updates for running on the grid
[u/mrichter/AliRoot.git] / PWG4 / macros / AnalysisTrainPWG4.C
CommitLineData
36c36a0c 1// =============================================================================
2// ### General Steering variables
3// =============================================================================
4//== general setup variables
5TString kTrainName = "testAnalysis"; // *CHANGE ME* (no blancs or special characters)
6TString kJobTag = "PWG4 Analysis train configured"; // *CHANGE ME*
7
8
9// Usage of par files ONLY in grid mode and ONLY if the code is not available
10// in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
11// To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
12// AliRoot.
13Bool_t kUsePAR = kFALSE; // use par files for extra libs
14Bool_t kUseCPAR = kFALSE; // use par files for common libs
15Bool_t kFillAOD = kFALSE; // switch of AOD filling for on the fly analysis
16Int_t kSaveAOD = 8; // Bit switch 1 = Full AOD 2 = Jet AOD , 4 = PartCorr, 8 = JCORRAN
17
18
19//== general input and output variables
16484410 20Int_t iAODanalysis = 0; // Analysis on input AOD's
36c36a0c 21Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
22Int_t iCentralitySelection = 0; // Use the centrality
23Int_t iESDfilter = 0; // ESD to AOD filter (barrel + muon tracks)
24Int_t iPhysicsSelection = 1; // ESD to AOD filter (barrel + muon tracks)
25UInt_t iPhysicsSelectionFlag = 0; // set by pyshics selection and passed to the task, kMB, kUserDefined etc
26Bool_t useTender = kFALSE; // use tender wagon
27Bool_t kUseKinefilter = kFALSE; // use Kinematics filter
28Bool_t kUseMuonfilter = kFALSE; //
29TString kCommonOutputFileName = "PWG4_JetTasksOutput.root";
30TString kCaloQAOutputFileName = "PWG4_CaloQAOutput.root";
31
32//== general process variables
33
34// ### Other flags to steer the analysis
35//==============================================================================
36Bool_t kSkipTerminate = kTRUE; // Do not call Teminate
37Bool_t kUseDate = kFALSE; // use date in train name
38Bool_t kUseDebug = kTRUE; // activate debugging
39Int_t kErrorIgnoreLevel = -1; // takes the errror print level from .rootrc
40// From TError.h:
41// const Int_t kUnset = -1;
42// const Int_t kPrint = 0;
43// const Int_t kInfo = 1000;
44// const Int_t kWarning = 2000;
45// const Int_t kError = 3000;
46// const Int_t kBreak = 4000;
47// const Int_t kSysError = 5000;
48// const Int_t kFatal = 6000;
49Int_t kUseSysInfo = 0; // activate debugging
50Long64_t kNumberOfEvents = 1234567890; // number of events to process from the chain
16484410 51Bool_t kUseMC = kFALSE; // use MC info
52Bool_t kIsMC = kFALSE; // is MC info, if false it overwrites Use(AOD)MC
53Bool_t kUseAODMC = kFALSE; // use MC infA
36c36a0c 54Bool_t kUseESDTags = kFALSE; // use ESD tags for selection
55Bool_t kUseTR = kFALSE; // use track references
56Bool_t kUseAODTags = kFALSE; // use AOD tags
57Bool_t kSaveTrain = kFALSE; // save train configuration as:
58Bool_t kIsPbPb = kFALSE; // Pb+Pb
59
60
61// ### Analysis modules to be included. Some may not be yet fully implemented.
62//==============================================================================
16484410 63Int_t iJETAN = 2; // Jet analysis (PWG4) // 1 write standard 2 write non-standard jets, 3 wrtie both
36c36a0c 64TString kDefaultJetBranch = ""; // is currently set when filled (iJETAN or clusters)
16484410 65TString kDefaultJetBackgroundBranch = ""; // is currently set when filled (jet clsuters
36c36a0c 66Int_t iDIJETAN = 1;
67Int_t iJETANLib = 1;
68Int_t iPWG4JetTasks = 0; // all jet tasks flag for lib laoding
16484410 69Int_t iPWG4JetServices = 1; // jet spectrum analysis
70Int_t iPWG4JetSpectrum = 1; // jet spectrum analysis
36c36a0c 71Int_t iPWG4JCORRAN = 0; // JCORRAN module
16484410 72Int_t iPWG4LeadingUE = 1; // Underlying Event analysis
73Int_t iPWG4Fragmentation = 1; // Official Fragmentation
36c36a0c 74Int_t iPWG4JetChem = 0; // Jet chemistry
75Int_t iPWG4PtQAMC = 0; // Marta's QA tasks
16484410 76Int_t iPWG4PtSpectra = 1; // Marta's QA tasks
36c36a0c 77Int_t iPWG4PtQATPC = 0; // Marta's QA tasks
16484410 78Int_t iPWG4Cosmics = 0; // Marta's Cosmics Taks
79Int_t iPWG4QGSep = 0; // Sona's QG Separation task
36c36a0c 80Int_t iPWG4Minijet = 0; // Eva's Mini Jet Task cluster task
81Int_t iPWG4KMeans = 0; // Andreas' KMeans task
16484410 82Int_t iPWG4Cluster = 1; //
36c36a0c 83Int_t iEMCUtilLibs = 0; // Flag to satisfy dependence on EMC utils
84Int_t iPWG4PartCorrLibs = 0; // Gustavo's part corr analysis
85Int_t iPWG4PartCorr = 0; // Gustavo's part corr analysis
86Int_t iPWG4CaloQA = 0; // Gustavo's part corr analysis
87Int_t iPWG4JetCorr = 0; // Paul's jet corr analysis
88Int_t iPWG4Tagged = 0; // Gustavo's part corr analysis
89Int_t iPWG4omega3pi = 0; // Omega to 3 pi analysis (PWG4)
90Int_t iPWG4GammaConvLib = 0; // Gamma Conversio
16484410 91Int_t iPWG4GammaConv = 1; // Gamma Conversio
36c36a0c 92Int_t iPWG4CaloConv = 0; // Gamma Conversio
16484410 93Int_t kHighPtFilterMask = 256; // change depending on the used AOD Filter
94TString kDeltaAODJetName = ""; // AliAOD.Jets.root";
36c36a0c 95TString kDeltaAODJCORRANName = "AliAOD.JCORRAN.root";
96TString kDeltaAODPartCorrName = "AliAOD.PartCorr.root";
97
98
99//==============================================================================
100// ### PROOF Steering varibales
101//==============================================================================
102//== proof setup variables
103TString kProofCluster = "alicecaf.cern.ch";
104Bool_t kProofUseAFPAR = kFALSE; // use AF special par file
105TString kProofAFversion = "AF-v4-17";
106//== proof input and output variables
107TString kProofDataSet = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
108Bool_t kProofSaveToAlien = kFALSE; // save proof outputs in AliEn train_[trainName]_ddMonthyyyy_time.C
109TString kProofOutdir = "";
110Bool_t kProofClearPackages = kFALSE;
111Int_t kProofEvents = 10000;
112Int_t kProofOffset = 0;
113//== proof process variables
114
115
116//==============================================================================
117// ### Grid plugin Steering varibiables
118//==============================================================================
119//== grid plugin setup variables
120Bool_t kPluginUse = kTRUE; // do not change
121Bool_t kPluginUseProductionMode = kFALSE; // use the plugin in production mode
122TString kPluginRootVersion = "v5-27-06b"; // *CHANGE ME IF MORE RECENT IN GRID*
123TString kPluginAliRootVersion = "v4-21-09-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
124Bool_t kPluginMergeViaJDL = kTRUE; // merge via JDL
125Bool_t kPluginFastReadOption = kFALSE; // use xrootd tweaks
126Bool_t kPluginOverwriteMode = kTRUE; // overwrite existing collections
127Int_t kPluginOutputToRunNumber = 1; // write the output to subdirs named after run number
16484410 128TString kPluginExecutableCommand = "root -b -q";
36c36a0c 129// TString kPluginExecutableCommand = "source /Users/kleinb/setup_32bit_aliroot_trunk_clean_root_trunk.sh; alienroot -b -q ";
130
131// == grid plugin input and output variables
16484410 132TString kGridDataDir = "/alice/data/2010/LHC10e/";
133Int_t kGridMaxRunsFromList = 999999999;
134Int_t kGridOffsetRunFromList = 0; // skip the first n runs from the list
36c36a0c 135TString kGridLocalRunList = "";
136TString kGridOutdir = ""; // AliEn output directory. If blank will become output_<kTrainName>
16484410 137TString kGridDataSet = "LHC10e"; // sub working directory not to confuse different run xmls
138Int_t kGridRunRange[2] = {127724, 127730}; // Set the run range
139TString kGridRunPattern = "%09d"; // important for leading zeroes!!
140TString kGridPassPattern = "pass1";
36c36a0c 141TString kGridExtraFiles = ""; // files that will be added to the input list in the JDL...
16484410 142Int_t kGridMaxMergeFiles = 12; // Number of files merged in a chunk grid run range
36c36a0c 143TString kGridMergeExclude = "AliAOD.root"; // Files that should not be merged
144TString kGridOutputStorages = "disk=2"; // Make replicas on the storages
145// == grid process variables
16484410 146Int_t kGridRunsPerMaster = 100; // Number of runs per master job
147Int_t kGridFilesPerJob = 100; // Maximum number of files per job (gives size of AOD)
36c36a0c 148
149//==============================================================================
150// ### Local Steering variables
151//==============================================================================
152//== local setup variables
153//== local input and output variables
154TString kLocalXMLDataset = ""; // Change local xml dataset for local interactive analysis
155TString kLocalDataList = "local_deltaaod.txt"; // Change local xml dataset for local interactive analysis
156// == local process variables
157
158TString kPluginMode;
159
160
161// Temporaries.
162TString anaPars = "";
163TString anaLibs = "";
164TString anaLibsExtra = "";
165TString anaSources = "";
166// Function signatures
167class AliAnalysisAlien;
168
169//______________________________________________________________________________
170void AnalysisTrainPWG4(const char *analysis_mode="local",
171 const char *plugin_mode="",
172 const char *config_file="",Int_t iOffset = 0,Int_t iTotal = 0)
173{
174// Main analysis train macro. If a configuration file is provided, all parameters
175// are taken from there but may be altered by CheckModuleFlags.
176
177 // these flag may be needed by the config file
178 kPluginMode = plugin_mode;
179
180 if (strlen(config_file) && !LoadConfig(config_file)) return;
181 if(iTotal>0)kGridMaxRunsFromList = iTotal; // overwrites the settings from config file
182 if(iOffset)kGridOffsetRunFromList = iOffset;
183 if(iOffset)kProofOffset = iOffset;
184
185
186 TString smode(analysis_mode);
187 smode.ToUpper();
188 // Check compatibility of selected modules
189 CheckModuleFlags(smode);
190 // gROOT->ProcessLine(".trace");
191
192 printf("==================================================================\n");
193 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", kTrainName.Data(),smode.Data());
194 printf("==================================================================\n");
195 printf("= Configuring analysis train for: =\n");
196 if (iAODanalysis) printf("= AOD analysis =\n");
197 else printf("= ESD analysis =\n");
198 if (iPhysicsSelection) printf("= Physics selection =\n");
199 if(iCentralitySelection)printf("= Centrality selection =\n");
200 if (useTender) printf("= Using tender =\n");
201 if (iESDfilter) printf("= ESD filter =\n");
202 if (iJETAN) printf("= Jet analysis =\n");
203 printf("==================================================================\n");
204
205 char *printMask = ":: %20s %10d\n";
206 printf(printMask,"Fill AOD",(UInt_t)kFillAOD);
207 printf(printMask,"Save AOD", (UInt_t)kSaveAOD);
208 printf(printMask,"MC truth", (UInt_t)kUseMC);
209 printf(printMask,"KINE filter", (UInt_t)kUseKinefilter);
210 printf(printMask,"track refs", (UInt_t)kUseTR);
211 printf(printMask,"tags", (UInt_t)kUseESDTags);
212 printf(printMask,"AOD tags", (UInt_t)kUseAODTags);
213 printf(printMask,"debugging", (UInt_t)kUseDebug);
214 printf(printMask,"PAR files", (UInt_t)kUsePAR);
215 printf(printMask,"AliEn plugin", (UInt_t)kPluginUse);
216 printf(printMask,"PWG4 Fragmentation",iPWG4Fragmentation);
217 printf(printMask,"PWG4 Jet Chem",iPWG4JetChem);
218 printf(printMask,"PWG4 Jet tasks",iPWG4JetTasks);
219 printf(printMask,"PWG4 Jet Services",iPWG4JetServices);
220 printf(printMask,"PWG4 Jet Spectrum",iPWG4JetSpectrum);
221 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
222 printf(printMask,"PWG4 Leading UE",iPWG4LeadingUE);
223 printf(printMask,"PWG4 Pt QA MC",iPWG4PtQAMC);
224 printf(printMask,"PWG4 Pt Spectra",iPWG4PtSpectra);
225 printf(printMask,"PWG4 Pt QA TPC",iPWG4PtQATPC);
226 printf(printMask,"PWG4 Cosmics",iPWG4Cosmics);
227 printf(printMask,"PWG4 QGSep",iPWG4QGSep);
228 printf(printMask,"PWG4 Minijet",iPWG4Minijet);
229 printf(printMask,"PWG4 KMeans",iPWG4KMeans);
230 printf(printMask,"PWG4 Cluster",iPWG4Cluster);
231 printf(printMask,"PWG4 Part Corr",iPWG4PartCorr);
232 printf(printMask,"PWG4 Calo QA",iPWG4CaloQA);
233 printf(printMask,"PWG4 Jet Corr",iPWG4JetCorr);
234 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
235 printf(printMask,"PWG4 Tagged",iPWG4Tagged);
236 printf(printMask,"PWG4 omega to 3 pi ",iPWG4omega3pi);
237 printf(printMask,"PWG4 Gamma Conv",iPWG4GammaConv);
238 printf(printMask,"PWG4 Calo Conv",iPWG4CaloConv);
239 printf(printMask,"HighPt FilterMask",kHighPtFilterMask);
240
241 //==========================================================================
242 // Connect to back-end system
243 if (!Connect(smode)) {
244 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
245 return;
246 }
247
248 // Load common libraries and set include path
249 if (!LoadCommonLibraries(smode)) {
250 ::Error("AnalysisTrain", "Could not load common libraries");
251 return;
252 }
253
254
255
256 // Make the analysis manager and connect event handlers
257 AliAnalysisManager *mgr = new AliAnalysisManager("PWG4Train", "pwg4 mini train");
258 if (kCommonOutputFileName.Length()>0)mgr->SetCommonFileName(kCommonOutputFileName.Data());
259 if (kProofSaveToAlien) mgr->SetSpecialOutputLocation(kProofOutdir);
260 mgr->SetNSysInfo(0);
261 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
262 if (kUseSysInfo)mgr->SetNSysInfo(kUseSysInfo);
263 mgr->SetSkipTerminate(kSkipTerminate);
264
265 // Load analysis specific libraries
266 if (!LoadAnalysisLibraries(smode)) {
267 ::Error("AnalysisTrain", "Could not load analysis libraries");
268 return;
269 }
270
271 // Create input handler (input container created automatically)
272 if (iAODanalysis) {
273 // AOD input handler
274 AliAODInputHandler *aodH = new AliAODInputHandler();
275 mgr->SetInputEventHandler(aodH);
276 // if (iPWG4JetTasks) aodH->AddFriend(Form("deltas/%s",kDeltaAODJetName.Data()));
277 // if (iPWG4PartCorr) aodH->AddFriend(Form("deltas/%s"kDeltaAODJetName.Data()));
278 } else {
279 // ESD input handler
280 AliESDInputHandler *esdHandler = new AliESDInputHandler();
281 if (kUseESDTags) esdHandler->SetReadTags();
282 esdHandler->SetReadFriends(kFALSE);
283 mgr->SetInputEventHandler(esdHandler);
284 // if(iPWG4PtQATPC&& !kTrainName.Contains("pass5"))esdHandler->SetActiveBranches("ESDfriend");
285
286 }
287
288 // Monte Carlo handler
289 if (kUseMC && !iAODanalysis) {
290 AliMCEventHandler* mcHandler = new AliMCEventHandler();
291 mgr->SetMCtruthEventHandler(mcHandler);
292 mcHandler->SetReadTR(kUseTR);
293 }
294 // AOD output container, created automatically when setting an AOD handler
295 if (iAODhandler) {
296 // AOD output handler
297 AliAODHandler* aodHandler = new AliAODHandler();
298 aodHandler->SetOutputFileName("AliAOD.root");
299 aodHandler->SetFillAODforRun(kFillAOD);
300 //
301 mgr->SetOutputEventHandler(aodHandler);
302 AliAnalysisDataContainer * cout_aod = mgr->GetCommonOutputContainer();
303 cout_aod->SetSpecialOutput();
304 }
305 // Debugging if needed
306
307 if (kUseDebug){
308 mgr->SetDebugLevel(3);
309 }
310 if(kUseSysInfo>0){
311 mgr->RegisterExtraFile("syswatch.root");
312 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
313 kGridMergeExclude += "syswatch.root";
314 }
315 else{
316 AliLog::SetGlobalLogLevel(AliLog::kError);
317 }
318
319
320 //==========================================================================
321 // Create the chain. In this example it is created only from ALIEN files but
322 // can be done to work in batch or grid mode as well.
323 TChain *chain = CreateChain(smode, plugin_mode);
324
325 //==========================================================================
326 // Load the tasks configuration macros for all wagons. These files are supposed now to be
327 // in the current workdir, but in AliEn they will be in the file catalog,
328 // mapped from AliRoot and pecified in the jdl input list.
329
330 // For now connection to top input container and common AOD output container
331 // is done in this macro, but in future these containers will be connected
332 // from each task configuration macro.
333
334 //
335 // Tender and supplies. Needs to be called for every event.
336 //
337 if (useTender) {
338 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/TenderSupplies/AddTaskTender.C");
339 AliAnalysisTaskSE *tender = AddTaskTender(kTRUE);
340 // tender->SelectCollisionCandidates();
341 tender->SetDebugLevel(2);
342 }
343
344
345
346 if(iPhysicsSelection && !iAODanalysis){
347 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
36c36a0c 348 Bool_t rejectBkg = true;
349 if(kIsPbPb){
36c36a0c 350 rejectBkg = false; // for the moment...
351 }
352 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kIsMC,rejectBkg);
353 iPhysicsSelectionFlag = AliVEvent::kMB;
354 }
355
356 if(iCentralitySelection){
357
358 // has to run before AOD filter
359 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCentralitySelection.C");
360 const char* file1="$ALICE_ROOT/ANALYSIS/macros/AliCentralityBy1D_137161_v5.root";
361 const char* file2="$ALICE_ROOT/ANALYSIS/macros/AliCentralityBy1D_137366_v3.root";
362 AliCentralitySelectionTask *taskC = AddTaskCentralitySelection(file1,file2);
363 if (!taskC) ::Warning("AnalysisTrainPWG4", "AliCentralitySelectionTask cannot run for this train conditions - EXCLUDED");
364 }
365
366 if (iESDfilter && !iAODanalysis) {
367 // ESD filter task configuration.
368 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskESDFilterPWG4Train.C");
369 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilter(kUseKinefilter,kUseMuonfilter);
370 taskesdfilter->SetEnableFillAOD(kFALSE);
371
372 if(kIsMC){
373 mgr->RegisterExtraFile("pyxsec_hists.root");
374 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
375 kGridMergeExclude += "pyxsec_hists.root";
376
377 }
378 }
379
380 // AOD tags
381 if (kUseAODTags) {
382 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
383 mgr->AddTask(tagTask);
384 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
385 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
386 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
387 mgr->ConnectOutput(tagTask, 1, coutTags);
388 }
389
390 // Jet analysis
391 if (iJETAN) {
392 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJets.C");
393 AliAnalysisTaskJets *taskjets = 0;
394 if(iJETAN&1){
395 // default nothing...
396 }
397 if(iJETAN&2){
398 // Set only few jet finders backgroudn subtraction w an wo
399
36c36a0c 400 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1,0); // high p_T no abackground subtraction
401 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
402 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1,1); // high p_T abackground subtraction
403 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
36c36a0c 404 taskjets = AddTaskJets("AOD","UA1",0.2,kHighPtFilterMask,1,0); // high p_T no abackground subtraction
405 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
406 taskjets = AddTaskJets("AOD","UA1",0.2,kHighPtFilterMask,1,1); // high p_T abackground subtraction
407 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
408 }
409 if (!taskjets) ::Warning("AnalysisTrainPWG4", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
410 if(kDeltaAODJetName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJetName.Data());
411 }
412
413 if(iPWG4Cluster){
414 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCluster.C");
415 AliAnalysisTaskJetCluster *taskCl = 0;
416 Float_t fCenUp = 0;
417 Float_t fCenLo = 0;
418 if(kIsPbPb&&!kIsMC){
419 fCenLo = 0;
420 fCenUp = 80;
421 }
422 if(iPWG4Cluster&1){
423
424 if(kIsPbPb){
36c36a0c 425 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
426 taskCl->SetBackgroundCalc(kTRUE);
427 taskCl->SetCentralityCut(fCenLo,fCenUp);
428 taskCl->SetGhostEtamax(0.9);
16484410 429 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
430
431 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.2,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
36c36a0c 432 taskCl->SetBackgroundCalc(kTRUE);
433 taskCl->SetCentralityCut(fCenLo,fCenUp);
434 taskCl->SetGhostEtamax(0.9);
36c36a0c 435 }
436 else{
16484410 437 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1,kDeltaAODJetName.Data());
36c36a0c 438 taskCl->SetBackgroundCalc(kTRUE);
16484410 439 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
36c36a0c 440 }
16484410 441
36c36a0c 442 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15);
443 taskCl->SetCentralityCut(fCenLo,fCenUp);
444 if(kDeltaAODJetName.Length()==0)taskCl->SetJetTriggerPtCut(40.);//
16484410 445 taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
446 kDefaultJetBranch = taskCl->GetJetOutputBranch();
36c36a0c 447
448
16484410 449 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.2,0,1,kDeltaAODJetName.Data(),0.15);
36c36a0c 450 taskCl->SetCentralityCut(fCenLo,fCenUp);
16484410 451 taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
36c36a0c 452
453 if (!taskCl) ::Warning("AnalysisTrainPWG4", "AliAnalysisTaskCluster cannot run for this train conditions - EXCLUDED");
454 }
36c36a0c 455 }
456
457 if (iDIJETAN) {
458 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskDiJets.C");
459 AliAnalysisTaskDiJets *taskdijets = 0;
460 if(iDIJETAN&1)taskdijets = AddTaskDiJets();
461 if (!taskdijets) ::Warning("AnalysisTrainPWG4", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
462 if(iDIJETAN&2){
463 taskdijets = AddTaskDiJets("jetsAOD_CDF07");
464 taskdijets = AddTaskDiJets("jetsAOD_DA07");
465 taskdijets = AddTaskDiJets("jetsAOD_FASTJET07");
466 taskdijets = AddTaskDiJets("jetsAOD_FASTKT07");
467 taskdijets = AddTaskDiJets("jetsAOD_SISCONE07");
468 taskdijets = AddTaskDiJets("jetsAOD_UA107");
469 }
470 }
471
36c36a0c 472 if(iPWG4JetServices){
473 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetServices.C");
474 AliAnalysisTaskJetServices *taskjetServ = 0;
475 taskjetServ = AddTaskJetServices();
476 if (!taskjetServ) ::Warning("AnalysisTrainPWG4", "AliAnalysisTaskJetServices cannot run for this train conditions - EXCLUDED");
477 if(kGridRunRange[0]>0)taskjetServ->SetRunRange(kGridRunRange[0],kGridRunRange[1]);
478 else taskjetServ->SetRunRange(110000,160000);
479 taskjetServ->SetMCData(kIsMC);
480 taskjetServ->SetUsePhysicsSelection((Bool_t)iPhysicsSelection);
481 taskjetServ->SetPhysicsSelectionFlag(iPhysicsSelectionFlag); //
482 taskjetServ->SetDebugLevel(0);
483 taskjetServ->SetNonStdFile(kDeltaAODJetName.Data());
484 if(kIsPbPb){
485 taskjetServ->SetFilterAODCollisions(kTRUE);
16484410 486 taskjetServ->SetZVertexCut(8.);
36c36a0c 487 }
488 if(iAODanalysis){
489 taskjetServ->SetAODInput(kTRUE);
490 }
491 }
492
493 if(iPWG4JetSpectrum){
494 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetSpectrum2.C");
495 AliAnalysisTaskJetSpectrum2 *taskjetSpectrum = 0;
16484410 496 if(iPWG4JetSpectrum&1){
497 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),"",kDefaultJetBackgroundBranch.Data(),kHighPtFilterMask,AliVEvent::kMB,0,kTRUE,1,0);
498 if(kIsPbPb){
499 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),"",kDefaultJetBackgroundBranch.Data(),kHighPtFilterMask,AliVEvent::kMB,0,kTRUE,1,1);
500 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),"",kDefaultJetBackgroundBranch.Data(),kHighPtFilterMask,AliVEvent::kMB,0,kTRUE,1,2);
501 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),"",kDefaultJetBackgroundBranch.Data(),kHighPtFilterMask,AliVEvent::kMB,0,kTRUE,1,3);
502 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),"",kDefaultJetBackgroundBranch.Data(),kHighPtFilterMask,AliVEvent::kMB,0,kTRUE,1,4);
503 }
504 }
36c36a0c 505 if (!taskjetSpectrum) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetSpectrum2 cannot run for this train conditions - EXCLUDED");
506
507 }
508
509
16484410 510 if(iPWG4Fragmentation){
511 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFragmentationFunction.C");
512 AliAnalysisTaskFragmentationFunction *taskFrag = 0;
513 if(kUseAODMC){
514
515 }
516 else{
517 taskFrag = AddTaskFragmentationFunction(kDefaultJetBranch.Data(),"","","",kHighPtFilterMask);
518 }
519
520 if (!taskFrag) ::Warning("AnalysisTrainPWG4", "AliAnalysisTaskFragmentationFunction cannot run for this train conditions - EXCLUDED");
521 }
522
523
524 if(iPWG4JetChem){
525 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetChem.C");
526 AliAnalysisTask *taskChem = AddTaskJetChem(kHighPtFilterMask);
527 if (!taskChem) ::Warning("AnalysisTrainPWG4", "AliAnalysisTaskJetChem cannot run for this train conditions - EXCLUDED");
528 }
529
530
531
532
36c36a0c 533 if(iPWG4JCORRAN){
534 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJCORRANTask.C");
535 AliJCORRANTask* corran = AddTaskJCORRAN(kDeltaAODJCORRANName.Data(),0);
536 if(!corran)::Warning("AnalysisTrainPWG4Jets", "AliJCORRANTask cannot run for this train conditions - EXCLUDED");
537 else{
538 if(kDeltaAODJCORRANName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJCORRANName.Data());
539 }
540 }
541
542 if(iPWG4LeadingUE){
543 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskLeadingTrackUE.C");
544 AliAnalysisTaskLeadingTrackUE *taskLeadingUE = AddTaskLeadingTrackUE(kUseMC);
545 if (!taskLeadingUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTasLeadingTrackkUE cannot run for this train conditions - EXCLUDED");
546 // taskLeadingUE->SetFilterBit(64);
547 }
548
549
550 if(iPWG4QGSep){
551 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskQGSep.C");
552 AliAnalysisTaskQGSep *taskQGSep = AddTaskQGSep(kUseMC,iAODanalysis);
553 if(!taskQGSep)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQGSep cannot run for this train conditions - EXCLUDED");
554 }
555
556
557 if(iPWG4Minijet){
558 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskMinijet.C");
559 AliAnalysisTaskMinijet *taskMini = AddTaskMinijet(-1,"esd",kUseMC,kGridDataSet);
560 // if we ha highmult trigger add another task
561 if(!taskMini)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskMinjet cannot run for this train conditions - EXCLUDED");
562 }
563
564
565 if(iPWG4PtQAMC){
566 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQAMC.C");
567 AliPWG4HighPtQAMC *taskQAMC = 0;
568 if(kUseMC){
569 if(iPWG4PtQAMC&1)taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),0);
570 if(iPWG4PtQAMC&1)taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),1);
571 }
572 if (!taskQAMC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQAMC cannot run for this train conditions - EXCLUDED");
573 }
574
575 if(iPWG4PtQATPC){
576 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQATPConly.C");
577 AliPWG4HighPtQATPConly *taskQATPC = 0;
578 if(iPWG4PtQATPC&1)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),1);
579 if(iPWG4PtQATPC&2)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),2);
580
581 if (!taskQATPC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQATPC cannot run for this train conditions - EXCLUDED");
582 }
583
584 if(iPWG4Cosmics){
585 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4CosmicCandidates.C");
586
587 AliPWG4CosmicCandidates *taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(0);
588 taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(1);
589
590 if (!taskPWG4CosmicCandidates) ::Warning("AnalysisTrainPWG4Jets", "AddTaskPWG4CosmicCandidates cannot run for this train conditions - EXCLUDED");
591 }
592
593
594 if(iPWG4PtSpectra){
595 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtSpectra.C");
596 AliPWG4HighPtSpectra *taskPtSpectra = AddTaskPWG4HighPtSpectra(kGridDataSet.Data());
597 if (!taskPtSpectra) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskPtSpectra cannot run for this train conditions - EXCLUDED");
598 }
599 if(iPWG4KMeans){
600 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskKMeans.C");
601 AliAnalysisTaskKMeans *taskKMeans = AddTaskKMeans();
602 if (!taskKMeans) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskKMenans cannot run for this train conditions - EXCLUDED");
603 }
604
605 if(iPWG4PartCorr){
606 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPartCorr.C");
607 AliAnalysisTaskParticleCorrelation *taskpartcorrPHOS = AddTaskPartCorr("AOD", "PHOS",kFALSE,kIsMC);
608 if (!taskpartcorrPHOS) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation PHOS cannot run for this train conditions - EXCLUDED");
609 AliAnalysisTaskParticleCorrelation *taskpartcorrEMCAL = AddTaskPartCorr("AOD", "EMCAL",kFALSE,kIsMC);
610 if (!taskpartcorrEMCAL) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation EMCAL cannot run for this train conditions - EXCLUDED");
611 if(kDeltaAODPartCorrName.Length()>0)mgr->RegisterExtraFile(kDeltaAODPartCorrName.Data());
612 }
613
614 if(iPWG4CaloQA){
615 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/QA/AddTaskCalorimeterQA.C");
616 AliAnalysisTaskParticleCorrelation *taskcaloQA = AddTaskCalorimeterQA("ESD",kFALSE,kIsMC,kCaloQAOutputFileName.Data());
617 if(!taskcaloQA)::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation QA cannot run - EXCLUDED");
618 // if(kCaloQAOutputFileName.Length()>0)mgr->RegisterExtraFile(kCaloQAOutputFileName.Data());
619 }
620
621 if(iPWG4JetCorr){
622 // using namespace JetCorrelHD;
623 TString cdir = gSystem->WorkingDirectory();
624 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
625 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCorrel.C");
626 AliAnalysisTaskJetCorrel *taskjetcorr = AddTaskJetCorrel();
627 gSystem->ChangeDirectory(cdir);
628 if (!taskjetcorr) ::Warning("AnalysisTrainNew", "AliAnalysisTaskJetCorrel cannot run for this train conditions - EXCLUDED");
629 }
630
631 if(iPWG4Tagged){
632 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskTaggedPhotons.C");
633 AliAnalysisTaskTaggedPhotons * taskTagged = AddTaskTaggedPhotons(kFALSE); // EMCAL
634 taskTagged = AddTaskTaggedPhotons(kTRUE); // PHOS
635 if (!taskTagged) ::Warning("AnalysisTrainNew", "AliAnalysisTaskTaggedPhotons cannot run for this train conditions - EXCLUDED");
636 }
637 if (iPWG4omega3pi) {
638 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskomega3pi.C");
639 AliAnalysisTaskOmegaPi0PiPi *taskomega3pi = AddTaskomega3pi();
640 if (!taskomega3pi) ::Warning("AnalysisTrainNew", "AliAnalysisTaskomega3pi cannot run\
641 for these train conditions - EXCLUDED");
642 }
643
644 // PWG4 gamma conversion analysis
645 if (iPWG4GammaConv) {
646 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskGammaConversion.C");
647 TString cdir = gSystem->WorkingDirectory();
648 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
649 // TString gcArguments = "-run-on-train -run-jet -run-chic -run-neutralmeson -run-cf";
650 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
651 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
652 TString gcArguments = "-run-on-train -run-jet -run-omega-meson -use-own-xyz -run-neutralmeson -no-aod";
653 // TString kGCAnalysisCutSelectionId="9003562000100310";
654 // TString kGCAnalysisCutSelectionId="9003562000100312";
655 // gcArguments.Append(Form(" -set-cut-selection %s ",kGCAnalysisCutSelectionId.Data()));
656 if(!kIsMC)gcArguments += " -mc-off";
657 AliAnalysisTaskGammaConversion * taskGammaConversion = AddTaskGammaConversion(gcArguments,mgr->GetCommonInputContainer());
658 gSystem->ChangeDirectory(cdir);
659 taskGammaConversion->SelectCollisionCandidates();
660 if (!taskGammaConversion) ::Warning("AnalysisTrainNew", "AliAnalysisTaskGammaConversion cannot run for these train conditions - EXCLUDED");
661 }
662
663 if (iPWG4CaloConv) {
664 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCaloConv.C");
665 AliAnalysisTaskCaloConv * taskCaloConv = AddTaskCaloConv();
666 if (!taskCaloConv) ::Warning("AnalysisTrainNew", "AliAnalysisTaskCaloConv cannot run for these train conditions - EXCLUDED");
667 }
668
669
670
671 //==========================================================================
672 // FOR THE REST OF THE TASKS THE MACRO AddTaskXXX() is not yet implemented/
673 // Run the analysis
674 //
675 if (kPluginUse) {
676 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
677 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
678 }
679
680 if (mgr->InitAnalysis()) {
681 mgr->PrintStatus();
682 // if (kSaveTrain || strlen(config_file)) gSystem->ChangeDirectory(kTrainName);
683 if (!strcmp(plugin_mode,"submit")&&smode=="GRID"){
684 TString alien_workdir = gGrid->GetHomeDirectory();
685 if (iAODanalysis) alien_workdir += "analysisAOD";
686 else alien_workdir += "analysisESD";
687 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
688 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
689 printf("=== AnalysisTrainPWG4Jets:: Registering jdl in the work directory alien://%s/%s, should be done by the manager! ===\n",
690 alien_workdir.Data(),gridhandler->GetGridOutputDir());
691
692 TString dest;
693 dest = Form("%s/%s/%s.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
694 if(AliAnalysisAlien::FileExists(dest.Data())){
695 // Printf("%s exist on grid removing...",dest.Data());
696 // gGrid->Rm(dest.Data());
697 }
698 TFile::Cp(Form("file:%s.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
699
700
701 TString dest;
702 dest = Form("%s/%s/%s_merge.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
703 if(AliAnalysisAlien::FileExists(dest.Data())){
704 // Printf("%s exist on grid removing...",dest.Data());
705 // gGrid->Rm(dest.Data());
706 }
707 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
708
709
710 dest = Form("%s/rootfiles/STEER/LQ1dRef_v1.root",gGrid->GetHomeDirectory());
711 if(AliAnalysisAlien::FileExists(dest.Data())){
712 Printf("%s exist on grid removing...",dest.Data());
713 gGrid->Rm(dest.Data());
714 }
715 TFile::Cp(Form("file:%s/STEER/LQ1dRef_v1.root",
716 gSystem->ExpandPathName("$ALICE_ROOT")),Form("alien://%s",dest.Data()));
717 }
718 AliLog::SetGlobalLogLevel(AliLog::kError);
719 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
720 TFile * fM = TFile::Open("manager_local.root","RECREATE");
721 mgr->Write();
722 fM->Close();
723 }
724
725 // grmpf, aliroot error handler overwrites root
726 gErrorIgnoreLevel = kErrorIgnoreLevel;
727 if(gErrorIgnoreLevel>3000) AliLog::SetGlobalLogLevel(AliLog::kFatal);
728 StartAnalysis(smode, chain);
729 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
730 for(int i = 0;i < mgr->GetTopTasks()->GetEntries();i++){
731 mgr->ProfileTask(i);
732 }
733 }
734 if (kSaveTrain && smode=="GRID") {
735 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
736 TString alien_workdir = gGrid->GetHomeDirectory();
737 if (iAODanalysis) alien_workdir += "analysisAOD";
738 else alien_workdir += "analysisESD";
739 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
740 // kGridOutdir = gridhandler->GetGridOutputDir();
741 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
742 alien_workdir.Data());
743 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data())))
744 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
745 if (strcmp(plugin_mode, "test"))
746 TFile::Cp(Form("file:%sConfig.C",kTrainName.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
747 }
748 }
749}
750
751//______________________________________________________________________________
752void StartAnalysis(const char *mode, TChain *chain) {
753// Start analysis.
754 Int_t imode = -1;
755 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
756 if (!strcmp(mode, "LOCAL")) imode = 0;
757 if (!strcmp(mode, "PROOF")) imode = 1;
758 if (!strcmp(mode, "GRID")) imode = 2;
759 switch (imode) {
760 case 0:
761 if (!chain) {
762 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
763 return;
764 }
765 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
766 return;
767 case 1:
768 if (!kProofDataSet.Length()) {
769 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "kProofDataSet is empty");
770 return;
771 }
772 mgr->StartAnalysis(mode, kProofDataSet, kProofEvents,kProofOffset);
773 return;
774 case 2:
775 if (kPluginUse) {
776 if (!mgr->GetGridHandler()) {
777 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Grid plugin not initialized");
778 return;
779 }
780 mgr->StartAnalysis("grid",chain,kNumberOfEvents);
781 } else {
782 if (!chain) {
783 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
784 return;
785 }
786 mgr->StartAnalysis(mode, chain);
787 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
788 }
789 return;
790 }
791}
792
793//______________________________________________________________________________
794void CheckModuleFlags(const char *mode) {
795// Checks selected modules and insure compatibility
796 Int_t imode = -1;
797 if (!strcmp(mode, "LOCAL")) imode = 0;
798 if (!strcmp(mode, "PROOF")) imode = 1;
799 if (!strcmp(mode, "GRID")) imode = 2;
800
801
802 if (kUseCPAR) {
803 kPluginAliRootVersion = ""; // NO aliroot if we use CPAR
804 }
805
806 if (imode==1) {
807 if (!kUsePAR) {
808 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
809 kUsePAR = kTRUE;
810 }
811 }
812 if (imode != 2) {
813 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
814 kPluginUse = kFALSE;
815 }
816
817
818 if(!kIsMC){
819 // switch off anthin related to MC
820 kUseMC = 0;
821 kUseAODMC = 0;
822 kUseTR = kFALSE;
823 }
824
825 // Decide if we have PbPb
826 if(kGridDataSet.CompareTo("LHC10h")==0||kGridDataSet.Contains("LHC10h")) {
827 Printf("Using settings for Pb+Pb");
828 kIsPbPb = true;
829 }
830
831
832
833 if (iAODanalysis) {
834 // AOD analysis
835 if (kUseMC)
836 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
837 if (kUseAODTags)
838 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
839 kUseMC = kFALSE;
840 kUseTR = kFALSE;
841 kUseAODTags = kFALSE;
842 if (iESDfilter)
843 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
844 iESDfilter = 0;
845 if (iPhysicsSelection)
846 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "Physics Selection disabled in analysis on AOD's");
847 iPhysicsSelection = 0;
848 if (!iAODhandler) {
849 if (iJETAN)
850 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
851 iJETAN = 0;
852 iDIJETAN = 0;
853 }
854 // Disable tasks that do not work yet on AOD data
855 if(iPWG4JCORRAN)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 JCORRAN disabled in analysis on AOD's");
856 iPWG4JCORRAN = 0;
857 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
858 iPWG4PtQAMC = 0;
859 if( iPWG4PtQATPC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtTPC disabled in analysis on AOD's");
860 iPWG4PtQATPC = 0;
861 if( iPWG4Cosmics)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Comics disabled in analysis on AOD's");
862 iPWG4Cosmics = 0;
863
864 if( iPWG4PtSpectra)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
865 iPWG4PtSpectra = 0;
866 if(iPWG4KMeans)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4KMeans disabled on AOD's");
867 iPWG4KMeans = 0;
868 if (iPWG4JetCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4Jetcorr disabled on AOD's");
869 iPWG4JetCorr = 0;
870 if (iPWG4PartCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
871 iPWG4PartCorr = 0;
872 if (iPWG4CaloQA)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4CaloQA disabled on AOD's");
873 iPWG4CaloQA = 0;
874 if (iPWG4Tagged)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4tagged disabled on AOD's");
875 iPWG4Tagged = 0;
876 if (iPWG4omega3pi)
877 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
878 iPWG4omega3pi = 0;
879 if (iPWG4GammaConv)::Info("AnalysisPWG4Jets.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's");
880 iPWG4GammaConv = 0;
881 iCentralitySelection = 0;
882 } else {
883 // ESD analysis
884
885 if(kIsPbPb){
886 iCentralitySelection = 1;
887 }
888
889 if (!kUseMC){
890 kUseTR = kFALSE;
891
892 if(kUseKinefilter)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Kine Filter disabled in analysis without MC");
893 kUseKinefilter = kFALSE;
894 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis without MC");
895 iPWG4PtQAMC = 0;
36c36a0c 896 }
897 if (!kUseTR) {
898 if(iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "iPWG4QATPCMC disabled if not reading track references");
899 iPWG4PtQAMC = 0;
900 }
901 if (iJETAN){
902 iESDfilter=1;
903 }
904 if (!iESDfilter){
905 kUseKinefilter = kFALSE;
906 kUseMuonfilter = kFALSE;
907 }
908 if(!iJETAN){
909 iPWG4JetSpectrum = iPWG4QGSep = iDIJETAN = 0;
910 }
911 }
912 iPWG4JetTasks = iPWG4JetServices||iPWG4JetSpectrum||iPWG4LeadingUE||iPWG4PtQAMC||iPWG4PtSpectra||iPWG4PtQATPC||iPWG4Cosmics||iPWG4QGSep||iPWG4JetChem||iPWG4Minijet||iPWG4Fragmentation;
913 iPWG4PartCorrLibs = iPWG4PartCorr||iPWG4Tagged||iPWG4CaloQA;
914 iPWG4GammaConvLib = iPWG4GammaConv||iPWG4CaloConv;
915
916
917 iEMCUtilLibs = iPWG4PartCorrLibs||iPWG4JCORRAN||iPWG4GammaConvLib;
918 iJETANLib = iPWG4JetTasks||iJETAN||iDIJETAN;
919
920 if (iESDfilter) {iAODhandler=1;}
921 if (kUseKinefilter && !kUseMC) kUseKinefilter = kFALSE;
922 if (kUseAODTags && !iAODhandler) kUseAODTags = kFALSE;
923
924
925
926}
927
928//______________________________________________________________________________
929Bool_t Connect(const char *mode) {
930// Connect <username> to the back-end system.
931 Int_t imode = -1;
932 if (!strcmp(mode, "LOCAL")) imode = 0;
933 if (!strcmp(mode, "PROOF")) imode = 1;
934 if (!strcmp(mode, "GRID")) imode = 2;
935 TString username = gSystem->Getenv("alien_API_USER");
936 switch (imode) {
937 case 0:
938 break;
939 case 1:
940 if (!username.Length()) {
941 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
942 1. Have called: alien-token-init <username>\n \
943 2. Have called: >source /tmp/gclient_env_$UID");
944 return kFALSE;
945 }
946 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
947 username.Data(), kProofCluster.Data());
948 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
949// TProof::Open(Form("%s@%s:31093", username.Data(), kProofCluster.Data()));
950 TProof::Open(Form("%s@%s", username.Data(), kProofCluster.Data()));
951 if (!gProof) {
952 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
953 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
954 return kFALSE;
955 }
956 if(kProofClearPackages)gProof->ClearPackages();
957
958 if(kProofSaveToAlien){
959 TGrid::Connect("alien://");
960 if (gGrid) {
961 TString homedir = gGrid->GetHomeDirectory();
962 TString workdir = homedir + kTrainName;
963 if (!gGrid->Cd(workdir)) {
964 gGrid->Cd(homedir);
965 if (gGrid->Mkdir(workdir)) {
966 gGrid->Cd(kTrainName);
967 ::Info("AnalysisTrainPWG4Jets::Connect()", "Directory %s created", gGrid->Pwd());
968 }
969 }
970 gGrid->Mkdir("proof_output");
971 gGrid->Cd("proof_output");
972 kProofOutdir = Form("alien://%s", gGrid->Pwd());
973 }
974 }
975 break;
976 case 2:
977 if (!username.Length()) {
978 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
979 1. Have called: alien-token-init <username>\n \
980 2. Have called: >source /tmp/gclient_env_$UID");
981 return kFALSE;
982 }
983 if (kPluginUse && !gSystem->Getenv("alien_CLOSE_SE")) {
984 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode),
985 "When using the AliEn plugin it is preferable to define the \
986 variable alien_CLOSE_SE in your environment.");
987 return kFALSE;
988 }
989 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to AliEn ...",
990 username.Data());
991 TGrid::Connect("alien://");
992 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
993 break;
994 default:
995 ::Error("AnalysisTrainPWG4Jets.C::Connect", "Unknown run mode: %s", mode);
996 return kFALSE;
997 }
998 ::Info("AnalysisTrainPWG4Jets.C::Connect","Connected in %s mode", mode);
999 return kTRUE;
1000}
1001
1002//______________________________________________________________________________
1003Bool_t LoadCommonLibraries(const char *mode)
1004{
1005// Load common analysis libraries.
1006 Int_t imode = -1;
1007 if (!strcmp(mode, "LOCAL")) imode = 0;
1008 if (!strcmp(mode, "PROOF")) imode = 1;
1009 if (!strcmp(mode, "GRID")) imode = 2;
1010 if (!gSystem->Getenv("ALICE_ROOT")) {
1011 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Analysis train requires that ALICE_ROOT is set to pick up Configurations");
1012 return kFALSE;
1013 }
1014 Bool_t success = kTRUE;
1015 // ROOT libraries
1016 gSystem->Load("libTree.so");
1017 gSystem->Load("libGeom.so");
1018 gSystem->Load("libVMC.so");
1019 gSystem->Load("libPhysics.so");
1020
1021 // Load framework classes. Par option ignored here.
1022 switch (imode) {
1023 case 0:
1024 case 2:
1025 if (kUseCPAR) {
1026 success &= LoadLibrary("STEERBase", mode, kTRUE);
1027 success &= LoadLibrary("ESD", mode, kTRUE);
1028 success &= LoadLibrary("AOD", mode, kTRUE);
1029 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
1030 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
1031 success &= LoadLibrary("EventMixing", mode,kTRUE);
1032 success &= LoadLibrary("CORRFW", mode, kTRUE);
1033 } else {
1034 success &= LoadLibrary("libSTEERBase.so", mode);
1035 success &= LoadLibrary("libESD.so", mode);
1036 success &= LoadLibrary("libAOD.so", mode);
1037 success &= LoadLibrary("libANALYSIS.so", mode);
1038 success &= LoadLibrary("libANALYSISalice.so", mode);
1039 success &= LoadLibrary("libEventMixing.so", mode);
1040 success &= LoadLibrary("libCORRFW.so", mode);
1041 gROOT->ProcessLine(".include $ALICE_ROOT/include");
1042 }
1043 break;
1044 case 1:
1045 Int_t ires = -1;
1046 if (kProofUseAFPAR && !gSystem->AccessPathName(kProofAFversion)) ires = gProof->UploadPackage(kProofAFversion);
1047 if (ires < 0) {
1048 success &= LoadLibrary("STEERBase", mode);
1049 success &= LoadLibrary("ESD", mode);
1050 success &= LoadLibrary("AOD", mode);
1051 success &= LoadLibrary("ANALYSIS", mode);
1052 success &= LoadLibrary("ANALYSISalice", mode);
1053 success &= LoadLibrary("EventMixing", mode);
1054 success &= LoadLibrary("CORRFW", mode);
1055 } else {
1056 ires = gProof->EnablePackage(kProofAFversion);
1057 if (ires<0) success = kFALSE;
1058 success &= LoadLibrary("CORRFW", mode);
1059 }
1060 break;
1061 default:
1062 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
1063 return kFALSE;
1064 }
1065 if (success) {
1066 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
1067 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
1068 gSystem->GetIncludePath());
1069 } else {
1070 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: FAILED");
1071 }
1072
1073 return success;
1074}
1075
1076//______________________________________________________________________________
1077Bool_t LoadAnalysisLibraries(const char *mode)
1078{
1079// Load common analysis libraries.
1080 Bool_t success = kTRUE;
1081 if (useTender) {
1082 if (!LoadLibrary("TENDER", mode, kTRUE) ||
1083 !LoadLibrary("TENDERSupplies", mode, kTRUE)) return kFALSE;
1084 }
1085 if (iESDfilter) {
1086 /*
1087 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
1088 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
1089 */
1090 }
1091 // JETAN
1092 if (iJETANLib) {
1093 // this part needs some rework in case we do not need the fastjed finders for processing
1094 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
1095 if (!strcmp(mode, "PROOF")){
1096 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libCGAL.so\"\)", kTRUE);
1097 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libfastjet.so\"\)", kTRUE);
1098 // problem when loading siscone copiled with different gcc version??
1099 // gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libsiscone.so\"\)", kTRUE);
1100 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libSISConePlugin.so\"\)", kTRUE);
1101 }
1102 if(!kUsePAR){
1103 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
1104 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
1105 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
1106 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
1107 }
1108 else{
1109 // par files plus FASTJET needs some extra work... need to change
1110 // the loading sequence in the auto generated .C file
1111 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
1112 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
1113 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
1114 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
1115 }
1116 if (!LoadLibrary("FASTJETAN", mode, kTRUE)) return kFALSE;
1117 }
1118 if(iPWG4JetTasks){
1119 if (!LoadLibrary("PWG4JetTasks", mode, kTRUE)) return kFALSE;
1120 }
1121
1122 if(iEMCUtilLibs){
1123 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
1124 !LoadLibrary("PHOSUtils", mode, kTRUE)) return kFALSE;
1125 }
1126
1127 if (iPWG4PartCorrLibs) {
1128 if (!LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
1129 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
1130 }
1131 if(iPWG4JCORRAN){
1132 // PWG4 particle correlations
1133 if(!LoadLibrary("PWG4JCORRAN",mode,kTRUE))return kFALSE;
1134 }
1135 if (iPWG4JetCorr) {
1136 if (!LoadLibrary("PWG4JetCorrel", mode, kTRUE)) return kFALSE;
1137 }
1138 if (iPWG4omega3pi) {
1139 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
1140 }
1141 if (iPWG4GammaConvLib) {
1142 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
1143 }
1144
1145 ::Info("AnalysisTrainPWG4Jets.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
1146 return kTRUE;
1147}
1148
1149//______________________________________________________________________________
1150Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
1151{
1152// Load a module library in a given mode. Reports success.
1153 Int_t imode = -1;
1154 Int_t result;
1155 TString smodule(module);
1156 if (!strcmp(mode, "LOCAL")) imode = 0;
1157 if (!strcmp(mode, "PROOF")) imode = 1;
1158 if (!strcmp(mode, "GRID")) imode = 2;
1159 TString mod(module);
1160 if (!mod.Length()) {
1161 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Empty module name");
1162 return kFALSE;
1163 }
1164 // If a library is specified, just load it
1165 if (smodule.EndsWith(".so")) {
1166 mod.Remove(mod.Index(".so"));
1167 result = gSystem->Load(mod);
1168 if (result < 0) {
1169 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load library %s", module);
1170 return kFALSE;
1171 }
1172 if (rec) anaLibs += Form("%s.so ",mod.Data());
1173 if (rec) anaLibsExtra += Form("%s.so ",mod.Data());
1174 return kTRUE;
1175 }
1176 // Check if the library is already loaded
1177 if (strlen(gSystem->GetLibraries(Form("%s.so", module), "", kFALSE)) > 0)
1178 return kTRUE;
1179 switch (imode) {
1180 case 0:
1181 case 2:
1182 if (kUsePAR) {
1183 result = SetupPar(module);
1184 if (rec) anaPars += Form("%s.par ", module);
1185 } else {
1186 result = gSystem->Load(Form("lib%s.so", module));
1187 if (rec) anaLibs += Form("lib%s.so ", module);
1188 }
1189 break;
1190 case 1:
1191 if(!gSystem->AccessPathName(module)){
1192 ::Info("AnalysisTrainPWG4Jets.C::LoadLibrary", "Removing directory %s",module);
1193 gSystem->Exec(Form("rm -rf %s",module));
1194 }
1195 result = gProof->UploadPackage(module);
1196 if (result<0) {
1197 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
1198 if (result<0) {
1199 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
1200 return kFALSE;
1201 }
1202 }
1203 result = gProof->EnablePackage(module);
1204 break;
1205 default:
1206 return kFALSE;
1207 }
1208 if (result < 0) {
1209 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load module %s", module);
1210 return kFALSE;
1211 }
1212 return kTRUE;
1213}
1214
1215
1216
1217//______________________________________________________________________________
1218Bool_t LoadSource(const char *source, const char *mode, Bool_t rec=kFALSE)
1219{
1220// Load a module library in a given mode. Reports success.
1221 Int_t imode = -1;
1222 Int_t result = -1;
1223 if (!strcmp(mode, "LOCAL")) imode = 0;
1224 if (!strcmp(mode, "PROOF")) imode = 1;
1225 if (!strcmp(mode, "GRID")) imode = 2;
1226 TString ssource(source);
1227 TString basename = gSystem->BaseName(ssource.Data());
1228 if (!ssource.Length()) {
1229 ::Error("AnalysisTrainPWG4Jets.C::LoadSource", "Empty task name");
1230 return kFALSE;
1231 }
1232 // we have a source code so compile it
1233 if (ssource.EndsWith(".cxx")) {
1234 // need to copy it here other wise the path is also used on grid...
1235 ssource.Remove(ssource.Index(".cxx"));
1236 basename.Remove(basename.Index(".cxx"));
1237 Printf("LoadSources:: Copying... path %s{cxx,h}",ssource.Data());
1238 gSystem->Exec(Form("cp %s.cxx . ",ssource.Data()));
1239 gSystem->Exec(Form("cp %s.h . ",ssource.Data()));
1240 // Path to code
1241 // only needed for local compilation, in grid and proof mode
1242 // the task headers are uploaded
1243 // path.Remove(path.Index(gSystem->BaseName(path.Data())));
1244 // Printf("LoadSources:: Including path %s",path.Data());
1245 // if(path.Length()>0)gROOT->ProcessLine(Form(".include %s",path.Data()));
1246 Printf("LoadSources:: Loading... path %s",basename.Data());
1247 switch (imode) {
1248 case 0:
1249 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
1250 break;
1251 case 1:
1252 result = gProof->LoadMacro(Form("%s.cxx++g",basename.Data()));
1253 break;
1254 case 2:
1255 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
1256 if (rec){
1257 // what we want to compile
1258 anaSources += Form("%s.cxx ",basename.Data());
1259 // what we need as input...
1260 anaLibs += Form("%s.cxx %s.h ",basename.Data(),basename.Data());
1261 }
1262 break;
1263 default:
1264 return kFALSE;
1265 }
1266 }
1267 if (result < 0) {
1268 ::Error("AnalysisTrainPWG4Jets.C::LoadSources", "Could not load source %s", source);
1269 return kFALSE;
1270 }
1271 return kTRUE;
1272}
1273
1274
1275//______________________________________________________________________________
1276TChain *CreateChain(const char *mode, const char *plugin_mode)
1277{
1278// Create the input chain
1279 Int_t imode = -1;
1280 if (!strcmp(mode, "LOCAL")) imode = 0;
1281 if (!strcmp(mode, "PROOF")) imode = 1;
1282 if (!strcmp(mode, "GRID")) imode = 2;
1283 TChain *chain = NULL;
1284 // Local chain
1285 switch (imode) {
1286 case 0:
1287 if (iAODanalysis) {
1288 if (!kLocalXMLDataset.Length()) {
1289 // Local AOD
1290 chain = new TChain("aodTree");
1291 TString line;
1292 ifstream in;
1293 in.open(kLocalDataList.Data());
1294 while (in.good()) {
1295 in >> line;
1296 if (line.Length() == 0) continue;
1297 // cout << " line = " << line << endl;
1298 chain->Add(line.Data());
1299 }
1300 } else {
1301 // Interactive AOD
1302 chain = CreateChainSingle(kLocalXMLDataset, "aodTree");
1303 }
1304 } else {
1305 if (!kLocalXMLDataset.Length()) {
1306 // Local ESD
1307 chain = new TChain("esdTree");
1308 TString line;
1309 ifstream in;
1310 in.open(kLocalDataList.Data());
1311 while (in.good()) {
1312 in >> line;
1313 if (line.Length() == 0) continue;
1314 cout << " line = " << line << endl;
1315 chain->Add(line.Data());
1316 }
1317 } else {
1318 // Interactive ESD
1319 chain = CreateChainSingle(kLocalXMLDataset, "esdTree");
1320 }
1321 }
1322 break;
1323 case 1:
1324 break;
1325 case 2:
1326 if (kPluginUse) {
1327// AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1328// AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1329 } else {
1330 TString treeName = "esdTree";
1331 if (iAODanalysis) treeName = "aodTree";
1332 chain = CreateChainSingle("wn.xml", treeName);
1333 }
1334 break;
1335 default:
1336 }
1337 if (chain && chain->GetNtrees()) return chain;
1338 return NULL;
1339}
1340
1341//______________________________________________________________________________
1342TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
1343{
1344 printf("*******************************\n");
1345 printf("*** Getting the ESD Chain ***\n");
1346 printf("*******************************\n");
1347 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
1348
1349 if (!myCollection) {
1350 ::Error("AnalysisTrainPWG4Jets.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
1351 return NULL ;
1352 }
1353
1354 TChain* chain = new TChain(treeName);
1355 myCollection->Reset() ;
1356 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
1357 chain->ls();
1358 return chain;
1359}
1360
1361//______________________________________________________________________________
1362Int_t SetupPar(char* pararchivename)
1363{
1364 if (!pararchivename || !strlen(pararchivename)) return -1;
1365 char processline[1024];
1366 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
1367 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
1368 ::Info("AnalysisTrainPWG4Jets.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
1369 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
1370 Form("%s.par",pararchivename));
1371 } else {
1372 ::Error("AnalysisTrainPWG4Jets.C::SetupPar", "Cannot find %s.par", pararchivename);
1373 return -1;
1374 }
1375 }
1376 if (kPluginUse && kSaveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, kTrainName.Data()));
1377 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
1378
1379 TString ocwd = gSystem->WorkingDirectory();
1380 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
1381
1382 // check for BUILD.sh and execute
1383 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
1384 printf("*******************************\n");
1385 printf("*** Building PAR archive ***\n");
1386 printf("*******************************\n");
1387 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
1388 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
1389 return -1;
1390 }
1391 }
1392
1393 // check for SETUP.C and execute
1394 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
1395 printf("*******************************\n");
1396 printf("*** Setup PAR archive ***\n");
1397 printf("*******************************\n");
1398 gROOT->Macro("PROOF-INF/SETUP.C");
1399 }
1400 if (!gSystem->ChangeDirectory(ocwd.Data())) return -1;
1401 return 0;
1402}
1403
1404//______________________________________________________________________________
1405AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
1406{
1407// Check if user has a valid token, otherwise make one. This has limitations.
1408// One can always follow the standard procedure of calling alien-token-init then
1409// source /tmp/gclient_env_$UID in the current shell.
1410// if (!AliAnalysisGrid::CreateToken()) return NULL;
1411 AliAnalysisAlien *plugin = new AliAnalysisAlien();
1412// Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
1413 plugin->SetRunMode(plugin_mode);
1414 if (kPluginUseProductionMode) plugin->SetProductionMode();
1415 plugin->SetJobTag(kJobTag);
1416 plugin->SetNtestFiles(2);
1417// plugin->SetPreferedSE("ALICE::NIHAM::File");
1418// Set versions of used packages
1419 plugin->SetAPIVersion("V1.1x");
1420 // plugin->SetAPIVersion("V1.0x");
1421// plugin->SetAPIVersion("V2.4");
1422 plugin->SetROOTVersion(kPluginRootVersion);
1423 plugin->SetAliROOTVersion(kPluginAliRootVersion);
1424// Declare input data to be processed.
1425// Method 1: Create automatically XML collections using alien 'find' command.
1426// Define production directory LFN
16484410 1427 plugin->SetGridDataDir(kGridDataDir.Data());
36c36a0c 1428// Set data search pattern
1429 if (iAODanalysis) plugin->SetDataPattern(" *AliAOD.root");
1430 // else plugin->SetDataPattern(Form(" %s/*/*ESD.tag.root",kGridPassPattern.Data()));
16484410 1431 else {
1432 plugin->SetDataPattern(Form(" %s/*/*AliESDs.root",kGridPassPattern.Data()));
1433 }
36c36a0c 1434// ...then add run numbers to be considered
16484410 1435 plugin->SetRunRange(kGridRunRange[0], kGridRunRange[1]);
1436 plugin->SetRunPrefix("000");
1437 /*
36c36a0c 1438 for (Int_t i=kGridRunRange[0]; i<=kGridRunRange[1]; i++) {
1439 Printf("AnalysisTrainPWG4Jets Adding run number %s", Form(kGridRunPattern.Data(),i));
1440 plugin->AddRunNumber(Form(kGridRunPattern.Data(),i));
1441 }
16484410 1442 */
36c36a0c 1443
1444 if(kGridLocalRunList.Length()>0){
1445 ifstream in1;
1446 in1.open(kGridLocalRunList.Data());
1447 int iRun;
1448 int icount = 0;
1449 /*
1450 char c;
1451 char cLine[250];
1452 while(!in1.eof()){
1453 c = in1.get();
1454 if ( (c >= '0') && (c <= '9') )
1455 {
1456 in1.putback (c);
1457 in1>>iRun;
1458 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1459 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1460 }
1461 else
1462 {
1463 in1.putback (c);
1464 in1.getline(cLine,250);
1465
1466 }
1467 }
1468 */
1469
1470 Int_t nRun = 0;
1471
1472 // just use run numbers, negatives will be excluded
1473 while(in1>>iRun){
1474 if(iRun>=0){
1475 if(iRun>=0&&nRun>=kGridOffsetRunFromList&&(nRun<kGridMaxRunsFromList)){
1476 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1477 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1478
1479 }
1480 else{
1481 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d", iRun);
1482 }
1483 nRun++;
1484 }
1485 else{
1486 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d", iRun);
1487 }
1488 }
1489 }
1490
1491// Method 2: Declare existing data files (raw collections, xml collections, root file)
1492// If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
1493// XML collections added via this method can be combined with the first method if
1494// the content is compatible (using or not tags)
1495// plugin->AddDataFile("tag.xml");
1496// plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
1497// Define alien work directory where all files will be copied. Relative to alien $HOME.
1498 TString alien_workdir = "";
1499
1500 if (iAODanalysis) alien_workdir += "analysisAOD";
1501 else alien_workdir += "analysisESD";
1502 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1503 plugin->SetGridWorkingDir(alien_workdir.Data());
1504
1505 // Declare alien output directory. Relative to working directory.
1506 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1507 plugin->SetGridOutputDir(kGridOutdir);
1508
1509 // Add external packages
1510 if (iJETAN||iDIJETAN) {
1511 plugin->AddExternalPackage("boost::v1_43_0");
1512 plugin->AddExternalPackage("cgal::v3.6");
1513 plugin->AddExternalPackage("fastjet::v2.4.2");
1514 }
1515
1516
1517 // set extra libs before par file compilation
1518 anaLibs += kGridExtraFiles;
1519 anaLibs = anaLibs.Strip();
1520 Printf("anaLibs %s",anaLibs.Data());
1521 Printf("anaLibsExtra %s",anaLibsExtra.Data());
1522
1523 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs.Data());
1524 if (anaLibsExtra.Length()) plugin->SetAdditionalRootLibs(anaLibsExtra.Data());
1525
1526 TString ana_sources = "";
1527 TString ana_add = "";
1528 if (kUsePAR && anaPars.Length()) {
1529 printf("%s\n", anaPars.Data());
1530 TObjArray *arr;
1531 TObjString *objstr;
1532 arr = anaPars.Tokenize(" ");
1533 TIter next(arr);
1534 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
1535 delete arr;
1536 }
1537
1538// Declare the analysis source files names separated by blancs. To be compiled runtime
1539// using ACLiC on the worker nodes.
1540 ana_sources = anaSources.Strip();
1541// Declare all libraries (other than the default ones for the framework. These will be
1542// loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
1543
1544 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
1545 plugin->SetExecutableCommand(kPluginExecutableCommand.Data());
1546 // Declare the output file names separated by blancs.
1547 // (can be like: file.root or file.root@ALICE::Niham::File)
1548 plugin->SetMergeExcludes(kGridMergeExclude);
1549 plugin->SetMaxMergeFiles(kGridMaxMergeFiles);
1550 plugin->SetNrunsPerMaster(kGridRunsPerMaster);
1551 plugin->SetMergeViaJDL(kPluginMergeViaJDL);
1552 // Use fastread option
1553 plugin->SetFastReadOption(kPluginFastReadOption);
1554 // UseOverwrite mode
1555 plugin->SetOverwriteMode(kPluginOverwriteMode);
1556 // Optionally define the files to be archived.
1557 // plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
1558 plugin->SetOutputToRunNo(kPluginOutputToRunNumber); // write the output to subdirs named after run number
1559
1560 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
1561 plugin->SetAnalysisMacro(Form("%s.C", kTrainName.Data()));
1562 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
1563 plugin->SetSplitMaxInputFileNumber(kGridFilesPerJob);
1564 // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
1565 // plugin->SetMaxInitFailed(5);
1566 // Optionally resubmit threshold.
1567 // plugin->SetMasterResubmitThreshold(90);
1568 // Optionally set time to live (default 30000 sec)
1569 plugin->SetTTL(54000); // 15h...
1570 // Optionally set input format (default xml-single)
1571 plugin->SetInputFormat("xml-single");
1572 // Optionally modify the name of the generated JDL (default analysis.jdl)
1573 plugin->SetJDLName(Form("%s.jdl", kTrainName.Data()));
1574 // Optionally modify the executable name (default analysis.sh)
1575 plugin->SetExecutable(Form("%s.sh", kTrainName.Data()));
1576 // Optionally modify job price (default 1)
1577 plugin->SetPrice(1);
1578 // Optionally modify split mode (default 'se')
1579 plugin->SetSplitMode("se");
1580 return plugin;
1581}
1582//______________________________________________________________________________
1583Bool_t LoadConfig(const char *filename)
1584{
1585// Read train configuration from file
1586 if (gSystem->AccessPathName(filename)) {
1587 ::Error("AnalysisTrainPWG4Jets.C::LoadConfig", "Config file name not found");
1588 return kFALSE;
1589 }
1590 gROOT->ProcessLine(Form(".x %s", filename));
1591 ::Info("AnalysisTrainPWG4Jets.C::LoadConfig", "Train configuration loaded from file %s", filename);
1592 return kTRUE;
1593}