coverity fix
[u/mrichter/AliRoot.git] / EMCAL / AliEMCALReconstructor.cxx
CommitLineData
f6019cda 1/**************************************************************************
2 * Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. *
3 * *
4 * Author: The ALICE Off-line Project. *
5 * Contributors are mentioned in the code where appropriate. *
6 * *
7 * Permission to use, copy, modify and distribute this software and its *
8 * documentation strictly for non-commercial purposes is hereby granted *
9 * without fee, provided that the above copyright notice appears in all *
10 * copies and that both the copyright notice and this permission notice *
11 * appear in the supporting documentation. The authors make no claims *
12 * about the suitability of this software for any purpose. It is *
13 * provided "as is" without express or implied warranty. *
14 **************************************************************************/
15
16/* $Id$ */
17
18//_________________________________________________________________________
fa42b1f3 19//--
20//-- Yves Schutz (SUBATECH)
f6019cda 21// Reconstruction class. Redesigned from the old AliReconstructionner class and
22// derived from STEER/AliReconstructor.
23//
29c9d15f 24
85c25c2e 25
f6019cda 26// --- ROOT system ---
85c25c2e 27#include <TClonesArray.h>
0c5b726e 28#include "TGeoManager.h"
29#include "TGeoMatrix.h"
f6019cda 30
31// --- Standard library ---
32
33// --- AliRoot header files ---
f6019cda 34#include "AliEMCALReconstructor.h"
5dee926e 35
aaa3cb7c 36#include "AliCodeTimer.h"
23ca956b 37#include "AliCaloCalibPedestal.h"
38#include "AliEMCALCalibData.h"
af885e0f 39#include "AliESDEvent.h"
89ffc0b0 40#include "AliESDCaloCluster.h"
0e7c6655 41#include "AliESDCaloCells.h"
6a0cf740 42#include "AliESDtrack.h"
5dee926e 43#include "AliEMCALLoader.h"
98e9578e 44#include "AliEMCALRawUtils.h"
0e7c6655 45#include "AliEMCALDigit.h"
f6019cda 46#include "AliEMCALClusterizerv1.h"
ee08edde 47#include "AliEMCALClusterizerNxN.h"
5dee926e 48#include "AliEMCALRecPoint.h"
dc293ae9 49#include "AliEMCALPID.h"
0964c2e9 50#include "AliEMCALTrigger.h"
1d59832c 51#include "AliRawReader.h"
fa42b1f3 52#include "AliCDBEntry.h"
53#include "AliCDBManager.h"
65bdc82f 54#include "AliEMCALGeometry.h"
ac8ae9fe 55#include "AliEMCAL.h"
85c25c2e 56#include "AliESDVZERO.h"
0c5b726e 57#include "AliCDBManager.h"
72c58de0 58#include "AliRunLoader.h"
59#include "AliRun.h"
916f1e76 60#include "AliEMCALTriggerData.h"
61#include "AliEMCALTriggerElectronics.h"
fff39dd1 62#include "AliEMCALTriggerDCSConfigDB.h"
63#include "AliEMCALTriggerDCSConfig.h"
de39a0ff 64#include "AliEMCALTriggerData.h"
65#include "AliEMCALTriggerRawDigit.h"
66#include "AliEMCALTriggerPatch.h"
67#include "AliEMCALTriggerTypes.h"
1d59832c 68
85c25c2e 69ClassImp(AliEMCALReconstructor)
f6019cda 70
b57cc9b9 71const AliEMCALRecParam* AliEMCALReconstructor::fgkRecParam = 0; // EMCAL rec. parameters
72AliEMCALRawUtils* AliEMCALReconstructor::fgRawUtils = 0; // EMCAL raw utilities class
73AliEMCALClusterizer* AliEMCALReconstructor::fgClusterizer = 0; // EMCAL clusterizer class
74TClonesArray* AliEMCALReconstructor::fgDigitsArr = 0; // list of digits, to be used multiple times
75TObjArray* AliEMCALReconstructor::fgClustersArr = 0; // list of clusters, to be used multiple times
4bd37bd4 76TClonesArray* AliEMCALReconstructor::fgTriggerDigits = 0; // list of trigger digits, to be used multiple times
916f1e76 77AliEMCALTriggerElectronics* AliEMCALReconstructor::fgTriggerProcessor = 0x0;
f6019cda 78//____________________________________________________________________________
18a21c7c 79AliEMCALReconstructor::AliEMCALReconstructor()
29c9d15f 80 : fGeom(0),fCalibData(0),fPedestalData(0),fTriggerData(0x0)
f6019cda 81{
82 // ctor
65bdc82f 83
84 fgRawUtils = new AliEMCALRawUtils;
29c9d15f 85
72c58de0 86 //To make sure we match with the geometry in a simulation file,
87 //let's try to get it first. If not, take the default geometry
33c3c91a 88 AliRunLoader *rl = AliRunLoader::Instance();
7e1d9a9b 89 if (rl->GetAliRun()){
90 AliEMCAL * emcal = dynamic_cast<AliEMCAL*>(rl->GetAliRun()->GetDetector("EMCAL"));
91 if(emcal) fGeom = emcal->GetGeometry();
92 }
93
94 if(!fGeom) {
72c58de0 95 AliInfo(Form("Using default geometry in reconstruction"));
937d0661 96 fGeom = AliEMCALGeometry::GetInstance(AliEMCALGeometry::GetDefaultGeometryName());
65bdc82f 97 }
29c9d15f 98
0c5b726e 99 //Get calibration parameters
100 if(!fCalibData)
101 {
29c9d15f 102 AliCDBEntry *entry = (AliCDBEntry*)
103 AliCDBManager::Instance()->Get("EMCAL/Calib/Data");
104 if (entry) fCalibData = (AliEMCALCalibData*) entry->GetObject();
0c5b726e 105 }
29c9d15f 106
0c5b726e 107 if(!fCalibData)
29c9d15f 108 AliFatal("Calibration parameters not found in CDB!");
109
40164976 110 //Get calibration parameters
111 if(!fPedestalData)
112 {
de39a0ff 113 AliCDBEntry *entry = (AliCDBEntry*)
29c9d15f 114 AliCDBManager::Instance()->Get("EMCAL/Calib/Pedestals");
de39a0ff 115 if (entry) fPedestalData = (AliCaloCalibPedestal*) entry->GetObject();
40164976 116 }
de39a0ff 117
ee08edde 118 if(!fPedestalData)
119 AliFatal("Dead map not found in CDB!");
29c9d15f 120
72c58de0 121 if(!fGeom) AliFatal(Form("Could not get geometry!"));
29c9d15f 122
f62c044a 123 AliEMCALTriggerDCSConfigDB* dcsConfigDB = AliEMCALTriggerDCSConfigDB::Instance();
29c9d15f 124
f62c044a 125 const AliEMCALTriggerDCSConfig* dcsConfig = dcsConfigDB->GetTriggerDCSConfig();
29c9d15f 126
f62c044a 127 if (!dcsConfig) AliFatal("No Trigger DCS Configuration from OCDB!");
128 fgTriggerProcessor = new AliEMCALTriggerElectronics( dcsConfig );
29c9d15f 129
f62c044a 130 fTriggerData = new AliEMCALTriggerData();
29c9d15f 131
f62c044a 132 //Init temporary list of digits
4bd37bd4 133 fgDigitsArr = new TClonesArray("AliEMCALDigit",1000);
134 fgClustersArr = new TObjArray(1000);
135 fgTriggerDigits = new TClonesArray("AliEMCALTriggerRawDigit",1000);
f6019cda 136}
137
0a4cb131 138//____________________________________________________________________________
f6019cda 139AliEMCALReconstructor::~AliEMCALReconstructor()
140{
141 // dtor
29c9d15f 142
23ca956b 143 if(fGeom) delete fGeom;
80453a9f 144
145 //No need to delete, recovered from OCDB
146 //if(fCalibData) delete fCalibData;
147 //if(fPedestalData) delete fPedestalData;
de39a0ff 148
b57cc9b9 149 if(fgDigitsArr){
150 fgDigitsArr->Clear("C");
151 delete fgDigitsArr;
152 }
153
154 if(fgClustersArr){
155 fgClustersArr->Clear();
156 delete fgClustersArr;
157 }
158
4bd37bd4 159 if(fgTriggerDigits){
7dbb454b 160 fgTriggerDigits->Clear();
4bd37bd4 161 delete fgTriggerDigits;
162 }
163
23ca956b 164 if(fgRawUtils) delete fgRawUtils;
165 if(fgClusterizer) delete fgClusterizer;
f62c044a 166 if(fgTriggerProcessor) delete fgTriggerProcessor;
b57cc9b9 167
aaa3cb7c 168 AliCodeTimer::Instance()->Print();
f6019cda 169}
170
9519e3e3 171//____________________________________________________________________________
172void AliEMCALReconstructor::InitClusterizer() const
ee08edde 173{
9519e3e3 174 //Init the clusterizer with geometry and calibration pointers, avoid doing it twice.
175 Int_t clusterizerType = -1;
176 Int_t eventType = -1;
177 if(GetRecParam()) {
178 clusterizerType = GetRecParam()->GetClusterizerFlag();
179 eventType = GetRecParam()->GetEventSpecie();
7e1d9a9b 180 }
181 else{
9519e3e3 182 AliCDBEntry *entry = (AliCDBEntry*)
29c9d15f 183 AliCDBManager::Instance()->Get("EMCAL/Calib/RecoParam");
9519e3e3 184 //Get The reco param for the default event specie
185 if (entry) {
186 AliEMCALRecParam *recParam = (AliEMCALRecParam*)((TObjArray *) entry->GetObject())->At(0);
187 if(recParam) clusterizerType = recParam->GetClusterizerFlag();
de39a0ff 188 }
7e1d9a9b 189 }
ee08edde 190
9519e3e3 191 //Check if clusterizer previously set corresponds to what is needed for this event type
192 if(fgClusterizer){
193 if(eventType!=AliRecoParam::kCalib){
194 //printf("ReCreate clusterizer? Clusterizer set <%d>, Clusterizer in use <%s>\n",
29c9d15f 195 // clusterizerType, fgClusterizer->Version());
9519e3e3 196
197 if (clusterizerType == AliEMCALRecParam::kClusterizerv1 && !strcmp(fgClusterizer->Version(),"clu-v1")) return;
198
199 else if(clusterizerType == AliEMCALRecParam::kClusterizerNxN && !strcmp(fgClusterizer->Version(),"clu-NxN")) return;
200
201 //Need to create new clusterizer, the one set previously is not the correct one
202 delete fgClusterizer;
203 }
204 else return;
205 }
29c9d15f 206
9519e3e3 207 if (clusterizerType == AliEMCALRecParam::kClusterizerv1)
29c9d15f 208 {
209 fgClusterizer = new AliEMCALClusterizerv1(fGeom, fCalibData,fPedestalData);
210 }
9519e3e3 211 else
29c9d15f 212 {
213 fgClusterizer = new AliEMCALClusterizerNxN(fGeom, fCalibData,fPedestalData);
214 }
ee08edde 215}
216
217//____________________________________________________________________________
c47157cd 218void AliEMCALReconstructor::Reconstruct(TTree* digitsTree, TTree* clustersTree) const
f6019cda 219{
220 // method called by AliReconstruction;
221 // Only the clusterization is performed,; the rest of the reconstruction is done in FillESD because the track
222 // segment maker needs access to the AliESD object to retrieve the tracks reconstructed by
223 // the global tracking.
c47157cd 224 // Works on the current event.
29c9d15f 225
1a429a6b 226 AliCodeTimerAuto("",0)
29c9d15f 227
228 //Get input digits and put them in fgDigitsArr, clear the list before
85c25c2e 229 ReadDigitsArrayFromTree(digitsTree);
29c9d15f 230
9519e3e3 231 InitClusterizer();
232
0832a2bf 233 fgClusterizer->InitParameters();
4601e3a7 234 fgClusterizer->SetOutput(clustersTree);
9519e3e3 235
e853f058 236 //Skip clusterization of LED events
237 if (GetRecParam()->GetEventSpecie()!=AliRecoParam::kCalib){
9517d886 238
29c9d15f 239 if(fgDigitsArr && fgDigitsArr->GetEntries()) {
240
241 fgClusterizer->SetInput(digitsTree);
242
243 //fgClusterizer->Digits2Clusters("deb all") ; //For debugging
244 fgClusterizer->Digits2Clusters("");
245
246 fgClusterizer->Clear();
247
248 }//digits array exists and has somethind
e853f058 249 }//not a LED event
29c9d15f 250
916f1e76 251 clustersTree->Fill();
f6019cda 252}
253
254//____________________________________________________________________________
c47157cd 255void AliEMCALReconstructor::ConvertDigits(AliRawReader* rawReader, TTree* digitsTree) const
29c9d15f 256
a68156e6 257{
c47157cd 258 // Conversion from raw data to
259 // EMCAL digits.
260 // Works on a single-event basis
29c9d15f 261
98e9578e 262 rawReader->Reset() ;
29c9d15f 263
de39a0ff 264 fTriggerData->SetMode(1);
29c9d15f 265
b57cc9b9 266 if(fgDigitsArr) fgDigitsArr->Clear("C");
29c9d15f 267
de39a0ff 268 TClonesArray *digitsTrg = new TClonesArray("AliEMCALTriggerRawDigit", 32 * 96);
29c9d15f 269
c47157cd 270 Int_t bufsize = 32000;
b57cc9b9 271 digitsTree->Branch("EMCAL", &fgDigitsArr, bufsize);
916f1e76 272 digitsTree->Branch("EMTRG", &digitsTrg, bufsize);
29c9d15f 273
e853f058 274 //Skip calibration events do the rest
275 Bool_t doFit = kTRUE;
276 if ( !(GetRecParam()->FitLEDEvents()) && GetRecParam()->GetEventSpecie()==AliRecoParam::kCalib) doFit = kFALSE;
277 if (doFit){
29c9d15f 278 //must be done here because, in constructor, option is not yet known
279 fgRawUtils->SetOption(GetOption());
280
281 fgRawUtils->SetRawFormatHighLowGainFactor(GetRecParam()->GetHighLowGainFactor());
282 fgRawUtils->SetRawFormatOrder(GetRecParam()->GetOrderParameter());
283 fgRawUtils->SetRawFormatTau(GetRecParam()->GetTau());
284 fgRawUtils->SetNoiseThreshold(GetRecParam()->GetNoiseThreshold());
285 fgRawUtils->SetNPedSamples(GetRecParam()->GetNPedSamples());
286 fgRawUtils->SetRemoveBadChannels(GetRecParam()->GetRemoveBadChannels());
287 fgRawUtils->SetFittingAlgorithm(GetRecParam()->GetFittingAlgorithm());
288 fgRawUtils->SetFALTROUsage(GetRecParam()->UseFALTRO());
289 fgRawUtils->SetTimeMin(GetRecParam()->GetTimeMin());
290 fgRawUtils->SetTimeMax(GetRecParam()->GetTimeMax());
291
292 fgRawUtils->Raw2Digits(rawReader,fgDigitsArr,fPedestalData,digitsTrg,fTriggerData);
793176c1 293 }//skip calibration event
e853f058 294 else{
29c9d15f 295 AliDebug(1," Calibration Event, skip!");
e853f058 296 }
29c9d15f 297
c615db53 298 digitsTree->Fill();
916f1e76 299 digitsTrg->Delete();
916f1e76 300 delete digitsTrg;
29c9d15f 301
a68156e6 302}
303
85c25c2e 304
a68156e6 305//____________________________________________________________________________
0e7c6655 306void AliEMCALReconstructor::FillESD(TTree* digitsTree, TTree* clustersTree,
c47157cd 307 AliESDEvent* esd) const
f6019cda 308{
98e9578e 309 // Called by AliReconstruct after Reconstruct() and global tracking and vertexing
85c25c2e 310 // and V0
c47157cd 311 // Works on the current event
de39a0ff 312 // printf(" ## AliEMCALReconstructor::FillESD() is started ### \n ");
85c25c2e 313 //return;
29c9d15f 314
7ba18c0e 315 //########################################
316 // Trigger
317 //########################################
de39a0ff 318
29c9d15f 319 Int_t v0M[2] = {0, 0};
320
321 AliESDVZERO* esdV0 = esd->GetVZEROData();
322
323 if (esdV0)
324 {
325 for (Int_t i = 0; i < 32; i++)
326 {
327 v0M[0] += (Int_t)esdV0->GetAdcV0C(i);
328 v0M[1] += (Int_t)esdV0->GetAdcV0A(i);
329 }
330 }
331 else
332 {
333 AliWarning("Cannot retrieve V0 ESD! Run w/ null V0 charges");
334 }
335
336 if (fgTriggerDigits) fgTriggerDigits->Clear();
337
338 TBranch *branchtrg = digitsTree->GetBranch("EMTRG");
339
340 if (!branchtrg)
341 {
342 AliError("Can't get the branch with the EMCAL trigger digits!");
343 return;
344 }
345
346 branchtrg->SetAddress(&fgTriggerDigits);
347 branchtrg->GetEntry(0);
348
349 // Note: fgTriggerProcessor reset done at the end of this method
350 fgTriggerProcessor->Digits2Trigger(fgTriggerDigits, v0M, fTriggerData);
351
352 // Fill ESD
353 AliESDCaloTrigger* trgESD = esd->GetCaloTrigger("EMCAL");
354
355 if (trgESD)
356 {
357 trgESD->Allocate(fgTriggerDigits->GetEntriesFast());
358
359 for (Int_t i = 0; i < fgTriggerDigits->GetEntriesFast(); i++)
360 {
361 AliEMCALTriggerRawDigit* rdig = (AliEMCALTriggerRawDigit*)fgTriggerDigits->At(i);
de39a0ff 362
29c9d15f 363 Int_t px, py;
364 if (fGeom->GetPositionInEMCALFromAbsFastORIndex(rdig->GetId(), px, py))
365 {
366 Int_t a = -1, t = -1, times[10];
367
368 rdig->GetMaximum(a, t);
369 rdig->GetL0Times(times);
370
371 trgESD->Add(px, py, a, t, times, rdig->GetNL0Times(), rdig->GetL1TimeSum(), rdig->GetTriggerBits());
372 }
373 }
374
375 trgESD->SetL1Threshold(0, fTriggerData->GetL1GammaThreshold());
376
377 trgESD->SetL1Threshold(1, fTriggerData->GetL1JetThreshold() );
378 }
379
380 // Resetting
381 fTriggerData->Reset();
de39a0ff 382
0e7c6655 383 //########################################
384 //##############Fill CaloCells###############
385 //########################################
29c9d15f 386
387 //Get input digits and put them in fgDigitsArr, clear the list before
b57cc9b9 388 ReadDigitsArrayFromTree(digitsTree);
29c9d15f 389
b57cc9b9 390 Int_t nDigits = fgDigitsArr->GetEntries(), idignew = 0 ;
0e7c6655 391 AliDebug(1,Form("%d digits",nDigits));
29c9d15f 392
0e7c6655 393 AliESDCaloCells &emcCells = *(esd->GetEMCALCells());
394 emcCells.CreateContainer(nDigits);
c8fe2783 395 emcCells.SetType(AliVCaloCells::kEMCALCell);
0c5b726e 396 Float_t energy = 0;
0e7c6655 397 for (Int_t idig = 0 ; idig < nDigits ; idig++) {
b57cc9b9 398 const AliEMCALDigit * dig = (const AliEMCALDigit*)fgDigitsArr->At(idig);
829ba234 399 if(dig->GetAmplitude() > 0 ){
29c9d15f 400 energy = fgClusterizer->Calibrate(dig->GetAmplitude(),dig->GetTime(),dig->GetId()); //TimeR or Time?
401 if(energy > 0){ //Digits tagged as bad (dead, hot, not alive) are set to 0 in calibrate, remove them
402 emcCells.SetCell(idignew,dig->GetId(),energy, dig->GetTime());
403 idignew++;
404 }
0e7c6655 405 }
406 }
407 emcCells.SetNumberOfCells(idignew);
408 emcCells.Sort();
29c9d15f 409
0e7c6655 410 //------------------------------------------------------------
411 //-----------------CLUSTERS-----------------------------
412 //------------------------------------------------------------
9dce5a21 413 clustersTree->SetBranchStatus("*",0); //disable all branches
414 clustersTree->SetBranchStatus("EMCALECARP",1); //Enable only the branch we need
b57cc9b9 415 if(fgClustersArr) fgClustersArr->Clear();
0e7c6655 416 TBranch *branch = clustersTree->GetBranch("EMCALECARP");
b57cc9b9 417 branch->SetAddress(&fgClustersArr);
9dce5a21 418 branch->GetEntry(0);
419 //clustersTree->GetEvent(0);
29c9d15f 420
b57cc9b9 421 Int_t nClusters = fgClustersArr->GetEntries(), nClustersNew=0;
0e7c6655 422 AliDebug(1,Form("%d clusters",nClusters));
29c9d15f 423
6a0cf740 424 //######################################################
425 //#######################TRACK MATCHING###############
426 //######################################################
427 //Fill list of integers, each one is index of track to which the cluster belongs.
29c9d15f 428
6a0cf740 429 // step 1 - initialize array of matched track indexes
430 Int_t *matchedTrack = new Int_t[nClusters];
431 for (Int_t iclus = 0; iclus < nClusters; iclus++)
432 matchedTrack[iclus] = -1; // neg. index --> no matched track
433
434 // step 2, change the flag for all matched clusters found in tracks
435 Int_t iemcalMatch = -1;
436 Int_t endtpc = esd->GetNumberOfTracks();
437 for (Int_t itrack = 0; itrack < endtpc; itrack++) {
438 AliESDtrack * track = esd->GetTrack(itrack) ; // retrieve track
439 iemcalMatch = track->GetEMCALcluster();
65f4a419 440 if(iemcalMatch >= 0) matchedTrack[iemcalMatch] = itrack;
6a0cf740 441 }
85c25c2e 442
6a0cf740 443 //########################################
85c25c2e 444 //##############Fill CaloClusters#############
6a0cf740 445 //########################################
5dee926e 446 for (Int_t iClust = 0 ; iClust < nClusters ; iClust++) {
b57cc9b9 447 const AliEMCALRecPoint * clust = (const AliEMCALRecPoint*)fgClustersArr->At(iClust);
c8fe2783 448 //if(clust->GetClusterType()== AliVCluster::kEMCALClusterv1) nRP++; else nPC++;
29c9d15f 449 // clust->Print(); //For debugging
a7a5421e 450 // Get information from EMCAL reconstruction points
85c60a8e 451 Float_t xyz[3];
5dee926e 452 TVector3 gpos;
453 clust->GetGlobalPosition(gpos);
35397e76 454 for (Int_t ixyz=0; ixyz<3; ixyz++)
5dee926e 455 xyz[ixyz] = gpos[ixyz];
85c25c2e 456 Float_t elipAxis[2];
457 clust->GetElipsAxis(elipAxis);
29c9d15f 458 //Create digits lists
35397e76 459 Int_t cellMult = clust->GetMultiplicity();
460 //TArrayS digiList(digitMult);
461 Float_t *amplFloat = clust->GetEnergiesList();
462 Int_t *digitInts = clust->GetAbsId();
463 TArrayS absIdList(cellMult);
eb972628 464 TArrayD fracList(cellMult);
29c9d15f 465
35397e76 466 Int_t newCellMult = 0;
467 for (Int_t iCell=0; iCell<cellMult; iCell++) {
468 if (amplFloat[iCell] > 0) {
29c9d15f 469 absIdList[newCellMult] = (UShort_t)(digitInts[iCell]);
470 //Calculate Fraction
471 if(emcCells.GetCellAmplitude(digitInts[iCell])>0 && GetRecParam()->GetUnfold()){
472 fracList[newCellMult] = amplFloat[iCell]/(emcCells.GetCellAmplitude(digitInts[iCell]));//get cell calibration value
473
474 }
475 else{
476 fracList[newCellMult] = 0;
477 }
478 newCellMult++;
92da3372 479 }
92da3372 480 }
29c9d15f 481
eb972628 482 absIdList.Set(newCellMult);
483 fracList.Set(newCellMult);
484
35397e76 485 if(newCellMult > 0) { // accept cluster if it has some digit
486 nClustersNew++;
65721814 487 //Primaries
7592dfc4 488 Int_t parentMult = 0;
fa42b1f3 489 Int_t *parentList = clust->GetParents(parentMult);
a7a5421e 490 // fills the ESDCaloCluster
35397e76 491 AliESDCaloCluster * ec = new AliESDCaloCluster() ;
c8fe2783 492 ec->SetType(AliVCluster::kEMCALClusterv1);
7592dfc4 493 ec->SetPosition(xyz);
494 ec->SetE(clust->GetEnergy());
29c9d15f 495
ee08edde 496 //Distance to the nearest bad crystal
497 ec->SetDistanceToBadChannel(clust->GetDistanceToBadTower());
29c9d15f 498
35397e76 499 ec->SetNCells(newCellMult);
500 //Change type of list from short to ushort
501 UShort_t *newAbsIdList = new UShort_t[newCellMult];
ee08edde 502 Double_t *newFracList = new Double_t[newCellMult];
35397e76 503 for(Int_t i = 0; i < newCellMult ; i++) {
504 newAbsIdList[i]=absIdList[i];
de39a0ff 505 newFracList[i] =fracList[i];
35397e76 506 }
507 ec->SetCellsAbsId(newAbsIdList);
eb972628 508 ec->SetCellsAmplitudeFraction(newFracList);
c8fe2783 509 ec->SetDispersion(clust->GetDispersion());
510 ec->SetChi2(-1); //not yet implemented
35397e76 511 ec->SetM02(elipAxis[0]*elipAxis[0]) ;
512 ec->SetM20(elipAxis[1]*elipAxis[1]) ;
78902954 513 ec->SetTOF(clust->GetTime()) ; //time-of-fligh
225cd96d 514 ec->SetNExMax(clust->GetNExMax()); //number of local maxima
35397e76 515 TArrayI arrayTrackMatched(1);// Only one track, temporal solution.
516 arrayTrackMatched[0]= matchedTrack[iClust];
517 ec->AddTracksMatched(arrayTrackMatched);
29c9d15f 518
35397e76 519 TArrayI arrayParents(parentMult,parentList);
520 ec->AddLabels(arrayParents);
29c9d15f 521
6a0cf740 522 // add the cluster to the esd object
eb972628 523 esd->AddCaloCluster(ec);
a7a5421e 524 delete ec;
85d4cbde 525 delete [] newAbsIdList ;
eb972628 526 delete [] newFracList ;
29c9d15f 527 }
528 } // cycle on clusters
529
530 delete [] matchedTrack;
531
532 //Fill ESDCaloCluster with PID weights
533 AliEMCALPID *pid = new AliEMCALPID;
534 //pid->SetPrintInfo(kTRUE);
535 pid->SetReconstructor(kTRUE);
536 pid->RunPID(esd);
537 delete pid;
538
539 //Store EMCAL misalignment matrixes
540 FillMisalMatrixes(esd) ;
541
0c5b726e 542}
543
544//==================================================================================
545void AliEMCALReconstructor::FillMisalMatrixes(AliESDEvent* esd)const{
29c9d15f 546 //Store EMCAL matrixes in ESD Header
547
548 //Check, if matrixes was already stored
549 for(Int_t sm = 0 ; sm < fGeom->GetNumberOfSuperModules(); sm++){
550 if(esd->GetEMCALMatrix(sm)!=0)
551 return ;
552 }
553
554 //Create and store matrixes
555 if(!gGeoManager){
556 AliError("Can not store misal. matrixes: no gGeoManager! \n") ;
557 return ;
558 }
559 //Note, that owner of copied marixes will be header
7e1d9a9b 560 const Int_t bufsize = 255;
29c9d15f 561 char path[bufsize] ;
562 TGeoHMatrix * m = 0x0;
563 for(Int_t sm = 0; sm < fGeom->GetNumberOfSuperModules(); sm++){
564 snprintf(path,bufsize,"/ALIC_1/XEN1_1/SMOD_%d",sm+1) ; //In Geometry modules numbered 1,2,.,5
565 if(sm >= 10) snprintf(path,bufsize,"/ALIC_1/XEN1_1/SM10_%d",sm-10+1) ;
566
567 if (gGeoManager->CheckPath(path)){
568 gGeoManager->cd(path);
569 m = gGeoManager->GetCurrentMatrix() ;
570 // printf("================================================= \n");
571 // printf("AliEMCALReconstructor::FixMisalMatrixes(), sm %d, \n",sm);
572 // m->Print("");
573 esd->SetEMCALMatrix(new TGeoHMatrix(*m),sm) ;
574 // printf("================================================= \n");
575 }
576 else{
577 esd->SetEMCALMatrix(NULL,sm) ;
578 }
579 }
f6019cda 580}
dc293ae9 581
9517d886 582//__________________________________________________________________________
85c25c2e 583void AliEMCALReconstructor::ReadDigitsArrayFromTree(TTree *digitsTree) const
584{
29c9d15f 585 // Read the digits from the input tree
586 // See AliEMCALClusterizer::SetInput(TTree *digitsTree);
587
588 // Clear previous digits in the list
589 if(fgDigitsArr){
b57cc9b9 590 fgDigitsArr->Clear("C");
85c25c2e 591 }
29c9d15f 592 else{
593 // It should not happen, but just in case ...
594 fgDigitsArr = new TClonesArray("AliEMCALDigit",100);
595 }
596
85c25c2e 597 // Read the digits from the input tree
598 TBranch *branch = digitsTree->GetBranch("EMCAL");
599 if (!branch) {
600 AliError("can't get the branch with the EMCAL digits !");
601 return;
29c9d15f 602 }
603
85c25c2e 604 branch->SetAddress(&fgDigitsArr);
605 branch->GetEntry(0);
606}
98e9578e 607
916f1e76 608