standardized and extend the access to data in the macro
[u/mrichter/AliRoot.git] / ITS / AliITSClusterFinderV2SDD.cxx
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04366a57 1/**************************************************************************
2 * Copyright(c) 1998-2003, ALICE Experiment at CERN, All rights reserved. *
3 * *
4 * Author: The ALICE Off-line Project. *
5 * Contributors are mentioned in the code where appropriate. *
6 * *
7 * Permission to use, copy, modify and distribute this software and its *
8 * documentation strictly for non-commercial purposes is hereby granted *
9 * without fee, provided that the above copyright notice appears in all *
10 * copies and that both the copyright notice and this permission notice *
11 * appear in the supporting documentation. The authors make no claims *
12 * about the suitability of this software for any purpose. It is *
13 * provided "as is" without express or implied warranty. *
14 **************************************************************************/
d76cb3ad 15
16/* $Id$*/
17
04366a57 18////////////////////////////////////////////////////////////////////////////
19// Implementation of the ITS clusterer V2 class //
20// //
21// Origin: Iouri Belikov, CERN, Jouri.Belikov@cern.ch //
22// //
23///////////////////////////////////////////////////////////////////////////
24
25
04366a57 26
ae485645 27#include <TClonesArray.h>
04366a57 28#include "AliITSClusterFinderV2SDD.h"
00a7cc50 29#include "AliITSRecPoint.h"
7d62fb64 30#include "AliITSDetTypeRec.h"
04366a57 31#include "AliRawReader.h"
0599a018 32#include "AliITSRawStreamSDD.h"
2f8ed7ab 33#include "AliITSRawStreamSDDCompressed.h"
5bfe44ce 34#include "AliITSCalibrationSDD.h"
253e68a0 35#include "AliITSresponseSDD.h"
5bfe44ce 36#include "AliITSDetTypeRec.h"
debf7b78 37#include "AliITSReconstructor.h"
5bfe44ce 38#include "AliITSsegmentationSDD.h"
04366a57 39#include "AliITSdigitSDD.h"
b4704be3 40#include "AliITSgeomTGeo.h"
debf7b78 41
04366a57 42ClassImp(AliITSClusterFinderV2SDD)
43
4952f440 44AliITSClusterFinderV2SDD::AliITSClusterFinderV2SDD(AliITSDetTypeRec* dettyp):AliITSClusterFinderV2(dettyp)
a66a0eb6 45{
04366a57 46
47 //Default constructor
48
04366a57 49}
50
51
52void AliITSClusterFinderV2SDD::FindRawClusters(Int_t mod){
53
54 //Find clusters V2
55 SetModule(mod);
56 FindClustersSDD(fDigits);
57
58}
59
60void AliITSClusterFinderV2SDD::FindClustersSDD(TClonesArray *digits) {
61 //------------------------------------------------------------
62 // Actual SDD cluster finder
63 //------------------------------------------------------------
4952f440 64 Int_t nAnodes = GetSeg()->NpzHalf();
65 Int_t nzBins = nAnodes+2;
66 Int_t nTimeBins = GetSeg()->Npx();
67 Int_t nxBins = nTimeBins+2;
f6b6d58e 68 const Int_t kMaxBin=nzBins*nxBins;
04366a57 69
70 AliBin *bins[2];
4952f440 71 bins[0]=new AliBin[kMaxBin];
72 bins[1]=new AliBin[kMaxBin];
404c1c29 73 AliITSCalibrationSDD* cal = (AliITSCalibrationSDD*)GetResp(fModule);
9c7f5947 74 if(cal==0){
75 AliError(Form("Calibration object not present for SDD module %d\n",fModule));
76 return;
77 }
83ec5e27 78
04366a57 79 AliITSdigitSDD *d=0;
80 Int_t i, ndigits=digits->GetEntriesFast();
81 for (i=0; i<ndigits; i++) {
82 d=(AliITSdigitSDD*)digits->UncheckedAt(i);
20f3f947 83 Int_t ian=d->GetCoord1();
84 Int_t itb=d->GetCoord2();
85 Int_t iSide=0;
86 if (ian >= nAnodes) iSide=1;
75065a60 87 Float_t gain=cal->GetChannelGain(ian)/fDetTypeRec->GetAverageGainSDD();
83ec5e27 88 Float_t charge=d->GetSignal(); // returns expanded signal
89 // (10 bit, low threshold already added)
20f3f947 90 Float_t baseline = cal->GetBaseline(ian);
91 if(charge>baseline) charge-=baseline;
92 else charge=0;
5683bd96 93
9c7f5947 94 if(gain>0.){ // Bad channels have gain=0.
95 charge/=gain;
20f3f947 96 if(charge<cal->GetThresholdAnode(ian)) continue;
9c7f5947 97 Int_t q=(Int_t)(charge+0.5);
20f3f947 98 Int_t y=itb+1;
99 Int_t z=ian+1;
9c7f5947 100 if (z <= nAnodes){
101 bins[0][y*nzBins+z].SetQ(q);
102 bins[0][y*nzBins+z].SetMask(1);
103 bins[0][y*nzBins+z].SetIndex(i);
104 } else {
105 z-=nAnodes;
106 bins[1][y*nzBins+z].SetQ(q);
107 bins[1][y*nzBins+z].SetMask(1);
108 bins[1][y*nzBins+z].SetIndex(i);
109 }
04366a57 110 }
111 }
112
4952f440 113 FindClustersSDD(bins, kMaxBin, nzBins, digits);
04366a57 114
115 delete[] bins[0];
116 delete[] bins[1];
117
118}
119
120void AliITSClusterFinderV2SDD::
121FindClustersSDD(AliBin* bins[2], Int_t nMaxBin, Int_t nzBins,
122 TClonesArray *digits, TClonesArray *clusters) {
123 //------------------------------------------------------------
124 // Actual SDD cluster finder
125 //------------------------------------------------------------
b4704be3 126
debf7b78 127 static AliITSRecoParam *repa = NULL;
128 if(!repa){
129 repa = (AliITSRecoParam*) AliITSReconstructor::GetRecoParam();
130 if(!repa){
ed446fa3 131 repa = AliITSRecoParam::GetHighFluxParam();
debf7b78 132 AliWarning("Using default AliITSRecoParam class");
133 }
134 }
b4704be3 135 const TGeoHMatrix *mT2L=AliITSgeomTGeo::GetTracking2LocalMatrix(fModule);
404c1c29 136 AliITSCalibrationSDD* cal = (AliITSCalibrationSDD*)GetResp(fModule);
9c7f5947 137 if(cal==0){
138 AliError(Form("Calibration object not present for SDD module %d\n",fModule));
139 return;
140 }
04366a57 141 Int_t ncl=0;
142 TClonesArray &cl=*clusters;
143 for (Int_t s=0; s<2; s++)
144 for (Int_t i=0; i<nMaxBin; i++) {
e3ee4984 145 NoiseSuppress(i,s,nzBins,bins[s],cal);
04366a57 146 if (bins[s][i].IsUsed()) continue;
147 Int_t idx[32]; UInt_t msk[32]; Int_t npeaks=0;
148 FindPeaks(i, nzBins, bins[s], idx, msk, npeaks);
149
150 if (npeaks>30) continue;
151 if (npeaks==0) continue;
152
153 Int_t k,l;
154 for (k=0; k<npeaks-1; k++){//mark adjacent peaks
155 if (idx[k] < 0) continue; //this peak is already removed
156 for (l=k+1; l<npeaks; l++) {
f6b6d58e 157 if (idx[l] < 0) continue; //this peak is already removed
158 Int_t ki=idx[k]/nzBins, kj=idx[k] - ki*nzBins;
159 Int_t li=idx[l]/nzBins, lj=idx[l] - li*nzBins;
160 Int_t di=TMath::Abs(ki - li);
161 Int_t dj=TMath::Abs(kj - lj);
162 if (di>1 || dj>1) continue;
163 if (bins[s][idx[k]].GetQ() > bins[s][idx[l]].GetQ()) {
164 msk[l]=msk[k];
165 idx[l]*=-1;
166 } else {
167 msk[k]=msk[l];
168 idx[k]*=-1;
169 break;
170 }
04366a57 171 }
172 }
173
174 for (k=0; k<npeaks; k++) {
debf7b78 175 if(repa->GetUseUnfoldingInClusterFinderSDD()==kFALSE) msk[k]=msk[0];
04366a57 176 MarkPeak(TMath::Abs(idx[k]), nzBins, bins[s], msk[k]);
177 }
178
179 for (k=0; k<npeaks; k++) {
f6b6d58e 180 if (idx[k] < 0) continue; //removed peak
181 AliITSRecPoint c;
182 MakeCluster(idx[k], nzBins, bins[s], msk[k], c);
183 //mi change
184 Int_t milab[10];
185 for (Int_t ilab=0;ilab<10;ilab++){
186 milab[ilab]=-2;
187 }
188 Int_t maxi=0,mini=0,maxj=0,minj=0;
189 //AliBin *bmax=&bins[s][idx[k]];
190 //Float_t max = TMath::Max(TMath::Abs(bmax->GetQ())/5.,3.);
191
192 for (Int_t di=-2; di<=2;di++){
193 for (Int_t dj=-3;dj<=3;dj++){
194 Int_t index = idx[k]+di+dj*nzBins;
195 if (index<0) continue;
196 if (index>=nMaxBin) continue;
197 AliBin *b=&bins[s][index];
198 Int_t nAnode=index%nzBins-1;
199 Int_t adcSignal=b->GetQ();
200 if(adcSignal>cal->GetThresholdAnode(nAnode)){
201 if (di>maxi) maxi=di;
202 if (di<mini) mini=di;
203 if (dj>maxj) maxj=dj;
204 if (dj<minj) minj=dj;
205 }
206 //
207 if(digits) {
208 if (TMath::Abs(di)<2&&TMath::Abs(dj)<2){
209 AliITSdigitSDD* d=(AliITSdigitSDD*)digits->UncheckedAt(b->GetIndex());
210 for (Int_t itrack=0;itrack<10;itrack++){
211 Int_t track = (d->GetTracks())[itrack];
212 if (track>=0) {
213 AddLabel(milab, track);
214 }
215 }
216 }
217 }
218 }
219 }
220
221
253e68a0 222 AliITSresponseSDD* rsdd = fDetTypeRec->GetResponseSDD();
223 Float_t y=c.GetY(),z=c.GetZ(), q=c.GetQ();
f6b6d58e 224 y/=q; z/=q;
225 Float_t zAnode=z-0.5; // to have anode in range 0.-255. and centered on the mid of the pitch
226 Float_t timebin=y-0.5; // to have time bin in range 0.-255. amd centered on the mid of the bin
227 if(s==1) zAnode += GetSeg()->NpzHalf(); // right side has anodes from 256. to 511.
228 Float_t zdet = GetSeg()->GetLocalZFromAnode(zAnode);
b2558977 229 Float_t driftTimeUncorr = GetSeg()->GetDriftTimeFromTb(timebin);
230 Float_t driftTime=driftTimeUncorr-rsdd->GetTimeOffset();
f6b6d58e 231 Float_t driftPathMicron = cal->GetDriftPath(driftTime,zAnode);
232 const Double_t kMicronTocm = 1.0e-4;
233 Float_t xdet=(driftPathMicron-GetSeg()->Dx())*kMicronTocm; // xdet is negative
234 if (s==0) xdet=-xdet; // left side has positive local x
c9a38d3d 235
236 Float_t corrx=0, corrz=0;
237 cal->GetCorrections(zdet,xdet,corrz,corrx,GetSeg());
238 zdet+=corrz;
239 xdet+=corrx;
f6b6d58e 240
241 Double_t loc[3]={xdet,0.,zdet},trk[3]={0.,0.,0.};
242 mT2L->MasterToLocal(loc,trk);
243 y=trk[1];
244 z=trk[2];
245
253e68a0 246 q/=rsdd->GetADC2keV(); //to have MPV 1 MIP = 86.4 KeV
f6b6d58e 247 Float_t hit[5] = {y, z, 0.0030*0.0030, 0.0020*0.0020, q};
248 Int_t info[3] = {maxj-minj+1, maxi-mini+1, fNlayer[fModule]};
249 if (digits) {
250 // AliBin *b=&bins[s][idx[k]];
251 // AliITSdigitSDD* d=(AliITSdigitSDD*)digits->UncheckedAt(b->GetIndex());
252 {
253 //Int_t lab[3];
254 //lab[0]=(d->GetTracks())[0];
255 //lab[1]=(d->GetTracks())[1];
256 //lab[2]=(d->GetTracks())[2];
257 //CheckLabels(lab);
258 CheckLabels2(milab);
259 }
260 }
261 milab[3]=fNdet[fModule];
262
263 AliITSRecPoint cc(milab,hit,info);
264 cc.SetType(npeaks);
b2558977 265 cc.SetDriftTime(driftTimeUncorr);
f6b6d58e 266 if(clusters) new (cl[ncl]) AliITSRecPoint(cc);
267 else {
268 fDetTypeRec->AddRecPoint(cc);
269 }
270 ncl++;
04366a57 271 }
272 }
24c98369 273
04366a57 274}
f6b6d58e 275//______________________________________________________________________
04366a57 276void AliITSClusterFinderV2SDD::RawdataToClusters(AliRawReader* rawReader,TClonesArray** clusters){
277 //------------------------------------------------------------
278 // This function creates ITS clusters from raw data
279 //------------------------------------------------------------
280 rawReader->Reset();
2f8ed7ab 281 AliITSRawStream* inputSDD;
282 if(fDetTypeRec->IsHLTmodeC()==kTRUE){
283 inputSDD=new AliITSRawStreamSDDCompressed(rawReader);
284 }else{
285 inputSDD=new AliITSRawStreamSDD(rawReader);
286 }
287
979b5a5f 288 AliITSDDLModuleMapSDD *ddlmap=(AliITSDDLModuleMapSDD*)fDetTypeRec->GetDDLModuleMapSDD();
2f8ed7ab 289 inputSDD->SetDDLModuleMap(ddlmap);
83ec5e27 290 for(Int_t iddl=0; iddl<AliITSDDLModuleMapSDD::GetNDDLs(); iddl++){
291 for(Int_t icar=0; icar<AliITSDDLModuleMapSDD::GetNModPerDDL();icar++){
292 Int_t iMod=ddlmap->GetModuleNumber(iddl,icar);
293 if(iMod==-1) continue;
294 AliITSCalibrationSDD* cal = (AliITSCalibrationSDD*)GetResp(iMod);
295 if(cal==0){
296 AliError(Form("Calibration object not present for SDD module %d\n",iMod));
297 continue;
298 }
253e68a0 299 Bool_t isZeroSupp=cal->GetZeroSupp();
300 if(isZeroSupp){
2f8ed7ab 301 for(Int_t iSid=0; iSid<2; iSid++) inputSDD->SetZeroSuppLowThreshold(iMod-240,iSid,cal->GetZSLowThreshold(iSid));
83ec5e27 302 }else{
2f8ed7ab 303 for(Int_t iSid=0; iSid<2; iSid++) inputSDD->SetZeroSuppLowThreshold(iMod-240,iSid,0);
83ec5e27 304 }
305 }
306 }
2f8ed7ab 307 FindClustersSDD(inputSDD,clusters);
308 delete inputSDD;
04366a57 309}
310
311void AliITSClusterFinderV2SDD::FindClustersSDD(AliITSRawStream* input,
312 TClonesArray** clusters)
313{
314 //------------------------------------------------------------
315 // Actual SDD cluster finder for raw data
316 //------------------------------------------------------------
317 Int_t nClustersSDD = 0;
4952f440 318 Int_t nAnodes = GetSeg()->NpzHalf();
319 Int_t nzBins = nAnodes+2;
320 Int_t nTimeBins = GetSeg()->Npx();
321 Int_t nxBins = nTimeBins+2;
f6b6d58e 322 const Int_t kMaxBin=nzBins*nxBins;
ae485645 323 AliBin *bins[2];
93a93288 324 AliBin *ddlbins[kHybridsPerDDL]; // 12 modules (=24 hybrids) of 1 DDL read "in parallel"
325 for(Int_t iHyb=0;iHyb<kHybridsPerDDL;iHyb++) ddlbins[iHyb]=new AliBin[kMaxBin];
04366a57 326 // read raw data input stream
14dceddf 327 while (input->Next()) {
e4da2288 328 Int_t iModule = input->GetModuleID();
93a93288 329 if(iModule<0){
330 AliWarning(Form("Invalid SDD module number %d\n", iModule));
331 continue;
332 }
44c5b268 333
6297cc01 334 Int_t iCarlos =input->GetCarlosId();
335 Int_t iSide = input->GetChannel();
14dceddf 336 Int_t iHybrid=iCarlos*2+iSide;
337 if (input->IsCompletedModule()) {
04366a57 338 // when all data from a module was read, search for clusters
44c5b268 339 if(iCarlos<0){
340 AliWarning(Form("Invalid SDD carlos number %d on module %d\n", iCarlos,iModule));
341 continue;
342 }
343 clusters[iModule] = new TClonesArray("AliITSRecPoint");
344 fModule = iModule;
345 bins[0]=ddlbins[iCarlos*2]; // first hybrid of the completed module
346 bins[1]=ddlbins[iCarlos*2+1]; // second hybrid of the completed module
347 FindClustersSDD(bins, kMaxBin, nzBins, NULL, clusters[iModule]);
348 Int_t nClusters = clusters[iModule]->GetEntriesFast();
349 nClustersSDD += nClusters;
350 for(Int_t iBin=0;iBin<kMaxBin; iBin++){
351 ddlbins[iCarlos*2][iBin].Reset();
352 ddlbins[iCarlos*2+1][iBin].Reset();
353 }
5dfa68c5 354 }else{
04366a57 355 // fill the current digit into the bins array
44c5b268 356 if(iHybrid<0 || iHybrid>=kHybridsPerDDL){
357 AliWarning(Form("Invalid SDD hybrid number %d on module %d\n", iHybrid,iModule));
358 continue;
359 }
e4da2288 360 AliITSCalibrationSDD* cal = (AliITSCalibrationSDD*)GetResp(iModule);
9c7f5947 361 if(cal==0){
362 AliError(Form("Calibration object not present for SDD module %d\n",iModule));
363 continue;
364 }
5683bd96 365 Float_t charge=input->GetSignal();
14dceddf 366 Int_t chan=input->GetCoord1()+nAnodes*iSide;
75065a60 367 Float_t gain=cal->GetChannelGain(chan)/fDetTypeRec->GetAverageGainSDD();;
20f3f947 368 Float_t baseline = cal->GetBaseline(chan);
369 if(charge>baseline) charge-=baseline;
370 else charge=0;
9c7f5947 371 if(gain>0.){ // Bad channels have gain=0
372 charge/=gain;
373 if(charge>=cal->GetThresholdAnode(chan)) {
374 Int_t q=(Int_t)(charge+0.5);
375 Int_t iz = input->GetCoord1();
376 Int_t itb = input->GetCoord2();
377 Int_t index = (itb+1) * nzBins + (iz+1);
378 if(index<kMaxBin){
379 ddlbins[iHybrid][index].SetQ(q);
380 ddlbins[iHybrid][index].SetMask(1);
381 ddlbins[iHybrid][index].SetIndex(index);
382 }else{
383 AliWarning(Form("Invalid SDD cell: Anode=%d TimeBin=%d",iz,itb));
384 }
93a93288 385 }
5dfa68c5 386 }
04366a57 387 }
388 }
93a93288 389 for(Int_t iHyb=0;iHyb<kHybridsPerDDL;iHyb++) delete [] ddlbins[iHyb];
04366a57 390 Info("FindClustersSDD", "found clusters in ITS SDD: %d", nClustersSDD);
04366a57 391}
392
e3ee4984 393//______________________________________________________________________
394void AliITSClusterFinderV2SDD::NoiseSuppress(Int_t k, Int_t sid,Int_t nzBins, AliBin* bins, AliITSCalibrationSDD* cal) const {
395 // applies zero suppression using the measured noise of each anode
396 // threshold values from ALICE-INT-1999-28 V10
83ec5e27 397 Float_t xfactL=2.2;
398 Float_t xfactH=4.0;
e3ee4984 399 //
400
401 Int_t iAn=(k%nzBins)-1;
402 if(iAn<0 || iAn>255) return;
403 if(sid==1) iAn+=256;
404 Int_t nLow=0, nHigh=0;
405 Float_t noise=cal->GetNoiseAfterElectronics(iAn);
406 Float_t noisem1=noise;
407 if(iAn>1) noisem1=cal->GetNoiseAfterElectronics(iAn-1);
408 Float_t noisep1=noise;
409 if(iAn<511) noisep1=cal->GetNoiseAfterElectronics(iAn+1);
83ec5e27 410 Float_t tL=noise*xfactL;
411 Float_t tH=noise*xfactH;
412 Float_t tLp1=noisep1*xfactL;
413 Float_t tHp1=noisep1*xfactH;
414 Float_t tLm1=noisem1*xfactL;
415 Float_t tHm1=noisem1*xfactH;
e3ee4984 416 Float_t cC=bins[k].GetQ();
417 if(cC<=tL){
418 bins[k].SetQ(0);
419 bins[k].SetMask(0xFFFFFFFE);
420 return;
421 }
422 nLow++; // cC is greater than tL
423 if(cC>tH) nHigh++;
424 Int_t sS=bins[k-1].GetQ();
425 if(sS>tLm1) nLow++;
426 if(sS>tHm1) nHigh++;
427 Int_t nN=bins[k+1].GetQ();
428 if(nN>tLp1) nLow++;
429 if(nN>tHp1) nHigh++;
430 Int_t eE=bins[k-nzBins].GetQ();
431 if(eE>tL) nLow++;
432 if(eE>tH) nHigh++;
433 Int_t wW=bins[k+nzBins].GetQ();
434 if(wW>tL) nLow++;
435 if(wW>tH) nHigh++;
436 if(nLow<3 || nHigh<1){
437 bins[k].SetQ(0);
438 bins[k].SetMask(0xFFFFFFFE);
439 }
440}
441
04366a57 442
d97eb3fe 443