | if (!fStatistics) return; |
e9247450 |
2422 | ofstream out; |
e296c79c |
2423 | AddStatisticsMsg(Form("Number of input events: %lld",fStatistics->GetNinput())); |
2424 | AddStatisticsMsg(Form("Number of processed events: %lld",fStatistics->GetNprocessed())); |
2425 | AddStatisticsMsg(Form("Number of failed events (I/O): %lld",fStatistics->GetNfailed())); |
2426 | AddStatisticsMsg(Form("Number of accepted events for mask %s: %lld", AliAnalysisStatistics::GetMaskAsString(fStatistics->GetOfflineMask()), fStatistics->GetNaccepted())); |
2427 | out.open(Form("%lld_%lld_%lld_%lld.stat",fStatistics->GetNinput(), |
2428 | fStatistics->GetNprocessed(),fStatistics->GetNfailed(), |
2429 | fStatistics->GetNaccepted()), ios::out); |
2430 | out << fStatisticsMsg << endl; |
e9247450 |
2431 | out.close(); |
2432 | } |
37196805 |
2433 | |
2434 | //______________________________________________________________________________ |
2435 | const char* AliAnalysisManager::GetOADBPath() |
2436 | { |
2437 | // returns the path of the OADB |
2438 | // this static function just depends on environment variables |
2439 | |
2440 | static TString oadbPath; |
2441 | |
2442 | if (gSystem->Getenv("OADB_PATH")) |
2443 | oadbPath = gSystem->Getenv("OADB_PATH"); |
2444 | else if (gSystem->Getenv("ALICE_ROOT")) |
2445 | oadbPath.Form("%s/OADB", gSystem->Getenv("ALICE_ROOT")); |
2446 | else |
0a9cc013 |
2447 | ::Fatal("AliAnalysisManager::GetOADBPath", "Cannot figure out AODB path. Define ALICE_ROOT or OADB_PATH!"); |
37196805 |
2448 | |
2449 | return oadbPath; |
2450 | } |
77dad4a9 |
2451 | |
2452 | //______________________________________________________________________________ |
2453 | void AliAnalysisManager::SetGlobalStr(const char *key, const char *value) |
2454 | { |
2455 | // Define a custom string variable mapped to a global unique name. The variable |
2456 | // can be then retrieved by a given analysis macro via GetGlobalStr(key). |
2457 | AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager(); |
2458 | if (!mgr) { |
2459 | ::Error("AliAnalysisManager::SetGlobalStr", "No analysis manager defined"); |
2460 | return; |
2461 | } |
2462 | Bool_t valid = kFALSE; |
2463 | TString existing = AliAnalysisManager::GetGlobalStr(key, valid); |
2464 | if (valid) { |
2465 | ::Error("AliAnalysisManager::SetGlobalStr", "Global %s = %s already defined.", key, existing.Data()); |
2466 | return; |
2467 | } |
2468 | mgr->GetGlobals()->Add(new TObjString(key), new TObjString(value)); |
2469 | } |
2470 | |
2471 | //______________________________________________________________________________ |
2472 | const char *AliAnalysisManager::GetGlobalStr(const char *key, Bool_t &valid) |
2473 | { |
2474 | // Static method to retrieve a global variable defined via SetGlobalStr. |
2475 | valid = kFALSE; |
2476 | AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager(); |
2477 | if (!mgr) return 0; |
2478 | TObject *value = mgr->GetGlobals()->GetValue(key); |
2479 | if (!value) return 0; |
2480 | valid = kTRUE; |
2481 | return value->GetName(); |
2482 | } |
2483 | |
2484 | //______________________________________________________________________________ |
2485 | void AliAnalysisManager::SetGlobalInt(const char *key, Int_t value) |
2486 | { |
2487 | // Define a custom integer variable mapped to a global unique name. The variable |
2488 | // can be then retrieved by a given analysis macro via GetGlobalInt(key). |
2489 | AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager(); |
2490 | if (!mgr) { |
2491 | ::Error("AliAnalysisManager::SetGlobalStr", "No analysis manager defined"); |
2492 | return; |
2493 | } |
2494 | Bool_t valid = kFALSE; |
2495 | Int_t existing = AliAnalysisManager::GetGlobalInt(key, valid); |
2496 | if (valid) { |
2497 | ::Error("AliAnalysisManager::SetGlobalInt", "Global %s = %i already defined.", key, existing); |
2498 | return; |
2499 | } |
2500 | mgr->GetGlobals()->Add(new TObjString(key), new TObjString(TString::Format("%i",value))); |
2501 | } |
2502 | |
2503 | //______________________________________________________________________________ |
2504 | Int_t AliAnalysisManager::GetGlobalInt(const char *key, Bool_t &valid) |
2505 | { |
2506 | // Static method to retrieve a global variable defined via SetGlobalInt. |
2507 | valid = kFALSE; |
2508 | AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager(); |
2509 | if (!mgr) return 0; |
2510 | TObject *value = mgr->GetGlobals()->GetValue(key); |
2511 | if (!value) return 0; |
2512 | valid = kTRUE; |
2513 | TString s = value->GetName(); |
2514 | return s.Atoi(); |
2515 | } |
2516 | |
2517 | //______________________________________________________________________________ |
2518 | void AliAnalysisManager::SetGlobalDbl(const char *key, Double_t value) |
2519 | { |
2520 | // Define a custom double precision variable mapped to a global unique name. The variable |
2521 | // can be then retrieved by a given analysis macro via GetGlobalInt(key). |
2522 | AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager(); |
2523 | if (!mgr) { |
2524 | ::Error("AliAnalysisManager::SetGlobalStr", "No analysis manager defined"); |
2525 | return; |
2526 | } |
2527 | Bool_t valid = kFALSE; |
2528 | Double_t existing = AliAnalysisManager::GetGlobalDbl(key, valid); |
2529 | if (valid) { |
2530 | ::Error("AliAnalysisManager::SetGlobalInt", "Global %s = %g already defined.", key, existing); |
2531 | return; |
2532 | } |
2533 | mgr->GetGlobals()->Add(new TObjString(key), new TObjString(TString::Format("%f.16",value))); |
2534 | } |
2535 | |
2536 | //______________________________________________________________________________ |
2537 | Double_t AliAnalysisManager::GetGlobalDbl(const char *key, Bool_t &valid) |
2538 | { |
2539 | // Static method to retrieve a global variable defined via SetGlobalDbl. |
2540 | valid = kFALSE; |
2541 | AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager(); |
2542 | if (!mgr) return 0; |
2543 | TObject *value = mgr->GetGlobals()->GetValue(key); |
2544 | if (!value) return 0; |
2545 | valid = kTRUE; |
2546 | TString s = value->GetName(); |
2547 | return s.Atof(); |
2548 | } |