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[u/mrichter/AliRoot.git] / PWG4 / macros / AnalysisTrainPWG4Jets.C
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c38e3b95 1//===================== ANALYSIS TRAIN =========================================
2// To use: copy this macro to your work directory, modify the global part to match
3// your needs, then run root.
4// root[0] .L AnalysisTrain.C
5// Grid full mode as below (other modes: test, offline, submit, terminate)
121e4bd5 6// root[1] AnalysisTrainPWG-244Jets("grid", "full")
c38e3b95 7// CAF mode (requires root v5-23-02 + aliroot v4-16-Rev08)
8// root[2] AnalysisTrainPWG4Jets("proof")
9// Local mode requires AliESds.root or AliAOD.root in ./data directory
10// root[3] AnalysisTrainPWG4Jets("local")
11// In proof and grid modes, a token is needed and sourcing the produced environment file.
12//
13// If 'saveTrain' flag is set, the train will generate a directory name and run
14// in this directory. A configuration file 'ConfigTrain.C' will be generated.
15// One can replay at any time the train via:
16// root[1] AnalysisTrainPWG4Jets(ana_mode, plugin_mode, "train_default_<date>/ConfigTrain.C")
17
18// For Usage with fastjet run in "offline" first and then "submit"
19// jdl and analysismacro are automatically patched after "offline" mode
20
21// =============================================================================
22// ### General Steering variables
23// =============================================================================
24//== general setup variables
25TString kTrainName = "testAnalysis"; // *CHANGE ME* (no blancs or special characters)
26TString kJobTag = "PWG4 Jet Tasks analysis train configured"; // *CHANGE ME*
27
28// Usage of par files ONLY in grid mode and ONLY if the code is not available
29// in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
30// To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
31// AliRoot.
32Bool_t kUsePAR = kFALSE; // use par files for extra libs
33Bool_t kUseCPAR = kFALSE; // use par files for common libs
34Bool_t kFillAOD = kFALSE; // switch of AOD filling for on the fly analysis
35
36//== general input and output variables
9a5c5b1e 37
c38e3b95 38Int_t iAODanalysis = 1; // Analysis on input AOD's
39Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
40Int_t iESDfilter = 0; // ESD to AOD filter (barrel + muon tracks)
e84da0a5 41Int_t iPhysicsSelection = 1; // ESD to AOD filter (barrel + muon tracks)
c38e3b95 42Bool_t kUseKinefilter = kFALSE; // use Kinematics filter
43Bool_t kUseMuonfilter = kFALSE; // use Kinematics filter
44TString kCommonOutputFileName = "PWG4_JetTasksOutput.root";
45
46
47//== general process variables
48
49// ### Other flags to steer the analysis
50//==============================================================================
9a5c5b1e 51Bool_t kSkipTerminate = kTRUE; // Do not call Teminate
c38e3b95 52Bool_t kUseDate = kFALSE; // use date in train name
53Bool_t kUseDebug = kTRUE; // activate debugging
c28abe00 54Int_t kUseSysInfo = 0; // activate debugging
c38e3b95 55Bool_t kUseMC = kTRUE; // use MC info
56Bool_t kIsMC = kTRUE; // is MC info, if false it overwrites Use(AOD)MC
57Bool_t kUseAODMC = kTRUE; // use MC infA
58Bool_t kUseESDTags = kFALSE; // use ESD tags for selection
59Bool_t kUseTR = kFALSE; // use track references
60Bool_t kUseAODTags = kFALSE; // use AOD tags
61Bool_t kSaveTrain = kFALSE; // save train configuration as:
62
9a5c5b1e 63
c38e3b95 64// ### Analysis modules to be included. Some may not be yet fully implemented.
65//==============================================================================
66Int_t iJETAN = 1; // Jet analysis (PWG4) // 1 write standard 2 write non-standard jets, 3 wrtie both
67Int_t iDIJETAN = 1;
e6993a52 68Int_t iJETANLib = 1;
c38e3b95 69Int_t iPWG1QASym = 0; // Eva's QA task compiled on the fly...
70Int_t iPWG4JetTasks = 0; // all jet tasks flag for lib laoding
71Int_t iPWG4JetServices = 0; // jet spectrum analysis
72Int_t iPWG4JetSpectrum = 0; // jet spectrum analysis
73Int_t iPWG4UE = 0; // Underlying Event analysis
c166d299 74Int_t iPWG4TmpSourceSara = 0; // Underlying Event analysis not in svn
75Int_t iPWG4TmpSourceFrag = 0; // Bastian's Fragmentation function not in svn
9f77f0ce 76Int_t iPWG4JetChem = 0; // Jet chemistry
c38e3b95 77Int_t iPWG4PtQAMC = 0; // Marta's QA tasks
78Int_t iPWG4PtSpectra = 0; // Marta's QA tasks
79Int_t iPWG4PtQATPC = 0; // Marta's QA tasks
80Int_t iPWG4ThreeJets = 0; // Sona's thrust task
b53f2e4f 81Int_t iPWG4KMeans = 0; // Andreas' KMeans task
d2e6cdd5 82Int_t iPWG4Cluster = 0; // CKB cluster task
911a740f 83Int_t iPWG4PartCorrLibs = 0; // Gustavo's part corr analysis
c38e3b95 84Int_t iPWG4PartCorr = 0; // Gustavo's part corr analysis
d2e6cdd5 85Int_t iPWG4CaloQA = 0; // Gustavo's part corr analysis
86Int_t iPWG4JetCorr = 0; // Paul's jet corr analysis
911a740f 87Int_t iPWG4Tagged = 0; // Gustavo's part corr analysis
121e4bd5 88Int_t iPWG4omega3pi = 0; // Omega to 3 pi analysis (PWG4)
53c63663 89Int_t iPWG4GammaConv = 0; // Gamma Conversio
c38e3b95 90Int_t kHighPtFilterMask = 16; // change depending on the used AOD Filter
e6993a52 91TString kDeltaAODJetName = "AliAOD.Jets.root";
53c63663 92TString kDeltaAODPartCorrName = "deltaAODPartCorr.root";
c38e3b95 93
94
95//==============================================================================
96// ### PROOF Steering varibales
97//==============================================================================
98//== proof setup variables
99TString kProofCluster = "alicecaf.cern.ch";
100Bool_t kProofUseAFPAR = kFALSE; // use AF special par file
101TString kProofAFversion = "AF-v4-17";
102//== proof input and output variables
103TString kProofDataSet = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
104Bool_t kProofSaveToAlien = kFALSE; // save proof outputs in AliEn train_[trainName]_ddMonthyyyy_time.C
105TString kProofOutdir = "";
106Bool_t kProofClearPackages = kFALSE;
107Int_t kProofEvents = 10000;
108Int_t kProofOffset = 0;
109//== proof process variables
110
111
112//==============================================================================
113// ### Grid plugin Steering varibiables
114//==============================================================================
115//== grid plugin setup variables
116Bool_t kPluginUse = kTRUE; // do not change
117Bool_t kPluginUseProductionMode = kFALSE; // use the plugin in production mode
0971dabc 118TString kPluginRootVersion = "v5-26-00b-2"; // *CHANGE ME IF MORE RECENT IN GRID*
3878a941 119TString kPluginAliRootVersion = "v4-19-04-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
9a5c5b1e 120Bool_t kPluginMergeViaJDL = kTRUE; // merge via JDL
121Bool_t kPluginFastReadOption = kFALSE; // use xrootd tweaks
122Bool_t kPluginOverwriteMode = kTRUE; // overwrite existing collections
c38e3b95 123// TString kPluginExecutableCommand = "root -b -q";
124TString kPluginExecutableCommand = "source /Users/kleinb/setup_32bit_aliroot_trunk_clean_root_trunk.sh; alienroot -b -q ";
9a5c5b1e 125
c38e3b95 126// == grid plugin input and output variables
127TString kGridDatadir = "/alice/sim/PDC_08b/LHC09a1/AOD/";
128TString kGridLocalRunList = "";
129TString kGridOutdir = ""; // AliEn output directory. If blank will become output_<kTrainName>
3878a941 130TString kGridDataSet = ""; // sub working directory not to confuse different run xmls
c38e3b95 131Int_t kGridRunRange[2] = {0, -1}; // Set the run range
132TString kGridRunPattern = "%03d"; // important for leading zeroes!!
133TString kGridPassPattern = "";
134TString kGridExtraFiles = ""; // files that will be added to the input list in the JDL...
135Int_t kGridMaxMergeFiles = 50; // Number of files merged in a chunkgridrunragn
136TString kGridMergeExclude = "AliAOD.root"; // Files that should not be merged
6408fe42 137TString kGridOutputStorages = "disk=2"; // Make replicas on the storages
c38e3b95 138// == grid process variables
c28abe00 139Int_t kGridRunsPerMaster = 100; // Number of runs per master job
e84da0a5 140Int_t kGridFilesPerJob = 100; // Maximum number of files per job (gives size of AOD)
c38e3b95 141
142//==============================================================================
143// ### Local Steering variables
144//==============================================================================
145//== local setup variables
146//== local input and output variables
147TString kLocalXMLDataset = ""; // Change local xml dataset for local interactive analysis
148TString kLocalDataList = "local_deltaaod.txt"; // Change local xml dataset for local interactive analysis
149// == local process variables
150
151
152
153// Temporaries.
154TString anaPars = "";
155TString anaLibs = "";
e84da0a5 156TString anaLibsExtra = "";
c38e3b95 157TString anaSources = "";
158// Function signatures
159class AliAnalysisAlien;
160
161//______________________________________________________________________________
162void AnalysisTrainPWG4Jets(const char *analysis_mode="local",
163 const char *plugin_mode="",
164 const char *config_file="",Int_t iOffset = 0)
165{
166// Main analysis train macro. If a configuration file is provided, all parameters
167// are taken from there but may be altered by CheckModuleFlags.
3878a941 168
c38e3b95 169 if (strlen(config_file) && !LoadConfig(config_file)) return;
3878a941 170
c38e3b95 171 if(iOffset)kProofOffset = iOffset;
172 TString smode(analysis_mode);
173 smode.ToUpper();
174 if (kSaveTrain)WriteConfig();
175 // Check compatibility of selected modules
176 CheckModuleFlags(smode);
e84da0a5 177 // gROOT->ProcessLine(".trace");
c38e3b95 178
179 printf("==================================================================\n");
180 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", kTrainName.Data(),smode.Data());
181 printf("==================================================================\n");
182 printf("= Configuring analysis train for: =\n");
183 if (iAODanalysis) printf("= AOD analysis =\n");
184 else printf("= ESD analysis =\n");
e84da0a5 185 if (iPhysicsSelection) printf("= Physics selection =\n");
c38e3b95 186 if (iESDfilter) printf("= ESD filter =\n");
187 if (iJETAN) printf("= Jet analysis =\n");
188 printf("==================================================================\n");
d2e6cdd5 189 printf(":: use Fill AOD %d\n", (UInt_t)kFillAOD);
c38e3b95 190 printf(":: use MC truth %d\n", (UInt_t)kUseMC);
191 printf(":: use KINE filter %d\n", (UInt_t)kUseKinefilter);
192 printf(":: use track refs %d\n", (UInt_t)kUseTR);
193 printf(":: use tags %d\n", (UInt_t)kUseESDTags);
194 printf(":: use AOD tags %d\n", (UInt_t)kUseAODTags);
195 printf(":: use debugging %d\n", (UInt_t)kUseDebug);
196 printf(":: use PAR files %d\n", (UInt_t)kUsePAR);
197 printf(":: use AliEn plugin %d\n", (UInt_t)kPluginUse);
53c63663 198 printf(":: use PWG1 QA sym %d\n", iPWG1QASym);
121e4bd5 199 printf(":: use PWG4 Source Sara %d\n",iPWG4TmpSourceSara);
c166d299 200 printf(":: use PWG4 Source BB %d\n",iPWG4TmpSourceFrag);
9f77f0ce 201 printf(":: use PWG4 Jet Chem %d\n",iPWG4JetChem);
53c63663 202 printf(":: use PWG4 Jet tasks %d\n",iPWG4JetTasks);
203 printf(":: use PWG4 Jet Services %d\n",iPWG4JetServices);
204 printf(":: use PWG4 Jet Spectrum %d\n",iPWG4JetSpectrum);
205 printf(":: use PWG4 UE %d \n",iPWG4UE);
206 printf(":: use PWG4 Pt QA MC %d\n",iPWG4PtQAMC);
207 printf(":: use PWG4 Pt Spectra %d\n",iPWG4PtSpectra);
208 printf(":: use PWG4 Pt QA TPC %d\n",iPWG4PtQATPC);
209 printf(":: use PWG4 Three Jets %d\n",iPWG4ThreeJets);
b53f2e4f 210 printf(":: use PWG4 KMeans %d\n",iPWG4KMeans);
d2e6cdd5 211 printf(":: use PWG4 Cluster %d\n",iPWG4Cluster);
53c63663 212 printf(":: use PWG4 Part Corr %d\n",iPWG4PartCorr);
d2e6cdd5 213 printf(":: use PWG4 Calo QA %d\n",iPWG4CaloQA);
214 printf(":: use PWG4 Jet Corr %d\n",iPWG4JetCorr);
911a740f 215 printf(":: use PWG4 Tagged %d\n",iPWG4Tagged);
121e4bd5 216 printf(":: use PWG4 omega to 3 pions %d\n",iPWG4omega3pi);
217
53c63663 218 printf(":: use PWG4 Gamma Conv %d\n",iPWG4GammaConv);
219 printf(":: use HighPt FilterMask %d\n",kHighPtFilterMask);
3878a941 220
c38e3b95 221 //==========================================================================
222 // Connect to back-end system
223 if (!Connect(smode)) {
224 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
225 return;
226 }
227
228 // Load common libraries and set include path
229 if (!LoadCommonLibraries(smode)) {
230 ::Error("AnalysisTrain", "Could not load common libraries");
231 return;
232 }
3878a941 233
234
c38e3b95 235
236 // Make the analysis manager and connect event handlers
e84da0a5 237 AliAnalysisManager *mgr = new AliAnalysisManager("PWG4Train", "pwg4 mini train");
c38e3b95 238 if (kCommonOutputFileName.Length()>0)mgr->SetCommonFileName(kCommonOutputFileName.Data());
239 if (kProofSaveToAlien) mgr->SetSpecialOutputLocation(kProofOutdir);
4a6f59cb 240 mgr->SetNSysInfo(0);
c38e3b95 241 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
53c63663 242 if (kUseSysInfo)mgr->SetNSysInfo(kUseSysInfo);
9a5c5b1e 243 mgr->SetSkipTerminate(kSkipTerminate);
4a6f59cb 244
c38e3b95 245 // Load analysis specific libraries
246 if (!LoadAnalysisLibraries(smode)) {
247 ::Error("AnalysisTrain", "Could not load analysis libraries");
248 return;
249 }
250
251 // Create input handler (input container created automatically)
252 if (iAODanalysis) {
253 // AOD input handler
254 AliAODInputHandler *aodH = new AliAODInputHandler();
255 mgr->SetInputEventHandler(aodH);
e6993a52 256 if (iPWG4JetTasks) aodH->AddFriend(Form("deltas/%s",kDeltaAODJetName.Data()));
257 if (iPWG4PartCorr) aodH->AddFriend(Form("deltas/%s"kDeltaAODJetName.Data()));
c38e3b95 258 } else {
259 // ESD input handler
260 AliESDInputHandler *esdHandler = new AliESDInputHandler();
261 if (kUseESDTags) esdHandler->SetReadTags();
c166d299 262 esdHandler->SetReadFriends(kFALSE);
c38e3b95 263 mgr->SetInputEventHandler(esdHandler);
4a6f59cb 264 // if(iPWG4PtQATPC&& !kTrainName.Contains("pass5"))esdHandler->SetActiveBranches("ESDfriend");
c166d299 265
c38e3b95 266 }
f4d11ac8 267
c38e3b95 268 // Monte Carlo handler
269 if (kUseMC && !iAODanalysis) {
270 AliMCEventHandler* mcHandler = new AliMCEventHandler();
271 mgr->SetMCtruthEventHandler(mcHandler);
272 mcHandler->SetReadTR(kUseTR);
273 }
274 // AOD output container, created automatically when setting an AOD handler
275 if (iAODhandler) {
276 // AOD output handler
277 AliAODHandler* aodHandler = new AliAODHandler();
278 aodHandler->SetOutputFileName("AliAOD.root");
6408fe42 279 aodHandler->SetFillAODforRun(kFillAOD);
c38e3b95 280
281 mgr->SetOutputEventHandler(aodHandler);
121e4bd5 282 //
c38e3b95 283 if (iAODanalysis) {
284
285 // aodHandler->SetCreateNonStandardAOD();
286 // if (iJETAN)aodHandler->SetOutputFileName(kDeltaAODJetName.Data());
287 }
288 AliAnalysisDataContainer * cout_aod = mgr->GetCommonOutputContainer();
289 cout_aod->SetSpecialOutput();
290 }
291 // Debugging if needed
b03b08a3 292
3878a941 293 if (kUseDebug){
294 mgr->SetDebugLevel(3);
295 }
b03b08a3 296 else{
297 AliLog::SetGlobalLogLevel(AliLog::kError);
298 }
c38e3b95 299 //==========================================================================
300 // Create the chain. In this example it is created only from ALIEN files but
301 // can be done to work in batch or grid mode as well.
302 TChain *chain = CreateChain(smode, plugin_mode);
303
304 //==========================================================================
305 // Load the tasks configuration macros for all wagons. These files are supposed now to be
306 // in the current workdir, but in AliEn they will be in the file catalog,
307 // mapped from AliRoot and pecified in the jdl input list.
308
309 // For now connection to top input container and common AOD output container
310 // is done in this macro, but in future these containers will be connected
311 // from each task configuration macro.
e84da0a5 312 if(iPhysicsSelection && !iAODanalysis){
d2e6cdd5 313 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
314 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kIsMC,kTRUE);
e84da0a5 315 }
316
c38e3b95 317 if (iESDfilter && !iAODanalysis) {
318 // ESD filter task configuration.
319 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskESDFilter.C");
320 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilter(kUseKinefilter,kUseMuonfilter);
321 }
322
323 // AOD tags
324 if (kUseAODTags) {
325 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
326 mgr->AddTask(tagTask);
327 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
328 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
329 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
330 mgr->ConnectOutput(tagTask, 1, coutTags);
331 }
332
333 // Jet analysis
334 if (iJETAN) {
335 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJets.C");
336 AliAnalysisTaskJets *taskjets = 0;
337 if(iJETAN&1)taskjets = AddTaskJets(kHighPtFilterMask);
b53f2e4f 338 if(iJETAN&2){
339 UInt_t selection = 0;
d2e6cdd5 340 if(!kFillAOD) selection = 0xffffff; //&~(1<<13);
b53f2e4f 341 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<6|1<<7|1<<8|1<<9;
342 AddTaskJetsDelta(kDeltaAODJetName.Data(),kHighPtFilterMask,kUseAODMC,selection);
343 }
c38e3b95 344 if (!taskjets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
345 }
346
347 if (iDIJETAN) {
348 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskDiJets.C");
349 AliAnalysisTaskDiJets *taskdijets = 0;
350 taskdijets = AddTaskDiJets();
351 if (!taskdijets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
352 }
353
c38e3b95 354 if(iPWG1QASym){
99bfd7f7 355 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PWG1macros/AddTaskQAsym.C");
c38e3b95 356 AliAnalysisTaskQASym *taskQASym = AddTaskQAsym(-1);
357 if (!taskQASym) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQASym cannot run for this train conditions - EXCLUDED");
121e4bd5 358 }
c38e3b95 359
121e4bd5 360
361
362 if(iPWG4TmpSourceSara){
363 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskEta.C");
364 AliAnalysisTaskEta *taskEta = AddTaskEta();
365 if (!taskEta) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskEta cannot run for this train conditions - EXCLUDED");
c38e3b95 366 }
367
c166d299 368 if(iPWG4TmpSourceFrag){
369 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFragFunc.C");
370 UInt_t selection = 1<<2;
371 AliAnalysisTaskFragFunc *taskFrag = AddTaskFragFunc(kHighPtFilterMask, kUseAODMC,iPhysicsSelection, selection);
372 if (!taskFrag) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskFragFunc cannot run for this train conditions - EXCLUDED");
373 }
374
c580ebbb 375
9f77f0ce 376 if(iPWG4JetChem){
377 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetChem.C");
378 AliAnalysisTask *taskChem = AddTaskJetChem();
c580ebbb 379 if (!taskChem) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetChem cannot run for this train conditions - EXCLUDED");
380 }
381
382
c38e3b95 383 if(iPWG4JetServices){
384 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetServices.C");
385 AliAnalysisTaskJetServices *taskjetServ = 0;
386 taskjetServ = AddTaskJetServices();
387 if (!taskjetServ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetServices cannot run for this train conditions - EXCLUDED");
53c63663 388 if(kGridRunRange[0]>0)taskjetServ->SetRunRange(kGridRunRange[0],kGridRunRange[1]);
0971dabc 389 else taskjetServ->SetRunRange(104000,125000);
c28abe00 390 if(!kIsMC) taskjetServ->SetRealData(kTRUE);
b53f2e4f 391 if(!iPhysicsSelection)taskjetServ->SetUsePhysicsSelection(kFALSE);
9f77f0ce 392 taskjetServ->SetDebugLevel(0);
c38e3b95 393 }
394
c38e3b95 395 if(iPWG4JetSpectrum){
396 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetSpectrum2.C");
397 AliAnalysisTaskJetSpectrum2 *taskjetSpectrum = 0;
b53f2e4f 398 if(iPWG4JetSpectrum&1){
399 taskjetSpectrum = AddTaskJetSpectrum2("jets","",kHighPtFilterMask,iPhysicsSelection);
e6993a52 400 if(!iAODanalysis){
401 taskjetSpectrum = AddTaskJetSpectrum2("jets","tracks32",32,iPhysicsSelection); // tmp hack to give it a different name
402 taskjetSpectrum = AddTaskJetSpectrum2("jets","tracks64",64,iPhysicsSelection);
403 }
d2e6cdd5 404 if (!taskjetSpectrum) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetSpectrum2 cannot run for this train conditions - EXCLUDED");
3878a941 405 taskjetSpectrum->SetDebugLevel(1);
b53f2e4f 406 }
d2e6cdd5 407
e6993a52 408 if(iPWG4JetSpectrum&2){
409 UInt_t selection = 0;
410 if(!iAODanalysis) selection = 0xffffff;
411 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
412 AddTaskJetSpectrum2Delta(kHighPtFilterMask,kUseAODMC,iPhysicsSelection,selection);
413 }
9a5c5b1e 414 if(iJETAN==3&&!kFillAOD&!iAODanalysis){
565584e8 415 AddTaskJetSpectrum2("jetsAOD_FASTKT00","",kHighPtFilterMask,iPhysicsSelection);
b53f2e4f 416 AddTaskJetSpectrum2("jetsAOD_FASTKT01","",kHighPtFilterMask,iPhysicsSelection);
417 AddTaskJetSpectrum2("jetsAOD_FASTKT02","",kHighPtFilterMask,iPhysicsSelection);
418 AddTaskJetSpectrum2("jetsAOD_FASTKT06","",kHighPtFilterMask,iPhysicsSelection);
419 AddTaskJetSpectrum2("jetsAOD_FASTKT08","",kHighPtFilterMask,iPhysicsSelection);
565584e8 420 if(kIsMC){
565584e8 421 AddTaskJetSpectrum2("jetsAODMC2b_FASTKT00","",kHighPtFilterMask,iPhysicsSelection);
422 AddTaskJetSpectrum2("jetsAODMC2b_FASTKT01","",kHighPtFilterMask,iPhysicsSelection);
423 AddTaskJetSpectrum2("jetsAODMC2b_FASTKT02","",kHighPtFilterMask,iPhysicsSelection);
424 AddTaskJetSpectrum2("jetsAODMC2b_FASTKT06","",kHighPtFilterMask,iPhysicsSelection);
425 AddTaskJetSpectrum2("jetsAODMC2b_FASTKT08","",kHighPtFilterMask,iPhysicsSelection);
426 }
b53f2e4f 427 }
c38e3b95 428 }
c38e3b95 429 if(iPWG4UE){
430 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskUE.C");
431 AliAnalysisTaskUE *taskUE = 0;
432 if(iPWG4UE&1)taskUE = AddTaskUE();
433 if(iPWG4UE&2){
b03b08a3 434 taskUE = AddTaskUE("jetsAOD_CDF07","CDF","LJ","TRANSV","MSP");
435 taskUE = AddTaskUE("jetsAOD_CDF07","CDF","LJCC","TRANSV","MSP");
436 taskUE = AddTaskUE("jetsAOD_CDF07","CDF","LJ","TRANSV","MAP");
437 taskUE = AddTaskUE("jetsAOD_ICDF","CDF","LJ","TRANSV","MSP");
438 taskUE = AddTaskUE("jetsAOD_ICDF","CDF","LJCC","TRANSV","MSP");
439 taskUE = AddTaskUE("jetsAOD_ICDF","CDF","LJCC","TRANSV","MAP");
440 taskUE = AddTaskUE("jetsAOD_NONE","CDF","MP","TRANSV","MSP");
6408fe42 441 taskUE = AddTaskUE("jetsAOD_NONE","CDF","MP","TRANSV","MAP");
442 taskUE = AddTaskUE("jetsAOD_FASTKT04","CDF","LJ","TRANSV","MSP");
b03b08a3 443 taskUE = AddTaskUE("jetsAOD_FASTKT04","CDF","LJ","TRANSV","MAP");
c38e3b95 444 }
2bb1f4ca 445
c38e3b95 446 if (!taskUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskUE cannot run for this train conditions - EXCLUDED");
447 }
448
449 if(iPWG4ThreeJets){
450 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskThreeJets.C");
451 AliAnalysisTaskThreeJets *taskThree = AddTaskThreeJets();
452 if(!taskThree)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskThreets cannot run for this train conditions - EXCLUDED");
453 }
c38e3b95 454 if(iPWG4PtQAMC){
455 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQAMC.C");
456 AliPWG4HighPtQAMC *taskQAMC = AddTaskPWG4HighPtQAMC();
457 if (!taskQAMC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQAMC cannot run for this train conditions - EXCLUDED");
458 }
459
460 if(iPWG4PtQATPC){
461 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQATPConly.C");
462 AliPWG4HighPtQATPConly *taskQATPC = AddTaskPWG4HighPtQATPConly();
463 if (!taskQATPC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQATPC cannot run for this train conditions - EXCLUDED");
464 }
3878a941 465
c38e3b95 466 if(iPWG4PtSpectra){
467 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtSpectra.C");
468 AliPWG4HighPtSpectra *taskPtSpectra = AddTaskPWG4HighPtSpectra();
469 if (!taskPtSpectra) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskPtSpectra cannot run for this train conditions - EXCLUDED");
470 }
b53f2e4f 471 if(iPWG4KMeans){
472 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskKMeans.C");
473 AliAnalysisTaskKMeans *taskKMeans = AddTaskKMeans();
474 if (!taskKMeans) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskKMenans cannot run for this train conditions - EXCLUDED");
475 }
476
d2e6cdd5 477 if(iPWG4Cluster){
478 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCluster.C");
479 AliAnalysisTaskJetCluster *taskCl = 0;
6408fe42 480 if(iPWG4Cluster&1){
481 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"KT");
6408fe42 482 }
d2e6cdd5 483 if(iPWG4Cluster&2){
484 UInt_t selection = 0;
485 if(!iAODanalysis) selection = 0xffffff;
486 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
6408fe42 487 AddTaskJetClusterDelta(kHighPtFilterMask,kUseAODMC,iPhysicsSelection,"KT",selection);
0971dabc 488 }
489 if(iPWG4Cluster&4){
490 UInt_t selection = 0;
491 if(!iAODanalysis) selection = 0xffffff;
492 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
493 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"CA");
6408fe42 494 AddTaskJetClusterDelta(kHighPtFilterMask,kUseAODMC,iPhysicsSelection,"CA",selection);
d2e6cdd5 495 }
0971dabc 496
497
d2e6cdd5 498 if (!taskCl) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCluster cannot run for this train conditions - EXCLUDED");
499
500 }
c38e3b95 501 if(iPWG4PartCorr){
502 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPartCorr.C");
14526afb 503 AliAnalysisTaskParticleCorrelation *taskpartcorrPHOS = AddTaskPartCorr("AOD", "PHOS",kFALSE,kIsMC);
c38e3b95 504 if (!taskpartcorrPHOS) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation PHOS cannot run for this train conditions - EXCLUDED");
14526afb 505 AliAnalysisTaskParticleCorrelation *taskpartcorrEMCAL = AddTaskPartCorr("AOD", "EMCAL",kFALSE,kIsMC);
c38e3b95 506 if (!taskpartcorrEMCAL) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation EMCAL cannot run for this train conditions - EXCLUDED");
507 if(kDeltaAODPartCorrName.Length()>0)mgr->RegisterExtraFile(kDeltaAODPartCorrName.Data()); // hmm this is written anyway.... but at least we do not register it...
121e4bd5 508 }
509
d2e6cdd5 510 if(iPWG4CaloQA){
511 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/QA/AddTaskCalorimeterQA.C");
f4d11ac8 512 AliAnalysisTaskParticleCorrelation *taskcaloQA = AddTaskCalorimeterQA("ESD",kFALSE,kIsMC);
d2e6cdd5 513 if(!taskcaloQA)::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation QA cannot run - EXCLUDED");
514 }
515
d2e6cdd5 516 if(iPWG4JetCorr){
517 // using namespace JetCorrelHD;
518
519 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCorrel.C");
520 AliAnalysisTaskJetCorrel *taskjetcorr = AddTaskJetCorrel();
c166d299 521 if (!taskjetcorr) ::Warning("AnalysisTrainNew", "AliAnalysisTaskJetCorrel cannot run for this train conditions - EXCLUDED");
d2e6cdd5 522 }
523
911a740f 524 if(iPWG4Tagged){
525 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskTaggedPhotons.C");
526 AliAnalysisTaskTaggedPhotons * taskTagged = AddTaskTaggedPhotons(kFALSE); // EMCAL
527 // taskTagged = AddTaskTaggedPhotons(kTRUE); // PHOS
528 if (!taskTagged) ::Warning("AnalysisTrainNew", "AliAnalysisTaskTaggedPhotons cannot run for this train conditions - EXCLUDED");
529 }
121e4bd5 530 if (iPWG4omega3pi) {
531 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskomega3pi.C");
532 AliAnalysisTaskOmegaPi0PiPi *taskomega3pi = AddTaskomega3pi();
533 if (!taskomega3pi) ::Warning("AnalysisTrainNew", "AliAnalysisTaskomega3pi cannot run\
534 for these train conditions - EXCLUDED");
535 }
536
53c63663 537 // PWG4 gamma conversion analysis
538 if (iPWG4GammaConv) {
539 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskGammaConversion.C");
540 TString cdir = gSystem->WorkingDirectory();
541 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
542 // TString gcArguments = "-run-on-train -run-jet -run-chic -run-neutralmeson -run-cf";
b53f2e4f 543 TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz -bg-off";
53c63663 544 if(!kIsMC)gcArguments += " -mc-off";
545 AliAnalysisTaskGammaConversion * taskGammaConversion = AddTaskGammaConversion(gcArguments,mgr->GetCommonInputContainer());
546 gSystem->ChangeDirectory(cdir);
121e4bd5 547 taskGammaConversion->SelectCollisionCandidates();
53c63663 548 if (!taskGammaConversion) ::Warning("AnalysisTrainNew", "AliAnalysisTaskGammaConversion cannot run for these train conditions - EXCLUDED");
549 }
550
3878a941 551
c38e3b95 552 //==========================================================================
553 // FOR THE REST OF THE TASKS THE MACRO AddTaskXXX() is not yet implemented/
554 // Run the analysis
555 //
556 if (kPluginUse) {
557 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
558 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
559 }
560
561 if (mgr->InitAnalysis()) {
562 mgr->PrintStatus();
563 // if (kSaveTrain || strlen(config_file)) gSystem->ChangeDirectory(kTrainName);
e84da0a5 564 if (!strcmp(plugin_mode,"submit")&&smode=="GRID"){
c38e3b95 565 TString alien_workdir = gGrid->GetHomeDirectory();
566 if (iAODanalysis) alien_workdir += "analysisAOD";
567 else alien_workdir += "analysisESD";
3878a941 568 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
c38e3b95 569 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
e84da0a5 570 printf("=== AnalysisTrainPWG4Jets:: Registering jdl in the work directory alien://%s/%s, should be done by the manager! ===\n",
c38e3b95 571 alien_workdir.Data(),gridhandler->GetGridOutputDir());
572 TFile::Cp(Form("file:%s.jdl",kTrainName.Data()), Form("alien://%s/%s/%s.jdl",alien_workdir.Data(),
573 gridhandler->GetGridOutputDir(),kTrainName.Data()));
574 }
3878a941 575 AliLog::SetGlobalLogLevel(AliLog::kError);
c166d299 576 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
577 TFile * fM = TFile::Open("manager_local.root","RECREATE");
578 mgr->Write();
579 fM->Close();
580 }
581
c38e3b95 582 StartAnalysis(smode, chain);
c166d299 583
4a6f59cb 584 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
585 for(int i = 0;i < mgr->GetTopTasks()->GetEntries();i++){
586 mgr->ProfileTask(i);
587 }
588 }
c38e3b95 589 if (!strcmp(plugin_mode, "offline")&&smode=="GRID"){
e84da0a5 590 // Offline mode path files
591 // PatchJDL();
592 PatchAnalysisMacro();
593 }
c38e3b95 594
e84da0a5 595 if (kSaveTrain && smode=="GRID") {
596 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
597 TString alien_workdir = gGrid->GetHomeDirectory();
598 if (iAODanalysis) alien_workdir += "analysisAOD";
3878a941 599 else alien_workdir += "analysisESD";
600 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
e84da0a5 601 // kGridOutdir = gridhandler->GetGridOutputDir();
602 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
c38e3b95 603 alien_workdir.Data());
e84da0a5 604 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data())))
605 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
606 if (strcmp(plugin_mode, "test"))
607 TFile::Cp(Form("file:%sConfig.C",kTrainName.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
608 }
609 }
c38e3b95 610}
611
612//______________________________________________________________________________
613void StartAnalysis(const char *mode, TChain *chain) {
614// Start analysis.
615 Int_t imode = -1;
616 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
617 if (!strcmp(mode, "LOCAL")) imode = 0;
618 if (!strcmp(mode, "PROOF")) imode = 1;
619 if (!strcmp(mode, "GRID")) imode = 2;
620 switch (imode) {
621 case 0:
622 if (!chain) {
623 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
624 return;
625 }
626 mgr->StartAnalysis(mode, chain);
627 return;
628 case 1:
629 if (!kProofDataSet.Length()) {
630 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "kProofDataSet is empty");
631 return;
632 }
633 mgr->StartAnalysis(mode, kProofDataSet, kProofEvents,kProofOffset);
634 return;
635 case 2:
636 if (kPluginUse) {
637 if (!mgr->GetGridHandler()) {
638 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Grid plugin not initialized");
639 return;
640 }
641 mgr->StartAnalysis("grid");
642 } else {
643 if (!chain) {
644 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
645 return;
646 }
647 mgr->StartAnalysis(mode, chain);
648 }
649 return;
650 }
651}
652
653//______________________________________________________________________________
654void CheckModuleFlags(const char *mode) {
655// Checks selected modules and insure compatibility
656 Int_t imode = -1;
657 if (!strcmp(mode, "LOCAL")) imode = 0;
658 if (!strcmp(mode, "PROOF")) imode = 1;
659 if (!strcmp(mode, "GRID")) imode = 2;
660
661
e84da0a5 662 if (kUseCPAR) {
663 kPluginAliRootVersion = ""; // NO aliroot if we use CPAR
664 }
c38e3b95 665
666 if (imode==1) {
667 if (!kUsePAR) {
668 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
669 kUsePAR = kTRUE;
670 }
671 }
672 if (imode != 2) {
673 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
674 kPluginUse = kFALSE;
675 }
676
677
678 if(!kIsMC){
679 // switch off anthin related to MC
680 kUseMC = 0;
681 kUseAODMC = 0;
682 kUseTR = kFALSE;
683 }
684
685 if (iAODanalysis) {
686 // AOD analysis
687 if (kUseMC)
688 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
689 if (kUseAODTags)
690 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
691 kUseMC = kFALSE;
692 kUseTR = kFALSE;
693 kUseAODTags = kFALSE;
694 if (iESDfilter)
695 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
696 iESDfilter = 0;
e84da0a5 697 if (iPhysicsSelection)
698 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "Physics Selection disabled in analysis on AOD's");
699 iPhysicsSelection = 0;
c38e3b95 700 if (!iAODhandler) {
701 if (iJETAN)
702 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
703 iJETAN = 0;
704 iDIJETAN = 0;
705 }
706 // Disable tasks that do not work yet on AOD data
707 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
708 iPWG4PtQAMC = 0;
709 if( iPWG4PtQATPC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtTPC disabled in analysis on AOD's");
710 iPWG4PtQATPC = 0;
711 if( iPWG4PtSpectra)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
712 iPWG4PtSpectra = 0;
b53f2e4f 713 if(iPWG4KMeans)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4KMeans disabled on AOD's");
714 iPWG4KMeans = 0;
d2e6cdd5 715 if (iPWG4JetCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4Jetcorr disabled on AOD's");
716 iPWG4JetCorr = 0;
c38e3b95 717 if (iPWG4PartCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
718 iPWG4PartCorr = 0;
d2e6cdd5 719 if (iPWG4CaloQA)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4CaloQA disabled on AOD's");
720 iPWG4CaloQA = 0;
911a740f 721 if (iPWG4Tagged)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4tagged disabled on AOD's");
722 iPWG4Tagged = 0;
121e4bd5 723 if (iPWG4omega3pi)
724 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
725 iPWG4omega3pi = 0;
c38e3b95 726 if(iPWG1QASym)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG1 QA Sym disabled in analysis on AOD's");
53c63663 727 if (iPWG4GammaConv)::Info("AnalysisPWG4Jets.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's");
728 iPWG4GammaConv = 0;
c38e3b95 729 iPWG1QASym = 0;
730 } else {
731 // ESD analysis
732 if (!kUseMC){
733 kUseTR = kFALSE;
734
735 if(kUseKinefilter)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Kine Filter disabled in analysis without MC");
736 kUseKinefilter = kFALSE;
737 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis without MC");
738 iPWG4PtQAMC = 0;
739
740 }
741 if (!kUseTR) {
c166d299 742 if(iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "iPWG4QATPCMC disabled if not reading track references");
b03b08a3 743 iPWG4PtQAMC = 0;
c38e3b95 744 }
e84da0a5 745 if (iJETAN){
746 iESDfilter=1;
747 }
c38e3b95 748 if (!iESDfilter){
749 kUseKinefilter = kFALSE;
750 kUseMuonfilter = kFALSE;
751 }
752 if(!iJETAN){
753 iPWG4JetSpectrum = iPWG4UE = iPWG4ThreeJets = iDIJETAN = 0;
754 }
755 }
9f77f0ce 756 iPWG4JetTasks = iPWG4JetServices||iPWG4JetSpectrum||iPWG4UE||iPWG4PtQAMC||iPWG4PtSpectra||iPWG4PtQATPC||iPWG4ThreeJets||iPWG4JetChem;
d2e6cdd5 757 iPWG4PartCorrLibs = iPWG4PartCorr||iPWG4Tagged||iPWG4CaloQA;
e6993a52 758 iJETANLib = iPWG4JetTasks||iJETAN||iDIJETAN;
c38e3b95 759 if (iESDfilter) {iAODhandler=1;}
760 if (kUseKinefilter && !kUseMC) kUseKinefilter = kFALSE;
761 if (kUseAODTags && !iAODhandler) kUseAODTags = kFALSE;
762
763
764
765}
766
767//______________________________________________________________________________
768Bool_t Connect(const char *mode) {
769// Connect <username> to the back-end system.
770 Int_t imode = -1;
771 if (!strcmp(mode, "LOCAL")) imode = 0;
772 if (!strcmp(mode, "PROOF")) imode = 1;
773 if (!strcmp(mode, "GRID")) imode = 2;
774 TString username = gSystem->Getenv("alien_API_USER");
775 switch (imode) {
776 case 0:
777 break;
778 case 1:
779 if (!username.Length()) {
780 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
781 1. Have called: alien-token-init <username>\n \
782 2. Have called: >source /tmp/gclient_env_$UID");
783 return kFALSE;
784 }
785 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
786 username.Data(), kProofCluster.Data());
787 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
788// TProof::Open(Form("%s@%s:31093", username.Data(), kProofCluster.Data()));
789 TProof::Open(Form("%s@%s", username.Data(), kProofCluster.Data()));
790 if (!gProof) {
791 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
792 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
793 return kFALSE;
794 }
795 if(kProofClearPackages)gProof->ClearPackages();
796
797 if(kProofSaveToAlien){
798 TGrid::Connect("alien://");
799 if (gGrid) {
800 TString homedir = gGrid->GetHomeDirectory();
801 TString workdir = homedir + kTrainName;
802 if (!gGrid->Cd(workdir)) {
803 gGrid->Cd(homedir);
804 if (gGrid->Mkdir(workdir)) {
805 gGrid->Cd(kTrainName);
806 ::Info("AnalysisTrainPWG4Jets::Connect()", "Directory %s created", gGrid->Pwd());
807 }
808 }
809 gGrid->Mkdir("proof_output");
810 gGrid->Cd("proof_output");
811 kProofOutdir = Form("alien://%s", gGrid->Pwd());
812 }
813 }
814 break;
815 case 2:
816 if (!username.Length()) {
817 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
818 1. Have called: alien-token-init <username>\n \
819 2. Have called: >source /tmp/gclient_env_$UID");
820 return kFALSE;
821 }
822 if (kPluginUse && !gSystem->Getenv("alien_CLOSE_SE")) {
823 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode),
824 "When using the AliEn plugin it is preferable to define the \
825 variable alien_CLOSE_SE in your environment.");
826 return kFALSE;
827 }
828 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to AliEn ...",
829 username.Data());
830 TGrid::Connect("alien://");
831 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
832 break;
833 default:
834 ::Error("AnalysisTrainPWG4Jets.C::Connect", "Unknown run mode: %s", mode);
835 return kFALSE;
836 }
837 ::Info("AnalysisTrainPWG4Jets.C::Connect","Connected in %s mode", mode);
838 return kTRUE;
839}
840
841//______________________________________________________________________________
842Bool_t LoadCommonLibraries(const char *mode)
843{
844// Load common analysis libraries.
845 Int_t imode = -1;
846 if (!strcmp(mode, "LOCAL")) imode = 0;
847 if (!strcmp(mode, "PROOF")) imode = 1;
848 if (!strcmp(mode, "GRID")) imode = 2;
849 if (!gSystem->Getenv("ALICE_ROOT")) {
850 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Analysis train requires that analysis libraries are compiled with a local AliRoot");
851 return kFALSE;
852 }
853 Bool_t success = kTRUE;
854 // ROOT libraries
855 gSystem->Load("libTree.so");
856 gSystem->Load("libGeom.so");
857 gSystem->Load("libVMC.so");
858 gSystem->Load("libPhysics.so");
859
860 // Load framework classes. Par option ignored here.
861 switch (imode) {
862 case 0:
863 case 2:
864 if (kUseCPAR) {
865 success &= LoadLibrary("STEERBase", mode, kTRUE);
866 success &= LoadLibrary("ESD", mode, kTRUE);
867 success &= LoadLibrary("AOD", mode, kTRUE);
868 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
869 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
870 success &= LoadLibrary("CORRFW", mode, kTRUE);
871 } else {
872 success &= LoadLibrary("libSTEERBase.so", mode);
873 success &= LoadLibrary("libESD.so", mode);
874 success &= LoadLibrary("libAOD.so", mode);
875 success &= LoadLibrary("libANALYSIS.so", mode);
876 success &= LoadLibrary("libANALYSISalice.so", mode);
877 success &= LoadLibrary("libCORRFW.so", mode);
878 gROOT->ProcessLine(".include $ALICE_ROOT/include");
879 }
880 break;
881 case 1:
882 Int_t ires = -1;
883 if (kProofUseAFPAR && !gSystem->AccessPathName(kProofAFversion)) ires = gProof->UploadPackage(kProofAFversion);
884 if (ires < 0) {
885 success &= LoadLibrary("STEERBase", mode);
886 success &= LoadLibrary("ESD", mode);
887 success &= LoadLibrary("AOD", mode);
888 success &= LoadLibrary("ANALYSIS", mode);
889 success &= LoadLibrary("ANALYSISalice", mode);
890 success &= LoadLibrary("CORRFW", mode);
891 } else {
892 ires = gProof->EnablePackage(kProofAFversion);
893 if (ires<0) success = kFALSE;
894 success &= LoadLibrary("CORRFW", mode);
895 }
896 break;
897 default:
898 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
899 return kFALSE;
900 }
901 if (success) {
902 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
903 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
904 gSystem->GetIncludePath());
905 } else {
906 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: FAILED");
907 }
908
909 return success;
910}
911
912//______________________________________________________________________________
913Bool_t LoadAnalysisLibraries(const char *mode)
914{
915// Load common analysis libraries.
916 Bool_t success = kTRUE;
917 if (iESDfilter) {
918 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
919 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
920 }
921 // JETAN
e6993a52 922 if (iJETANLib) {
b53f2e4f 923 // this part needs some rework in case we do not need the fastjed finders for processing
924 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
c38e3b95 925 if (!strcmp(mode, "PROOF")){
ef1e462f 926 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libCGAL.so\"\)", kTRUE);
c38e3b95 927 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libfastjet.so\"\)", kTRUE);
928 // problem when loading siscone copiled with different gcc version??
929 // gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libsiscone.so\"\)", kTRUE);
930 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libSISConePlugin.so\"\)", kTRUE);
931 }
b53f2e4f 932 if(!kUsePAR){
e84da0a5 933 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
934 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
935 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
936 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
937 }
938 else{
939 // par files plus FASTJET needs some extra work... need to change
940 // the loading sequence in the auto generated .C file
941 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
942 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
943 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
944 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
945 }
c38e3b95 946 if (!LoadLibrary("FASTJETAN", mode, kTRUE)) return kFALSE;
947 }
948 if(iPWG4JetTasks){
949 // PWG4 particle correlations
950 if (!LoadLibrary("PWG4JetTasks", mode, kTRUE)) return kFALSE;
951 }
952 if(iPWG1QASym){
99bfd7f7 953 if (!LoadSource(Form("%s/PWG1/AliAnalysisTaskQASym.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
c38e3b95 954 }
121e4bd5 955 if(iPWG4TmpSourceSara){
c166d299 956 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
121e4bd5 957 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskEta.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
958 }
c166d299 959 if(iPWG4TmpSourceFrag){
960 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
961 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskFragFunc.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
962 }
9f77f0ce 963
964 /*
965 if(iPWG4JetChem){
c580ebbb 966 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
967 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskJetChem.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
968 }
9f77f0ce 969 */
c166d299 970
911a740f 971 if (iPWG4PartCorrLibs) {
c38e3b95 972 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
973 !LoadLibrary("PHOSUtils", mode, kTRUE) ||
974 !LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
975 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
976 }
d2e6cdd5 977 if (iPWG4JetCorr) {
978 if (!LoadLibrary("PWG4JetCorrel", mode, kTRUE)) return kFALSE;
979 }
121e4bd5 980 if (iPWG4omega3pi) {
981 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
982 }
53c63663 983 if (iPWG4GammaConv) {
984 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
985 }
c38e3b95 986
987 ::Info("AnalysisTrainPWG4Jets.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
988 return kTRUE;
989}
990
991//______________________________________________________________________________
992Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
993{
994// Load a module library in a given mode. Reports success.
995 Int_t imode = -1;
996 Int_t result;
997 TString smodule(module);
998 if (!strcmp(mode, "LOCAL")) imode = 0;
999 if (!strcmp(mode, "PROOF")) imode = 1;
1000 if (!strcmp(mode, "GRID")) imode = 2;
1001 TString mod(module);
1002 if (!mod.Length()) {
1003 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Empty module name");
1004 return kFALSE;
1005 }
1006 // If a library is specified, just load it
1007 if (smodule.EndsWith(".so")) {
1008 mod.Remove(mod.Index(".so"));
1009 result = gSystem->Load(mod);
1010 if (result < 0) {
1011 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load library %s", module);
1012 return kFALSE;
1013 }
1014 if (rec) anaLibs += Form("%s.so ",mod.Data());
e84da0a5 1015 if (rec) anaLibsExtra += Form("%s.so ",mod.Data());
c38e3b95 1016 return kTRUE;
1017 }
1018 // Check if the library is already loaded
1019 if (strlen(gSystem->GetLibraries(Form("%s.so", module), "", kFALSE)) > 0)
1020 return kTRUE;
1021 switch (imode) {
1022 case 0:
1023 case 2:
1024 if (kUsePAR) {
1025 result = SetupPar(module);
1026 if (rec) anaPars += Form("%s.par ", module);
1027 } else {
1028 result = gSystem->Load(Form("lib%s.so", module));
1029 if (rec) anaLibs += Form("lib%s.so ", module);
1030 }
1031 break;
1032 case 1:
1033 if(!gSystem->AccessPathName(module)){
1034 ::Info("AnalysisTrainPWG4Jets.C::LoadLibrary", "Removing directory %s",module);
1035 gSystem->Exec(Form("rm -rf %s",module));
1036 }
1037 result = gProof->UploadPackage(module);
1038 if (result<0) {
1039 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
1040 if (result<0) {
1041 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
1042 return kFALSE;
1043 }
1044 }
1045 result = gProof->EnablePackage(module);
1046 break;
1047 default:
1048 return kFALSE;
1049 }
1050 if (result < 0) {
1051 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load module %s", module);
1052 return kFALSE;
1053 }
1054 return kTRUE;
1055}
1056
1057
1058
1059//______________________________________________________________________________
1060Bool_t LoadSource(const char *source, const char *mode, Bool_t rec=kFALSE)
1061{
1062// Load a module library in a given mode. Reports success.
1063 Int_t imode = -1;
1064 Int_t result = -1;
1065 if (!strcmp(mode, "LOCAL")) imode = 0;
1066 if (!strcmp(mode, "PROOF")) imode = 1;
1067 if (!strcmp(mode, "GRID")) imode = 2;
1068 TString ssource(source);
1069 TString basename = gSystem->BaseName(ssource.Data());
1070 if (!ssource.Length()) {
1071 ::Error("AnalysisTrainPWG4Jets.C::LoadSource", "Empty task name");
1072 return kFALSE;
1073 }
1074 // we have a source code so compile it
1075 if (ssource.EndsWith(".cxx")) {
1076 // need to copy it here other wise the path is also used on grid...
1077 ssource.Remove(ssource.Index(".cxx"));
1078 basename.Remove(basename.Index(".cxx"));
1079 Printf("LoadSources:: Copying... path %s{cxx,h}",ssource.Data());
1080 gSystem->Exec(Form("cp %s.cxx . ",ssource.Data()));
1081 gSystem->Exec(Form("cp %s.h . ",ssource.Data()));
1082 // Path to code
1083 // only needed for local compilation, in grid and proof mode
1084 // the task headers are uploaded
1085 // path.Remove(path.Index(gSystem->BaseName(path.Data())));
1086 // Printf("LoadSources:: Including path %s",path.Data());
1087 // if(path.Length()>0)gROOT->ProcessLine(Form(".include %s",path.Data()));
1088 Printf("LoadSources:: Loading... path %s",basename.Data());
1089 switch (imode) {
1090 case 0:
b53f2e4f 1091 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1092 break;
1093 case 1:
b53f2e4f 1094 result = gProof->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1095 break;
1096 case 2:
b53f2e4f 1097 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1098 if (rec){
1099 // what we want to compile
1100 anaSources += Form("%s.cxx ",basename.Data());
1101 // what we need as input...
1102 anaLibs += Form("%s.cxx %s.h ",basename.Data(),basename.Data());
1103 }
1104 break;
1105 default:
1106 return kFALSE;
1107 }
1108 }
1109 if (result < 0) {
1110 ::Error("AnalysisTrainPWG4Jets.C::LoadSources", "Could not load source %s", source);
1111 return kFALSE;
1112 }
1113 return kTRUE;
1114}
1115
1116
1117//______________________________________________________________________________
1118TChain *CreateChain(const char *mode, const char *plugin_mode)
1119{
1120// Create the input chain
1121 Int_t imode = -1;
1122 if (!strcmp(mode, "LOCAL")) imode = 0;
1123 if (!strcmp(mode, "PROOF")) imode = 1;
1124 if (!strcmp(mode, "GRID")) imode = 2;
1125 TChain *chain = NULL;
1126 // Local chain
1127 switch (imode) {
1128 case 0:
1129 if (iAODanalysis) {
1130 if (!kLocalXMLDataset.Length()) {
1131 // Local AOD
1132 chain = new TChain("aodTree");
1133 TString line;
1134 ifstream in;
1135 in.open(kLocalDataList.Data());
1136 while (in.good()) {
1137 in >> line;
1138 if (line.Length() == 0) continue;
1139 // cout << " line = " << line << endl;
1140 chain->Add(line.Data());
1141 }
1142 } else {
1143 // Interactive AOD
1144 chain = CreateChainSingle(kLocalXMLDataset, "aodTree");
1145 }
1146 } else {
1147 if (!kLocalXMLDataset.Length()) {
1148 // Local ESD
1149 chain = new TChain("esdTree");
1150 TString line;
1151 ifstream in;
1152 in.open(kLocalDataList.Data());
1153 while (in.good()) {
1154 in >> line;
1155 if (line.Length() == 0) continue;
1156 cout << " line = " << line << endl;
1157 chain->Add(line.Data());
1158 }
1159 } else {
1160 // Interactive ESD
1161 chain = CreateChainSingle(kLocalXMLDataset, "esdTree");
1162 }
1163 }
1164 break;
1165 case 1:
1166 break;
1167 case 2:
1168 if (kPluginUse) {
1169// AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1170// AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1171 } else {
1172 TString treeName = "esdTree";
1173 if (iAODanalysis) treeName = "aodTree";
1174 chain = CreateChainSingle("wn.xml", treeName);
1175 }
1176 break;
1177 default:
1178 }
1179 if (chain && chain->GetNtrees()) return chain;
1180 return NULL;
1181}
1182
1183//______________________________________________________________________________
1184TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
1185{
1186 printf("*******************************\n");
1187 printf("*** Getting the ESD Chain ***\n");
1188 printf("*******************************\n");
1189 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
1190
1191 if (!myCollection) {
1192 ::Error("AnalysisTrainPWG4Jets.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
1193 return NULL ;
1194 }
1195
1196 TChain* chain = new TChain(treeName);
1197 myCollection->Reset() ;
1198 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
1199 chain->ls();
1200 return chain;
1201}
1202
1203//______________________________________________________________________________
1204Int_t SetupPar(char* pararchivename)
1205{
1206 if (!pararchivename || !strlen(pararchivename)) return -1;
1207 char processline[1024];
1208 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
1209 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
1210 ::Info("AnalysisTrainPWG4Jets.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
1211 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
1212 Form("%s.par",pararchivename));
1213 } else {
1214 ::Error("AnalysisTrainPWG4Jets.C::SetupPar", "Cannot find %s.par", pararchivename);
1215 return -1;
1216 }
1217 }
1218 if (kPluginUse && kSaveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, kTrainName.Data()));
1219 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
1220
1221 TString ocwd = gSystem->WorkingDirectory();
1222 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
1223
1224 // check for BUILD.sh and execute
1225 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
1226 printf("*******************************\n");
1227 printf("*** Building PAR archive ***\n");
1228 printf("*******************************\n");
1229 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
1230 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
1231 return -1;
1232 }
1233 }
1234
1235 // check for SETUP.C and execute
1236 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
1237 printf("*******************************\n");
1238 printf("*** Setup PAR archive ***\n");
1239 printf("*******************************\n");
1240 gROOT->Macro("PROOF-INF/SETUP.C");
1241 }
1242 if (!gSystem->ChangeDirectory(ocwd.Data())) return -1;
1243 return 0;
1244}
1245
1246//______________________________________________________________________________
1247AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
1248{
1249// Check if user has a valid token, otherwise make one. This has limitations.
1250// One can always follow the standard procedure of calling alien-token-init then
1251// source /tmp/gclient_env_$UID in the current shell.
1252 if (!AliAnalysisGrid::CreateToken()) return NULL;
1253 AliAnalysisAlien *plugin = new AliAnalysisAlien();
1254// Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
1255 plugin->SetRunMode(plugin_mode);
1256 if (kPluginUseProductionMode) plugin->SetProductionMode();
1257 plugin->SetJobTag(kJobTag);
1258 plugin->SetNtestFiles(2);
1259// plugin->SetPreferedSE("ALICE::NIHAM::File");
1260// Set versions of used packages
e84da0a5 1261 plugin->SetAPIVersion("V1.1x");
1262 // plugin->SetAPIVersion("V1.0x");
1263// plugin->SetAPIVersion("V2.4");
c38e3b95 1264 plugin->SetROOTVersion(kPluginRootVersion);
1265 plugin->SetAliROOTVersion(kPluginAliRootVersion);
1266// Declare input data to be processed.
1267// Method 1: Create automatically XML collections using alien 'find' command.
1268// Define production directory LFN
1269 plugin->SetGridDataDir(kGridDatadir.Data());
1270// Set data search pattern
1271 if (iAODanalysis) plugin->SetDataPattern(" *AliAOD.root");
1272 else plugin->SetDataPattern(Form(" %s/*/*ESD.tag.root",kGridPassPattern.Data()));
1273// ...then add run numbers to be considered
1274// plugin->SetRunRange(kGridRunRange[0], kGridRunRange[1]);
1275 for (Int_t i=kGridRunRange[0]; i<=kGridRunRange[1]; i++) {
1276 Printf("AnalysisTrainPWG4Jets Adding run number %s", Form(kGridRunPattern.Data(),i));
1277 plugin->AddRunNumber(Form(kGridRunPattern.Data(),i));
1278 }
1279
1280 if(kGridLocalRunList.Length()>0){
1281 ifstream in1;
1282 in1.open(kGridLocalRunList.Data());
1283 int iRun;
9a5c5b1e 1284
1285 /*
e84da0a5 1286 char c;
1287 char cLine[250];
1288 while(!in1.eof()){
1289 c = in1.get();
1290 if ( (c >= '0') && (c <= '9') )
1291 {
1292 in1.putback (c);
1293 in1>>iRun;
1294 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1295 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1296 }
1297 else
1298 {
1299 in1.putback (c);
1300 in1.getline(cLine,250);
9a5c5b1e 1301
1302 }
1303 }
1304 */
1305
1306 // just use run numbers, negatives will be excluded
1307 while(in1>>iRun){
1308 if(iRun>0){
1309 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1310 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1311 }
1312 else{
1313 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d", iRun);
e84da0a5 1314 }
c38e3b95 1315 }
1316 }
1317
1318// Method 2: Declare existing data files (raw collections, xml collections, root file)
1319// If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
1320// XML collections added via this method can be combined with the first method if
1321// the content is compatible (using or not tags)
1322// plugin->AddDataFile("tag.xml");
1323// plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
1324// Define alien work directory where all files will be copied. Relative to alien $HOME.
3878a941 1325 TString alien_workdir = "";
1326
1327 if (iAODanalysis) alien_workdir += "analysisAOD";
1328 else alien_workdir += "analysisESD";
1329 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1330 plugin->SetGridWorkingDir(alien_workdir.Data());
1331
c38e3b95 1332 // Declare alien output directory. Relative to working directory.
1333 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1334 plugin->SetGridOutputDir(kGridOutdir);
1335
1336 // Add external packages
1337 if (iJETAN||iDIJETAN) {
1338 plugin->AddExternalPackage("boost::v1_38_0");
1339 plugin->AddExternalPackage("cgal::v3.3.1");
1340 plugin->AddExternalPackage("fastjet::v2.4.0");
1341 }
1342
1343
1344 // set extra libs before par file compilation
1345 anaLibs += kGridExtraFiles;
1346 anaLibs = anaLibs.Strip();
e84da0a5 1347 Printf("anaLibs %s",anaLibs.Data());
1348 Printf("anaLibsExtra %s",anaLibsExtra.Data());
1349
1350 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs.Data());
1351 if (anaLibsExtra.Length()) plugin->SetAdditionalRootLibs(anaLibsExtra.Data());
c38e3b95 1352
1353 TString ana_sources = "";
1354 TString ana_add = "";
1355 if (kUsePAR && anaPars.Length()) {
1356 printf("%s\n", anaPars.Data());
1357 TObjArray *arr;
1358 TObjString *objstr;
1359 arr = anaPars.Tokenize(" ");
1360 TIter next(arr);
1361 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
1362 delete arr;
1363 }
1364
1365// Declare the analysis source files names separated by blancs. To be compiled runtime
1366// using ACLiC on the worker nodes.
1367 ana_sources = anaSources.Strip();
1368// Declare all libraries (other than the default ones for the framework. These will be
1369// loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
1370
1371 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
1372 plugin->SetExecutableCommand(kPluginExecutableCommand.Data());
1373// Declare the output file names separated by blancs.
1374// (can be like: file.root or file.root@ALICE::Niham::File)
1375 plugin->SetDefaultOutputs();
1376 plugin->SetMergeExcludes(kGridMergeExclude);
1377 plugin->SetMaxMergeFiles(kGridMaxMergeFiles);
1378 plugin->SetNrunsPerMaster(kGridRunsPerMaster);
9a5c5b1e 1379 plugin->SetMergeViaJDL(kPluginMergeViaJDL);
1380// Use fastread option
1381 plugin->SetFastReadOption(kPluginFastReadOption);
1382// UseOverwrite mode
1383 plugin->SetOverwriteMode(kPluginOverwriteMode);
c38e3b95 1384// Optionally define the files to be archived.
1385// plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
1386
1387
1388 // Put default output files to archive
1389 TString listhists = "";
1390 TString listaods = "";
1391 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1392 TIter next(mgr->GetOutputs());
1393 AliAnalysisDataContainer *output;
1394 while ((output=(AliAnalysisDataContainer*)next())) {
1395 const char *filename = output->GetFileName();
1396 if (!(strcmp(filename, "default"))) {
53c63663 1397 if (!mgr->GetOutputEventHandler()) continue;
c38e3b95 1398 filename = mgr->GetOutputEventHandler()->GetOutputFileName();
e84da0a5 1399 if (listaods.Length()) listaods += " ";
c38e3b95 1400 listaods += filename;
c38e3b95 1401 } else {
e84da0a5 1402 if(!listhists.Contains(filename)){
1403 if (listhists.Length()) listhists += " ";
c38e3b95 1404 listhists += filename;
1405 }
1406 }
1407 }
53c63663 1408
c28abe00 1409 if(kUseSysInfo>0){
e84da0a5 1410 if (listhists.Length()) listhists += " ";
c28abe00 1411 listhists += "syswatch.root";
53c63663 1412 }
1413
e84da0a5 1414 if(kIsMC){
1415 if (listaods.Length()) listaods += " ";
1416 listaods += "pyxsec_hists.root";
1417 }
1418
1419
53c63663 1420 if (mgr->GetExtraFiles().Length()) {
e84da0a5 1421 if (listaods.Length()) listaods += " ";
53c63663 1422 listaods += mgr->GetExtraFiles();
c38e3b95 1423 }
53c63663 1424
1425 // if we do not fill the aod we do not need to store it
e84da0a5 1426 kGridMergeExclude = listaods;
1427
1428 if(!kFillAOD){
1429 listaods="";
1430 plugin->SetDefaultOutputs(kFALSE);
1431 plugin->SetOutputFiles(listhists.Data());
1432 }
53c63663 1433
e84da0a5 1434
1435 listaods.ReplaceAll(" ", ",");
1436 listhists.ReplaceAll(" ", ",");
c38e3b95 1437 if (listhists.Length()) listhists = Form("hist_archive.zip:%s@%s", listhists.Data(), kGridOutputStorages.Data());;
1438 if (listaods.Length()) listaods = Form("aod_archive.zip:%s@%s", listaods.Data(), kGridOutputStorages.Data());;
53c63663 1439
c38e3b95 1440 if (!listhists.Length() && !listaods.Length()) {
1441 ::Fatal("AnalysisTrainPWG4Jets", "No task output !");
1442 }
53c63663 1443
e84da0a5 1444
53c63663 1445
b2d64ef3 1446 TString outputArchive = "log_archive.zip:stdout,stderr@ALICE::FZK::SE,ALICE::GSI::SE";
1447 if(kUseSysInfo>0)outputArchive = "log_archive.zip:stdout,stderr,syswatch.log@ALICE::FZK::SE,ALICE::GSI::SE";
c38e3b95 1448 if (listaods.Length()) {
1449 outputArchive += " ";
1450 outputArchive += listaods;
1451 }
1452 if (listhists.Length()) {
1453 outputArchive += " ";
1454 outputArchive += listhists;
1455 }
1456 plugin->SetOutputArchive(outputArchive);
1457// Optionally set a name for the generated analysis macro (default MyAnalysis.C)
1458 plugin->SetAnalysisMacro(Form("%s.C", kTrainName.Data()));
1459// Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
1460 plugin->SetSplitMaxInputFileNumber(kGridFilesPerJob);
1461// Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
1462// plugin->SetMaxInitFailed(5);
1463// Optionally resubmit threshold.
1464// plugin->SetMasterResubmitThreshold(90);
1465// Optionally set time to live (default 30000 sec)
1466 plugin->SetTTL(30000);
1467// Optionally set input format (default xml-single)
1468 plugin->SetInputFormat("xml-single");
1469// Optionally modify the name of the generated JDL (default analysis.jdl)
1470 plugin->SetJDLName(Form("%s.jdl", kTrainName.Data()));
1471// Optionally modify the executable name (default analysis.sh)
1472 plugin->SetExecutable(Form("%s.sh", kTrainName.Data()));
1473// Optionally modify job price (default 1)
1474 plugin->SetPrice(1);
1475// Optionally modify split mode (default 'se')
1476 plugin->SetSplitMode("se");
1477 return plugin;
1478}
1479
1480//______________________________________________________________________________
1481void WriteConfig()
1482{
1483// Write train configuration in a file. The file name has the format:
1484// train_[trainName]_ddMonthyyyy_time.C
1485 if (kUseDate) {
1486 gSystem->Exec("date +%d%b%Y_%Hh%M > date.tmp");
1487 ifstream fdate("date.tmp");
1488 if (!fdate.is_open()) {
1489 ::Error("AnalysisTrainPWG4Jets.C::Export","Could not generate file name");
1490 return;
1491 }
1492 const char date[64];
1493 fdate.getline(date,64);
1494 fdate.close();
1495 gSystem->Exec("rm date.tmp");
1496 kTrainName = Form("train_%s_%s", kTrainName.Data(), date);
1497 } else {
1498 kTrainName = Form("train_%s", kTrainName.Data());
1499 }
1500 TString cdir = gSystem->WorkingDirectory();
1501 gSystem->MakeDirectory(kTrainName);
1502 gSystem->ChangeDirectory(kTrainName);
1503 ofstream out;
1504 out.open(Form("%sConfig.C",kTrainName.Data()), ios::out);
1505 if (out.bad()) {
1506 ::Error("AnalysisTrainPWG4Jets.C::Export", "Cannot open ConfigTrain.C for writing");
1507 return;
1508 }
1509 out << "{" << endl;
1510 out << " kTrainName = " << "\"" << kTrainName.Data() << "\";" << endl;
1511 out << " kProofCluster = " << "\"" << kProofCluster.Data() << "\";" << endl;
1512 out << " kProofUseAFPAR = " << kProofUseAFPAR << ";" << endl;
1513 if (kProofUseAFPAR)
1514 out << " kProofAFversion = " << kProofAFversion.Data() << ";" << endl;
1515 out << " kProofDataSet = " << "\"" << kProofDataSet.Data() << "\";" << endl;
1516 out << " kPluginUse = " << kPluginUse << ";" << endl;
1517 out << " kUsePAR = " << kUsePAR << ";" << endl;
1518 out << " kUseCPAR = " << kUseCPAR << ";" << endl;
1519 out << " kPluginRootVersion = " << "\"" << kPluginRootVersion.Data() << "\";" << endl;
1520 out << " kPluginAliRootVersion = " << "\"" << kPluginAliRootVersion.Data() << "\";" << endl;
1521 out << " kGridDatadir = " << "\"" << kGridDatadir.Data() << "\";" << endl;
1522 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1523 out << " kGridOutdir = " << "\"" << kGridOutdir.Data() << "\";" << endl;
1524 out << " kGridMaxMergeFiles = " << kGridMaxMergeFiles << ";" << endl;
1525 out << " kGridMergeExclude = " << "\"" << kGridMergeExclude.Data() << "\";" << endl;
1526 out << " kGridRunsPerMaster = " << kGridRunsPerMaster << ";" << endl;
1527 out << " kGridFilesPerJob = " << kGridFilesPerJob << ";" << endl;
1528 out << " kGridRunRange[0] = " << kGridRunRange[0] << ";" << endl;
1529 out << " kGridRunRange[1] = " << kGridRunRange[1] << ";" << endl;
1530 out << " kUseDebug = " << kUseDebug << ";" << endl;
1531 out << " kUseMC = " << kUseMC << ";" << endl;
1532 out << " kUseESDTags = " << kUseESDTags << ";" << endl;
1533 out << " kUseKinefilter = " << kUseKinefilter << ";" << endl;
1534 out << " kUseTR = " << kUseTR << ";" << endl;
1535 out << " kUseAODTags = " << kUseAODTags << ";" << endl;
1536 out << " kSaveTrain = " << "kFALSE;" << endl << endl;
1537 out << " // Analysis modules" << endl;
1538 out << " iAODanalysis = " << iAODanalysis << ";" << endl;
1539 out << " iAODhandler = " << iAODhandler << ";" << endl;
1540 out << " iESDfilter = " << iESDfilter << ";" << endl;
1541 out << " iJETAN = " << iJETAN << ";" << endl;
1542 out << "// Configuration fot the wagons" << endl;
1543 out << "}" << endl;
1544 ::Info("AnalysisTrainPWG4Jets.C::WriteConfig", "Train configuration wrote to file %s", Form("config_%s.C", kTrainName.Data()));
1545 gSystem->ChangeDirectory(cdir);
1546}
1547
1548//______________________________________________________________________________
1549Bool_t LoadConfig(const char *filename)
1550{
1551// Read train configuration from file
1552 if (gSystem->AccessPathName(filename)) {
1553 ::Error("AnalysisTrainPWG4Jets.C::LoadConfig", "Config file name not found");
1554 return kFALSE;
1555 }
1556 gROOT->ProcessLine(Form(".x %s", filename));
1557 ::Info("AnalysisTrainPWG4Jets.C::LoadConfig", "Train configuration loaded from file %s", filename);
1558 return kTRUE;
1559}
1560
1561Bool_t PatchJDL(){
1562 Printf(">>> Patching JDL");
1563 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1564 AliAnalysisAlien* gridHandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1565 TGridJDL *jdl = gridHandler->GetGridJDL();
1566 if(iJETAN)jdl->AddToPackages("fastjet","v2.4.0");
1567 gridHandler->WriteJDL(kFALSE);
0971dabc 1568 Printf("<<< Patching JDL");
c38e3b95 1569 return kTRUE;
1570}
1571
1572Bool_t PatchAnalysisMacro(){
1573 Printf(">>> Patching AnalysisMacro");
1574 gSystem->Exec(Form("mv %s.C %s.C_tmp",kTrainName.Data(),kTrainName.Data()));
1575
1576 ifstream in1;
1577 in1.open(Form("%s.C_tmp", kTrainName.Data()));
1578 char cLine[250];
1579 TString st;
1580 while(in1.getline(cLine,250)){
1581 st += cLine;
1582 st += "\n";
1583 }
1584 Int_t index;
1585 index = st.Index("gSystem->Load(\"libPhysics\");");
1586 index += strlen("gSystem->Load(\"libPhysics\");");
e84da0a5 1587 if(iJETAN&&kUsePAR){
c38e3b95 1588 TObjArray *arr;
1589 TObjString *objstr;
1590 arr = anaLibs.Tokenize(" ");
1591 TIter next(arr);
1592 TString add = "";
1593 add += "\n\n // added by CKB \n";
1594 while ((objstr=(TObjString*)next())){
e84da0a5 1595 if(objstr->GetString().Contains("PWG3"))continue;
c38e3b95 1596 if(objstr->GetString().EndsWith(".so"))add += Form("gSystem->Load(\"%s\");\n",objstr->GetString().Data());
1597 }
1598 delete arr;
3878a941 1599 // add += Form("AliLog::SetGlobalLogLevel(%d);\n",AliLog::GetGlobalLogLevel());
c38e3b95 1600 add += "// BKC \n\n";
1601 st.Insert(index,add.Data());
1602 }
e84da0a5 1603
1604 if(kUseDebug){
1605 st.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
1606 }
1607
c166d299 1608 index = st.Index("gSystem->AddIncludePath");
1609 st.Insert(index,"// CKB ");
1610
c38e3b95 1611 ofstream out;
1612 out.open(Form("%s.C", kTrainName.Data()));
1613 if (out.bad()) {
1614 return kFALSE;
1615 }
1616 out << st << endl;
1617 Printf("<<< Patching AnalysisMacro");
1618 return kTRUE;
1619
1620}