[u/mrichter/AliRoot.git] / ITS / AliITSClusterFinderV2SDD.cxx

/**************************************************************************
 * Copyright(c) 1998-2003, ALICE Experiment at CERN, All rights reserved. *
 *                                                                        *
 * Author: The ALICE Off-line Project.                                    *
 * Contributors are mentioned in the code where appropriate.              *
 *                                                                        *
 * Permission to use, copy, modify and distribute this software and its   *
 * documentation strictly for non-commercial purposes is hereby granted   *
 * without fee, provided that the above copyright notice appears in all   *
 * copies and that both the copyright notice and this permission notice   *
 * appear in the supporting documentation. The authors make no claims     *
 * about the suitability of this software for any purpose. It is          *
 * provided "as is" without express or implied warranty.                  *
 **************************************************************************/
////////////////////////////////////////////////////////////////////////////
//            Implementation of the ITS clusterer V2 class                //
//                                                                        //
//          Origin: Iouri Belikov, CERN, Jouri.Belikov@cern.ch            //
//                                                                        //
///////////////////////////////////////////////////////////////////////////


#include "AliITSClusterFinderV2SDD.h"
#include "AliITSRecPoint.h"
#include "AliITSDetTypeRec.h"
#include "AliRawReader.h"
#include "AliITSRawStreamSDD.h"
#include "AliITSCalibrationSDD.h"
#include "AliITSDetTypeRec.h"
#include "AliITSsegmentationSDD.h"
#include <TClonesArray.h>
#include "AliITSdigitSDD.h"

ClassImp(AliITSClusterFinderV2SDD)

extern AliRun *gAlice;

AliITSClusterFinderV2SDD::AliITSClusterFinderV2SDD(AliITSDetTypeRec* dettyp):AliITSClusterFinderV2(dettyp){

  //Default constructor

  fNySDD=256; fNzSDD=256;
  fYpitchSDD=0.01825;
  fZpitchSDD=0.02940;
  fHwSDD=3.5085; fHlSDD=3.7632;
  fYoffSDD=0.0425;


}
 

void AliITSClusterFinderV2SDD::FindRawClusters(Int_t mod){

  //Find clusters V2
  SetModule(mod);
  FindClustersSDD(fDigits);

}

void AliITSClusterFinderV2SDD::FindClustersSDD(TClonesArray *digits) {
  //------------------------------------------------------------
  // Actual SDD cluster finder
  //------------------------------------------------------------
  Int_t kNzBins = fNzSDD + 2;
  const Int_t kMAXBIN=kNzBins*(fNySDD+2);

  AliBin *bins[2];
  bins[0]=new AliBin[kMAXBIN];
  bins[1]=new AliBin[kMAXBIN];

  AliITSdigitSDD *d=0;
  Int_t i, ndigits=digits->GetEntriesFast();
  for (i=0; i<ndigits; i++) {
     d=(AliITSdigitSDD*)digits->UncheckedAt(i);
     Int_t y=d->GetCoord2()+1;   //y
     Int_t z=d->GetCoord1()+1;   //z
     Int_t q=d->GetSignal();
     if (q<3) continue;

     if (z <= fNzSDD) {
       bins[0][y*kNzBins+z].SetQ(q);
       bins[0][y*kNzBins+z].SetMask(1);
       bins[0][y*kNzBins+z].SetIndex(i);
     } else {
       z-=fNzSDD; 
       bins[1][y*kNzBins+z].SetQ(q);
       bins[1][y*kNzBins+z].SetMask(1);
       bins[1][y*kNzBins+z].SetIndex(i);
     }
  }
  
  FindClustersSDD(bins, kMAXBIN, kNzBins, digits);

  delete[] bins[0];
  delete[] bins[1];

}

void AliITSClusterFinderV2SDD::
FindClustersSDD(AliBin* bins[2], Int_t nMaxBin, Int_t nzBins, 
		TClonesArray *digits, TClonesArray *clusters) {
  //------------------------------------------------------------
  // Actual SDD cluster finder
  //------------------------------------------------------------
  Int_t ncl=0; 
  TClonesArray &cl=*clusters;
  for (Int_t s=0; s<2; s++)
    for (Int_t i=0; i<nMaxBin; i++) {
      if (bins[s][i].IsUsed()) continue;
      Int_t idx[32]; UInt_t msk[32]; Int_t npeaks=0;
      FindPeaks(i, nzBins, bins[s], idx, msk, npeaks);

      if (npeaks>30) continue;
      if (npeaks==0) continue;

      Int_t k,l;
      for (k=0; k<npeaks-1; k++){//mark adjacent peaks
        if (idx[k] < 0) continue; //this peak is already removed
        for (l=k+1; l<npeaks; l++) {
           if (idx[l] < 0) continue; //this peak is already removed
           Int_t ki=idx[k]/nzBins, kj=idx[k] - ki*nzBins;
           Int_t li=idx[l]/nzBins, lj=idx[l] - li*nzBins;
           Int_t di=TMath::Abs(ki - li);
           Int_t dj=TMath::Abs(kj - lj);
           if (di>1 || dj>1) continue;
           if (bins[s][idx[k]].GetQ() > bins[s][idx[l]].GetQ()) {
              msk[l]=msk[k];
              idx[l]*=-1;
           } else {
              msk[k]=msk[l];
              idx[k]*=-1;
              break;
           } 
        }
      }

      for (k=0; k<npeaks; k++) {
        MarkPeak(TMath::Abs(idx[k]), nzBins, bins[s], msk[k]);
      }
        
      for (k=0; k<npeaks; k++) {
         if (idx[k] < 0) continue; //removed peak
         AliITSRecPoint c(fDetTypeRec->GetITSgeom());
         MakeCluster(idx[k], nzBins, bins[s], msk[k], c);
	 //mi change
	 Int_t milab[10];
	 for (Int_t ilab=0;ilab<10;ilab++){
	   milab[ilab]=-2;
	 }
	 Int_t maxi=0,mini=0,maxj=0,minj=0;
	 //AliBin *bmax=&bins[s][idx[k]];
	 //Float_t max = TMath::Max(TMath::Abs(bmax->GetQ())/5.,3.);
	 Float_t max=3;
	 for (Int_t di=-2; di<=2;di++)
	   for (Int_t dj=-3;dj<=3;dj++){
	     Int_t index = idx[k]+di+dj*nzBins;
	     if (index<0) continue;
	     if (index>=nMaxBin) continue;
	     AliBin *b=&bins[s][index];
	     if (TMath::Abs(b->GetQ())>max){
	       if (di>maxi) maxi=di;
	       if (di<mini) mini=di;
	       if (dj>maxj) maxj=dj;
	       if (dj<minj) minj=dj;
	       //
	       if(digits) {
		 if (TMath::Abs(di)<2&&TMath::Abs(dj)<2){
		   AliITSdigitSDD* d=(AliITSdigitSDD*)digits->UncheckedAt(b->GetIndex());
		   for (Int_t itrack=0;itrack<10;itrack++){
		     Int_t track = (d->GetTracks())[itrack];
		     if (track>=0) {
		       AddLabel(milab, track); 
		     }
		   }
		 }
	       }
	     }
	   }
	 
	 /* 
	    Float_t s2 = c.GetSigmaY2()/c.GetQ() - c.GetY()*c.GetY();
	    Float_t w=par->GetPadPitchWidth(sec);
	    c.SetSigmaY2(s2);
	    if (s2 != 0.) {
	    c.SetSigmaY2(c.GetSigmaY2()*0.108);
	    if (sec<par->GetNInnerSector()) c.SetSigmaY2(c.GetSigmaY2()*2.07);
	    }	 
	    s2 = c.GetSigmaZ2()/c.GetQ() - c.GetZ()*c.GetZ();
	    w=par->GetZWidth();
	    c.SetSigmaZ2(s2);
	    
	    if (s2 != 0.) {
	    c.SetSigmaZ2(c.GetSigmaZ2()*0.169);
	    if (sec<par->GetNInnerSector()) c.SetSigmaZ2(c.GetSigmaZ2()*1.77);
	    }
	 */

         c.SetSigmaY2(0.0030*0.0030);
         c.SetSigmaZ2(0.0020*0.0020);
         c.SetDetectorIndex(fNdet[fModule]);

         Float_t y=c.GetY(),z=c.GetZ(), q=c.GetQ();
         y/=q; z/=q;
	 //
	 //Float_t s2 = c.GetSigmaY2()/c.GetQ() - y*y;
	 // c.SetSigmaY2(s2);
	 //s2 = c.GetSigmaZ2()/c.GetQ() - z*z;
         //c.SetSigmaZ2(s2);
	 //
         y=(y-0.5)*fYpitchSDD;
         y-=fHwSDD;
         y-=fYoffSDD;  //delay ?
         if (s) y=-y;

         z=(z-0.5)*fZpitchSDD;
         z-=fHlSDD;

         y=-(-y+fYshift[fModule]);
         z=  -z+fZshift[fModule];
	 //      c.SetY(y);
	 //  c.SetZ(z);
	 CorrectPosition(z,y);
	 c.SetYZ(fModule,y,z);
	 c.SetNy(maxj-minj+1);
	 c.SetNz(maxi-mini+1);
	 c.SetType(npeaks);
         c.SetQ(q/12.7);  //to be consistent with the SSD charges

         if (c.GetQ() < 20.) continue; //noise cluster
	 
	 if (digits) {	  
	   //	   AliBin *b=&bins[s][idx[k]];
	   //	   AliITSdigitSDD* d=(AliITSdigitSDD*)digits->UncheckedAt(b->GetIndex());
	   {
	     //Int_t lab[3];
	     //lab[0]=(d->GetTracks())[0];
	     //lab[1]=(d->GetTracks())[1];
	     //lab[2]=(d->GetTracks())[2];
	     //CheckLabels(lab);
	     CheckLabels2(milab); 
	     c.SetLabel(milab[0],0);
	     c.SetLabel(milab[1],1);
	     c.SetLabel(milab[2],2);
	     c.SetLayer(fNlayer[fModule]);
	   }
	 }
	 if(clusters) new (cl[ncl]) AliITSRecPoint(c); 
	 else {
	   fDetTypeRec->AddRecPoint(c);
	 }
	 ncl++;
      }
    }
}


void AliITSClusterFinderV2SDD::RawdataToClusters(AliRawReader* rawReader,TClonesArray** clusters){
    //------------------------------------------------------------
  // This function creates ITS clusters from raw data
  //------------------------------------------------------------
  rawReader->Reset();
  AliITSRawStreamSDD inputSDD(rawReader);
  FindClustersSDD(&inputSDD,clusters);

}

void AliITSClusterFinderV2SDD::FindClustersSDD(AliITSRawStream* input, 
					TClonesArray** clusters) 
{
  //------------------------------------------------------------
  // Actual SDD cluster finder for raw data
  //------------------------------------------------------------
  Int_t nClustersSDD = 0;
  Int_t kNzBins = fNzSDD + 2;
  Int_t kMaxBin = kNzBins * (fNySDD+2);
  AliBin *binsSDDInit = new AliBin[kMaxBin];
  AliBin *binsSDD1 = new AliBin[kMaxBin];
  AliBin *binsSDD2 = new AliBin[kMaxBin];
  AliBin* bins[2] = {NULL, NULL};

  // read raw data input stream
  while (kTRUE) {
    Bool_t next = input->Next();
    if (!next || input->IsNewModule()) {
      Int_t iModule = input->GetPrevModuleID();

      // when all data from a module was read, search for clusters
      if (bins[0]) { 
	clusters[iModule] = new TClonesArray("AliITSRecPoint");
	fModule = iModule;
	FindClustersSDD(bins, kMaxBin, kNzBins, NULL, clusters[iModule]);
	Int_t nClusters = clusters[iModule]->GetEntriesFast();
	nClustersSDD += nClusters;
	bins[0] = bins[1] = NULL;
	
      }

      if (!next) break;
      bins[0]=binsSDD1;
      bins[1]=binsSDD2;
      memcpy(binsSDD1,binsSDDInit,sizeof(AliBin)*kMaxBin);
      memcpy(binsSDD2,binsSDDInit,sizeof(AliBin)*kMaxBin);

    }

    // fill the current digit into the bins array
    if(input->GetSignal()>=3) {
      Int_t iz = input->GetCoord1()+1;
      Int_t side = ((iz <= fNzSDD) ? 0 : 1);
      iz -= side*fNzSDD;
      Int_t index = (input->GetCoord2()+1) * kNzBins + iz;
      bins[side][index].SetQ(input->GetSignal());
      bins[side][index].SetMask(1);
      bins[side][index].SetIndex(index);
    }
  }
  delete[] binsSDD1;
  delete[] binsSDD2;
  delete[] binsSDDInit;

  Info("FindClustersSDD", "found clusters in ITS SDD: %d", nClustersSDD);

}


//_________________________________________________________________________
void AliITSClusterFinderV2SDD::CorrectPosition(Float_t &z, Float_t&y){

  //correction of coordinates using the maps stored in the DB

  AliITSCalibrationSDD* cal = (AliITSCalibrationSDD*)GetResp(fModule);
  static const Int_t nbint = cal->GetMapTimeNBin();
  static const Int_t nbina = cal->Chips()*cal->Channels();
  Float_t stepa = (GetSeg()->Dpz(0))/10000.; //anode pitch in cm
  Float_t stept = (GetSeg()->Dx()/cal->GetMapTimeNBin()/2.)/10.;
  Float_t xdet,zdet;
  fDetTypeRec->GetITSgeom()->TrackingV2ToDetL(fModule,y,z,xdet,zdet);

  Int_t bint = TMath::Abs((Int_t)(xdet/stept));
  if(xdet>=0) bint+=(Int_t)(nbint/2.);
  if(bint>nbint) AliError("Wrong bin number!");

  Int_t bina = TMath::Abs((Int_t)(zdet/stepa));
  if(zdet>=0) bina+=(Int_t)(nbina/2.);
  if(bina>nbina) AliError("Wrong bin number!");

  Float_t devz = cal->GetMapACell(bina,bint)/10000.;
  Float_t devx = cal->GetMapTCell(bina,bint)/10000.;
  zdet+=devz;
  xdet+=devx;
  fDetTypeRec->GetITSgeom()->DetLToTrackingV2(fModule,xdet,zdet,y,z);


}
Commit	Line	Data
04366a57	1	/**************************************************************************
	2	* Copyright(c) 1998-2003, ALICE Experiment at CERN, All rights reserved. *
	3	* *
	4	* Author: The ALICE Off-line Project. *
	5	* Contributors are mentioned in the code where appropriate. *
	6	* *
	7	* Permission to use, copy, modify and distribute this software and its *
	8	* documentation strictly for non-commercial purposes is hereby granted *
	9	* without fee, provided that the above copyright notice appears in all *
	10	* copies and that both the copyright notice and this permission notice *
	11	* appear in the supporting documentation. The authors make no claims *
	12	* about the suitability of this software for any purpose. It is *
	13	* provided "as is" without express or implied warranty. *
	14	**************************************************************************/
	15	////////////////////////////////////////////////////////////////////////////
	16	// Implementation of the ITS clusterer V2 class //
	17	// //
	18	// Origin: Iouri Belikov, CERN, Jouri.Belikov@cern.ch //
	19	// //
	20	///////////////////////////////////////////////////////////////////////////
	21
	22
04366a57	23
04366a57	24	#include "AliITSClusterFinderV2SDD.h"
00a7cc50	25	#include "AliITSRecPoint.h"
7d62fb64	26	#include "AliITSDetTypeRec.h"
04366a57	27	#include "AliRawReader.h"
04366a57	28	#include "AliITSRawStreamSDD.h"
5bfe44ce	29	#include "AliITSCalibrationSDD.h"
	30	#include "AliITSDetTypeRec.h"
	31	#include "AliITSsegmentationSDD.h"
04366a57	32	#include <TClonesArray.h>
04366a57	33	#include "AliITSdigitSDD.h"
	34
	35	ClassImp(AliITSClusterFinderV2SDD)
	36
	37	extern AliRun *gAlice;
	38
8ba39da9	39	AliITSClusterFinderV2SDD::AliITSClusterFinderV2SDD(AliITSDetTypeRec* dettyp):AliITSClusterFinderV2(dettyp){
04366a57	40
	41	//Default constructor
	42
	43	fNySDD=256; fNzSDD=256;
	44	fYpitchSDD=0.01825;
	45	fZpitchSDD=0.02940;
	46	fHwSDD=3.5085; fHlSDD=3.7632;
	47	fYoffSDD=0.0425;
	48
	49
	50
	51	}
	52
	53
	54	void AliITSClusterFinderV2SDD::FindRawClusters(Int_t mod){
	55
	56	//Find clusters V2
	57	SetModule(mod);
	58	FindClustersSDD(fDigits);
	59
	60	}
	61
	62	void AliITSClusterFinderV2SDD::FindClustersSDD(TClonesArray *digits) {
	63	//------------------------------------------------------------
	64	// Actual SDD cluster finder
	65	//------------------------------------------------------------
	66	Int_t kNzBins = fNzSDD + 2;
	67	const Int_t kMAXBIN=kNzBins*(fNySDD+2);
	68
	69	AliBin *bins[2];
	70	bins[0]=new AliBin[kMAXBIN];
	71	bins[1]=new AliBin[kMAXBIN];
	72
	73	AliITSdigitSDD *d=0;
	74	Int_t i, ndigits=digits->GetEntriesFast();
	75	for (i=0; i<ndigits; i++) {
	76	d=(AliITSdigitSDD*)digits->UncheckedAt(i);
	77	Int_t y=d->GetCoord2()+1; //y
	78	Int_t z=d->GetCoord1()+1; //z
	79	Int_t q=d->GetSignal();
	80	if (q<3) continue;
	81
	82	if (z <= fNzSDD) {
	83	bins[0][y*kNzBins+z].SetQ(q);
	84	bins[0][y*kNzBins+z].SetMask(1);
	85	bins[0][y*kNzBins+z].SetIndex(i);
	86	} else {
	87	z-=fNzSDD;
	88	bins[1][y*kNzBins+z].SetQ(q);
	89	bins[1][y*kNzBins+z].SetMask(1);
	90	bins[1][y*kNzBins+z].SetIndex(i);
	91	}
	92	}
	93
	94	FindClustersSDD(bins, kMAXBIN, kNzBins, digits);
	95
	96	delete[] bins[0];
	97	delete[] bins[1];
	98
	99	}
	100
	101	void AliITSClusterFinderV2SDD::
	102	FindClustersSDD(AliBin* bins[2], Int_t nMaxBin, Int_t nzBins,
	103	TClonesArray digits, TClonesArray clusters) {
104	//------------------------------------------------------------
105	// Actual SDD cluster finder
106	//------------------------------------------------------------
107	Int_t ncl=0;
108	TClonesArray &cl=*clusters;
109	for (Int_t s=0; s<2; s++)
110	for (Int_t i=0; i<nMaxBin; i++) {
111	if (bins[s][i].IsUsed()) continue;
112	Int_t idx[32]; UInt_t msk[32]; Int_t npeaks=0;
113	FindPeaks(i, nzBins, bins[s], idx, msk, npeaks);
114
115	if (npeaks>30) continue;
116	if (npeaks==0) continue;
117
118	Int_t k,l;
119	for (k=0; k<npeaks-1; k++){//mark adjacent peaks
120	if (idx[k] < 0) continue; //this peak is already removed
121	for (l=k+1; l<npeaks; l++) {
122	if (idx[l] < 0) continue; //this peak is already removed
123	Int_t ki=idx[k]/nzBins, kj=idx[k] - ki*nzBins;
124	Int_t li=idx[l]/nzBins, lj=idx[l] - li*nzBins;
125	Int_t di=TMath::Abs(ki - li);
126	Int_t dj=TMath::Abs(kj - lj);
127	if (di>1 \|\| dj>1) continue;
128	if (bins[s][idx[k]].GetQ() > bins[s][idx[l]].GetQ()) {
129	msk[l]=msk[k];
130	idx[l]*=-1;
131	} else {
132	msk[k]=msk[l];
133	idx[k]*=-1;
134	break;
135	}
136	}
137	}
138
139	for (k=0; k<npeaks; k++) {
140	MarkPeak(TMath::Abs(idx[k]), nzBins, bins[s], msk[k]);
141	}
142
143	for (k=0; k<npeaks; k++) {
144	if (idx[k] < 0) continue; //removed peak
00a7cc50	145	AliITSRecPoint c(fDetTypeRec->GetITSgeom());
04366a57	146	MakeCluster(idx[k], nzBins, bins[s], msk[k], c);
	147	//mi change
	148	Int_t milab[10];
	149	for (Int_t ilab=0;ilab<10;ilab++){
	150	milab[ilab]=-2;
	151	}
	152	Int_t maxi=0,mini=0,maxj=0,minj=0;
	153	//AliBin *bmax=&bins[s][idx[k]];
	154	//Float_t max = TMath::Max(TMath::Abs(bmax->GetQ())/5.,3.);
	155	Float_t max=3;
	156	for (Int_t di=-2; di<=2;di++)
	157	for (Int_t dj=-3;dj<=3;dj++){
	158	Int_t index = idx[k]+di+dj*nzBins;
	159	if (index<0) continue;
	160	if (index>=nMaxBin) continue;
	161	AliBin *b=&bins[s][index];
	162	if (TMath::Abs(b->GetQ())>max){
	163	if (di>maxi) maxi=di;
	164	if (di<mini) mini=di;
	165	if (dj>maxj) maxj=dj;
	166	if (dj<minj) minj=dj;
	167	//
	168	if(digits) {
	169	if (TMath::Abs(di)<2&&TMath::Abs(dj)<2){
	170	AliITSdigitSDD* d=(AliITSdigitSDD*)digits->UncheckedAt(b->GetIndex());
	171	for (Int_t itrack=0;itrack<10;itrack++){
	172	Int_t track = (d->GetTracks())[itrack];
	173	if (track>=0) {
	174	AddLabel(milab, track);
	175	}
	176	}
	177	}
	178	}
	179	}
	180	}
	181
	182	/*
	183	Float_t s2 = c.GetSigmaY2()/c.GetQ() - c.GetY()*c.GetY();
	184	Float_t w=par->GetPadPitchWidth(sec);
	185	c.SetSigmaY2(s2);
	186	if (s2 != 0.) {
	187	c.SetSigmaY2(c.GetSigmaY2()*0.108);
	188	if (sec<par->GetNInnerSector()) c.SetSigmaY2(c.GetSigmaY2()*2.07);
	189	}
	190	s2 = c.GetSigmaZ2()/c.GetQ() - c.GetZ()*c.GetZ();
	191	w=par->GetZWidth();
	192	c.SetSigmaZ2(s2);
	193
	194	if (s2 != 0.) {
	195	c.SetSigmaZ2(c.GetSigmaZ2()*0.169);
	196	if (sec<par->GetNInnerSector()) c.SetSigmaZ2(c.GetSigmaZ2()*1.77);
	197	}
	198	*/
	199
	200	c.SetSigmaY2(0.0030*0.0030);
	201	c.SetSigmaZ2(0.0020*0.0020);
	202	c.SetDetectorIndex(fNdet[fModule]);
	203
	204	Float_t y=c.GetY(),z=c.GetZ(), q=c.GetQ();
	205	y/=q; z/=q;
	206	//
	207	//Float_t s2 = c.GetSigmaY2()/c.GetQ() - y*y;
	208	// c.SetSigmaY2(s2);
	209	//s2 = c.GetSigmaZ2()/c.GetQ() - z*z;
210	//c.SetSigmaZ2(s2);
211	//
212	y=(y-0.5)*fYpitchSDD;
213	y-=fHwSDD;
214	y-=fYoffSDD; //delay ?
215	if (s) y=-y;
216
217	z=(z-0.5)*fZpitchSDD;
218	z-=fHlSDD;
219
220	y=-(-y+fYshift[fModule]);
221	z= -z+fZshift[fModule];
00a7cc50	222	// c.SetY(y);
00a7cc50	223	// c.SetZ(z);
5bfe44ce	224	CorrectPosition(z,y);
00a7cc50	225	c.SetYZ(fModule,y,z);
04366a57	226	c.SetNy(maxj-minj+1);
	227	c.SetNz(maxi-mini+1);
	228	c.SetType(npeaks);
	229	c.SetQ(q/12.7); //to be consistent with the SSD charges
	230
	231	if (c.GetQ() < 20.) continue; //noise cluster
	232
	233	if (digits) {
	234	// AliBin *b=&bins[s][idx[k]];
	235	// AliITSdigitSDD* d=(AliITSdigitSDD*)digits->UncheckedAt(b->GetIndex());
	236	{
	237	//Int_t lab[3];
	238	//lab[0]=(d->GetTracks())[0];
	239	//lab[1]=(d->GetTracks())[1];
	240	//lab[2]=(d->GetTracks())[2];
	241	//CheckLabels(lab);
	242	CheckLabels2(milab);
	243	c.SetLabel(milab[0],0);
	244	c.SetLabel(milab[1],1);
	245	c.SetLabel(milab[2],2);
	246	c.SetLayer(fNlayer[fModule]);
	247	}
	248	}
00a7cc50	249	if(clusters) new (cl[ncl]) AliITSRecPoint(c);
04366a57	250	else {
00a7cc50	251	fDetTypeRec->AddRecPoint(c);
04366a57	252	}
	253	ncl++;
	254	}
	255	}
	256	}
	257
	258
	259
	260	void AliITSClusterFinderV2SDD::RawdataToClusters(AliRawReader* rawReader,TClonesArray** clusters){
	261	//------------------------------------------------------------
	262	// This function creates ITS clusters from raw data
	263	//------------------------------------------------------------
	264	rawReader->Reset();
	265	AliITSRawStreamSDD inputSDD(rawReader);
	266	FindClustersSDD(&inputSDD,clusters);
	267
	268	}
	269
	270	void AliITSClusterFinderV2SDD::FindClustersSDD(AliITSRawStream* input,
	271	TClonesArray** clusters)
	272	{
	273	//------------------------------------------------------------
	274	// Actual SDD cluster finder for raw data
	275	//------------------------------------------------------------
	276	Int_t nClustersSDD = 0;
	277	Int_t kNzBins = fNzSDD + 2;
	278	Int_t kMaxBin = kNzBins * (fNySDD+2);
d7d9347b	279	AliBin *binsSDDInit = new AliBin[kMaxBin];
	280	AliBin *binsSDD1 = new AliBin[kMaxBin];
	281	AliBin *binsSDD2 = new AliBin[kMaxBin];
04366a57	282	AliBin* bins[2] = {NULL, NULL};
	283
	284	// read raw data input stream
	285	while (kTRUE) {
	286	Bool_t next = input->Next();
	287	if (!next \|\| input->IsNewModule()) {
	288	Int_t iModule = input->GetPrevModuleID();
	289
	290	// when all data from a module was read, search for clusters
	291	if (bins[0]) {
00a7cc50	292	clusters[iModule] = new TClonesArray("AliITSRecPoint");
04366a57	293	fModule = iModule;
	294	FindClustersSDD(bins, kMaxBin, kNzBins, NULL, clusters[iModule]);
	295	Int_t nClusters = clusters[iModule]->GetEntriesFast();
	296	nClustersSDD += nClusters;
d7d9347b	297	bins[0] = bins[1] = NULL;
d7d9347b	298
04366a57	299	}
	300
	301	if (!next) break;
d7d9347b	302	bins[0]=binsSDD1;
	303	bins[1]=binsSDD2;
	304	memcpy(binsSDD1,binsSDDInit,sizeof(AliBin)*kMaxBin);
	305	memcpy(binsSDD2,binsSDDInit,sizeof(AliBin)*kMaxBin);
	306
04366a57	307	}
	308
	309	// fill the current digit into the bins array
	310	if(input->GetSignal()>=3) {
	311	Int_t iz = input->GetCoord1()+1;
	312	Int_t side = ((iz <= fNzSDD) ? 0 : 1);
	313	iz -= side*fNzSDD;
	314	Int_t index = (input->GetCoord2()+1) * kNzBins + iz;
	315	bins[side][index].SetQ(input->GetSignal());
	316	bins[side][index].SetMask(1);
	317	bins[side][index].SetIndex(index);
	318	}
	319	}
d7d9347b	320	delete[] binsSDD1;
	321	delete[] binsSDD2;
	322	delete[] binsSDDInit;
04366a57	323
	324	Info("FindClustersSDD", "found clusters in ITS SDD: %d", nClustersSDD);
	325
	326	}
	327
	328
5bfe44ce	329	//_________________________________________________________________________
	330	void AliITSClusterFinderV2SDD::CorrectPosition(Float_t &z, Float_t&y){
	331
	332	//correction of coordinates using the maps stored in the DB
	333
	334	AliITSCalibrationSDD* cal = (AliITSCalibrationSDD*)GetResp(fModule);
	335	static const Int_t nbint = cal->GetMapTimeNBin();
	336	static const Int_t nbina = cal->Chips()*cal->Channels();
	337	Float_t stepa = (GetSeg()->Dpz(0))/10000.; //anode pitch in cm
	338	Float_t stept = (GetSeg()->Dx()/cal->GetMapTimeNBin()/2.)/10.;
	339	Float_t xdet,zdet;
	340	fDetTypeRec->GetITSgeom()->TrackingV2ToDetL(fModule,y,z,xdet,zdet);
	341
	342	Int_t bint = TMath::Abs((Int_t)(xdet/stept));
	343	if(xdet>=0) bint+=(Int_t)(nbint/2.);
	344	if(bint>nbint) AliError("Wrong bin number!");
	345
	346	Int_t bina = TMath::Abs((Int_t)(zdet/stepa));
	347	if(zdet>=0) bina+=(Int_t)(nbina/2.);
	348	if(bina>nbina) AliError("Wrong bin number!");
	349
	350	Float_t devz = cal->GetMapACell(bina,bint)/10000.;
	351	Float_t devx = cal->GetMapTCell(bina,bint)/10000.;
	352	zdet+=devz;
	353	xdet+=devx;
	354	fDetTypeRec->GetITSgeom()->DetLToTrackingV2(fModule,xdet,zdet,y,z);
	355
	356
	357	}