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1a6db1e0 | 1 | class AliAnalysisGrid;\r |
2 | \r | |
32bb35a1 | 3 | void RunAnalysisAODVertexingHF()\r |
4 | {\r | |
5 | //\r | |
6 | // Test macro for AliAnalysisTaskSE's for heavy-flavour candidates\r | |
7 | // It has the structure of a Analysis Train:\r | |
8 | // - in this macro, change things related to running mode\r | |
9 | // and input preparation \r | |
10 | // - add your task using a AddTaskXXX macro \r | |
11 | //\r | |
12 | // A.Dainese, andrea.dainese@lnl.infn.it\r | |
13 | // "grid" mode added by R.Bala, bala@to.infn.it\r | |
14 | //\r | |
15 | \r | |
1a6db1e0 | 16 | //\r |
75ff3310 | 17 | TString analysisMode = "grid"; // "local", "grid", or "proof" (not yet)\r |
1a6db1e0 | 18 | TString inputMode = "list"; // "list", "xml", or "dataset" (not yet)\r |
19 | Long64_t nentries=1234567890,firstentry=0;\r | |
aabcfd8f | 20 | Bool_t useParFiles=kFALSE;\r |
75ff3310 | 21 | Bool_t useAlienPlugin=kTRUE;\r |
22 | TString pluginmode="test";\r | |
1a6db1e0 | 23 | TString loadMacroPath="$ALICE_ROOT/PWG3/vertexingHF/";\r |
24 | //\r | |
32bb35a1 | 25 | \r |
1a6db1e0 | 26 | if(analysisMode=="grid") {\r |
27 | // Connect to AliEn\r | |
28 | TGrid::Connect("alien://");\r | |
29 | } else if(analysisMode=="proof") {\r | |
30 | // Connect to the PROOF cluster\r | |
31 | printf("PROOF mode not yet functional..\n");\r | |
32 | return;\r | |
33 | TProof::Open("alicecaf");\r | |
34 | //TProof::Reset("alicecaf");\r | |
35 | }\r | |
32bb35a1 | 36 | \r |
32bb35a1 | 37 | \r |
1a6db1e0 | 38 | // AliRoot libraries\r |
39 | if(analysisMode=="local" || analysisMode=="grid") {\r | |
40 | TString loadLibraries="LoadLibraries.C"; loadLibraries.Prepend(loadMacroPath.Data());\r | |
41 | gROOT->LoadMacro(loadLibraries.Data());\r | |
42 | LoadLibraries(useParFiles);\r | |
43 | } else if (analysisMode=="proof") {\r | |
44 | gSystem->Load("libTree.so");\r | |
45 | gSystem->Load("libGeom.so");\r | |
46 | gSystem->Load("libPhysics.so");\r | |
47 | gSystem->Load("libVMC.so"); \r | |
48 | // Enable the needed packages\r | |
49 | //gProof->ClearPackages();\r | |
50 | if(!useParFiles) {\r | |
51 | gProof->UploadPackage("AF-v4-16");\r | |
52 | gProof->EnablePackage("AF-v4-16");\r | |
53 | } else {\r | |
54 | TString parDir="/afs/cern.ch/user/d/dainesea/code/";\r | |
55 | TString parFile;\r | |
56 | // --- Enable the STEERBase Package\r | |
57 | parFile="STEERBase.par"; parFile.Prepend(parDir.Data());\r | |
58 | gProof->UploadPackage(parFile.Data());\r | |
59 | gProof->EnablePackage("STEERBase");\r | |
60 | // --- Enable the ESD Package\r | |
61 | parFile="ESD.par"; parFile.Prepend(parDir.Data());\r | |
62 | gProof->UploadPackage(parFile.Data());\r | |
63 | gProof->EnablePackage("ESD");\r | |
64 | // --- Enable the AOD Package\r | |
65 | parFile="AOD.par"; parFile.Prepend(parDir.Data());\r | |
66 | gProof->UploadPackage(parFile.Data());\r | |
67 | gProof->EnablePackage("AOD");\r | |
68 | // --- Enable the ANALYSIS Package\r | |
69 | parFile="ANALYSIS.par"; parFile.Prepend(parDir.Data());\r | |
70 | gProof->UploadPackage(parFile.Data());\r | |
71 | gProof->EnablePackage("ANALYSIS");\r | |
72 | // --- Enable the ANALYSISalice Package\r | |
73 | parFile="ANALYSISalice.par"; parFile.Prepend(parDir.Data());\r | |
74 | gProof->UploadPackage(parFile.Data());\r | |
75 | gProof->EnablePackage("ANALYSISalice");\r | |
76 | // --- Enable the CORRFW Package\r | |
77 | parFile="CORRFW.par"; parFile.Prepend(parDir.Data());\r | |
78 | gProof->UploadPackage(parFile.Data());\r | |
79 | gProof->EnablePackage("CORRFW");\r | |
b093f071 | 80 | // --- Enable the PWG3base Package\r |
81 | parFile="PWG3base.par"; parFile.Prepend(parDir.Data());\r | |
82 | gProof->UploadPackage(parFile.Data());\r | |
83 | gProof->EnablePackage("PWG3base");\r | |
1a6db1e0 | 84 | // --- Enable the PWG3vertexingHF Package\r |
85 | parFile="PWG3vertexingHF.par"; parFile.Prepend(parDir.Data());\r | |
86 | gProof->UploadPackage(parFile.Data());\r | |
87 | gProof->EnablePackage("PWG3vertexingHF");\r | |
b093f071 | 88 | // --- Enable the JETAN Package\r |
89 | parFile="JETAN.par"; parFile.Prepend(parDir.Data());\r | |
90 | gProof->UploadPackage(parFile.Data());\r | |
91 | gProof->EnablePackage("JETAN");\r | |
92 | // --- Enable the PWG3muon Package\r | |
93 | parFile="PWG3muon.par"; parFile.Prepend(parDir.Data());\r | |
94 | gProof->UploadPackage(parFile.Data());\r | |
95 | gProof->EnablePackage("PWG3muon");\r | |
96 | // --- Enable the PWG4PartCorrBase Package\r | |
97 | parFile="PWG4PartCorrBase.par"; parFile.Prepend(parDir.Data());\r | |
98 | gProof->UploadPackage(parFile.Data());\r | |
99 | gProof->EnablePackage("PWG4PartCorrBase");\r | |
100 | // --- Enable the PWG4PartCorrDep Package\r | |
101 | parFile="PWG4PartCorrDep.par"; parFile.Prepend(parDir.Data());\r | |
102 | gProof->UploadPackage(parFile.Data());\r | |
103 | gProof->EnablePackage("PWG4PartCorrDep");\r | |
1a6db1e0 | 104 | }\r |
105 | gProof->ShowEnabledPackages(); // show a list of enabled packages\r | |
106 | }\r | |
32bb35a1 | 107 | \r |
108 | \r | |
1a6db1e0 | 109 | // Create Alien plugin, if requested\r |
110 | if(useAlienPlugin) { \r | |
111 | AliAnalysisGrid *alienHandler = CreateAlienHandler(pluginmode,useParFiles); \r | |
112 | if(!alienHandler) return;\r | |
113 | }\r | |
32bb35a1 | 114 | \r |
115 | \r | |
116 | //-------------------------------------------------------------------\r | |
117 | // Prepare input chain\r | |
118 | TChain *chainAOD = 0;\r | |
1a6db1e0 | 119 | TString dataset; // for proof\r |
120 | \r | |
121 | if(!useAlienPlugin) {\r | |
aabcfd8f | 122 | TString makeAODInputChain="MakeAODInputChain.C"; makeAODInputChain.Prepend(loadMacroPath.Data());\r |
1a6db1e0 | 123 | gROOT->LoadMacro(makeAODInputChain.Data());\r |
124 | if(inputMode=="list") {\r | |
125 | // Local files\r | |
126 | chainAOD = MakeAODInputChain();// with this it reads ./AliAOD.root and ./AliAOD.VertexingHF.root\r | |
aabcfd8f | 127 | //chainAOD = MakeAODInputChain("alien:///alice/cern.ch/user/r/rbala/newtrain/out_lhc08x/180100/",1,1);\r |
1a6db1e0 | 128 | } else if(inputMode=="xml") {\r |
129 | // xml\r | |
130 | chainAOD = MakeAODInputChain("collection_aod.xml","collection_aodHF.xml");\r | |
131 | } else if(inputMode=="dataset") {\r | |
132 | // CAF dataset\r | |
133 | //gProof->ShowDataSet();\r | |
134 | dataset="/ITS/dainesea/AODVertexingHF_LHC08x_180100_small";\r | |
135 | chainAOD = MakeAODInputChainCAF(dataset.Data());\r | |
136 | }\r | |
32bb35a1 | 137 | }\r |
138 | \r | |
139 | // Create the analysis manager\r | |
140 | AliAnalysisManager *mgr = new AliAnalysisManager("My Manager","My Manager");\r | |
141 | mgr->SetDebugLevel(10);\r | |
1a6db1e0 | 142 | // Connect plug-in to the analysis manager\r |
143 | if(useAlienPlugin) mgr->SetGridHandler(alienHandler);\r | |
144 | \r | |
32bb35a1 | 145 | \r |
146 | // Input\r | |
147 | AliAODInputHandler *inputHandler = new AliAODInputHandler();\r | |
148 | mgr->SetInputEventHandler(inputHandler);\r | |
149 | //-------------------------------------------------------------------\r | |
150 | \r | |
151 | \r | |
152 | //-------------------------------------------------------------------\r | |
1a6db1e0 | 153 | // Analysis tasks (wagons of the train) \r |
32bb35a1 | 154 | //\r |
1a6db1e0 | 155 | TString taskName;\r |
156 | \r | |
157 | taskName="AddTaskCompareHF.C"; taskName.Prepend(loadMacroPath.Data());\r | |
158 | gROOT->LoadMacro(taskName.Data());\r | |
32bb35a1 | 159 | AliAnalysisTaskSECompareHF *cmpTask = AddTaskCompareHF();\r |
a9f684f8 | 160 | \r |
d486095a | 161 | taskName="AddTaskDplus.C"; taskName.Prepend(loadMacroPath.Data());\r |
162 | gROOT->LoadMacro(taskName.Data());\r | |
163 | AliAnalysisTaskSEDplus *dplusTask = AddTaskDplus();\r | |
164 | \r | |
1a6db1e0 | 165 | //taskName="AddTaskSelectHF.C"; taskName.Prepend(loadMacroPath.Data());\r |
166 | //gROOT->LoadMacro(taskName.Data());\r | |
167 | //AliAnalysisTaskSESelectHF *seleTask = AddTaskSelectHF();\r | |
a9f684f8 | 168 | \r |
17e8df02 | 169 | taskName="AddTaskBkgLikeSignD0.C"; taskName.Prepend(loadMacroPath.Data());\r |
170 | gROOT->LoadMacro(taskName.Data());\r | |
171 | AliAnalysisTaskSEBkgLikeSignD0 *lsD0Task = AddTaskBkgLikeSignD0();\r | |
172 | \r | |
8f6dd855 | 173 | taskName="AddTaskBkgLikeSignJPSI.C"; taskName.Prepend(loadMacroPath.Data());\r |
b093f071 | 174 | gROOT->LoadMacro(taskName.Data());\r |
17e8df02 | 175 | AliAnalysisTaskSEBkgLikeSignJPSI *lsJPSITask = AddTaskBkgLikeSignJPSI();\r |
a9f684f8 | 176 | \r |
d234e959 | 177 | taskName="AddTaskBtoJPSItoEle.C"; taskName.Prepend(loadMacroPath.Data());\r |
178 | gROOT->LoadMacro(taskName.Data());\r | |
179 | AliAnalysisTaskSEBtoJPSItoEle *jpsiTask = AddTaskBtoJPSItoEle();\r | |
a9f684f8 | 180 | \r |
1a6db1e0 | 181 | //taskName="AddTaskCF.C"; taskName.Prepend(loadMacroPath.Data());\r |
182 | //gROOT->LoadMacro(taskName.Data());\r | |
a9f684f8 | 183 | //AliCFHeavyFlavourTask *cfTask = AddTaskCF();\r |
184 | \r | |
1a6db1e0 | 185 | //taskName="AddTaskCFMultiVar.C"; taskName.Prepend(loadMacroPath.Data());\r |
186 | //gROOT->LoadMacro(taskName.Data());\r | |
32bb35a1 | 187 | //AliCFHeavyFlavourTaskMultiVar *cfmvTask = AddTaskCFMultiVar();\r |
188 | \r | |
75ff3310 | 189 | taskName="AddTaskCFMultiVarMultiStep.C"; taskName.Prepend(loadMacroPath.Data());\r |
b093f071 | 190 | gROOT->LoadMacro(taskName.Data());\r |
09d822de | 191 | AliCFHeavyFlavourTaskMultiVarMultiStep *cfmvmsTask = AddTaskCFMultiVarMultiStep();\r |
a9f684f8 | 192 | \r |
d234e959 | 193 | taskName="AddTaskCharmFraction.C"; taskName.Prepend(loadMacroPath.Data());\r |
194 | gROOT->LoadMacro(taskName.Data());\r | |
195 | // The task is added several times with different settings:\r | |
196 | AliAnalysisTaskCharmFraction *cFractTaskSignal = AddTaskCharmFraction("d0D0_Signal.root");\r | |
197 | AliAnalysisTaskCharmFraction *cFractTaskNoMCSel = AddTaskCharmFraction("d0D0NoMCSel.root",kFALSE,kTRUE,kFALSE);\r | |
198 | AliAnalysisTaskCharmFraction *cFractTaskNoMCSel = AddTaskCharmFraction("d0D0NoMCSel_SideBand.root",kTRUE,kTRUE,kFALSE);\r | |
199 | AliAnalysisTaskCharmFraction *cFractTaskPureBack = AddTaskCharmFraction("d0D0_PureBack.root",kFALSE,kTRUE,kTRUE,kTRUE,kFALSE,kTRUE,kTRUE,kTRUE,kTRUE);\r | |
200 | \r | |
32bb35a1 | 201 | \r |
202 | //-------------------------------------------------------------------\r | |
203 | \r | |
204 | //\r | |
205 | // Run the analysis\r | |
206 | // \r | |
1a6db1e0 | 207 | if(chainAOD) printf("CHAIN HAS %d ENTRIES\n",(Int_t)chainAOD->GetEntries());\r |
208 | \r | |
209 | if(!mgr->InitAnalysis()) return;\r | |
210 | mgr->PrintStatus();\r | |
211 | if(analysisMode=="grid" && !useAlienPlugin) analysisMode="local";\r | |
212 | mgr->StartAnalysis(analysisMode.Data(),chainAOD,nentries,firstentry);\r | |
32bb35a1 | 213 | \r |
214 | return;\r | |
215 | }\r | |
1a6db1e0 | 216 | //_____________________________________________________________________________\r |
217 | //\r | |
218 | AliAnalysisGrid* CreateAlienHandler(TString pluginmode="test",Bool_t useParFiles=kFALSE)\r | |
219 | {\r | |
220 | // Check if user has a valid token, otherwise make one. This has limitations.\r | |
221 | // One can always follow the standard procedure of calling alien-token-init then\r | |
222 | // source /tmp/gclient_env_$UID in the current shell.\r | |
223 | if (!AliAnalysisGrid::CreateToken()) return NULL;\r | |
224 | AliAnalysisAlien *plugin = new AliAnalysisAlien();\r | |
225 | // Set the run mode (can be "full", "test", "offline", "submit" or "terminate")\r | |
226 | plugin->SetRunMode(pluginmode.Data());\r | |
227 | plugin->SetUser("dainesea");\r | |
228 | plugin->SetNtestFiles(1);\r | |
229 | // Set versions of used packages\r | |
230 | plugin->SetAPIVersion("V2.4");\r | |
231 | plugin->SetROOTVersion("v5-23-02");\r | |
232 | plugin->SetAliROOTVersion("v4-17-00");\r | |
233 | // Declare input data to be processed.\r | |
234 | // Method 1: Create automatically XML collections using alien 'find' command.\r | |
235 | // Define production directory LFN\r | |
75ff3310 | 236 | //plugin->SetGridDataDir("/alice/cern.ch/user/r/rbala/newtrain/out_lhc08x/");\r |
237 | plugin->SetGridDataDir("/alice/cern.ch/user/m/mgheata/analysisESD/output_train_default_28May2009_09h33/");\r | |
1a6db1e0 | 238 | // Set data search pattern\r |
239 | plugin->SetDataPattern("AliAOD.root");\r | |
240 | plugin->SetFriendChainName("AliAOD.VertexingHF.root");\r | |
241 | // ...then add run numbers to be considered\r | |
d234e959 | 242 | plugin->AddRunNumber(529007);\r |
243 | // or\r | |
244 | //plugin->SetRunRange(529000,529007);\r | |
1a6db1e0 | 245 | // Method 2: Declare existing data files (raw collections, xml collections, root file)\r |
246 | // If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())\r | |
247 | // XML collections added via this method can be combined with the first method if\r | |
248 | // the content is compatible (using or not tags)\r | |
249 | //plugin->AddDataFile("/alice/cern.ch/user/r/rbala/newtrain/collection/collection_aod_lhc08w.xml");\r | |
250 | // plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");\r | |
251 | // Define alien work directory where all files will be copied. Relative to alien $HOME.\r | |
252 | plugin->SetGridWorkingDir("work");\r | |
253 | // Declare alien output directory. Relative to working directory.\r | |
254 | plugin->SetGridOutputDir("output"); // In this case will be $HOME/work/output\r | |
255 | // Declare the analysis source files names separated by blancs. To be compiled runtime\r | |
256 | // using ACLiC on the worker nodes.\r | |
257 | //plugin->SetAnalysisSource("$ALICE_ROOT/PWG3/vertexingHF/AliAnalysisTaskSECompareHF.cxx");\r | |
258 | // Declare all libraries (other than the default ones for the framework. These will be\r | |
259 | // loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.\r | |
d234e959 | 260 | plugin->SetAdditionalLibs("libPWG3vertexingHF.so libPWG3base.so libPWG3muon.so libPWG4PartCorrBase.so libPWG4PartCorrDep.so MakeAODInputChain.C");\r |
1a6db1e0 | 261 | // use par files\r |
262 | if(useParFiles) {\r | |
263 | plugin->EnablePackage("STEERBase.par");\r | |
264 | plugin->EnablePackage("ESD.par");\r | |
265 | plugin->EnablePackage("AOD.par");\r | |
266 | plugin->EnablePackage("ANALYSIS.par");\r | |
267 | plugin->EnablePackage("ANALYSISalice.par");\r | |
268 | plugin->EnablePackage("CORRFW.par");\r | |
75ff3310 | 269 | plugin->EnablePackage("PWG3base.par");\r |
1a6db1e0 | 270 | plugin->EnablePackage("PWG3vertexingHF.par");\r |
75ff3310 | 271 | plugin->EnablePackage("PWG3muon.par");\r |
272 | plugin->EnablePackage("PWG4PartCorrBase.par");\r | |
273 | plugin->EnablePackage("PWG4PartCorrDep.par");\r | |
1a6db1e0 | 274 | }\r |
275 | // Declare the output file names separated by blancs.\r | |
276 | // (can be like: file.root or file.root@ALICE::Niham::File)\r | |
277 | plugin->SetOutputFiles("CmpHF.root");\r | |
278 | // Optionally define the files to be archived.\r | |
279 | // plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:*.root@ALICE::NIHAM::File");\r | |
280 | plugin->SetOutputArchive("log_archive.zip:stdout,stderr");\r | |
281 | // Optionally set a name for the generated analysis macro (default MyAnalysis.C)\r | |
282 | plugin->SetAnalysisMacro("AnalysisHF.C");\r | |
283 | // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)\r | |
284 | plugin->SetSplitMaxInputFileNumber(5);\r | |
285 | // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.\r | |
286 | //plugin->SetMaxInitFailed(5);\r | |
287 | // Optionally resubmit threshold.\r | |
288 | //plugin->SetMasterResubmitThreshold(90);\r | |
289 | // Optionally set time to live (default 30000 sec)\r | |
290 | //plugin->SetTTL(20000);\r | |
291 | // Optionally set input format (default xml-single)\r | |
292 | plugin->SetInputFormat("xml-single");\r | |
293 | // Optionally modify the name of the generated JDL (default analysis.jdl)\r | |
294 | plugin->SetJDLName("TaskHF.jdl");\r | |
295 | // Optionally modify job price (default 1)\r | |
296 | //plugin->SetPrice(1); \r | |
297 | // Optionally modify split mode (default 'se') \r | |
298 | plugin->SetSplitMode("se");\r | |
299 | // Optionally set the preferred SE \r | |
300 | plugin->SetPreferedSE("ALICE::Legnaro::SE");\r | |
301 | \r | |
302 | return plugin;\r | |
303 | }\r |