Stefan Rosegger and Jim Thomas
[u/mrichter/AliRoot.git] / PWG4 / macros / AnalysisTrainPWG4Jets.C
CommitLineData
c38e3b95 1//===================== ANALYSIS TRAIN =========================================
2// To use: copy this macro to your work directory, modify the global part to match
3// your needs, then run root.
4// root[0] .L AnalysisTrain.C
5// Grid full mode as below (other modes: test, offline, submit, terminate)
121e4bd5 6// root[1] AnalysisTrainPWG-244Jets("grid", "full")
c38e3b95 7// CAF mode (requires root v5-23-02 + aliroot v4-16-Rev08)
8// root[2] AnalysisTrainPWG4Jets("proof")
9// Local mode requires AliESds.root or AliAOD.root in ./data directory
10// root[3] AnalysisTrainPWG4Jets("local")
11// In proof and grid modes, a token is needed and sourcing the produced environment file.
12//
13// If 'saveTrain' flag is set, the train will generate a directory name and run
14// in this directory. A configuration file 'ConfigTrain.C' will be generated.
15// One can replay at any time the train via:
16// root[1] AnalysisTrainPWG4Jets(ana_mode, plugin_mode, "train_default_<date>/ConfigTrain.C")
17
18// For Usage with fastjet run in "offline" first and then "submit"
19// jdl and analysismacro are automatically patched after "offline" mode
20
21// =============================================================================
22// ### General Steering variables
23// =============================================================================
24//== general setup variables
25TString kTrainName = "testAnalysis"; // *CHANGE ME* (no blancs or special characters)
26TString kJobTag = "PWG4 Jet Tasks analysis train configured"; // *CHANGE ME*
27
28// Usage of par files ONLY in grid mode and ONLY if the code is not available
29// in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
30// To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
31// AliRoot.
32Bool_t kUsePAR = kFALSE; // use par files for extra libs
33Bool_t kUseCPAR = kFALSE; // use par files for common libs
34Bool_t kFillAOD = kFALSE; // switch of AOD filling for on the fly analysis
35
36//== general input and output variables
9a5c5b1e 37
c38e3b95 38Int_t iAODanalysis = 1; // Analysis on input AOD's
39Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
40Int_t iESDfilter = 0; // ESD to AOD filter (barrel + muon tracks)
e84da0a5 41Int_t iPhysicsSelection = 1; // ESD to AOD filter (barrel + muon tracks)
c38e3b95 42Bool_t kUseKinefilter = kFALSE; // use Kinematics filter
43Bool_t kUseMuonfilter = kFALSE; // use Kinematics filter
44TString kCommonOutputFileName = "PWG4_JetTasksOutput.root";
45
46
47//== general process variables
48
49// ### Other flags to steer the analysis
50//==============================================================================
9a5c5b1e 51Bool_t kSkipTerminate = kTRUE; // Do not call Teminate
c38e3b95 52Bool_t kUseDate = kFALSE; // use date in train name
53Bool_t kUseDebug = kTRUE; // activate debugging
c28abe00 54Int_t kUseSysInfo = 0; // activate debugging
82ebd295 55Long_t kNumberOfEvents = 1234567890; // number of events to process from the chain
c38e3b95 56Bool_t kUseMC = kTRUE; // use MC info
57Bool_t kIsMC = kTRUE; // is MC info, if false it overwrites Use(AOD)MC
58Bool_t kUseAODMC = kTRUE; // use MC infA
59Bool_t kUseESDTags = kFALSE; // use ESD tags for selection
60Bool_t kUseTR = kFALSE; // use track references
61Bool_t kUseAODTags = kFALSE; // use AOD tags
62Bool_t kSaveTrain = kFALSE; // save train configuration as:
63
9a5c5b1e 64
c38e3b95 65// ### Analysis modules to be included. Some may not be yet fully implemented.
66//==============================================================================
67Int_t iJETAN = 1; // Jet analysis (PWG4) // 1 write standard 2 write non-standard jets, 3 wrtie both
68Int_t iDIJETAN = 1;
e6993a52 69Int_t iJETANLib = 1;
c38e3b95 70Int_t iPWG1QASym = 0; // Eva's QA task compiled on the fly...
71Int_t iPWG4JetTasks = 0; // all jet tasks flag for lib laoding
72Int_t iPWG4JetServices = 0; // jet spectrum analysis
73Int_t iPWG4JetSpectrum = 0; // jet spectrum analysis
58ef946c 74Int_t iPWG4JCORRAN = 0; // JCORRAN module
c38e3b95 75Int_t iPWG4UE = 0; // Underlying Event analysis
c166d299 76Int_t iPWG4TmpSourceSara = 0; // Underlying Event analysis not in svn
77Int_t iPWG4TmpSourceFrag = 0; // Bastian's Fragmentation function not in svn
9f77f0ce 78Int_t iPWG4JetChem = 0; // Jet chemistry
c38e3b95 79Int_t iPWG4PtQAMC = 0; // Marta's QA tasks
80Int_t iPWG4PtSpectra = 0; // Marta's QA tasks
81Int_t iPWG4PtQATPC = 0; // Marta's QA tasks
82Int_t iPWG4ThreeJets = 0; // Sona's thrust task
b53f2e4f 83Int_t iPWG4KMeans = 0; // Andreas' KMeans task
d2e6cdd5 84Int_t iPWG4Cluster = 0; // CKB cluster task
911a740f 85Int_t iPWG4PartCorrLibs = 0; // Gustavo's part corr analysis
c38e3b95 86Int_t iPWG4PartCorr = 0; // Gustavo's part corr analysis
d2e6cdd5 87Int_t iPWG4CaloQA = 0; // Gustavo's part corr analysis
88Int_t iPWG4JetCorr = 0; // Paul's jet corr analysis
911a740f 89Int_t iPWG4Tagged = 0; // Gustavo's part corr analysis
121e4bd5 90Int_t iPWG4omega3pi = 0; // Omega to 3 pi analysis (PWG4)
53c63663 91Int_t iPWG4GammaConv = 0; // Gamma Conversio
c38e3b95 92Int_t kHighPtFilterMask = 16; // change depending on the used AOD Filter
e6993a52 93TString kDeltaAODJetName = "AliAOD.Jets.root";
53c63663 94TString kDeltaAODPartCorrName = "deltaAODPartCorr.root";
c38e3b95 95
96
97//==============================================================================
98// ### PROOF Steering varibales
99//==============================================================================
100//== proof setup variables
101TString kProofCluster = "alicecaf.cern.ch";
102Bool_t kProofUseAFPAR = kFALSE; // use AF special par file
103TString kProofAFversion = "AF-v4-17";
104//== proof input and output variables
105TString kProofDataSet = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
106Bool_t kProofSaveToAlien = kFALSE; // save proof outputs in AliEn train_[trainName]_ddMonthyyyy_time.C
107TString kProofOutdir = "";
108Bool_t kProofClearPackages = kFALSE;
109Int_t kProofEvents = 10000;
110Int_t kProofOffset = 0;
111//== proof process variables
112
113
114//==============================================================================
115// ### Grid plugin Steering varibiables
116//==============================================================================
117//== grid plugin setup variables
118Bool_t kPluginUse = kTRUE; // do not change
119Bool_t kPluginUseProductionMode = kFALSE; // use the plugin in production mode
d3af0232 120TString kPluginRootVersion = "v5-26-00b-7"; // *CHANGE ME IF MORE RECENT IN GRID*
121TString kPluginAliRootVersion = "v4-19-15-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
9a5c5b1e 122Bool_t kPluginMergeViaJDL = kTRUE; // merge via JDL
123Bool_t kPluginFastReadOption = kFALSE; // use xrootd tweaks
124Bool_t kPluginOverwriteMode = kTRUE; // overwrite existing collections
dc6a7461 125Int_t kPluginOutputToRunNumber = 1; // write the output to subdirs named after run number
c38e3b95 126// TString kPluginExecutableCommand = "root -b -q";
127TString kPluginExecutableCommand = "source /Users/kleinb/setup_32bit_aliroot_trunk_clean_root_trunk.sh; alienroot -b -q ";
9a5c5b1e 128
c38e3b95 129// == grid plugin input and output variables
130TString kGridDatadir = "/alice/sim/PDC_08b/LHC09a1/AOD/";
131TString kGridLocalRunList = "";
132TString kGridOutdir = ""; // AliEn output directory. If blank will become output_<kTrainName>
3878a941 133TString kGridDataSet = ""; // sub working directory not to confuse different run xmls
c38e3b95 134Int_t kGridRunRange[2] = {0, -1}; // Set the run range
135TString kGridRunPattern = "%03d"; // important for leading zeroes!!
136TString kGridPassPattern = "";
137TString kGridExtraFiles = ""; // files that will be added to the input list in the JDL...
138Int_t kGridMaxMergeFiles = 50; // Number of files merged in a chunkgridrunragn
139TString kGridMergeExclude = "AliAOD.root"; // Files that should not be merged
6408fe42 140TString kGridOutputStorages = "disk=2"; // Make replicas on the storages
c38e3b95 141// == grid process variables
c28abe00 142Int_t kGridRunsPerMaster = 100; // Number of runs per master job
e84da0a5 143Int_t kGridFilesPerJob = 100; // Maximum number of files per job (gives size of AOD)
c38e3b95 144
145//==============================================================================
146// ### Local Steering variables
147//==============================================================================
148//== local setup variables
149//== local input and output variables
150TString kLocalXMLDataset = ""; // Change local xml dataset for local interactive analysis
151TString kLocalDataList = "local_deltaaod.txt"; // Change local xml dataset for local interactive analysis
152// == local process variables
153
154
155
156// Temporaries.
157TString anaPars = "";
158TString anaLibs = "";
e84da0a5 159TString anaLibsExtra = "";
c38e3b95 160TString anaSources = "";
161// Function signatures
162class AliAnalysisAlien;
163
164//______________________________________________________________________________
165void AnalysisTrainPWG4Jets(const char *analysis_mode="local",
166 const char *plugin_mode="",
167 const char *config_file="",Int_t iOffset = 0)
168{
169// Main analysis train macro. If a configuration file is provided, all parameters
170// are taken from there but may be altered by CheckModuleFlags.
3878a941 171
c38e3b95 172 if (strlen(config_file) && !LoadConfig(config_file)) return;
3878a941 173
c38e3b95 174 if(iOffset)kProofOffset = iOffset;
175 TString smode(analysis_mode);
176 smode.ToUpper();
177 if (kSaveTrain)WriteConfig();
178 // Check compatibility of selected modules
179 CheckModuleFlags(smode);
e84da0a5 180 // gROOT->ProcessLine(".trace");
c38e3b95 181
182 printf("==================================================================\n");
183 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", kTrainName.Data(),smode.Data());
184 printf("==================================================================\n");
185 printf("= Configuring analysis train for: =\n");
186 if (iAODanalysis) printf("= AOD analysis =\n");
187 else printf("= ESD analysis =\n");
e84da0a5 188 if (iPhysicsSelection) printf("= Physics selection =\n");
c38e3b95 189 if (iESDfilter) printf("= ESD filter =\n");
190 if (iJETAN) printf("= Jet analysis =\n");
191 printf("==================================================================\n");
d2e6cdd5 192 printf(":: use Fill AOD %d\n", (UInt_t)kFillAOD);
c38e3b95 193 printf(":: use MC truth %d\n", (UInt_t)kUseMC);
194 printf(":: use KINE filter %d\n", (UInt_t)kUseKinefilter);
195 printf(":: use track refs %d\n", (UInt_t)kUseTR);
196 printf(":: use tags %d\n", (UInt_t)kUseESDTags);
197 printf(":: use AOD tags %d\n", (UInt_t)kUseAODTags);
198 printf(":: use debugging %d\n", (UInt_t)kUseDebug);
199 printf(":: use PAR files %d\n", (UInt_t)kUsePAR);
200 printf(":: use AliEn plugin %d\n", (UInt_t)kPluginUse);
4d62ae1a 201 printf(":: use PWG1 QA sym %d\n", iPWG1QASym);
202 printf(":: use PWG4 Source Sara %d\n",iPWG4TmpSourceSara);
203 printf(":: use PWG4 Source BB %d\n",iPWG4TmpSourceFrag);
204 printf(":: use PWG4 Jet Chem %d\n",iPWG4JetChem);
205 printf(":: use PWG4 Jet tasks %d\n",iPWG4JetTasks);
206 printf(":: use PWG4 Jet Services %d\n",iPWG4JetServices);
207 printf(":: use PWG4 Jet Spectrum %d\n",iPWG4JetSpectrum);
208 printf(":: use PWG4 JCORRAN %d\n",iPWG4JCORRAN);
209 printf(":: use PWG4 UE %d \n",iPWG4UE);
210 printf(":: use PWG4 Pt QA MC %d\n",iPWG4PtQAMC);
211 printf(":: use PWG4 Pt Spectra %d\n",iPWG4PtSpectra);
212 printf(":: use PWG4 Pt QA TPC %d\n",iPWG4PtQATPC);
213 printf(":: use PWG4 Three Jets %d\n",iPWG4ThreeJets);
214 printf(":: use PWG4 KMeans %d\n",iPWG4KMeans);
215 printf(":: use PWG4 Cluster %d\n",iPWG4Cluster);
216 printf(":: use PWG4 Part Corr %d\n",iPWG4PartCorr);
217 printf(":: use PWG4 Calo QA %d\n",iPWG4CaloQA);
218 printf(":: use PWG4 Jet Corr %d\n",iPWG4JetCorr);
219 printf(":: use PWG4 Tagged %d\n",iPWG4Tagged);
220 printf(":: use PWG4 omega to 3 pi %d\n",iPWG4omega3pi);
221 printf(":: use PWG4 Gamma Conv %d\n",iPWG4GammaConv);
222 printf(":: use HighPt FilterMask %d\n",kHighPtFilterMask);
3878a941 223
c38e3b95 224 //==========================================================================
225 // Connect to back-end system
226 if (!Connect(smode)) {
227 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
228 return;
229 }
230
231 // Load common libraries and set include path
232 if (!LoadCommonLibraries(smode)) {
233 ::Error("AnalysisTrain", "Could not load common libraries");
234 return;
235 }
3878a941 236
237
c38e3b95 238
239 // Make the analysis manager and connect event handlers
e84da0a5 240 AliAnalysisManager *mgr = new AliAnalysisManager("PWG4Train", "pwg4 mini train");
c38e3b95 241 if (kCommonOutputFileName.Length()>0)mgr->SetCommonFileName(kCommonOutputFileName.Data());
242 if (kProofSaveToAlien) mgr->SetSpecialOutputLocation(kProofOutdir);
4a6f59cb 243 mgr->SetNSysInfo(0);
c38e3b95 244 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
53c63663 245 if (kUseSysInfo)mgr->SetNSysInfo(kUseSysInfo);
9a5c5b1e 246 mgr->SetSkipTerminate(kSkipTerminate);
4a6f59cb 247
c38e3b95 248 // Load analysis specific libraries
249 if (!LoadAnalysisLibraries(smode)) {
250 ::Error("AnalysisTrain", "Could not load analysis libraries");
251 return;
252 }
253
254 // Create input handler (input container created automatically)
255 if (iAODanalysis) {
256 // AOD input handler
257 AliAODInputHandler *aodH = new AliAODInputHandler();
258 mgr->SetInputEventHandler(aodH);
e6993a52 259 if (iPWG4JetTasks) aodH->AddFriend(Form("deltas/%s",kDeltaAODJetName.Data()));
260 if (iPWG4PartCorr) aodH->AddFriend(Form("deltas/%s"kDeltaAODJetName.Data()));
c38e3b95 261 } else {
262 // ESD input handler
263 AliESDInputHandler *esdHandler = new AliESDInputHandler();
264 if (kUseESDTags) esdHandler->SetReadTags();
c166d299 265 esdHandler->SetReadFriends(kFALSE);
c38e3b95 266 mgr->SetInputEventHandler(esdHandler);
4a6f59cb 267 // if(iPWG4PtQATPC&& !kTrainName.Contains("pass5"))esdHandler->SetActiveBranches("ESDfriend");
c166d299 268
c38e3b95 269 }
f4d11ac8 270
c38e3b95 271 // Monte Carlo handler
272 if (kUseMC && !iAODanalysis) {
273 AliMCEventHandler* mcHandler = new AliMCEventHandler();
274 mgr->SetMCtruthEventHandler(mcHandler);
275 mcHandler->SetReadTR(kUseTR);
276 }
277 // AOD output container, created automatically when setting an AOD handler
278 if (iAODhandler) {
279 // AOD output handler
280 AliAODHandler* aodHandler = new AliAODHandler();
281 aodHandler->SetOutputFileName("AliAOD.root");
6408fe42 282 aodHandler->SetFillAODforRun(kFillAOD);
c38e3b95 283
284 mgr->SetOutputEventHandler(aodHandler);
121e4bd5 285 //
c38e3b95 286 if (iAODanalysis) {
287
288 // aodHandler->SetCreateNonStandardAOD();
289 // if (iJETAN)aodHandler->SetOutputFileName(kDeltaAODJetName.Data());
290 }
291 AliAnalysisDataContainer * cout_aod = mgr->GetCommonOutputContainer();
292 cout_aod->SetSpecialOutput();
293 }
294 // Debugging if needed
b03b08a3 295
3878a941 296 if (kUseDebug){
297 mgr->SetDebugLevel(3);
298 }
b03b08a3 299 else{
300 AliLog::SetGlobalLogLevel(AliLog::kError);
301 }
c38e3b95 302 //==========================================================================
303 // Create the chain. In this example it is created only from ALIEN files but
304 // can be done to work in batch or grid mode as well.
305 TChain *chain = CreateChain(smode, plugin_mode);
306
307 //==========================================================================
308 // Load the tasks configuration macros for all wagons. These files are supposed now to be
309 // in the current workdir, but in AliEn they will be in the file catalog,
310 // mapped from AliRoot and pecified in the jdl input list.
311
312 // For now connection to top input container and common AOD output container
313 // is done in this macro, but in future these containers will be connected
314 // from each task configuration macro.
e84da0a5 315 if(iPhysicsSelection && !iAODanalysis){
d2e6cdd5 316 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
d8f81b37 317 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kIsMC,kTRUE,kTRUE); // last flag also adds information on
e84da0a5 318 }
319
c38e3b95 320 if (iESDfilter && !iAODanalysis) {
321 // ESD filter task configuration.
322 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskESDFilter.C");
323 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilter(kUseKinefilter,kUseMuonfilter);
324 }
325
326 // AOD tags
327 if (kUseAODTags) {
328 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
329 mgr->AddTask(tagTask);
330 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
331 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
332 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
333 mgr->ConnectOutput(tagTask, 1, coutTags);
334 }
335
336 // Jet analysis
337 if (iJETAN) {
338 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJets.C");
339 AliAnalysisTaskJets *taskjets = 0;
340 if(iJETAN&1)taskjets = AddTaskJets(kHighPtFilterMask);
b53f2e4f 341 if(iJETAN&2){
342 UInt_t selection = 0;
d2e6cdd5 343 if(!kFillAOD) selection = 0xffffff; //&~(1<<13);
58ef946c 344 else selection = 0xffffff&~(1<<13);// selection = 1<<0|1<<1|1<<2|1<<5|1<<6|1<<7|1<<8|1<<9|1<<10|1<<11|1<<12;
b53f2e4f 345 AddTaskJetsDelta(kDeltaAODJetName.Data(),kHighPtFilterMask,kUseAODMC,selection);
346 }
c38e3b95 347 if (!taskjets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
348 }
349
350 if (iDIJETAN) {
351 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskDiJets.C");
352 AliAnalysisTaskDiJets *taskdijets = 0;
82ebd295 353 if(iDIJETAN&1)taskdijets = AddTaskDiJets();
c38e3b95 354 if (!taskdijets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
82ebd295 355 if(iDIJETAN&2){
356 taskdijets = AddTaskDiJets("jetsAOD_CDF07");
357 taskdijets = AddTaskDiJets("jetsAOD_DA07");
358 taskdijets = AddTaskDiJets("jetsAOD_FASTJET07");
359 taskdijets = AddTaskDiJets("jetsAOD_FASTKT07");
360 taskdijets = AddTaskDiJets("jetsAOD_SISCONE07");
361 taskdijets = AddTaskDiJets("jetsAOD_UA107");
362 }
c38e3b95 363 }
364
c38e3b95 365 if(iPWG1QASym){
5dbdc61f 366 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskQAsym.C");
c38e3b95 367 AliAnalysisTaskQASym *taskQASym = AddTaskQAsym(-1);
368 if (!taskQASym) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQASym cannot run for this train conditions - EXCLUDED");
121e4bd5 369 }
c38e3b95 370
121e4bd5 371
372
373 if(iPWG4TmpSourceSara){
374 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskEta.C");
375 AliAnalysisTaskEta *taskEta = AddTaskEta();
376 if (!taskEta) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskEta cannot run for this train conditions - EXCLUDED");
c38e3b95 377 }
378
c166d299 379 if(iPWG4TmpSourceFrag){
380 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFragFunc.C");
381 UInt_t selection = 1<<2;
382 AliAnalysisTaskFragFunc *taskFrag = AddTaskFragFunc(kHighPtFilterMask, kUseAODMC,iPhysicsSelection, selection);
383 if (!taskFrag) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskFragFunc cannot run for this train conditions - EXCLUDED");
384 }
385
c580ebbb 386
9f77f0ce 387 if(iPWG4JetChem){
388 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetChem.C");
389 AliAnalysisTask *taskChem = AddTaskJetChem();
c580ebbb 390 if (!taskChem) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetChem cannot run for this train conditions - EXCLUDED");
391 }
392
393
c38e3b95 394 if(iPWG4JetServices){
395 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetServices.C");
396 AliAnalysisTaskJetServices *taskjetServ = 0;
397 taskjetServ = AddTaskJetServices();
398 if (!taskjetServ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetServices cannot run for this train conditions - EXCLUDED");
53c63663 399 if(kGridRunRange[0]>0)taskjetServ->SetRunRange(kGridRunRange[0],kGridRunRange[1]);
0971dabc 400 else taskjetServ->SetRunRange(104000,125000);
c28abe00 401 if(!kIsMC) taskjetServ->SetRealData(kTRUE);
dc6a7461 402 taskjetServ->SetUsePhysicsSelection((Bool_t)iPhysicsSelection);
9f77f0ce 403 taskjetServ->SetDebugLevel(0);
c38e3b95 404 }
405
c38e3b95 406 if(iPWG4JetSpectrum){
407 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetSpectrum2.C");
408 AliAnalysisTaskJetSpectrum2 *taskjetSpectrum = 0;
b53f2e4f 409 if(iPWG4JetSpectrum&1){
410 taskjetSpectrum = AddTaskJetSpectrum2("jets","",kHighPtFilterMask,iPhysicsSelection);
e6993a52 411 if(!iAODanalysis){
d3af0232 412 // taskjetSpectrum = AddTaskJetSpectrum2("jets","tracks32",32,iPhysicsSelection); // tmp hack to give it a different name
58ef946c 413 // taskjetSpectrum = AddTaskJetSpectrum2("jets","tracks64",64,iPhysicsSelection);
e6993a52 414 }
d2e6cdd5 415 if (!taskjetSpectrum) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetSpectrum2 cannot run for this train conditions - EXCLUDED");
3878a941 416 taskjetSpectrum->SetDebugLevel(1);
b53f2e4f 417 }
d2e6cdd5 418
e6993a52 419 if(iPWG4JetSpectrum&2){
420 UInt_t selection = 0;
421 if(!iAODanalysis) selection = 0xffffff;
422 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
423 AddTaskJetSpectrum2Delta(kHighPtFilterMask,kUseAODMC,iPhysicsSelection,selection);
424 }
c38e3b95 425 }
58ef946c 426 if(iPWG4JCORRAN){
427 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJCORRANTask.C");
428 AliJCORRANTask* corran = AddTaskJCORRAN(kTRUE);
429 if(!corran)::Warning("AnalysisTrainPWG4Jets", "AliJCORRANTask cannot run for this train conditions - EXCLUDED");
430 }
431
c38e3b95 432 if(iPWG4UE){
433 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskUE.C");
434 AliAnalysisTaskUE *taskUE = 0;
435 if(iPWG4UE&1)taskUE = AddTaskUE();
436 if(iPWG4UE&2){
94ee88d4 437 taskUE =AddTaskUE("jetsAOD_CDF04","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
438 taskUE =AddTaskUE("jetsAOD_CDF07","CDF", "LJ", "TRANSV","MSP");
439 taskUE =AddTaskUE("jetsAOD_SISCONE04","CDF", "LJ", "TRANSV","MSP");
440 taskUE =AddTaskUE("jetsAOD_SISCONE07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
441 taskUE =AddTaskUE("jetsAOD_ICDF","CDF","LJ","TRANSV","MSP");
442 taskUE =AddTaskUE("jetsAOD_FASTKT04","CDF", "LJ", "TRANSV","MSP");
443 taskUE =AddTaskUE("jetsAOD_FASTKT07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
58ef946c 444 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta05", "TRANSV","MSP");
445 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta09", "TRANSV","MSP");
c38e3b95 446 }
2bb1f4ca 447
c38e3b95 448 if (!taskUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskUE cannot run for this train conditions - EXCLUDED");
449 }
450
451 if(iPWG4ThreeJets){
452 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskThreeJets.C");
453 AliAnalysisTaskThreeJets *taskThree = AddTaskThreeJets();
454 if(!taskThree)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskThreets cannot run for this train conditions - EXCLUDED");
455 }
c38e3b95 456 if(iPWG4PtQAMC){
457 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQAMC.C");
458 AliPWG4HighPtQAMC *taskQAMC = AddTaskPWG4HighPtQAMC();
459 if (!taskQAMC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQAMC cannot run for this train conditions - EXCLUDED");
460 }
461
462 if(iPWG4PtQATPC){
463 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQATPConly.C");
10295ac3 464 AliPWG4HighPtQATPConly *taskQATPC = 0;
465 if(iPWG4PtQATPC&1)taskQATPC = AddTaskPWG4HighPtQATPConly(1);
466 if(iPWG4PtQATPC&2)taskQATPC = AddTaskPWG4HighPtQATPConly(2);
467
468 if (!taskQATPC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQATPC cannot run for this train conditions - EXCLUDED");
c38e3b95 469 }
3878a941 470
c38e3b95 471 if(iPWG4PtSpectra){
472 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtSpectra.C");
473 AliPWG4HighPtSpectra *taskPtSpectra = AddTaskPWG4HighPtSpectra();
474 if (!taskPtSpectra) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskPtSpectra cannot run for this train conditions - EXCLUDED");
475 }
b53f2e4f 476 if(iPWG4KMeans){
477 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskKMeans.C");
478 AliAnalysisTaskKMeans *taskKMeans = AddTaskKMeans();
479 if (!taskKMeans) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskKMenans cannot run for this train conditions - EXCLUDED");
480 }
481
d2e6cdd5 482 if(iPWG4Cluster){
483 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCluster.C");
484 AliAnalysisTaskJetCluster *taskCl = 0;
6408fe42 485 if(iPWG4Cluster&1){
486 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"KT");
6408fe42 487 }
d2e6cdd5 488 if(iPWG4Cluster&2){
489 UInt_t selection = 0;
490 if(!iAODanalysis) selection = 0xffffff;
491 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
6408fe42 492 AddTaskJetClusterDelta(kHighPtFilterMask,kUseAODMC,iPhysicsSelection,"KT",selection);
0971dabc 493 }
494 if(iPWG4Cluster&4){
495 UInt_t selection = 0;
496 if(!iAODanalysis) selection = 0xffffff;
497 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
58ef946c 498 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"ANTIKT");
499 AddTaskJetClusterDelta(kHighPtFilterMask,kUseAODMC,iPhysicsSelection,"ANTIKT",selection);
d2e6cdd5 500 }
0971dabc 501
502
d2e6cdd5 503 if (!taskCl) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCluster cannot run for this train conditions - EXCLUDED");
504
505 }
c38e3b95 506 if(iPWG4PartCorr){
507 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPartCorr.C");
14526afb 508 AliAnalysisTaskParticleCorrelation *taskpartcorrPHOS = AddTaskPartCorr("AOD", "PHOS",kFALSE,kIsMC);
c38e3b95 509 if (!taskpartcorrPHOS) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation PHOS cannot run for this train conditions - EXCLUDED");
14526afb 510 AliAnalysisTaskParticleCorrelation *taskpartcorrEMCAL = AddTaskPartCorr("AOD", "EMCAL",kFALSE,kIsMC);
c38e3b95 511 if (!taskpartcorrEMCAL) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation EMCAL cannot run for this train conditions - EXCLUDED");
512 if(kDeltaAODPartCorrName.Length()>0)mgr->RegisterExtraFile(kDeltaAODPartCorrName.Data()); // hmm this is written anyway.... but at least we do not register it...
121e4bd5 513 }
514
d2e6cdd5 515 if(iPWG4CaloQA){
516 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/QA/AddTaskCalorimeterQA.C");
f4d11ac8 517 AliAnalysisTaskParticleCorrelation *taskcaloQA = AddTaskCalorimeterQA("ESD",kFALSE,kIsMC);
d2e6cdd5 518 if(!taskcaloQA)::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation QA cannot run - EXCLUDED");
519 }
520
d2e6cdd5 521 if(iPWG4JetCorr){
522 // using namespace JetCorrelHD;
d3af0232 523 TString cdir = gSystem->WorkingDirectory();
524 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
d2e6cdd5 525 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCorrel.C");
526 AliAnalysisTaskJetCorrel *taskjetcorr = AddTaskJetCorrel();
d3af0232 527 gSystem->ChangeDirectory(cdir);
c166d299 528 if (!taskjetcorr) ::Warning("AnalysisTrainNew", "AliAnalysisTaskJetCorrel cannot run for this train conditions - EXCLUDED");
d2e6cdd5 529 }
530
911a740f 531 if(iPWG4Tagged){
532 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskTaggedPhotons.C");
533 AliAnalysisTaskTaggedPhotons * taskTagged = AddTaskTaggedPhotons(kFALSE); // EMCAL
58ef946c 534 taskTagged = AddTaskTaggedPhotons(kTRUE); // PHOS
911a740f 535 if (!taskTagged) ::Warning("AnalysisTrainNew", "AliAnalysisTaskTaggedPhotons cannot run for this train conditions - EXCLUDED");
536 }
121e4bd5 537 if (iPWG4omega3pi) {
538 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskomega3pi.C");
539 AliAnalysisTaskOmegaPi0PiPi *taskomega3pi = AddTaskomega3pi();
540 if (!taskomega3pi) ::Warning("AnalysisTrainNew", "AliAnalysisTaskomega3pi cannot run\
541 for these train conditions - EXCLUDED");
542 }
543
53c63663 544 // PWG4 gamma conversion analysis
545 if (iPWG4GammaConv) {
546 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskGammaConversion.C");
547 TString cdir = gSystem->WorkingDirectory();
548 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
549 // TString gcArguments = "-run-on-train -run-jet -run-chic -run-neutralmeson -run-cf";
58ef946c 550 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
551 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
82ebd295 552 TString gcArguments = "-run-on-train -run-jet -run-omega-meson -run-neutralmeson";
553 TString kGCAnalysisCutSelectionId="9002111000";
554 gcArguments.Append(Form("-set-cut-selection %s ",kGCAnalysisCutSelectionId.Data()));
53c63663 555 if(!kIsMC)gcArguments += " -mc-off";
556 AliAnalysisTaskGammaConversion * taskGammaConversion = AddTaskGammaConversion(gcArguments,mgr->GetCommonInputContainer());
557 gSystem->ChangeDirectory(cdir);
121e4bd5 558 taskGammaConversion->SelectCollisionCandidates();
53c63663 559 if (!taskGammaConversion) ::Warning("AnalysisTrainNew", "AliAnalysisTaskGammaConversion cannot run for these train conditions - EXCLUDED");
560 }
561
3878a941 562
c38e3b95 563 //==========================================================================
564 // FOR THE REST OF THE TASKS THE MACRO AddTaskXXX() is not yet implemented/
565 // Run the analysis
566 //
567 if (kPluginUse) {
568 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
569 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
570 }
571
572 if (mgr->InitAnalysis()) {
573 mgr->PrintStatus();
574 // if (kSaveTrain || strlen(config_file)) gSystem->ChangeDirectory(kTrainName);
e84da0a5 575 if (!strcmp(plugin_mode,"submit")&&smode=="GRID"){
c38e3b95 576 TString alien_workdir = gGrid->GetHomeDirectory();
577 if (iAODanalysis) alien_workdir += "analysisAOD";
578 else alien_workdir += "analysisESD";
3878a941 579 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
c38e3b95 580 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
e84da0a5 581 printf("=== AnalysisTrainPWG4Jets:: Registering jdl in the work directory alien://%s/%s, should be done by the manager! ===\n",
c38e3b95 582 alien_workdir.Data(),gridhandler->GetGridOutputDir());
58ef946c 583
584 TString dest;
585 dest = Form("%s/%s/%s.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
586 if(AliAnalysisAlien::FileExists(dest.Data())){
587 // Printf("%s exist on grid removing...",dest.Data());
588 // gGrid->Rm(dest.Data());
589 }
590 TFile::Cp(Form("file:%s.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
591
73b7619a 592 dest = Form("%s/rootfiles/STEER/LQ1dRef_v1.root",gGrid->GetHomeDirectory());
58ef946c 593 if(AliAnalysisAlien::FileExists(dest.Data())){
594 Printf("%s exist on grid removing...",dest.Data());
595 gGrid->Rm(dest.Data());
596 }
597 TFile::Cp(Form("file:%s/STEER/LQ1dRef_v1.root",
598 gSystem->ExpandPathName("$ALICE_ROOT")),
599 Form("alien://%s",dest.Data()));
c38e3b95 600 }
3878a941 601 AliLog::SetGlobalLogLevel(AliLog::kError);
c166d299 602 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
603 TFile * fM = TFile::Open("manager_local.root","RECREATE");
604 mgr->Write();
605 fM->Close();
606 }
607
c38e3b95 608 StartAnalysis(smode, chain);
c166d299 609
4a6f59cb 610 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
611 for(int i = 0;i < mgr->GetTopTasks()->GetEntries();i++){
612 mgr->ProfileTask(i);
613 }
614 }
c38e3b95 615 if (!strcmp(plugin_mode, "offline")&&smode=="GRID"){
e84da0a5 616 // Offline mode path files
617 // PatchJDL();
618 PatchAnalysisMacro();
619 }
c38e3b95 620
e84da0a5 621 if (kSaveTrain && smode=="GRID") {
622 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
623 TString alien_workdir = gGrid->GetHomeDirectory();
624 if (iAODanalysis) alien_workdir += "analysisAOD";
3878a941 625 else alien_workdir += "analysisESD";
626 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
e84da0a5 627 // kGridOutdir = gridhandler->GetGridOutputDir();
628 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
c38e3b95 629 alien_workdir.Data());
e84da0a5 630 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data())))
631 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
632 if (strcmp(plugin_mode, "test"))
633 TFile::Cp(Form("file:%sConfig.C",kTrainName.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
634 }
635 }
c38e3b95 636}
637
638//______________________________________________________________________________
639void StartAnalysis(const char *mode, TChain *chain) {
640// Start analysis.
641 Int_t imode = -1;
642 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
643 if (!strcmp(mode, "LOCAL")) imode = 0;
644 if (!strcmp(mode, "PROOF")) imode = 1;
645 if (!strcmp(mode, "GRID")) imode = 2;
646 switch (imode) {
647 case 0:
648 if (!chain) {
649 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
650 return;
651 }
82ebd295 652 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
c38e3b95 653 return;
654 case 1:
655 if (!kProofDataSet.Length()) {
656 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "kProofDataSet is empty");
657 return;
658 }
659 mgr->StartAnalysis(mode, kProofDataSet, kProofEvents,kProofOffset);
660 return;
661 case 2:
662 if (kPluginUse) {
663 if (!mgr->GetGridHandler()) {
664 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Grid plugin not initialized");
665 return;
666 }
667 mgr->StartAnalysis("grid");
668 } else {
669 if (!chain) {
670 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
671 return;
672 }
673 mgr->StartAnalysis(mode, chain);
674 }
675 return;
676 }
677}
678
679//______________________________________________________________________________
680void CheckModuleFlags(const char *mode) {
681// Checks selected modules and insure compatibility
682 Int_t imode = -1;
683 if (!strcmp(mode, "LOCAL")) imode = 0;
684 if (!strcmp(mode, "PROOF")) imode = 1;
685 if (!strcmp(mode, "GRID")) imode = 2;
686
687
e84da0a5 688 if (kUseCPAR) {
689 kPluginAliRootVersion = ""; // NO aliroot if we use CPAR
690 }
c38e3b95 691
692 if (imode==1) {
693 if (!kUsePAR) {
694 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
695 kUsePAR = kTRUE;
696 }
697 }
698 if (imode != 2) {
699 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
700 kPluginUse = kFALSE;
701 }
702
703
704 if(!kIsMC){
705 // switch off anthin related to MC
706 kUseMC = 0;
707 kUseAODMC = 0;
708 kUseTR = kFALSE;
709 }
710
711 if (iAODanalysis) {
712 // AOD analysis
713 if (kUseMC)
714 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
715 if (kUseAODTags)
716 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
717 kUseMC = kFALSE;
718 kUseTR = kFALSE;
719 kUseAODTags = kFALSE;
720 if (iESDfilter)
721 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
722 iESDfilter = 0;
e84da0a5 723 if (iPhysicsSelection)
724 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "Physics Selection disabled in analysis on AOD's");
725 iPhysicsSelection = 0;
c38e3b95 726 if (!iAODhandler) {
727 if (iJETAN)
728 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
729 iJETAN = 0;
730 iDIJETAN = 0;
731 }
732 // Disable tasks that do not work yet on AOD data
58ef946c 733 if(iPWG4JCORRAN)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 JCORRAN disabled in analysis on AOD's");
4d62ae1a 734 iPWG4JCORRAN = 0;
c38e3b95 735 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
736 iPWG4PtQAMC = 0;
737 if( iPWG4PtQATPC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtTPC disabled in analysis on AOD's");
738 iPWG4PtQATPC = 0;
739 if( iPWG4PtSpectra)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
740 iPWG4PtSpectra = 0;
b53f2e4f 741 if(iPWG4KMeans)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4KMeans disabled on AOD's");
742 iPWG4KMeans = 0;
d2e6cdd5 743 if (iPWG4JetCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4Jetcorr disabled on AOD's");
744 iPWG4JetCorr = 0;
c38e3b95 745 if (iPWG4PartCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
746 iPWG4PartCorr = 0;
d2e6cdd5 747 if (iPWG4CaloQA)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4CaloQA disabled on AOD's");
748 iPWG4CaloQA = 0;
911a740f 749 if (iPWG4Tagged)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4tagged disabled on AOD's");
750 iPWG4Tagged = 0;
121e4bd5 751 if (iPWG4omega3pi)
752 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
753 iPWG4omega3pi = 0;
c38e3b95 754 if(iPWG1QASym)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG1 QA Sym disabled in analysis on AOD's");
53c63663 755 if (iPWG4GammaConv)::Info("AnalysisPWG4Jets.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's");
756 iPWG4GammaConv = 0;
c38e3b95 757 iPWG1QASym = 0;
758 } else {
759 // ESD analysis
760 if (!kUseMC){
761 kUseTR = kFALSE;
762
763 if(kUseKinefilter)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Kine Filter disabled in analysis without MC");
764 kUseKinefilter = kFALSE;
765 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis without MC");
766 iPWG4PtQAMC = 0;
767
768 }
769 if (!kUseTR) {
c166d299 770 if(iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "iPWG4QATPCMC disabled if not reading track references");
b03b08a3 771 iPWG4PtQAMC = 0;
c38e3b95 772 }
e84da0a5 773 if (iJETAN){
774 iESDfilter=1;
775 }
c38e3b95 776 if (!iESDfilter){
777 kUseKinefilter = kFALSE;
778 kUseMuonfilter = kFALSE;
779 }
780 if(!iJETAN){
781 iPWG4JetSpectrum = iPWG4UE = iPWG4ThreeJets = iDIJETAN = 0;
782 }
783 }
9f77f0ce 784 iPWG4JetTasks = iPWG4JetServices||iPWG4JetSpectrum||iPWG4UE||iPWG4PtQAMC||iPWG4PtSpectra||iPWG4PtQATPC||iPWG4ThreeJets||iPWG4JetChem;
d2e6cdd5 785 iPWG4PartCorrLibs = iPWG4PartCorr||iPWG4Tagged||iPWG4CaloQA;
e6993a52 786 iJETANLib = iPWG4JetTasks||iJETAN||iDIJETAN;
c38e3b95 787 if (iESDfilter) {iAODhandler=1;}
788 if (kUseKinefilter && !kUseMC) kUseKinefilter = kFALSE;
789 if (kUseAODTags && !iAODhandler) kUseAODTags = kFALSE;
790
791
792
793}
794
795//______________________________________________________________________________
796Bool_t Connect(const char *mode) {
797// Connect <username> to the back-end system.
798 Int_t imode = -1;
799 if (!strcmp(mode, "LOCAL")) imode = 0;
800 if (!strcmp(mode, "PROOF")) imode = 1;
801 if (!strcmp(mode, "GRID")) imode = 2;
802 TString username = gSystem->Getenv("alien_API_USER");
803 switch (imode) {
804 case 0:
805 break;
806 case 1:
807 if (!username.Length()) {
808 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
809 1. Have called: alien-token-init <username>\n \
810 2. Have called: >source /tmp/gclient_env_$UID");
811 return kFALSE;
812 }
813 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
814 username.Data(), kProofCluster.Data());
815 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
816// TProof::Open(Form("%s@%s:31093", username.Data(), kProofCluster.Data()));
817 TProof::Open(Form("%s@%s", username.Data(), kProofCluster.Data()));
818 if (!gProof) {
819 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
820 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
821 return kFALSE;
822 }
823 if(kProofClearPackages)gProof->ClearPackages();
824
825 if(kProofSaveToAlien){
826 TGrid::Connect("alien://");
827 if (gGrid) {
828 TString homedir = gGrid->GetHomeDirectory();
829 TString workdir = homedir + kTrainName;
830 if (!gGrid->Cd(workdir)) {
831 gGrid->Cd(homedir);
832 if (gGrid->Mkdir(workdir)) {
833 gGrid->Cd(kTrainName);
834 ::Info("AnalysisTrainPWG4Jets::Connect()", "Directory %s created", gGrid->Pwd());
835 }
836 }
837 gGrid->Mkdir("proof_output");
838 gGrid->Cd("proof_output");
839 kProofOutdir = Form("alien://%s", gGrid->Pwd());
840 }
841 }
842 break;
843 case 2:
844 if (!username.Length()) {
845 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
846 1. Have called: alien-token-init <username>\n \
847 2. Have called: >source /tmp/gclient_env_$UID");
848 return kFALSE;
849 }
850 if (kPluginUse && !gSystem->Getenv("alien_CLOSE_SE")) {
851 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode),
852 "When using the AliEn plugin it is preferable to define the \
853 variable alien_CLOSE_SE in your environment.");
854 return kFALSE;
855 }
856 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to AliEn ...",
857 username.Data());
858 TGrid::Connect("alien://");
859 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
860 break;
861 default:
862 ::Error("AnalysisTrainPWG4Jets.C::Connect", "Unknown run mode: %s", mode);
863 return kFALSE;
864 }
865 ::Info("AnalysisTrainPWG4Jets.C::Connect","Connected in %s mode", mode);
866 return kTRUE;
867}
868
869//______________________________________________________________________________
870Bool_t LoadCommonLibraries(const char *mode)
871{
872// Load common analysis libraries.
873 Int_t imode = -1;
874 if (!strcmp(mode, "LOCAL")) imode = 0;
875 if (!strcmp(mode, "PROOF")) imode = 1;
876 if (!strcmp(mode, "GRID")) imode = 2;
877 if (!gSystem->Getenv("ALICE_ROOT")) {
878 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Analysis train requires that analysis libraries are compiled with a local AliRoot");
879 return kFALSE;
880 }
881 Bool_t success = kTRUE;
882 // ROOT libraries
883 gSystem->Load("libTree.so");
884 gSystem->Load("libGeom.so");
885 gSystem->Load("libVMC.so");
886 gSystem->Load("libPhysics.so");
887
888 // Load framework classes. Par option ignored here.
889 switch (imode) {
890 case 0:
891 case 2:
892 if (kUseCPAR) {
893 success &= LoadLibrary("STEERBase", mode, kTRUE);
894 success &= LoadLibrary("ESD", mode, kTRUE);
895 success &= LoadLibrary("AOD", mode, kTRUE);
896 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
897 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
898 success &= LoadLibrary("CORRFW", mode, kTRUE);
899 } else {
900 success &= LoadLibrary("libSTEERBase.so", mode);
901 success &= LoadLibrary("libESD.so", mode);
902 success &= LoadLibrary("libAOD.so", mode);
903 success &= LoadLibrary("libANALYSIS.so", mode);
904 success &= LoadLibrary("libANALYSISalice.so", mode);
905 success &= LoadLibrary("libCORRFW.so", mode);
906 gROOT->ProcessLine(".include $ALICE_ROOT/include");
907 }
908 break;
909 case 1:
910 Int_t ires = -1;
911 if (kProofUseAFPAR && !gSystem->AccessPathName(kProofAFversion)) ires = gProof->UploadPackage(kProofAFversion);
912 if (ires < 0) {
913 success &= LoadLibrary("STEERBase", mode);
914 success &= LoadLibrary("ESD", mode);
915 success &= LoadLibrary("AOD", mode);
916 success &= LoadLibrary("ANALYSIS", mode);
917 success &= LoadLibrary("ANALYSISalice", mode);
918 success &= LoadLibrary("CORRFW", mode);
919 } else {
920 ires = gProof->EnablePackage(kProofAFversion);
921 if (ires<0) success = kFALSE;
922 success &= LoadLibrary("CORRFW", mode);
923 }
924 break;
925 default:
926 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
927 return kFALSE;
928 }
929 if (success) {
930 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
931 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
932 gSystem->GetIncludePath());
933 } else {
934 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: FAILED");
935 }
936
937 return success;
938}
939
940//______________________________________________________________________________
941Bool_t LoadAnalysisLibraries(const char *mode)
942{
943// Load common analysis libraries.
944 Bool_t success = kTRUE;
945 if (iESDfilter) {
946 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
947 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
948 }
949 // JETAN
e6993a52 950 if (iJETANLib) {
b53f2e4f 951 // this part needs some rework in case we do not need the fastjed finders for processing
952 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
c38e3b95 953 if (!strcmp(mode, "PROOF")){
ef1e462f 954 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libCGAL.so\"\)", kTRUE);
c38e3b95 955 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libfastjet.so\"\)", kTRUE);
956 // problem when loading siscone copiled with different gcc version??
957 // gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libsiscone.so\"\)", kTRUE);
958 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libSISConePlugin.so\"\)", kTRUE);
959 }
b53f2e4f 960 if(!kUsePAR){
e84da0a5 961 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
962 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
963 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
964 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
965 }
966 else{
967 // par files plus FASTJET needs some extra work... need to change
968 // the loading sequence in the auto generated .C file
969 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
970 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
971 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
972 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
973 }
c38e3b95 974 if (!LoadLibrary("FASTJETAN", mode, kTRUE)) return kFALSE;
975 }
976 if(iPWG4JetTasks){
c38e3b95 977 if (!LoadLibrary("PWG4JetTasks", mode, kTRUE)) return kFALSE;
978 }
58ef946c 979 if(iPWG4JCORRAN){
980 // PWG4 particle correlations
981 if(!LoadLibrary("PWG4JCORRAN",mode,kTRUE))return kFALSE;
982 }
983
c38e3b95 984 if(iPWG1QASym){
99bfd7f7 985 if (!LoadSource(Form("%s/PWG1/AliAnalysisTaskQASym.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
c38e3b95 986 }
121e4bd5 987 if(iPWG4TmpSourceSara){
c166d299 988 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
121e4bd5 989 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskEta.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
990 }
c166d299 991 if(iPWG4TmpSourceFrag){
992 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
993 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskFragFunc.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
994 }
9f77f0ce 995
58ef946c 996
9f77f0ce 997 /*
998 if(iPWG4JetChem){
c580ebbb 999 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
1000 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskJetChem.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1001 }
9f77f0ce 1002 */
c166d299 1003
911a740f 1004 if (iPWG4PartCorrLibs) {
c38e3b95 1005 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
1006 !LoadLibrary("PHOSUtils", mode, kTRUE) ||
1007 !LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
1008 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
1009 }
d2e6cdd5 1010 if (iPWG4JetCorr) {
1011 if (!LoadLibrary("PWG4JetCorrel", mode, kTRUE)) return kFALSE;
1012 }
121e4bd5 1013 if (iPWG4omega3pi) {
1014 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
1015 }
53c63663 1016 if (iPWG4GammaConv) {
1017 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
1018 }
c38e3b95 1019
1020 ::Info("AnalysisTrainPWG4Jets.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
1021 return kTRUE;
1022}
1023
1024//______________________________________________________________________________
1025Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
1026{
1027// Load a module library in a given mode. Reports success.
1028 Int_t imode = -1;
1029 Int_t result;
1030 TString smodule(module);
1031 if (!strcmp(mode, "LOCAL")) imode = 0;
1032 if (!strcmp(mode, "PROOF")) imode = 1;
1033 if (!strcmp(mode, "GRID")) imode = 2;
1034 TString mod(module);
1035 if (!mod.Length()) {
1036 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Empty module name");
1037 return kFALSE;
1038 }
1039 // If a library is specified, just load it
1040 if (smodule.EndsWith(".so")) {
1041 mod.Remove(mod.Index(".so"));
1042 result = gSystem->Load(mod);
1043 if (result < 0) {
1044 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load library %s", module);
1045 return kFALSE;
1046 }
1047 if (rec) anaLibs += Form("%s.so ",mod.Data());
e84da0a5 1048 if (rec) anaLibsExtra += Form("%s.so ",mod.Data());
c38e3b95 1049 return kTRUE;
1050 }
1051 // Check if the library is already loaded
1052 if (strlen(gSystem->GetLibraries(Form("%s.so", module), "", kFALSE)) > 0)
1053 return kTRUE;
1054 switch (imode) {
1055 case 0:
1056 case 2:
1057 if (kUsePAR) {
1058 result = SetupPar(module);
1059 if (rec) anaPars += Form("%s.par ", module);
1060 } else {
1061 result = gSystem->Load(Form("lib%s.so", module));
1062 if (rec) anaLibs += Form("lib%s.so ", module);
1063 }
1064 break;
1065 case 1:
1066 if(!gSystem->AccessPathName(module)){
1067 ::Info("AnalysisTrainPWG4Jets.C::LoadLibrary", "Removing directory %s",module);
1068 gSystem->Exec(Form("rm -rf %s",module));
1069 }
1070 result = gProof->UploadPackage(module);
1071 if (result<0) {
1072 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
1073 if (result<0) {
1074 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
1075 return kFALSE;
1076 }
1077 }
1078 result = gProof->EnablePackage(module);
1079 break;
1080 default:
1081 return kFALSE;
1082 }
1083 if (result < 0) {
1084 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load module %s", module);
1085 return kFALSE;
1086 }
1087 return kTRUE;
1088}
1089
1090
1091
1092//______________________________________________________________________________
1093Bool_t LoadSource(const char *source, const char *mode, Bool_t rec=kFALSE)
1094{
1095// Load a module library in a given mode. Reports success.
1096 Int_t imode = -1;
1097 Int_t result = -1;
1098 if (!strcmp(mode, "LOCAL")) imode = 0;
1099 if (!strcmp(mode, "PROOF")) imode = 1;
1100 if (!strcmp(mode, "GRID")) imode = 2;
1101 TString ssource(source);
1102 TString basename = gSystem->BaseName(ssource.Data());
1103 if (!ssource.Length()) {
1104 ::Error("AnalysisTrainPWG4Jets.C::LoadSource", "Empty task name");
1105 return kFALSE;
1106 }
4d62ae1a 1107 // we have a source code so compile it
c38e3b95 1108 if (ssource.EndsWith(".cxx")) {
1109 // need to copy it here other wise the path is also used on grid...
1110 ssource.Remove(ssource.Index(".cxx"));
1111 basename.Remove(basename.Index(".cxx"));
1112 Printf("LoadSources:: Copying... path %s{cxx,h}",ssource.Data());
1113 gSystem->Exec(Form("cp %s.cxx . ",ssource.Data()));
1114 gSystem->Exec(Form("cp %s.h . ",ssource.Data()));
1115 // Path to code
1116 // only needed for local compilation, in grid and proof mode
1117 // the task headers are uploaded
1118 // path.Remove(path.Index(gSystem->BaseName(path.Data())));
1119 // Printf("LoadSources:: Including path %s",path.Data());
1120 // if(path.Length()>0)gROOT->ProcessLine(Form(".include %s",path.Data()));
1121 Printf("LoadSources:: Loading... path %s",basename.Data());
1122 switch (imode) {
1123 case 0:
b53f2e4f 1124 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1125 break;
1126 case 1:
b53f2e4f 1127 result = gProof->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1128 break;
1129 case 2:
b53f2e4f 1130 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1131 if (rec){
1132 // what we want to compile
1133 anaSources += Form("%s.cxx ",basename.Data());
1134 // what we need as input...
1135 anaLibs += Form("%s.cxx %s.h ",basename.Data(),basename.Data());
1136 }
1137 break;
1138 default:
1139 return kFALSE;
1140 }
1141 }
1142 if (result < 0) {
1143 ::Error("AnalysisTrainPWG4Jets.C::LoadSources", "Could not load source %s", source);
1144 return kFALSE;
1145 }
1146 return kTRUE;
1147}
1148
1149
1150//______________________________________________________________________________
1151TChain *CreateChain(const char *mode, const char *plugin_mode)
1152{
1153// Create the input chain
1154 Int_t imode = -1;
1155 if (!strcmp(mode, "LOCAL")) imode = 0;
1156 if (!strcmp(mode, "PROOF")) imode = 1;
1157 if (!strcmp(mode, "GRID")) imode = 2;
1158 TChain *chain = NULL;
1159 // Local chain
1160 switch (imode) {
1161 case 0:
1162 if (iAODanalysis) {
1163 if (!kLocalXMLDataset.Length()) {
1164 // Local AOD
1165 chain = new TChain("aodTree");
1166 TString line;
1167 ifstream in;
1168 in.open(kLocalDataList.Data());
1169 while (in.good()) {
1170 in >> line;
1171 if (line.Length() == 0) continue;
1172 // cout << " line = " << line << endl;
1173 chain->Add(line.Data());
1174 }
1175 } else {
1176 // Interactive AOD
1177 chain = CreateChainSingle(kLocalXMLDataset, "aodTree");
1178 }
1179 } else {
1180 if (!kLocalXMLDataset.Length()) {
1181 // Local ESD
1182 chain = new TChain("esdTree");
1183 TString line;
1184 ifstream in;
1185 in.open(kLocalDataList.Data());
1186 while (in.good()) {
1187 in >> line;
1188 if (line.Length() == 0) continue;
1189 cout << " line = " << line << endl;
1190 chain->Add(line.Data());
1191 }
1192 } else {
1193 // Interactive ESD
1194 chain = CreateChainSingle(kLocalXMLDataset, "esdTree");
1195 }
1196 }
1197 break;
1198 case 1:
1199 break;
1200 case 2:
1201 if (kPluginUse) {
1202// AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1203// AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1204 } else {
1205 TString treeName = "esdTree";
1206 if (iAODanalysis) treeName = "aodTree";
1207 chain = CreateChainSingle("wn.xml", treeName);
1208 }
1209 break;
1210 default:
1211 }
1212 if (chain && chain->GetNtrees()) return chain;
1213 return NULL;
1214}
1215
1216//______________________________________________________________________________
1217TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
1218{
1219 printf("*******************************\n");
1220 printf("*** Getting the ESD Chain ***\n");
1221 printf("*******************************\n");
1222 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
1223
1224 if (!myCollection) {
1225 ::Error("AnalysisTrainPWG4Jets.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
1226 return NULL ;
1227 }
1228
1229 TChain* chain = new TChain(treeName);
1230 myCollection->Reset() ;
1231 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
1232 chain->ls();
1233 return chain;
1234}
1235
1236//______________________________________________________________________________
1237Int_t SetupPar(char* pararchivename)
1238{
1239 if (!pararchivename || !strlen(pararchivename)) return -1;
1240 char processline[1024];
1241 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
1242 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
1243 ::Info("AnalysisTrainPWG4Jets.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
1244 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
1245 Form("%s.par",pararchivename));
1246 } else {
1247 ::Error("AnalysisTrainPWG4Jets.C::SetupPar", "Cannot find %s.par", pararchivename);
1248 return -1;
1249 }
1250 }
1251 if (kPluginUse && kSaveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, kTrainName.Data()));
1252 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
1253
1254 TString ocwd = gSystem->WorkingDirectory();
1255 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
1256
1257 // check for BUILD.sh and execute
1258 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
1259 printf("*******************************\n");
1260 printf("*** Building PAR archive ***\n");
1261 printf("*******************************\n");
1262 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
1263 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
1264 return -1;
1265 }
1266 }
1267
1268 // check for SETUP.C and execute
1269 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
1270 printf("*******************************\n");
1271 printf("*** Setup PAR archive ***\n");
1272 printf("*******************************\n");
1273 gROOT->Macro("PROOF-INF/SETUP.C");
1274 }
1275 if (!gSystem->ChangeDirectory(ocwd.Data())) return -1;
1276 return 0;
1277}
1278
1279//______________________________________________________________________________
1280AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
1281{
1282// Check if user has a valid token, otherwise make one. This has limitations.
1283// One can always follow the standard procedure of calling alien-token-init then
1284// source /tmp/gclient_env_$UID in the current shell.
1285 if (!AliAnalysisGrid::CreateToken()) return NULL;
1286 AliAnalysisAlien *plugin = new AliAnalysisAlien();
1287// Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
1288 plugin->SetRunMode(plugin_mode);
1289 if (kPluginUseProductionMode) plugin->SetProductionMode();
1290 plugin->SetJobTag(kJobTag);
1291 plugin->SetNtestFiles(2);
1292// plugin->SetPreferedSE("ALICE::NIHAM::File");
1293// Set versions of used packages
e84da0a5 1294 plugin->SetAPIVersion("V1.1x");
1295 // plugin->SetAPIVersion("V1.0x");
1296// plugin->SetAPIVersion("V2.4");
c38e3b95 1297 plugin->SetROOTVersion(kPluginRootVersion);
1298 plugin->SetAliROOTVersion(kPluginAliRootVersion);
1299// Declare input data to be processed.
1300// Method 1: Create automatically XML collections using alien 'find' command.
1301// Define production directory LFN
1302 plugin->SetGridDataDir(kGridDatadir.Data());
1303// Set data search pattern
1304 if (iAODanalysis) plugin->SetDataPattern(" *AliAOD.root");
1305 else plugin->SetDataPattern(Form(" %s/*/*ESD.tag.root",kGridPassPattern.Data()));
1306// ...then add run numbers to be considered
1307// plugin->SetRunRange(kGridRunRange[0], kGridRunRange[1]);
1308 for (Int_t i=kGridRunRange[0]; i<=kGridRunRange[1]; i++) {
1309 Printf("AnalysisTrainPWG4Jets Adding run number %s", Form(kGridRunPattern.Data(),i));
1310 plugin->AddRunNumber(Form(kGridRunPattern.Data(),i));
1311 }
1312
1313 if(kGridLocalRunList.Length()>0){
1314 ifstream in1;
1315 in1.open(kGridLocalRunList.Data());
1316 int iRun;
9a5c5b1e 1317
1318 /*
e84da0a5 1319 char c;
1320 char cLine[250];
1321 while(!in1.eof()){
1322 c = in1.get();
1323 if ( (c >= '0') && (c <= '9') )
1324 {
1325 in1.putback (c);
1326 in1>>iRun;
1327 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1328 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1329 }
1330 else
1331 {
1332 in1.putback (c);
1333 in1.getline(cLine,250);
9a5c5b1e 1334
1335 }
1336 }
1337 */
1338
1339 // just use run numbers, negatives will be excluded
1340 while(in1>>iRun){
1341 if(iRun>0){
1342 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1343 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1344 }
1345 else{
1346 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d", iRun);
e84da0a5 1347 }
c38e3b95 1348 }
1349 }
1350
1351// Method 2: Declare existing data files (raw collections, xml collections, root file)
1352// If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
1353// XML collections added via this method can be combined with the first method if
1354// the content is compatible (using or not tags)
1355// plugin->AddDataFile("tag.xml");
1356// plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
1357// Define alien work directory where all files will be copied. Relative to alien $HOME.
3878a941 1358 TString alien_workdir = "";
1359
1360 if (iAODanalysis) alien_workdir += "analysisAOD";
1361 else alien_workdir += "analysisESD";
1362 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1363 plugin->SetGridWorkingDir(alien_workdir.Data());
1364
c38e3b95 1365 // Declare alien output directory. Relative to working directory.
1366 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1367 plugin->SetGridOutputDir(kGridOutdir);
1368
1369 // Add external packages
1370 if (iJETAN||iDIJETAN) {
1371 plugin->AddExternalPackage("boost::v1_38_0");
1372 plugin->AddExternalPackage("cgal::v3.3.1");
1373 plugin->AddExternalPackage("fastjet::v2.4.0");
1374 }
1375
1376
1377 // set extra libs before par file compilation
1378 anaLibs += kGridExtraFiles;
1379 anaLibs = anaLibs.Strip();
e84da0a5 1380 Printf("anaLibs %s",anaLibs.Data());
1381 Printf("anaLibsExtra %s",anaLibsExtra.Data());
1382
1383 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs.Data());
1384 if (anaLibsExtra.Length()) plugin->SetAdditionalRootLibs(anaLibsExtra.Data());
c38e3b95 1385
1386 TString ana_sources = "";
1387 TString ana_add = "";
1388 if (kUsePAR && anaPars.Length()) {
1389 printf("%s\n", anaPars.Data());
1390 TObjArray *arr;
1391 TObjString *objstr;
1392 arr = anaPars.Tokenize(" ");
1393 TIter next(arr);
1394 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
1395 delete arr;
1396 }
1397
1398// Declare the analysis source files names separated by blancs. To be compiled runtime
1399// using ACLiC on the worker nodes.
1400 ana_sources = anaSources.Strip();
1401// Declare all libraries (other than the default ones for the framework. These will be
1402// loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
1403
1404 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
1405 plugin->SetExecutableCommand(kPluginExecutableCommand.Data());
1406// Declare the output file names separated by blancs.
1407// (can be like: file.root or file.root@ALICE::Niham::File)
1408 plugin->SetDefaultOutputs();
1409 plugin->SetMergeExcludes(kGridMergeExclude);
1410 plugin->SetMaxMergeFiles(kGridMaxMergeFiles);
1411 plugin->SetNrunsPerMaster(kGridRunsPerMaster);
9a5c5b1e 1412 plugin->SetMergeViaJDL(kPluginMergeViaJDL);
1413// Use fastread option
1414 plugin->SetFastReadOption(kPluginFastReadOption);
1415// UseOverwrite mode
1416 plugin->SetOverwriteMode(kPluginOverwriteMode);
c38e3b95 1417// Optionally define the files to be archived.
1418// plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
dc6a7461 1419 plugin->SetOutputToRunNo(kPluginOutputToRunNumber); // write the output to subdirs named after run number
c38e3b95 1420
1421 // Put default output files to archive
1422 TString listhists = "";
1423 TString listaods = "";
1424 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1425 TIter next(mgr->GetOutputs());
1426 AliAnalysisDataContainer *output;
1427 while ((output=(AliAnalysisDataContainer*)next())) {
1428 const char *filename = output->GetFileName();
1429 if (!(strcmp(filename, "default"))) {
53c63663 1430 if (!mgr->GetOutputEventHandler()) continue;
c38e3b95 1431 filename = mgr->GetOutputEventHandler()->GetOutputFileName();
e84da0a5 1432 if (listaods.Length()) listaods += " ";
c38e3b95 1433 listaods += filename;
c38e3b95 1434 } else {
e84da0a5 1435 if(!listhists.Contains(filename)){
1436 if (listhists.Length()) listhists += " ";
c38e3b95 1437 listhists += filename;
1438 }
1439 }
1440 }
53c63663 1441
c28abe00 1442 if(kUseSysInfo>0){
e84da0a5 1443 if (listhists.Length()) listhists += " ";
c28abe00 1444 listhists += "syswatch.root";
53c63663 1445 }
1446
e84da0a5 1447 if(kIsMC){
1448 if (listaods.Length()) listaods += " ";
1449 listaods += "pyxsec_hists.root";
1450 }
1451
1452
53c63663 1453 if (mgr->GetExtraFiles().Length()) {
e84da0a5 1454 if (listaods.Length()) listaods += " ";
53c63663 1455 listaods += mgr->GetExtraFiles();
c38e3b95 1456 }
53c63663 1457
1458 // if we do not fill the aod we do not need to store it
e84da0a5 1459 kGridMergeExclude = listaods;
1460
1461 if(!kFillAOD){
1462 listaods="";
1463 plugin->SetDefaultOutputs(kFALSE);
1464 plugin->SetOutputFiles(listhists.Data());
1465 }
53c63663 1466
e84da0a5 1467
1468 listaods.ReplaceAll(" ", ",");
1469 listhists.ReplaceAll(" ", ",");
c38e3b95 1470 if (listhists.Length()) listhists = Form("hist_archive.zip:%s@%s", listhists.Data(), kGridOutputStorages.Data());;
1471 if (listaods.Length()) listaods = Form("aod_archive.zip:%s@%s", listaods.Data(), kGridOutputStorages.Data());;
53c63663 1472
c38e3b95 1473 if (!listhists.Length() && !listaods.Length()) {
1474 ::Fatal("AnalysisTrainPWG4Jets", "No task output !");
1475 }
53c63663 1476
e84da0a5 1477
53c63663 1478
58ef946c 1479 TString outputArchive = "log_archive.zip:stdout,stderr@disk=2";
1480 if(kUseSysInfo>0)outputArchive = "log_archive.zip:stdout,stderr,syswatch.log@disk=2";
c38e3b95 1481 if (listaods.Length()) {
1482 outputArchive += " ";
1483 outputArchive += listaods;
1484 }
1485 if (listhists.Length()) {
1486 outputArchive += " ";
1487 outputArchive += listhists;
1488 }
1489 plugin->SetOutputArchive(outputArchive);
1490// Optionally set a name for the generated analysis macro (default MyAnalysis.C)
1491 plugin->SetAnalysisMacro(Form("%s.C", kTrainName.Data()));
1492// Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
1493 plugin->SetSplitMaxInputFileNumber(kGridFilesPerJob);
1494// Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
1495// plugin->SetMaxInitFailed(5);
1496// Optionally resubmit threshold.
1497// plugin->SetMasterResubmitThreshold(90);
1498// Optionally set time to live (default 30000 sec)
1499 plugin->SetTTL(30000);
1500// Optionally set input format (default xml-single)
1501 plugin->SetInputFormat("xml-single");
1502// Optionally modify the name of the generated JDL (default analysis.jdl)
1503 plugin->SetJDLName(Form("%s.jdl", kTrainName.Data()));
1504// Optionally modify the executable name (default analysis.sh)
1505 plugin->SetExecutable(Form("%s.sh", kTrainName.Data()));
1506// Optionally modify job price (default 1)
1507 plugin->SetPrice(1);
1508// Optionally modify split mode (default 'se')
1509 plugin->SetSplitMode("se");
1510 return plugin;
1511}
1512
1513//______________________________________________________________________________
1514void WriteConfig()
1515{
1516// Write train configuration in a file. The file name has the format:
1517// train_[trainName]_ddMonthyyyy_time.C
1518 if (kUseDate) {
1519 gSystem->Exec("date +%d%b%Y_%Hh%M > date.tmp");
1520 ifstream fdate("date.tmp");
1521 if (!fdate.is_open()) {
1522 ::Error("AnalysisTrainPWG4Jets.C::Export","Could not generate file name");
1523 return;
1524 }
1525 const char date[64];
1526 fdate.getline(date,64);
1527 fdate.close();
1528 gSystem->Exec("rm date.tmp");
1529 kTrainName = Form("train_%s_%s", kTrainName.Data(), date);
1530 } else {
1531 kTrainName = Form("train_%s", kTrainName.Data());
1532 }
1533 TString cdir = gSystem->WorkingDirectory();
1534 gSystem->MakeDirectory(kTrainName);
1535 gSystem->ChangeDirectory(kTrainName);
1536 ofstream out;
1537 out.open(Form("%sConfig.C",kTrainName.Data()), ios::out);
1538 if (out.bad()) {
1539 ::Error("AnalysisTrainPWG4Jets.C::Export", "Cannot open ConfigTrain.C for writing");
1540 return;
1541 }
1542 out << "{" << endl;
1543 out << " kTrainName = " << "\"" << kTrainName.Data() << "\";" << endl;
1544 out << " kProofCluster = " << "\"" << kProofCluster.Data() << "\";" << endl;
1545 out << " kProofUseAFPAR = " << kProofUseAFPAR << ";" << endl;
1546 if (kProofUseAFPAR)
1547 out << " kProofAFversion = " << kProofAFversion.Data() << ";" << endl;
1548 out << " kProofDataSet = " << "\"" << kProofDataSet.Data() << "\";" << endl;
1549 out << " kPluginUse = " << kPluginUse << ";" << endl;
1550 out << " kUsePAR = " << kUsePAR << ";" << endl;
1551 out << " kUseCPAR = " << kUseCPAR << ";" << endl;
1552 out << " kPluginRootVersion = " << "\"" << kPluginRootVersion.Data() << "\";" << endl;
1553 out << " kPluginAliRootVersion = " << "\"" << kPluginAliRootVersion.Data() << "\";" << endl;
1554 out << " kGridDatadir = " << "\"" << kGridDatadir.Data() << "\";" << endl;
1555 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1556 out << " kGridOutdir = " << "\"" << kGridOutdir.Data() << "\";" << endl;
1557 out << " kGridMaxMergeFiles = " << kGridMaxMergeFiles << ";" << endl;
1558 out << " kGridMergeExclude = " << "\"" << kGridMergeExclude.Data() << "\";" << endl;
1559 out << " kGridRunsPerMaster = " << kGridRunsPerMaster << ";" << endl;
1560 out << " kGridFilesPerJob = " << kGridFilesPerJob << ";" << endl;
1561 out << " kGridRunRange[0] = " << kGridRunRange[0] << ";" << endl;
1562 out << " kGridRunRange[1] = " << kGridRunRange[1] << ";" << endl;
1563 out << " kUseDebug = " << kUseDebug << ";" << endl;
1564 out << " kUseMC = " << kUseMC << ";" << endl;
1565 out << " kUseESDTags = " << kUseESDTags << ";" << endl;
1566 out << " kUseKinefilter = " << kUseKinefilter << ";" << endl;
1567 out << " kUseTR = " << kUseTR << ";" << endl;
1568 out << " kUseAODTags = " << kUseAODTags << ";" << endl;
1569 out << " kSaveTrain = " << "kFALSE;" << endl << endl;
1570 out << " // Analysis modules" << endl;
1571 out << " iAODanalysis = " << iAODanalysis << ";" << endl;
1572 out << " iAODhandler = " << iAODhandler << ";" << endl;
1573 out << " iESDfilter = " << iESDfilter << ";" << endl;
1574 out << " iJETAN = " << iJETAN << ";" << endl;
1575 out << "// Configuration fot the wagons" << endl;
1576 out << "}" << endl;
1577 ::Info("AnalysisTrainPWG4Jets.C::WriteConfig", "Train configuration wrote to file %s", Form("config_%s.C", kTrainName.Data()));
1578 gSystem->ChangeDirectory(cdir);
1579}
1580
1581//______________________________________________________________________________
1582Bool_t LoadConfig(const char *filename)
1583{
1584// Read train configuration from file
1585 if (gSystem->AccessPathName(filename)) {
1586 ::Error("AnalysisTrainPWG4Jets.C::LoadConfig", "Config file name not found");
1587 return kFALSE;
1588 }
1589 gROOT->ProcessLine(Form(".x %s", filename));
1590 ::Info("AnalysisTrainPWG4Jets.C::LoadConfig", "Train configuration loaded from file %s", filename);
1591 return kTRUE;
1592}
1593
1594Bool_t PatchJDL(){
1595 Printf(">>> Patching JDL");
1596 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1597 AliAnalysisAlien* gridHandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1598 TGridJDL *jdl = gridHandler->GetGridJDL();
1599 if(iJETAN)jdl->AddToPackages("fastjet","v2.4.0");
1600 gridHandler->WriteJDL(kFALSE);
0971dabc 1601 Printf("<<< Patching JDL");
c38e3b95 1602 return kTRUE;
1603}
1604
1605Bool_t PatchAnalysisMacro(){
1606 Printf(">>> Patching AnalysisMacro");
1607 gSystem->Exec(Form("mv %s.C %s.C_tmp",kTrainName.Data(),kTrainName.Data()));
1608
1609 ifstream in1;
1610 in1.open(Form("%s.C_tmp", kTrainName.Data()));
1611 char cLine[250];
1612 TString st;
1613 while(in1.getline(cLine,250)){
1614 st += cLine;
1615 st += "\n";
1616 }
1617 Int_t index;
1618 index = st.Index("gSystem->Load(\"libPhysics\");");
1619 index += strlen("gSystem->Load(\"libPhysics\");");
e84da0a5 1620 if(iJETAN&&kUsePAR){
c38e3b95 1621 TObjArray *arr;
1622 TObjString *objstr;
1623 arr = anaLibs.Tokenize(" ");
1624 TIter next(arr);
1625 TString add = "";
1626 add += "\n\n // added by CKB \n";
1627 while ((objstr=(TObjString*)next())){
e84da0a5 1628 if(objstr->GetString().Contains("PWG3"))continue;
c38e3b95 1629 if(objstr->GetString().EndsWith(".so"))add += Form("gSystem->Load(\"%s\");\n",objstr->GetString().Data());
1630 }
1631 delete arr;
3878a941 1632 // add += Form("AliLog::SetGlobalLogLevel(%d);\n",AliLog::GetGlobalLogLevel());
58ef946c 1633 add += "gSystem->AddIncludePath(\"./\") \n";
1634 if(gGrid&&kPluginAliRootVersion.Length()==0){
73b7619a 1635 add += "// Dirty hack for TRD reference data \n";
58ef946c 1636 add += "gSystem->Setenv(\"ALICE_ROOT\",\"";
1637 add += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
1638 add += "\"); \n";
1639 }
c38e3b95 1640 add += "// BKC \n\n";
1641 st.Insert(index,add.Data());
1642 }
e84da0a5 1643
1644 if(kUseDebug){
1645 st.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
1646 }
1647
c166d299 1648 index = st.Index("gSystem->AddIncludePath");
1649 st.Insert(index,"// CKB ");
1650
c38e3b95 1651 ofstream out;
1652 out.open(Form("%s.C", kTrainName.Data()));
1653 if (out.bad()) {
1654 return kFALSE;
1655 }
1656 out << st << endl;
1657 Printf("<<< Patching AnalysisMacro");
1658 return kTRUE;
1659
1660}