Write Calo QA output to a separate file
[u/mrichter/AliRoot.git] / PWG4 / macros / AnalysisTrainPWG4Jets.C
CommitLineData
c38e3b95 1//===================== ANALYSIS TRAIN =========================================
2// To use: copy this macro to your work directory, modify the global part to match
3// your needs, then run root.
4// root[0] .L AnalysisTrain.C
5// Grid full mode as below (other modes: test, offline, submit, terminate)
121e4bd5 6// root[1] AnalysisTrainPWG-244Jets("grid", "full")
c38e3b95 7// CAF mode (requires root v5-23-02 + aliroot v4-16-Rev08)
8// root[2] AnalysisTrainPWG4Jets("proof")
9// Local mode requires AliESds.root or AliAOD.root in ./data directory
10// root[3] AnalysisTrainPWG4Jets("local")
11// In proof and grid modes, a token is needed and sourcing the produced environment file.
12//
13// If 'saveTrain' flag is set, the train will generate a directory name and run
14// in this directory. A configuration file 'ConfigTrain.C' will be generated.
15// One can replay at any time the train via:
16// root[1] AnalysisTrainPWG4Jets(ana_mode, plugin_mode, "train_default_<date>/ConfigTrain.C")
17
18// For Usage with fastjet run in "offline" first and then "submit"
19// jdl and analysismacro are automatically patched after "offline" mode
20
21// =============================================================================
22// ### General Steering variables
23// =============================================================================
24//== general setup variables
25TString kTrainName = "testAnalysis"; // *CHANGE ME* (no blancs or special characters)
26TString kJobTag = "PWG4 Jet Tasks analysis train configured"; // *CHANGE ME*
27
28// Usage of par files ONLY in grid mode and ONLY if the code is not available
29// in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
30// To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
31// AliRoot.
32Bool_t kUsePAR = kFALSE; // use par files for extra libs
33Bool_t kUseCPAR = kFALSE; // use par files for common libs
34Bool_t kFillAOD = kFALSE; // switch of AOD filling for on the fly analysis
4721d8c5 35Int_t kSaveAOD = 8; // Bit switch 1 = Full AOD 2 = Jet AOD , 4 = PartCorr, 8 = JCORRAN
c38e3b95 36//== general input and output variables
9a5c5b1e 37
c38e3b95 38Int_t iAODanalysis = 1; // Analysis on input AOD's
39Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
40Int_t iESDfilter = 0; // ESD to AOD filter (barrel + muon tracks)
e84da0a5 41Int_t iPhysicsSelection = 1; // ESD to AOD filter (barrel + muon tracks)
c38e3b95 42Bool_t kUseKinefilter = kFALSE; // use Kinematics filter
43Bool_t kUseMuonfilter = kFALSE; // use Kinematics filter
44TString kCommonOutputFileName = "PWG4_JetTasksOutput.root";
9748e967 45TString kCaloQAOutputFileName = "PWG4_CaloQAOutput.root";
c38e3b95 46
47
48//== general process variables
49
50// ### Other flags to steer the analysis
51//==============================================================================
9a5c5b1e 52Bool_t kSkipTerminate = kTRUE; // Do not call Teminate
c38e3b95 53Bool_t kUseDate = kFALSE; // use date in train name
54Bool_t kUseDebug = kTRUE; // activate debugging
46534866 55Int_t kErrorIgnoreLevel = -1; // takes the errror print level from .rootrc
56// From TError.h:
57// const Int_t kUnset = -1;
58// const Int_t kPrint = 0;
59// const Int_t kInfo = 1000;
60// const Int_t kWarning = 2000;
61// const Int_t kError = 3000;
62// const Int_t kBreak = 4000;
63// const Int_t kSysError = 5000;
64// const Int_t kFatal = 6000;
65Int_t kUseSysInfo = 0; // activate debugging
66Long_t kNumberOfEvents = 1234567890; // number of events to process from the chain
c38e3b95 67Bool_t kUseMC = kTRUE; // use MC info
68Bool_t kIsMC = kTRUE; // is MC info, if false it overwrites Use(AOD)MC
69Bool_t kUseAODMC = kTRUE; // use MC infA
70Bool_t kUseESDTags = kFALSE; // use ESD tags for selection
71Bool_t kUseTR = kFALSE; // use track references
72Bool_t kUseAODTags = kFALSE; // use AOD tags
73Bool_t kSaveTrain = kFALSE; // save train configuration as:
74
9a5c5b1e 75
c38e3b95 76// ### Analysis modules to be included. Some may not be yet fully implemented.
77//==============================================================================
78Int_t iJETAN = 1; // Jet analysis (PWG4) // 1 write standard 2 write non-standard jets, 3 wrtie both
79Int_t iDIJETAN = 1;
e6993a52 80Int_t iJETANLib = 1;
c38e3b95 81Int_t iPWG1QASym = 0; // Eva's QA task compiled on the fly...
82Int_t iPWG4JetTasks = 0; // all jet tasks flag for lib laoding
83Int_t iPWG4JetServices = 0; // jet spectrum analysis
84Int_t iPWG4JetSpectrum = 0; // jet spectrum analysis
58ef946c 85Int_t iPWG4JCORRAN = 0; // JCORRAN module
c38e3b95 86Int_t iPWG4UE = 0; // Underlying Event analysis
9748e967 87Int_t iPWG4CorrectionsUE = 0; // Underlying Event analysis
c166d299 88Int_t iPWG4TmpSourceSara = 0; // Underlying Event analysis not in svn
89Int_t iPWG4TmpSourceFrag = 0; // Bastian's Fragmentation function not in svn
9f77f0ce 90Int_t iPWG4JetChem = 0; // Jet chemistry
c38e3b95 91Int_t iPWG4PtQAMC = 0; // Marta's QA tasks
92Int_t iPWG4PtSpectra = 0; // Marta's QA tasks
93Int_t iPWG4PtQATPC = 0; // Marta's QA tasks
4721d8c5 94Int_t iPWG4Cosmics = 0; // Marta's Cosmics Taks
c38e3b95 95Int_t iPWG4ThreeJets = 0; // Sona's thrust task
b53f2e4f 96Int_t iPWG4KMeans = 0; // Andreas' KMeans task
d2e6cdd5 97Int_t iPWG4Cluster = 0; // CKB cluster task
4721d8c5 98Int_t iEMCUtilLibs = 0; // Flag to satisfy dependence on EMC utils
911a740f 99Int_t iPWG4PartCorrLibs = 0; // Gustavo's part corr analysis
c38e3b95 100Int_t iPWG4PartCorr = 0; // Gustavo's part corr analysis
d2e6cdd5 101Int_t iPWG4CaloQA = 0; // Gustavo's part corr analysis
102Int_t iPWG4JetCorr = 0; // Paul's jet corr analysis
911a740f 103Int_t iPWG4Tagged = 0; // Gustavo's part corr analysis
121e4bd5 104Int_t iPWG4omega3pi = 0; // Omega to 3 pi analysis (PWG4)
53c63663 105Int_t iPWG4GammaConv = 0; // Gamma Conversio
c38e3b95 106Int_t kHighPtFilterMask = 16; // change depending on the used AOD Filter
e6993a52 107TString kDeltaAODJetName = "AliAOD.Jets.root";
4721d8c5 108TString kDeltaAODJCORRANName = "AliAOD.JCORRAN.root";
53c63663 109TString kDeltaAODPartCorrName = "deltaAODPartCorr.root";
c38e3b95 110
111
112//==============================================================================
113// ### PROOF Steering varibales
114//==============================================================================
115//== proof setup variables
116TString kProofCluster = "alicecaf.cern.ch";
117Bool_t kProofUseAFPAR = kFALSE; // use AF special par file
118TString kProofAFversion = "AF-v4-17";
119//== proof input and output variables
120TString kProofDataSet = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
121Bool_t kProofSaveToAlien = kFALSE; // save proof outputs in AliEn train_[trainName]_ddMonthyyyy_time.C
122TString kProofOutdir = "";
123Bool_t kProofClearPackages = kFALSE;
124Int_t kProofEvents = 10000;
125Int_t kProofOffset = 0;
126//== proof process variables
127
128
129//==============================================================================
130// ### Grid plugin Steering varibiables
131//==============================================================================
132//== grid plugin setup variables
133Bool_t kPluginUse = kTRUE; // do not change
134Bool_t kPluginUseProductionMode = kFALSE; // use the plugin in production mode
23adcac8 135TString kPluginRootVersion = "v5-26-00b-6"; // *CHANGE ME IF MORE RECENT IN GRID*
d3af0232 136TString kPluginAliRootVersion = "v4-19-15-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
9a5c5b1e 137Bool_t kPluginMergeViaJDL = kTRUE; // merge via JDL
138Bool_t kPluginFastReadOption = kFALSE; // use xrootd tweaks
139Bool_t kPluginOverwriteMode = kTRUE; // overwrite existing collections
dc6a7461 140Int_t kPluginOutputToRunNumber = 1; // write the output to subdirs named after run number
c38e3b95 141// TString kPluginExecutableCommand = "root -b -q";
142TString kPluginExecutableCommand = "source /Users/kleinb/setup_32bit_aliroot_trunk_clean_root_trunk.sh; alienroot -b -q ";
9a5c5b1e 143
c38e3b95 144// == grid plugin input and output variables
145TString kGridDatadir = "/alice/sim/PDC_08b/LHC09a1/AOD/";
9748e967 146Int_t kGridMaxRunsFromList = 999999999;
c38e3b95 147TString kGridLocalRunList = "";
148TString kGridOutdir = ""; // AliEn output directory. If blank will become output_<kTrainName>
3878a941 149TString kGridDataSet = ""; // sub working directory not to confuse different run xmls
9748e967 150Int_t kGridRunRange[2] = {0, -1}; // Set the run range
c38e3b95 151TString kGridRunPattern = "%03d"; // important for leading zeroes!!
152TString kGridPassPattern = "";
153TString kGridExtraFiles = ""; // files that will be added to the input list in the JDL...
9748e967 154Int_t kGridMaxMergeFiles = 12; // Number of files merged in a chunk grid run range
c38e3b95 155TString kGridMergeExclude = "AliAOD.root"; // Files that should not be merged
6408fe42 156TString kGridOutputStorages = "disk=2"; // Make replicas on the storages
c38e3b95 157// == grid process variables
c28abe00 158Int_t kGridRunsPerMaster = 100; // Number of runs per master job
e84da0a5 159Int_t kGridFilesPerJob = 100; // Maximum number of files per job (gives size of AOD)
c38e3b95 160
161//==============================================================================
162// ### Local Steering variables
163//==============================================================================
164//== local setup variables
165//== local input and output variables
166TString kLocalXMLDataset = ""; // Change local xml dataset for local interactive analysis
167TString kLocalDataList = "local_deltaaod.txt"; // Change local xml dataset for local interactive analysis
168// == local process variables
169
170
171
172// Temporaries.
173TString anaPars = "";
174TString anaLibs = "";
e84da0a5 175TString anaLibsExtra = "";
c38e3b95 176TString anaSources = "";
177// Function signatures
178class AliAnalysisAlien;
179
180//______________________________________________________________________________
181void AnalysisTrainPWG4Jets(const char *analysis_mode="local",
182 const char *plugin_mode="",
183 const char *config_file="",Int_t iOffset = 0)
184{
185// Main analysis train macro. If a configuration file is provided, all parameters
186// are taken from there but may be altered by CheckModuleFlags.
3878a941 187
c38e3b95 188 if (strlen(config_file) && !LoadConfig(config_file)) return;
3878a941 189
c38e3b95 190 if(iOffset)kProofOffset = iOffset;
191 TString smode(analysis_mode);
192 smode.ToUpper();
193 if (kSaveTrain)WriteConfig();
194 // Check compatibility of selected modules
195 CheckModuleFlags(smode);
e84da0a5 196 // gROOT->ProcessLine(".trace");
c38e3b95 197
198 printf("==================================================================\n");
199 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", kTrainName.Data(),smode.Data());
200 printf("==================================================================\n");
9748e967 201 printf("= Configuring analysis train for: =\n");
c38e3b95 202 if (iAODanalysis) printf("= AOD analysis =\n");
9748e967 203 else printf("= ESD analysis =\n");
204 if (iPhysicsSelection) printf("= Physics selection =\n");
c38e3b95 205 if (iESDfilter) printf("= ESD filter =\n");
206 if (iJETAN) printf("= Jet analysis =\n");
207 printf("==================================================================\n");
9748e967 208
209 char *printMask = ":: %20s %10d\n";
210 printf(printMask,"Fill AOD",(UInt_t)kFillAOD);
211 printf(printMask,"Save AOD", (UInt_t)kSaveAOD);
212 printf(printMask,"MC truth", (UInt_t)kUseMC);
213 printf(printMask,"KINE filter", (UInt_t)kUseKinefilter);
214 printf(printMask,"track refs", (UInt_t)kUseTR);
215 printf(printMask,"tags", (UInt_t)kUseESDTags);
216 printf(printMask,"AOD tags", (UInt_t)kUseAODTags);
217 printf(printMask,"debugging", (UInt_t)kUseDebug);
218 printf(printMask,"PAR files", (UInt_t)kUsePAR);
219 printf(printMask,"AliEn plugin", (UInt_t)kPluginUse);
220 printf(printMask,"PWG1 QA sym", iPWG1QASym);
221 printf(printMask,"PWG4 Source Sara",iPWG4TmpSourceSara);
222 printf(printMask,"PWG4 Source BB",iPWG4TmpSourceFrag);
223 printf(printMask,"PWG4 Jet Chem",iPWG4JetChem);
224 printf(printMask,"PWG4 Jet tasks",iPWG4JetTasks);
225 printf(printMask,"PWG4 Jet Services",iPWG4JetServices);
226 printf(printMask,"PWG4 Jet Spectrum",iPWG4JetSpectrum);
227 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
228 printf(printMask,"PWG4 UE",iPWG4UE);
229 printf(printMask,"PWG4 Corrections UE",iPWG4CorrectionsUE);
230 printf(printMask,"PWG4 Pt QA MC",iPWG4PtQAMC);
231 printf(printMask,"PWG4 Pt Spectra",iPWG4PtSpectra);
232 printf(printMask,"PWG4 Pt QA TPC",iPWG4PtQATPC);
233 printf(printMask,"PWG4 Cosmics",iPWG4Cosmics);
234 printf(printMask,"PWG4 Three Jets",iPWG4ThreeJets);
235 printf(printMask,"PWG4 KMeans",iPWG4KMeans);
236 printf(printMask,"PWG4 Cluster",iPWG4Cluster);
237 printf(printMask,"PWG4 Part Corr",iPWG4PartCorr);
238 printf(printMask,"PWG4 Calo QA",iPWG4CaloQA);
239 printf(printMask,"PWG4 Jet Corr",iPWG4JetCorr);
240 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
241 printf(printMask,"PWG4 Tagged",iPWG4Tagged);
242 printf(printMask,"PWG4 omega to 3 pi ",iPWG4omega3pi);
243 printf(printMask,"PWG4 Gamma Conv",iPWG4GammaConv);
244 printf(printMask,"HighPt FilterMask",kHighPtFilterMask);
3878a941 245
c38e3b95 246 //==========================================================================
247 // Connect to back-end system
248 if (!Connect(smode)) {
249 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
250 return;
251 }
252
253 // Load common libraries and set include path
254 if (!LoadCommonLibraries(smode)) {
255 ::Error("AnalysisTrain", "Could not load common libraries");
256 return;
257 }
3878a941 258
259
c38e3b95 260
261 // Make the analysis manager and connect event handlers
e84da0a5 262 AliAnalysisManager *mgr = new AliAnalysisManager("PWG4Train", "pwg4 mini train");
c38e3b95 263 if (kCommonOutputFileName.Length()>0)mgr->SetCommonFileName(kCommonOutputFileName.Data());
264 if (kProofSaveToAlien) mgr->SetSpecialOutputLocation(kProofOutdir);
4a6f59cb 265 mgr->SetNSysInfo(0);
c38e3b95 266 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
53c63663 267 if (kUseSysInfo)mgr->SetNSysInfo(kUseSysInfo);
9a5c5b1e 268 mgr->SetSkipTerminate(kSkipTerminate);
4a6f59cb 269
c38e3b95 270 // Load analysis specific libraries
271 if (!LoadAnalysisLibraries(smode)) {
272 ::Error("AnalysisTrain", "Could not load analysis libraries");
273 return;
274 }
275
276 // Create input handler (input container created automatically)
277 if (iAODanalysis) {
278 // AOD input handler
279 AliAODInputHandler *aodH = new AliAODInputHandler();
280 mgr->SetInputEventHandler(aodH);
e6993a52 281 if (iPWG4JetTasks) aodH->AddFriend(Form("deltas/%s",kDeltaAODJetName.Data()));
282 if (iPWG4PartCorr) aodH->AddFriend(Form("deltas/%s"kDeltaAODJetName.Data()));
c38e3b95 283 } else {
284 // ESD input handler
285 AliESDInputHandler *esdHandler = new AliESDInputHandler();
286 if (kUseESDTags) esdHandler->SetReadTags();
c166d299 287 esdHandler->SetReadFriends(kFALSE);
c38e3b95 288 mgr->SetInputEventHandler(esdHandler);
4a6f59cb 289 // if(iPWG4PtQATPC&& !kTrainName.Contains("pass5"))esdHandler->SetActiveBranches("ESDfriend");
c166d299 290
c38e3b95 291 }
f4d11ac8 292
c38e3b95 293 // Monte Carlo handler
294 if (kUseMC && !iAODanalysis) {
295 AliMCEventHandler* mcHandler = new AliMCEventHandler();
296 mgr->SetMCtruthEventHandler(mcHandler);
297 mcHandler->SetReadTR(kUseTR);
298 }
299 // AOD output container, created automatically when setting an AOD handler
300 if (iAODhandler) {
301 // AOD output handler
302 AliAODHandler* aodHandler = new AliAODHandler();
303 aodHandler->SetOutputFileName("AliAOD.root");
6408fe42 304 aodHandler->SetFillAODforRun(kFillAOD);
c38e3b95 305
306 mgr->SetOutputEventHandler(aodHandler);
121e4bd5 307 //
c38e3b95 308 if (iAODanalysis) {
309
310 // aodHandler->SetCreateNonStandardAOD();
311 // if (iJETAN)aodHandler->SetOutputFileName(kDeltaAODJetName.Data());
312 }
313 AliAnalysisDataContainer * cout_aod = mgr->GetCommonOutputContainer();
314 cout_aod->SetSpecialOutput();
315 }
316 // Debugging if needed
b03b08a3 317
3878a941 318 if (kUseDebug){
319 mgr->SetDebugLevel(3);
320 }
4721d8c5 321 if(kUseSysInfo>0){
322 mgr->RegisterExtraFile("syswatch.root");
323 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
324 kGridMergeExclude += "syswatch.root";
325 }
b03b08a3 326 else{
327 AliLog::SetGlobalLogLevel(AliLog::kError);
328 }
46534866 329
330
c38e3b95 331 //==========================================================================
332 // Create the chain. In this example it is created only from ALIEN files but
333 // can be done to work in batch or grid mode as well.
334 TChain *chain = CreateChain(smode, plugin_mode);
335
336 //==========================================================================
337 // Load the tasks configuration macros for all wagons. These files are supposed now to be
338 // in the current workdir, but in AliEn they will be in the file catalog,
339 // mapped from AliRoot and pecified in the jdl input list.
340
341 // For now connection to top input container and common AOD output container
342 // is done in this macro, but in future these containers will be connected
343 // from each task configuration macro.
e84da0a5 344 if(iPhysicsSelection && !iAODanalysis){
d2e6cdd5 345 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
d8f81b37 346 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kIsMC,kTRUE,kTRUE); // last flag also adds information on
e84da0a5 347 }
348
c38e3b95 349 if (iESDfilter && !iAODanalysis) {
350 // ESD filter task configuration.
351 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskESDFilter.C");
352 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilter(kUseKinefilter,kUseMuonfilter);
4721d8c5 353 if(kIsMC){
354 mgr->RegisterExtraFile("pyxsec_hists.root");
355 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
356 kGridMergeExclude += "pyxsec_hists.root";
357
358 }
c38e3b95 359 }
360
361 // AOD tags
362 if (kUseAODTags) {
363 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
364 mgr->AddTask(tagTask);
365 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
366 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
367 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
368 mgr->ConnectOutput(tagTask, 1, coutTags);
369 }
370
371 // Jet analysis
372 if (iJETAN) {
373 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJets.C");
374 AliAnalysisTaskJets *taskjets = 0;
375 if(iJETAN&1)taskjets = AddTaskJets(kHighPtFilterMask);
b53f2e4f 376 if(iJETAN&2){
377 UInt_t selection = 0;
17841481 378 if(!kFillAOD) selection = 0xffffff&~(1<<13)&~(1<<5)&~(1<<6);
f2dd0695 379 else selection = 0xffffff&~(1<<13); // selection = 1<<0|1<<1|1<<2|1<<5|1<<6|1<<7|1<<8|1<<9|1<<10|1<<11|1<<12; (DA takes quite long....)
b53f2e4f 380 AddTaskJetsDelta(kDeltaAODJetName.Data(),kHighPtFilterMask,kUseAODMC,selection);
381 }
c38e3b95 382 if (!taskjets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
383 }
384
385 if (iDIJETAN) {
386 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskDiJets.C");
387 AliAnalysisTaskDiJets *taskdijets = 0;
82ebd295 388 if(iDIJETAN&1)taskdijets = AddTaskDiJets();
c38e3b95 389 if (!taskdijets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
82ebd295 390 if(iDIJETAN&2){
391 taskdijets = AddTaskDiJets("jetsAOD_CDF07");
392 taskdijets = AddTaskDiJets("jetsAOD_DA07");
393 taskdijets = AddTaskDiJets("jetsAOD_FASTJET07");
394 taskdijets = AddTaskDiJets("jetsAOD_FASTKT07");
395 taskdijets = AddTaskDiJets("jetsAOD_SISCONE07");
396 taskdijets = AddTaskDiJets("jetsAOD_UA107");
397 }
c38e3b95 398 }
399
c38e3b95 400 if(iPWG1QASym){
5dbdc61f 401 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskQAsym.C");
c38e3b95 402 AliAnalysisTaskQASym *taskQASym = AddTaskQAsym(-1);
403 if (!taskQASym) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQASym cannot run for this train conditions - EXCLUDED");
121e4bd5 404 }
c38e3b95 405
121e4bd5 406
407
408 if(iPWG4TmpSourceSara){
409 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskEta.C");
410 AliAnalysisTaskEta *taskEta = AddTaskEta();
411 if (!taskEta) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskEta cannot run for this train conditions - EXCLUDED");
c38e3b95 412 }
413
c166d299 414 if(iPWG4TmpSourceFrag){
415 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFragFunc.C");
416 UInt_t selection = 1<<2;
417 AliAnalysisTaskFragFunc *taskFrag = AddTaskFragFunc(kHighPtFilterMask, kUseAODMC,iPhysicsSelection, selection);
418 if (!taskFrag) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskFragFunc cannot run for this train conditions - EXCLUDED");
419 }
420
c580ebbb 421
9f77f0ce 422 if(iPWG4JetChem){
423 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetChem.C");
424 AliAnalysisTask *taskChem = AddTaskJetChem();
c580ebbb 425 if (!taskChem) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetChem cannot run for this train conditions - EXCLUDED");
426 }
427
428
c38e3b95 429 if(iPWG4JetServices){
430 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetServices.C");
431 AliAnalysisTaskJetServices *taskjetServ = 0;
432 taskjetServ = AddTaskJetServices();
433 if (!taskjetServ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetServices cannot run for this train conditions - EXCLUDED");
53c63663 434 if(kGridRunRange[0]>0)taskjetServ->SetRunRange(kGridRunRange[0],kGridRunRange[1]);
0971dabc 435 else taskjetServ->SetRunRange(104000,125000);
c28abe00 436 if(!kIsMC) taskjetServ->SetRealData(kTRUE);
dc6a7461 437 taskjetServ->SetUsePhysicsSelection((Bool_t)iPhysicsSelection);
9f77f0ce 438 taskjetServ->SetDebugLevel(0);
c38e3b95 439 }
440
c38e3b95 441 if(iPWG4JetSpectrum){
442 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetSpectrum2.C");
443 AliAnalysisTaskJetSpectrum2 *taskjetSpectrum = 0;
b53f2e4f 444 if(iPWG4JetSpectrum&1){
445 taskjetSpectrum = AddTaskJetSpectrum2("jets","",kHighPtFilterMask,iPhysicsSelection);
e6993a52 446 if(!iAODanalysis){
d3af0232 447 // taskjetSpectrum = AddTaskJetSpectrum2("jets","tracks32",32,iPhysicsSelection); // tmp hack to give it a different name
58ef946c 448 // taskjetSpectrum = AddTaskJetSpectrum2("jets","tracks64",64,iPhysicsSelection);
46534866 449
f2dd0695 450 if(kIsMC){
46534866 451 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC_FASTJET04",kHighPtFilterMask,iPhysicsSelection,
452 AliAnalysisHelperJetTasks::kIsPileUp|AliAnalysisHelperJetTasks::kPhysicsSelection|AliAnalysisHelperJetTasks::kVertexIn);
453 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC_FASTJET04",kHighPtFilterMask,iPhysicsSelection,
9748e967 454 AliAnalysisHelperJetTasks::kIsCosmic|AliAnalysisHelperJetTasks::kPhysicsSelection|AliAnalysisHelperJetTasks::kVertexIn);
455 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC_FASTJET04",kHighPtFilterMask,iPhysicsSelection,
46534866 456 AliAnalysisHelperJetTasks::kNone);
457 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC2_FASTJET04",kHighPtFilterMask,iPhysicsSelection,
458 AliAnalysisHelperJetTasks::kIsPileUp|AliAnalysisHelperJetTasks::kPhysicsSelection|AliAnalysisHelperJetTasks::kVertexIn);
459 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC2_FASTJET04",kHighPtFilterMask,iPhysicsSelection,
460 AliAnalysisHelperJetTasks::kNone);
461
462 }
463 else{
464 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","",kHighPtFilterMask,iPhysicsSelection,
465 AliAnalysisHelperJetTasks::kIsPileUp|AliAnalysisHelperJetTasks::kPhysicsSelection|AliAnalysisHelperJetTasks::kVertexIn);
9748e967 466 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","",kHighPtFilterMask,iPhysicsSelection,
467 AliAnalysisHelperJetTasks::kIsCosmic|AliAnalysisHelperJetTasks::kPhysicsSelection|AliAnalysisHelperJetTasks::kVertexIn);
46534866 468 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","",kHighPtFilterMask,iPhysicsSelection,AliAnalysisHelperJetTasks::kNone);
f2dd0695 469 }
e6993a52 470 }
d2e6cdd5 471 if (!taskjetSpectrum) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetSpectrum2 cannot run for this train conditions - EXCLUDED");
3878a941 472 taskjetSpectrum->SetDebugLevel(1);
b53f2e4f 473 }
d2e6cdd5 474
e6993a52 475 if(iPWG4JetSpectrum&2){
476 UInt_t selection = 0;
477 if(!iAODanalysis) selection = 0xffffff;
478 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
479 AddTaskJetSpectrum2Delta(kHighPtFilterMask,kUseAODMC,iPhysicsSelection,selection);
480 }
c38e3b95 481 }
58ef946c 482 if(iPWG4JCORRAN){
483 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJCORRANTask.C");
4721d8c5 484 AliJCORRANTask* corran = AddTaskJCORRAN(kDeltaAODJCORRANName.Data(),0);
58ef946c 485 if(!corran)::Warning("AnalysisTrainPWG4Jets", "AliJCORRANTask cannot run for this train conditions - EXCLUDED");
4721d8c5 486 else{
487 if(kDeltaAODJCORRANName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJCORRANName.Data());
488 }
58ef946c 489 }
490
c38e3b95 491 if(iPWG4UE){
492 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskUE.C");
493 AliAnalysisTaskUE *taskUE = 0;
494 if(iPWG4UE&1)taskUE = AddTaskUE();
495 if(iPWG4UE&2){
94ee88d4 496 taskUE =AddTaskUE("jetsAOD_CDF04","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
497 taskUE =AddTaskUE("jetsAOD_CDF07","CDF", "LJ", "TRANSV","MSP");
498 taskUE =AddTaskUE("jetsAOD_SISCONE04","CDF", "LJ", "TRANSV","MSP");
499 taskUE =AddTaskUE("jetsAOD_SISCONE07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
500 taskUE =AddTaskUE("jetsAOD_ICDF","CDF","LJ","TRANSV","MSP");
501 taskUE =AddTaskUE("jetsAOD_FASTKT04","CDF", "LJ", "TRANSV","MSP");
502 taskUE =AddTaskUE("jetsAOD_FASTKT07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
58ef946c 503 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta05", "TRANSV","MSP");
504 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta09", "TRANSV","MSP");
c38e3b95 505 }
2bb1f4ca 506
c38e3b95 507 if (!taskUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskUE cannot run for this train conditions - EXCLUDED");
508 }
9748e967 509 if(iPWG4CorrectionsUE){
510 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCorrectionsUE.C");
511 AliAnalysisTaskCorrectionsUE *taskCorrectionsUE = 0;
512 if(iPWG4CorrectionsUE&1)taskCorrectionsUE = AddTaskCorrectionsUE("jetsAOD_NONE","CDF","MP_eta05","TRANSV","MSP",kFALSE);
513 if (!taskCorrectionsUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCorrectionsUE cannot run for this train conditions - EXCLUDED");
514 }
c38e3b95 515
516 if(iPWG4ThreeJets){
517 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskThreeJets.C");
518 AliAnalysisTaskThreeJets *taskThree = AddTaskThreeJets();
519 if(!taskThree)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskThreets cannot run for this train conditions - EXCLUDED");
520 }
c38e3b95 521 if(iPWG4PtQAMC){
522 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQAMC.C");
523 AliPWG4HighPtQAMC *taskQAMC = AddTaskPWG4HighPtQAMC();
524 if (!taskQAMC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQAMC cannot run for this train conditions - EXCLUDED");
525 }
526
527 if(iPWG4PtQATPC){
528 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQATPConly.C");
10295ac3 529 AliPWG4HighPtQATPConly *taskQATPC = 0;
530 if(iPWG4PtQATPC&1)taskQATPC = AddTaskPWG4HighPtQATPConly(1);
531 if(iPWG4PtQATPC&2)taskQATPC = AddTaskPWG4HighPtQATPConly(2);
532
533 if (!taskQATPC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQATPC cannot run for this train conditions - EXCLUDED");
c38e3b95 534 }
3878a941 535
1f329128 536 if(iPWG4Cosmics){
537 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4CosmicCandidates.C");
538
539 AliPWG4CosmicCandidates *taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(0);
540 taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(1);
541
542 if (!taskPWG4CosmicCandidates) ::Warning("AnalysisTrainPWG4Jets", "AddTaskPWG4CosmicCandidates cannot run for this train conditions - EXCLUDED");
543 }
544
545
c38e3b95 546 if(iPWG4PtSpectra){
547 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtSpectra.C");
548 AliPWG4HighPtSpectra *taskPtSpectra = AddTaskPWG4HighPtSpectra();
549 if (!taskPtSpectra) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskPtSpectra cannot run for this train conditions - EXCLUDED");
550 }
b53f2e4f 551 if(iPWG4KMeans){
552 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskKMeans.C");
553 AliAnalysisTaskKMeans *taskKMeans = AddTaskKMeans();
554 if (!taskKMeans) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskKMenans cannot run for this train conditions - EXCLUDED");
555 }
556
d2e6cdd5 557 if(iPWG4Cluster){
558 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCluster.C");
559 AliAnalysisTaskJetCluster *taskCl = 0;
6408fe42 560 if(iPWG4Cluster&1){
561 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"KT");
6408fe42 562 }
d2e6cdd5 563 if(iPWG4Cluster&2){
564 UInt_t selection = 0;
565 if(!iAODanalysis) selection = 0xffffff;
566 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
6408fe42 567 AddTaskJetClusterDelta(kHighPtFilterMask,kUseAODMC,iPhysicsSelection,"KT",selection);
0971dabc 568 }
569 if(iPWG4Cluster&4){
570 UInt_t selection = 0;
571 if(!iAODanalysis) selection = 0xffffff;
572 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
58ef946c 573 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"ANTIKT");
574 AddTaskJetClusterDelta(kHighPtFilterMask,kUseAODMC,iPhysicsSelection,"ANTIKT",selection);
d2e6cdd5 575 }
0971dabc 576
577
d2e6cdd5 578 if (!taskCl) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCluster cannot run for this train conditions - EXCLUDED");
579
580 }
c38e3b95 581 if(iPWG4PartCorr){
582 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPartCorr.C");
14526afb 583 AliAnalysisTaskParticleCorrelation *taskpartcorrPHOS = AddTaskPartCorr("AOD", "PHOS",kFALSE,kIsMC);
c38e3b95 584 if (!taskpartcorrPHOS) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation PHOS cannot run for this train conditions - EXCLUDED");
14526afb 585 AliAnalysisTaskParticleCorrelation *taskpartcorrEMCAL = AddTaskPartCorr("AOD", "EMCAL",kFALSE,kIsMC);
c38e3b95 586 if (!taskpartcorrEMCAL) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation EMCAL cannot run for this train conditions - EXCLUDED");
4721d8c5 587 if(kDeltaAODPartCorrName.Length()>0)mgr->RegisterExtraFile(kDeltaAODPartCorrName.Data());
121e4bd5 588 }
589
d2e6cdd5 590 if(iPWG4CaloQA){
591 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/QA/AddTaskCalorimeterQA.C");
9748e967 592 AliAnalysisTaskParticleCorrelation *taskcaloQA = AddTaskCalorimeterQA("ESD",kFALSE,kIsMC,kCaloQAOutputFileName.Data());
d2e6cdd5 593 if(!taskcaloQA)::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation QA cannot run - EXCLUDED");
9748e967 594 if(kCaloQAOutputFileName.Length()>0)mgr->RegisterExtraFile(kCaloQAOutputFileName.Data());
d2e6cdd5 595 }
596
d2e6cdd5 597 if(iPWG4JetCorr){
598 // using namespace JetCorrelHD;
d3af0232 599 TString cdir = gSystem->WorkingDirectory();
600 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
d2e6cdd5 601 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCorrel.C");
602 AliAnalysisTaskJetCorrel *taskjetcorr = AddTaskJetCorrel();
d3af0232 603 gSystem->ChangeDirectory(cdir);
c166d299 604 if (!taskjetcorr) ::Warning("AnalysisTrainNew", "AliAnalysisTaskJetCorrel cannot run for this train conditions - EXCLUDED");
d2e6cdd5 605 }
606
911a740f 607 if(iPWG4Tagged){
608 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskTaggedPhotons.C");
609 AliAnalysisTaskTaggedPhotons * taskTagged = AddTaskTaggedPhotons(kFALSE); // EMCAL
58ef946c 610 taskTagged = AddTaskTaggedPhotons(kTRUE); // PHOS
911a740f 611 if (!taskTagged) ::Warning("AnalysisTrainNew", "AliAnalysisTaskTaggedPhotons cannot run for this train conditions - EXCLUDED");
612 }
121e4bd5 613 if (iPWG4omega3pi) {
614 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskomega3pi.C");
615 AliAnalysisTaskOmegaPi0PiPi *taskomega3pi = AddTaskomega3pi();
616 if (!taskomega3pi) ::Warning("AnalysisTrainNew", "AliAnalysisTaskomega3pi cannot run\
617 for these train conditions - EXCLUDED");
618 }
619
53c63663 620 // PWG4 gamma conversion analysis
621 if (iPWG4GammaConv) {
622 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskGammaConversion.C");
623 TString cdir = gSystem->WorkingDirectory();
624 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
625 // TString gcArguments = "-run-on-train -run-jet -run-chic -run-neutralmeson -run-cf";
58ef946c 626 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
627 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
82ebd295 628 TString gcArguments = "-run-on-train -run-jet -run-omega-meson -run-neutralmeson";
629 TString kGCAnalysisCutSelectionId="9002111000";
630 gcArguments.Append(Form("-set-cut-selection %s ",kGCAnalysisCutSelectionId.Data()));
53c63663 631 if(!kIsMC)gcArguments += " -mc-off";
632 AliAnalysisTaskGammaConversion * taskGammaConversion = AddTaskGammaConversion(gcArguments,mgr->GetCommonInputContainer());
633 gSystem->ChangeDirectory(cdir);
121e4bd5 634 taskGammaConversion->SelectCollisionCandidates();
53c63663 635 if (!taskGammaConversion) ::Warning("AnalysisTrainNew", "AliAnalysisTaskGammaConversion cannot run for these train conditions - EXCLUDED");
636 }
637
3878a941 638
c38e3b95 639 //==========================================================================
640 // FOR THE REST OF THE TASKS THE MACRO AddTaskXXX() is not yet implemented/
641 // Run the analysis
642 //
643 if (kPluginUse) {
644 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
645 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
646 }
647
648 if (mgr->InitAnalysis()) {
649 mgr->PrintStatus();
650 // if (kSaveTrain || strlen(config_file)) gSystem->ChangeDirectory(kTrainName);
e84da0a5 651 if (!strcmp(plugin_mode,"submit")&&smode=="GRID"){
c38e3b95 652 TString alien_workdir = gGrid->GetHomeDirectory();
653 if (iAODanalysis) alien_workdir += "analysisAOD";
654 else alien_workdir += "analysisESD";
3878a941 655 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
c38e3b95 656 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
e84da0a5 657 printf("=== AnalysisTrainPWG4Jets:: Registering jdl in the work directory alien://%s/%s, should be done by the manager! ===\n",
c38e3b95 658 alien_workdir.Data(),gridhandler->GetGridOutputDir());
58ef946c 659
660 TString dest;
661 dest = Form("%s/%s/%s.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
662 if(AliAnalysisAlien::FileExists(dest.Data())){
663 // Printf("%s exist on grid removing...",dest.Data());
664 // gGrid->Rm(dest.Data());
665 }
666 TFile::Cp(Form("file:%s.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
4721d8c5 667
668
669 TString dest;
670 dest = Form("%s/%s/%s_merge.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
671 if(AliAnalysisAlien::FileExists(dest.Data())){
672 // Printf("%s exist on grid removing...",dest.Data());
673 // gGrid->Rm(dest.Data());
674 }
675 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
676
58ef946c 677
73b7619a 678 dest = Form("%s/rootfiles/STEER/LQ1dRef_v1.root",gGrid->GetHomeDirectory());
58ef946c 679 if(AliAnalysisAlien::FileExists(dest.Data())){
680 Printf("%s exist on grid removing...",dest.Data());
681 gGrid->Rm(dest.Data());
682 }
683 TFile::Cp(Form("file:%s/STEER/LQ1dRef_v1.root",
9748e967 684 gSystem->ExpandPathName("$ALICE_ROOT")),Form("alien://%s",dest.Data()));
c38e3b95 685 }
3878a941 686 AliLog::SetGlobalLogLevel(AliLog::kError);
c166d299 687 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
688 TFile * fM = TFile::Open("manager_local.root","RECREATE");
689 mgr->Write();
690 fM->Close();
691 }
46534866 692
693 // grmpf, aliroot error handler overwrites root
694 gErrorIgnoreLevel = kErrorIgnoreLevel;
695 if(gErrorIgnoreLevel>3000) AliLog::SetGlobalLogLevel(AliLog::kFatal);
c38e3b95 696 StartAnalysis(smode, chain);
4a6f59cb 697 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
698 for(int i = 0;i < mgr->GetTopTasks()->GetEntries();i++){
699 mgr->ProfileTask(i);
700 }
701 }
c38e3b95 702 if (!strcmp(plugin_mode, "offline")&&smode=="GRID"){
e84da0a5 703 // Offline mode path files
704 // PatchJDL();
705 PatchAnalysisMacro();
706 }
c38e3b95 707
e84da0a5 708 if (kSaveTrain && smode=="GRID") {
709 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
710 TString alien_workdir = gGrid->GetHomeDirectory();
711 if (iAODanalysis) alien_workdir += "analysisAOD";
3878a941 712 else alien_workdir += "analysisESD";
713 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
e84da0a5 714 // kGridOutdir = gridhandler->GetGridOutputDir();
715 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
c38e3b95 716 alien_workdir.Data());
e84da0a5 717 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data())))
718 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
719 if (strcmp(plugin_mode, "test"))
720 TFile::Cp(Form("file:%sConfig.C",kTrainName.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
721 }
722 }
c38e3b95 723}
724
725//______________________________________________________________________________
726void StartAnalysis(const char *mode, TChain *chain) {
727// Start analysis.
728 Int_t imode = -1;
729 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
730 if (!strcmp(mode, "LOCAL")) imode = 0;
731 if (!strcmp(mode, "PROOF")) imode = 1;
732 if (!strcmp(mode, "GRID")) imode = 2;
733 switch (imode) {
734 case 0:
735 if (!chain) {
736 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
737 return;
738 }
82ebd295 739 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
c38e3b95 740 return;
741 case 1:
742 if (!kProofDataSet.Length()) {
743 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "kProofDataSet is empty");
744 return;
745 }
746 mgr->StartAnalysis(mode, kProofDataSet, kProofEvents,kProofOffset);
747 return;
748 case 2:
749 if (kPluginUse) {
750 if (!mgr->GetGridHandler()) {
751 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Grid plugin not initialized");
752 return;
753 }
754 mgr->StartAnalysis("grid");
755 } else {
756 if (!chain) {
757 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
758 return;
759 }
760 mgr->StartAnalysis(mode, chain);
761 }
762 return;
763 }
764}
765
766//______________________________________________________________________________
767void CheckModuleFlags(const char *mode) {
768// Checks selected modules and insure compatibility
769 Int_t imode = -1;
770 if (!strcmp(mode, "LOCAL")) imode = 0;
771 if (!strcmp(mode, "PROOF")) imode = 1;
772 if (!strcmp(mode, "GRID")) imode = 2;
773
774
e84da0a5 775 if (kUseCPAR) {
776 kPluginAliRootVersion = ""; // NO aliroot if we use CPAR
777 }
c38e3b95 778
779 if (imode==1) {
780 if (!kUsePAR) {
781 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
782 kUsePAR = kTRUE;
783 }
784 }
785 if (imode != 2) {
786 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
787 kPluginUse = kFALSE;
788 }
789
790
791 if(!kIsMC){
792 // switch off anthin related to MC
793 kUseMC = 0;
794 kUseAODMC = 0;
795 kUseTR = kFALSE;
796 }
797
798 if (iAODanalysis) {
799 // AOD analysis
800 if (kUseMC)
801 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
802 if (kUseAODTags)
803 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
804 kUseMC = kFALSE;
805 kUseTR = kFALSE;
806 kUseAODTags = kFALSE;
807 if (iESDfilter)
808 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
809 iESDfilter = 0;
e84da0a5 810 if (iPhysicsSelection)
811 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "Physics Selection disabled in analysis on AOD's");
812 iPhysicsSelection = 0;
c38e3b95 813 if (!iAODhandler) {
814 if (iJETAN)
815 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
816 iJETAN = 0;
817 iDIJETAN = 0;
818 }
819 // Disable tasks that do not work yet on AOD data
58ef946c 820 if(iPWG4JCORRAN)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 JCORRAN disabled in analysis on AOD's");
4d62ae1a 821 iPWG4JCORRAN = 0;
c38e3b95 822 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
823 iPWG4PtQAMC = 0;
824 if( iPWG4PtQATPC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtTPC disabled in analysis on AOD's");
825 iPWG4PtQATPC = 0;
1f329128 826 if( iPWG4Cosmics)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Comics disabled in analysis on AOD's");
827 iPWG4Cosmics = 0;
828
c38e3b95 829 if( iPWG4PtSpectra)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
830 iPWG4PtSpectra = 0;
b53f2e4f 831 if(iPWG4KMeans)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4KMeans disabled on AOD's");
832 iPWG4KMeans = 0;
d2e6cdd5 833 if (iPWG4JetCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4Jetcorr disabled on AOD's");
834 iPWG4JetCorr = 0;
c38e3b95 835 if (iPWG4PartCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
836 iPWG4PartCorr = 0;
d2e6cdd5 837 if (iPWG4CaloQA)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4CaloQA disabled on AOD's");
838 iPWG4CaloQA = 0;
911a740f 839 if (iPWG4Tagged)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4tagged disabled on AOD's");
840 iPWG4Tagged = 0;
121e4bd5 841 if (iPWG4omega3pi)
842 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
843 iPWG4omega3pi = 0;
c38e3b95 844 if(iPWG1QASym)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG1 QA Sym disabled in analysis on AOD's");
53c63663 845 if (iPWG4GammaConv)::Info("AnalysisPWG4Jets.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's");
846 iPWG4GammaConv = 0;
c38e3b95 847 iPWG1QASym = 0;
848 } else {
849 // ESD analysis
850 if (!kUseMC){
851 kUseTR = kFALSE;
852
853 if(kUseKinefilter)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Kine Filter disabled in analysis without MC");
854 kUseKinefilter = kFALSE;
855 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis without MC");
856 iPWG4PtQAMC = 0;
9748e967 857 if( iPWG4CorrectionsUE)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 CorrectionsUE disabled in analysis without MC");
858 iPWG4CorrectionsUE = 0;
c38e3b95 859 }
860 if (!kUseTR) {
c166d299 861 if(iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "iPWG4QATPCMC disabled if not reading track references");
b03b08a3 862 iPWG4PtQAMC = 0;
c38e3b95 863 }
e84da0a5 864 if (iJETAN){
865 iESDfilter=1;
866 }
c38e3b95 867 if (!iESDfilter){
868 kUseKinefilter = kFALSE;
869 kUseMuonfilter = kFALSE;
870 }
871 if(!iJETAN){
9748e967 872 iPWG4JetSpectrum = iPWG4UE = iPWG4CorrectionsUE = iPWG4ThreeJets = iDIJETAN = 0;
c38e3b95 873 }
874 }
1f329128 875 iPWG4JetTasks = iPWG4JetServices||iPWG4JetSpectrum||iPWG4UE||iPWG4PtQAMC||iPWG4PtSpectra||iPWG4PtQATPC||iPWG4Cosmics||iPWG4ThreeJets||iPWG4JetChem;
d2e6cdd5 876 iPWG4PartCorrLibs = iPWG4PartCorr||iPWG4Tagged||iPWG4CaloQA;
4721d8c5 877 iEMCUtilLibs = iPWG4PartCorrLibs||iPWG4JCORRAN;
e6993a52 878 iJETANLib = iPWG4JetTasks||iJETAN||iDIJETAN;
c38e3b95 879 if (iESDfilter) {iAODhandler=1;}
880 if (kUseKinefilter && !kUseMC) kUseKinefilter = kFALSE;
881 if (kUseAODTags && !iAODhandler) kUseAODTags = kFALSE;
882
883
884
885}
886
887//______________________________________________________________________________
888Bool_t Connect(const char *mode) {
889// Connect <username> to the back-end system.
890 Int_t imode = -1;
891 if (!strcmp(mode, "LOCAL")) imode = 0;
892 if (!strcmp(mode, "PROOF")) imode = 1;
893 if (!strcmp(mode, "GRID")) imode = 2;
894 TString username = gSystem->Getenv("alien_API_USER");
895 switch (imode) {
896 case 0:
897 break;
898 case 1:
899 if (!username.Length()) {
900 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
901 1. Have called: alien-token-init <username>\n \
902 2. Have called: >source /tmp/gclient_env_$UID");
903 return kFALSE;
904 }
905 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
906 username.Data(), kProofCluster.Data());
907 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
908// TProof::Open(Form("%s@%s:31093", username.Data(), kProofCluster.Data()));
909 TProof::Open(Form("%s@%s", username.Data(), kProofCluster.Data()));
910 if (!gProof) {
911 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
912 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
913 return kFALSE;
914 }
915 if(kProofClearPackages)gProof->ClearPackages();
916
917 if(kProofSaveToAlien){
918 TGrid::Connect("alien://");
919 if (gGrid) {
920 TString homedir = gGrid->GetHomeDirectory();
921 TString workdir = homedir + kTrainName;
922 if (!gGrid->Cd(workdir)) {
923 gGrid->Cd(homedir);
924 if (gGrid->Mkdir(workdir)) {
925 gGrid->Cd(kTrainName);
926 ::Info("AnalysisTrainPWG4Jets::Connect()", "Directory %s created", gGrid->Pwd());
927 }
928 }
929 gGrid->Mkdir("proof_output");
930 gGrid->Cd("proof_output");
931 kProofOutdir = Form("alien://%s", gGrid->Pwd());
932 }
933 }
934 break;
935 case 2:
936 if (!username.Length()) {
937 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
938 1. Have called: alien-token-init <username>\n \
939 2. Have called: >source /tmp/gclient_env_$UID");
940 return kFALSE;
941 }
942 if (kPluginUse && !gSystem->Getenv("alien_CLOSE_SE")) {
943 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode),
944 "When using the AliEn plugin it is preferable to define the \
945 variable alien_CLOSE_SE in your environment.");
946 return kFALSE;
947 }
948 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to AliEn ...",
949 username.Data());
950 TGrid::Connect("alien://");
951 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
952 break;
953 default:
954 ::Error("AnalysisTrainPWG4Jets.C::Connect", "Unknown run mode: %s", mode);
955 return kFALSE;
956 }
957 ::Info("AnalysisTrainPWG4Jets.C::Connect","Connected in %s mode", mode);
958 return kTRUE;
959}
960
961//______________________________________________________________________________
962Bool_t LoadCommonLibraries(const char *mode)
963{
964// Load common analysis libraries.
965 Int_t imode = -1;
966 if (!strcmp(mode, "LOCAL")) imode = 0;
967 if (!strcmp(mode, "PROOF")) imode = 1;
968 if (!strcmp(mode, "GRID")) imode = 2;
969 if (!gSystem->Getenv("ALICE_ROOT")) {
970 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Analysis train requires that analysis libraries are compiled with a local AliRoot");
971 return kFALSE;
972 }
973 Bool_t success = kTRUE;
974 // ROOT libraries
975 gSystem->Load("libTree.so");
976 gSystem->Load("libGeom.so");
977 gSystem->Load("libVMC.so");
978 gSystem->Load("libPhysics.so");
979
980 // Load framework classes. Par option ignored here.
981 switch (imode) {
982 case 0:
983 case 2:
984 if (kUseCPAR) {
985 success &= LoadLibrary("STEERBase", mode, kTRUE);
986 success &= LoadLibrary("ESD", mode, kTRUE);
987 success &= LoadLibrary("AOD", mode, kTRUE);
988 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
989 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
990 success &= LoadLibrary("CORRFW", mode, kTRUE);
991 } else {
992 success &= LoadLibrary("libSTEERBase.so", mode);
993 success &= LoadLibrary("libESD.so", mode);
994 success &= LoadLibrary("libAOD.so", mode);
995 success &= LoadLibrary("libANALYSIS.so", mode);
996 success &= LoadLibrary("libANALYSISalice.so", mode);
997 success &= LoadLibrary("libCORRFW.so", mode);
998 gROOT->ProcessLine(".include $ALICE_ROOT/include");
999 }
1000 break;
1001 case 1:
1002 Int_t ires = -1;
1003 if (kProofUseAFPAR && !gSystem->AccessPathName(kProofAFversion)) ires = gProof->UploadPackage(kProofAFversion);
1004 if (ires < 0) {
1005 success &= LoadLibrary("STEERBase", mode);
1006 success &= LoadLibrary("ESD", mode);
1007 success &= LoadLibrary("AOD", mode);
1008 success &= LoadLibrary("ANALYSIS", mode);
1009 success &= LoadLibrary("ANALYSISalice", mode);
1010 success &= LoadLibrary("CORRFW", mode);
1011 } else {
1012 ires = gProof->EnablePackage(kProofAFversion);
1013 if (ires<0) success = kFALSE;
1014 success &= LoadLibrary("CORRFW", mode);
1015 }
1016 break;
1017 default:
1018 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
1019 return kFALSE;
1020 }
1021 if (success) {
1022 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
1023 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
1024 gSystem->GetIncludePath());
1025 } else {
1026 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: FAILED");
1027 }
1028
1029 return success;
1030}
1031
1032//______________________________________________________________________________
1033Bool_t LoadAnalysisLibraries(const char *mode)
1034{
1035// Load common analysis libraries.
9748e967 1036 Bool_t success = kTRUE;
c38e3b95 1037 if (iESDfilter) {
1038 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
1039 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
1040 }
1041 // JETAN
e6993a52 1042 if (iJETANLib) {
b53f2e4f 1043 // this part needs some rework in case we do not need the fastjed finders for processing
1044 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
c38e3b95 1045 if (!strcmp(mode, "PROOF")){
ef1e462f 1046 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libCGAL.so\"\)", kTRUE);
c38e3b95 1047 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libfastjet.so\"\)", kTRUE);
1048 // problem when loading siscone copiled with different gcc version??
1049 // gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libsiscone.so\"\)", kTRUE);
1050 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libSISConePlugin.so\"\)", kTRUE);
1051 }
b53f2e4f 1052 if(!kUsePAR){
e84da0a5 1053 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
1054 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
1055 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
1056 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
1057 }
1058 else{
1059 // par files plus FASTJET needs some extra work... need to change
1060 // the loading sequence in the auto generated .C file
1061 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
1062 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
1063 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
1064 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
1065 }
c38e3b95 1066 if (!LoadLibrary("FASTJETAN", mode, kTRUE)) return kFALSE;
1067 }
1068 if(iPWG4JetTasks){
c38e3b95 1069 if (!LoadLibrary("PWG4JetTasks", mode, kTRUE)) return kFALSE;
1070 }
58ef946c 1071
c38e3b95 1072 if(iPWG1QASym){
99bfd7f7 1073 if (!LoadSource(Form("%s/PWG1/AliAnalysisTaskQASym.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
c38e3b95 1074 }
121e4bd5 1075 if(iPWG4TmpSourceSara){
c166d299 1076 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
121e4bd5 1077 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskEta.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1078 }
c166d299 1079 if(iPWG4TmpSourceFrag){
1080 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
1081 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskFragFunc.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1082 }
9f77f0ce 1083
58ef946c 1084
9f77f0ce 1085 /*
1086 if(iPWG4JetChem){
c580ebbb 1087 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
1088 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskJetChem.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1089 }
9f77f0ce 1090 */
c166d299 1091
4721d8c5 1092 if(iEMCUtilLibs){
1093 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
1094 !LoadLibrary("PHOSUtils", mode, kTRUE)) return kFALSE;
1095 }
1096
911a740f 1097 if (iPWG4PartCorrLibs) {
4721d8c5 1098 if (!LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
c38e3b95 1099 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
1100 }
4721d8c5 1101 if(iPWG4JCORRAN){
1102 // PWG4 particle correlations
1103 if(!LoadLibrary("PWG4JCORRAN",mode,kTRUE))return kFALSE;
1104 }
d2e6cdd5 1105 if (iPWG4JetCorr) {
1106 if (!LoadLibrary("PWG4JetCorrel", mode, kTRUE)) return kFALSE;
1107 }
121e4bd5 1108 if (iPWG4omega3pi) {
1109 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
1110 }
53c63663 1111 if (iPWG4GammaConv) {
1112 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
1113 }
c38e3b95 1114
1115 ::Info("AnalysisTrainPWG4Jets.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
1116 return kTRUE;
1117}
1118
1119//______________________________________________________________________________
1120Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
1121{
1122// Load a module library in a given mode. Reports success.
1123 Int_t imode = -1;
1124 Int_t result;
1125 TString smodule(module);
1126 if (!strcmp(mode, "LOCAL")) imode = 0;
1127 if (!strcmp(mode, "PROOF")) imode = 1;
1128 if (!strcmp(mode, "GRID")) imode = 2;
1129 TString mod(module);
1130 if (!mod.Length()) {
1131 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Empty module name");
1132 return kFALSE;
1133 }
1134 // If a library is specified, just load it
1135 if (smodule.EndsWith(".so")) {
1136 mod.Remove(mod.Index(".so"));
1137 result = gSystem->Load(mod);
1138 if (result < 0) {
1139 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load library %s", module);
1140 return kFALSE;
1141 }
1142 if (rec) anaLibs += Form("%s.so ",mod.Data());
e84da0a5 1143 if (rec) anaLibsExtra += Form("%s.so ",mod.Data());
c38e3b95 1144 return kTRUE;
1145 }
1146 // Check if the library is already loaded
1147 if (strlen(gSystem->GetLibraries(Form("%s.so", module), "", kFALSE)) > 0)
1148 return kTRUE;
1149 switch (imode) {
1150 case 0:
1151 case 2:
1152 if (kUsePAR) {
1153 result = SetupPar(module);
1154 if (rec) anaPars += Form("%s.par ", module);
1155 } else {
1156 result = gSystem->Load(Form("lib%s.so", module));
1157 if (rec) anaLibs += Form("lib%s.so ", module);
1158 }
1159 break;
1160 case 1:
1161 if(!gSystem->AccessPathName(module)){
1162 ::Info("AnalysisTrainPWG4Jets.C::LoadLibrary", "Removing directory %s",module);
1163 gSystem->Exec(Form("rm -rf %s",module));
1164 }
1165 result = gProof->UploadPackage(module);
1166 if (result<0) {
1167 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
1168 if (result<0) {
1169 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
1170 return kFALSE;
1171 }
1172 }
1173 result = gProof->EnablePackage(module);
1174 break;
1175 default:
1176 return kFALSE;
1177 }
1178 if (result < 0) {
1179 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load module %s", module);
1180 return kFALSE;
1181 }
1182 return kTRUE;
1183}
1184
1185
1186
1187//______________________________________________________________________________
1188Bool_t LoadSource(const char *source, const char *mode, Bool_t rec=kFALSE)
1189{
1190// Load a module library in a given mode. Reports success.
1191 Int_t imode = -1;
1192 Int_t result = -1;
1193 if (!strcmp(mode, "LOCAL")) imode = 0;
1194 if (!strcmp(mode, "PROOF")) imode = 1;
1195 if (!strcmp(mode, "GRID")) imode = 2;
1196 TString ssource(source);
1197 TString basename = gSystem->BaseName(ssource.Data());
1198 if (!ssource.Length()) {
1199 ::Error("AnalysisTrainPWG4Jets.C::LoadSource", "Empty task name");
1200 return kFALSE;
1201 }
4d62ae1a 1202 // we have a source code so compile it
c38e3b95 1203 if (ssource.EndsWith(".cxx")) {
1204 // need to copy it here other wise the path is also used on grid...
1205 ssource.Remove(ssource.Index(".cxx"));
1206 basename.Remove(basename.Index(".cxx"));
1207 Printf("LoadSources:: Copying... path %s{cxx,h}",ssource.Data());
1208 gSystem->Exec(Form("cp %s.cxx . ",ssource.Data()));
1209 gSystem->Exec(Form("cp %s.h . ",ssource.Data()));
1210 // Path to code
1211 // only needed for local compilation, in grid and proof mode
1212 // the task headers are uploaded
1213 // path.Remove(path.Index(gSystem->BaseName(path.Data())));
1214 // Printf("LoadSources:: Including path %s",path.Data());
1215 // if(path.Length()>0)gROOT->ProcessLine(Form(".include %s",path.Data()));
1216 Printf("LoadSources:: Loading... path %s",basename.Data());
1217 switch (imode) {
1218 case 0:
b53f2e4f 1219 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1220 break;
1221 case 1:
b53f2e4f 1222 result = gProof->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1223 break;
1224 case 2:
b53f2e4f 1225 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1226 if (rec){
1227 // what we want to compile
1228 anaSources += Form("%s.cxx ",basename.Data());
1229 // what we need as input...
1230 anaLibs += Form("%s.cxx %s.h ",basename.Data(),basename.Data());
1231 }
1232 break;
1233 default:
1234 return kFALSE;
1235 }
1236 }
1237 if (result < 0) {
1238 ::Error("AnalysisTrainPWG4Jets.C::LoadSources", "Could not load source %s", source);
1239 return kFALSE;
1240 }
1241 return kTRUE;
1242}
1243
1244
1245//______________________________________________________________________________
1246TChain *CreateChain(const char *mode, const char *plugin_mode)
1247{
1248// Create the input chain
1249 Int_t imode = -1;
1250 if (!strcmp(mode, "LOCAL")) imode = 0;
1251 if (!strcmp(mode, "PROOF")) imode = 1;
1252 if (!strcmp(mode, "GRID")) imode = 2;
1253 TChain *chain = NULL;
1254 // Local chain
1255 switch (imode) {
1256 case 0:
1257 if (iAODanalysis) {
1258 if (!kLocalXMLDataset.Length()) {
1259 // Local AOD
1260 chain = new TChain("aodTree");
1261 TString line;
1262 ifstream in;
1263 in.open(kLocalDataList.Data());
1264 while (in.good()) {
1265 in >> line;
1266 if (line.Length() == 0) continue;
1267 // cout << " line = " << line << endl;
1268 chain->Add(line.Data());
1269 }
1270 } else {
1271 // Interactive AOD
1272 chain = CreateChainSingle(kLocalXMLDataset, "aodTree");
1273 }
1274 } else {
1275 if (!kLocalXMLDataset.Length()) {
1276 // Local ESD
1277 chain = new TChain("esdTree");
1278 TString line;
1279 ifstream in;
1280 in.open(kLocalDataList.Data());
1281 while (in.good()) {
1282 in >> line;
1283 if (line.Length() == 0) continue;
1284 cout << " line = " << line << endl;
1285 chain->Add(line.Data());
1286 }
1287 } else {
1288 // Interactive ESD
1289 chain = CreateChainSingle(kLocalXMLDataset, "esdTree");
1290 }
1291 }
1292 break;
1293 case 1:
1294 break;
1295 case 2:
1296 if (kPluginUse) {
1297// AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1298// AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1299 } else {
1300 TString treeName = "esdTree";
1301 if (iAODanalysis) treeName = "aodTree";
1302 chain = CreateChainSingle("wn.xml", treeName);
1303 }
1304 break;
1305 default:
1306 }
1307 if (chain && chain->GetNtrees()) return chain;
1308 return NULL;
1309}
1310
1311//______________________________________________________________________________
1312TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
1313{
1314 printf("*******************************\n");
1315 printf("*** Getting the ESD Chain ***\n");
1316 printf("*******************************\n");
1317 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
1318
1319 if (!myCollection) {
1320 ::Error("AnalysisTrainPWG4Jets.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
1321 return NULL ;
1322 }
1323
1324 TChain* chain = new TChain(treeName);
1325 myCollection->Reset() ;
1326 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
1327 chain->ls();
1328 return chain;
1329}
1330
1331//______________________________________________________________________________
1332Int_t SetupPar(char* pararchivename)
1333{
1334 if (!pararchivename || !strlen(pararchivename)) return -1;
1335 char processline[1024];
1336 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
1337 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
1338 ::Info("AnalysisTrainPWG4Jets.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
9748e967 1339 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
1340 Form("%s.par",pararchivename));
c38e3b95 1341 } else {
1342 ::Error("AnalysisTrainPWG4Jets.C::SetupPar", "Cannot find %s.par", pararchivename);
1343 return -1;
1344 }
1345 }
1346 if (kPluginUse && kSaveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, kTrainName.Data()));
1347 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
1348
1349 TString ocwd = gSystem->WorkingDirectory();
1350 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
1351
1352 // check for BUILD.sh and execute
1353 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
1354 printf("*******************************\n");
1355 printf("*** Building PAR archive ***\n");
1356 printf("*******************************\n");
1357 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
1358 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
1359 return -1;
1360 }
1361 }
1362
1363 // check for SETUP.C and execute
1364 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
1365 printf("*******************************\n");
1366 printf("*** Setup PAR archive ***\n");
1367 printf("*******************************\n");
1368 gROOT->Macro("PROOF-INF/SETUP.C");
1369 }
1370 if (!gSystem->ChangeDirectory(ocwd.Data())) return -1;
1371 return 0;
1372}
1373
1374//______________________________________________________________________________
1375AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
1376{
1377// Check if user has a valid token, otherwise make one. This has limitations.
1378// One can always follow the standard procedure of calling alien-token-init then
1379// source /tmp/gclient_env_$UID in the current shell.
1380 if (!AliAnalysisGrid::CreateToken()) return NULL;
1381 AliAnalysisAlien *plugin = new AliAnalysisAlien();
1382// Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
1383 plugin->SetRunMode(plugin_mode);
1384 if (kPluginUseProductionMode) plugin->SetProductionMode();
1385 plugin->SetJobTag(kJobTag);
1386 plugin->SetNtestFiles(2);
1387// plugin->SetPreferedSE("ALICE::NIHAM::File");
1388// Set versions of used packages
e84da0a5 1389 plugin->SetAPIVersion("V1.1x");
1390 // plugin->SetAPIVersion("V1.0x");
1391// plugin->SetAPIVersion("V2.4");
c38e3b95 1392 plugin->SetROOTVersion(kPluginRootVersion);
1393 plugin->SetAliROOTVersion(kPluginAliRootVersion);
1394// Declare input data to be processed.
1395// Method 1: Create automatically XML collections using alien 'find' command.
1396// Define production directory LFN
1397 plugin->SetGridDataDir(kGridDatadir.Data());
1398// Set data search pattern
1399 if (iAODanalysis) plugin->SetDataPattern(" *AliAOD.root");
1400 else plugin->SetDataPattern(Form(" %s/*/*ESD.tag.root",kGridPassPattern.Data()));
1401// ...then add run numbers to be considered
1402// plugin->SetRunRange(kGridRunRange[0], kGridRunRange[1]);
1403 for (Int_t i=kGridRunRange[0]; i<=kGridRunRange[1]; i++) {
1404 Printf("AnalysisTrainPWG4Jets Adding run number %s", Form(kGridRunPattern.Data(),i));
1405 plugin->AddRunNumber(Form(kGridRunPattern.Data(),i));
1406 }
1407
1408 if(kGridLocalRunList.Length()>0){
1409 ifstream in1;
1410 in1.open(kGridLocalRunList.Data());
1411 int iRun;
9a5c5b1e 1412
1413 /*
e84da0a5 1414 char c;
1415 char cLine[250];
1416 while(!in1.eof()){
1417 c = in1.get();
1418 if ( (c >= '0') && (c <= '9') )
1419 {
1420 in1.putback (c);
1421 in1>>iRun;
1422 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1423 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1424 }
1425 else
1426 {
1427 in1.putback (c);
1428 in1.getline(cLine,250);
9a5c5b1e 1429
1430 }
1431 }
1432 */
9748e967 1433
1434 Int_t nRun = 0;
9a5c5b1e 1435
1436 // just use run numbers, negatives will be excluded
1437 while(in1>>iRun){
9748e967 1438
1439 if(iRun>0&&(nRun<kGridMaxRunsFromList)){
9a5c5b1e 1440 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1441 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
9748e967 1442 nRun++;
9a5c5b1e 1443 }
1444 else{
1445 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d", iRun);
e84da0a5 1446 }
c38e3b95 1447 }
1448 }
1449
1450// Method 2: Declare existing data files (raw collections, xml collections, root file)
1451// If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
1452// XML collections added via this method can be combined with the first method if
1453// the content is compatible (using or not tags)
1454// plugin->AddDataFile("tag.xml");
1455// plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
1456// Define alien work directory where all files will be copied. Relative to alien $HOME.
3878a941 1457 TString alien_workdir = "";
1458
1459 if (iAODanalysis) alien_workdir += "analysisAOD";
1460 else alien_workdir += "analysisESD";
1461 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1462 plugin->SetGridWorkingDir(alien_workdir.Data());
1463
c38e3b95 1464 // Declare alien output directory. Relative to working directory.
1465 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1466 plugin->SetGridOutputDir(kGridOutdir);
1467
1468 // Add external packages
1469 if (iJETAN||iDIJETAN) {
23adcac8 1470 plugin->AddExternalPackage("boost::v1_43_0");
1471 plugin->AddExternalPackage("cgal::v3.6");
1472 plugin->AddExternalPackage("fastjet::v2.4.2");
c38e3b95 1473 }
1474
1475
1476 // set extra libs before par file compilation
1477 anaLibs += kGridExtraFiles;
1478 anaLibs = anaLibs.Strip();
e84da0a5 1479 Printf("anaLibs %s",anaLibs.Data());
1480 Printf("anaLibsExtra %s",anaLibsExtra.Data());
1481
1482 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs.Data());
1483 if (anaLibsExtra.Length()) plugin->SetAdditionalRootLibs(anaLibsExtra.Data());
c38e3b95 1484
1485 TString ana_sources = "";
1486 TString ana_add = "";
1487 if (kUsePAR && anaPars.Length()) {
1488 printf("%s\n", anaPars.Data());
1489 TObjArray *arr;
1490 TObjString *objstr;
1491 arr = anaPars.Tokenize(" ");
1492 TIter next(arr);
1493 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
1494 delete arr;
1495 }
1496
1497// Declare the analysis source files names separated by blancs. To be compiled runtime
1498// using ACLiC on the worker nodes.
1499 ana_sources = anaSources.Strip();
1500// Declare all libraries (other than the default ones for the framework. These will be
1501// loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
1502
1503 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
1504 plugin->SetExecutableCommand(kPluginExecutableCommand.Data());
4721d8c5 1505 // Declare the output file names separated by blancs.
1506 // (can be like: file.root or file.root@ALICE::Niham::File)
c38e3b95 1507 plugin->SetMergeExcludes(kGridMergeExclude);
1508 plugin->SetMaxMergeFiles(kGridMaxMergeFiles);
1509 plugin->SetNrunsPerMaster(kGridRunsPerMaster);
9a5c5b1e 1510 plugin->SetMergeViaJDL(kPluginMergeViaJDL);
4721d8c5 1511 // Use fastread option
9a5c5b1e 1512 plugin->SetFastReadOption(kPluginFastReadOption);
4721d8c5 1513 // UseOverwrite mode
9a5c5b1e 1514 plugin->SetOverwriteMode(kPluginOverwriteMode);
4721d8c5 1515 // Optionally define the files to be archived.
1516 // plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
dc6a7461 1517 plugin->SetOutputToRunNo(kPluginOutputToRunNumber); // write the output to subdirs named after run number
c38e3b95 1518
1519 // Put default output files to archive
1520 TString listhists = "";
1521 TString listaods = "";
1522 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1523 TIter next(mgr->GetOutputs());
1524 AliAnalysisDataContainer *output;
1525 while ((output=(AliAnalysisDataContainer*)next())) {
1526 const char *filename = output->GetFileName();
1527 if (!(strcmp(filename, "default"))) {
53c63663 1528 if (!mgr->GetOutputEventHandler()) continue;
c38e3b95 1529 filename = mgr->GetOutputEventHandler()->GetOutputFileName();
e84da0a5 1530 if (listaods.Length()) listaods += " ";
c38e3b95 1531 listaods += filename;
c38e3b95 1532 } else {
e84da0a5 1533 if(!listhists.Contains(filename)){
1534 if (listhists.Length()) listhists += " ";
c38e3b95 1535 listhists += filename;
1536 }
1537 }
1538 }
53c63663 1539
53c63663 1540 if (mgr->GetExtraFiles().Length()) {
e84da0a5 1541 if (listaods.Length()) listaods += " ";
53c63663 1542 listaods += mgr->GetExtraFiles();
c38e3b95 1543 }
53c63663 1544
1545 // if we do not fill the aod we do not need to store it
4721d8c5 1546 // kGridMergeExclude = listaods;
e84da0a5 1547
4721d8c5 1548 if(kSaveAOD!=0){
1549 TString outputFiles = "";
1550 outputFiles += mgr->GetExtraFiles();
1551 if (listhists.Length()) outputFiles += " ";
1552 outputFiles += listhists;
e84da0a5 1553 plugin->SetDefaultOutputs(kFALSE);
4721d8c5 1554 Printf("%s:%d Starting with the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
1555 // remove
1556 // no harm done when we try to remove something that is not there :)
1557 if(!(kSaveAOD&(1<<0))){
1558 outputFiles.ReplaceAll("AliAOD.root ","");
1559 listaods.ReplaceAll("AliAOD.root ","");
1560 }
1561 if(!(kSaveAOD&(1<<1))){
1562 if(kDeltaAODJetName.Length())outputFiles.ReplaceAll(kDeltaAODJetName.Data(),"");
1563 if(kDeltaAODJetName.Length())listaods.ReplaceAll(kDeltaAODJetName.Data(),"");
1564
1565 }
1566 if(!(kSaveAOD&(1<<2))){
1567 if(kDeltaAODPartCorrName.Length())outputFiles.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
1568 if(kDeltaAODPartCorrName.Length())listaods.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
1569 }
1570 if(!(kSaveAOD&(1<<3))){
1571 if(kDeltaAODJCORRANName.Length())outputFiles.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
1572 if(kDeltaAODJCORRANName.Length())listaods.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
1573 }
1574
1575 //
1576 Printf("%s:%d Saving the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
1577 plugin->SetOutputFiles(outputFiles.Data());
e84da0a5 1578 }
53c63663 1579
4721d8c5 1580 TString outputArchive;
17841481 1581 outputArchive = Form("log_archive.zip:std*@%s",kGridOutputStorages.Data());
e84da0a5 1582 listaods.ReplaceAll(" ", ",");
1583 listhists.ReplaceAll(" ", ",");
4721d8c5 1584 if (listhists.Length()) listhists = Form("hist_archive.zip:%s@%s", listhists.Data(), kGridOutputStorages.Data());
1585 if (listaods.Length()) listaods = Form("aod_archive.zip:%s@%s", listaods.Data(), kGridOutputStorages.Data());
53c63663 1586
c38e3b95 1587 if (!listhists.Length() && !listaods.Length()) {
1588 ::Fatal("AnalysisTrainPWG4Jets", "No task output !");
1589 }
4721d8c5 1590
c38e3b95 1591 if (listaods.Length()) {
1592 outputArchive += " ";
1593 outputArchive += listaods;
1594 }
1595 if (listhists.Length()) {
1596 outputArchive += " ";
1597 outputArchive += listhists;
1598 }
1599 plugin->SetOutputArchive(outputArchive);
4721d8c5 1600
1601
c38e3b95 1602// Optionally set a name for the generated analysis macro (default MyAnalysis.C)
1603 plugin->SetAnalysisMacro(Form("%s.C", kTrainName.Data()));
1604// Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
1605 plugin->SetSplitMaxInputFileNumber(kGridFilesPerJob);
1606// Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
1607// plugin->SetMaxInitFailed(5);
1608// Optionally resubmit threshold.
1609// plugin->SetMasterResubmitThreshold(90);
1610// Optionally set time to live (default 30000 sec)
17841481 1611 plugin->SetTTL(36000); // 10h...
c38e3b95 1612// Optionally set input format (default xml-single)
1613 plugin->SetInputFormat("xml-single");
1614// Optionally modify the name of the generated JDL (default analysis.jdl)
1615 plugin->SetJDLName(Form("%s.jdl", kTrainName.Data()));
1616// Optionally modify the executable name (default analysis.sh)
1617 plugin->SetExecutable(Form("%s.sh", kTrainName.Data()));
1618// Optionally modify job price (default 1)
1619 plugin->SetPrice(1);
1620// Optionally modify split mode (default 'se')
1621 plugin->SetSplitMode("se");
1622 return plugin;
1623}
1624
1625//______________________________________________________________________________
1626void WriteConfig()
1627{
1628// Write train configuration in a file. The file name has the format:
1629// train_[trainName]_ddMonthyyyy_time.C
1630 if (kUseDate) {
1631 gSystem->Exec("date +%d%b%Y_%Hh%M > date.tmp");
1632 ifstream fdate("date.tmp");
1633 if (!fdate.is_open()) {
1634 ::Error("AnalysisTrainPWG4Jets.C::Export","Could not generate file name");
1635 return;
1636 }
1637 const char date[64];
1638 fdate.getline(date,64);
1639 fdate.close();
1640 gSystem->Exec("rm date.tmp");
1641 kTrainName = Form("train_%s_%s", kTrainName.Data(), date);
1642 } else {
1643 kTrainName = Form("train_%s", kTrainName.Data());
1644 }
1645 TString cdir = gSystem->WorkingDirectory();
1646 gSystem->MakeDirectory(kTrainName);
1647 gSystem->ChangeDirectory(kTrainName);
1648 ofstream out;
1649 out.open(Form("%sConfig.C",kTrainName.Data()), ios::out);
1650 if (out.bad()) {
1651 ::Error("AnalysisTrainPWG4Jets.C::Export", "Cannot open ConfigTrain.C for writing");
1652 return;
1653 }
1654 out << "{" << endl;
1655 out << " kTrainName = " << "\"" << kTrainName.Data() << "\";" << endl;
1656 out << " kProofCluster = " << "\"" << kProofCluster.Data() << "\";" << endl;
1657 out << " kProofUseAFPAR = " << kProofUseAFPAR << ";" << endl;
1658 if (kProofUseAFPAR)
1659 out << " kProofAFversion = " << kProofAFversion.Data() << ";" << endl;
1660 out << " kProofDataSet = " << "\"" << kProofDataSet.Data() << "\";" << endl;
1661 out << " kPluginUse = " << kPluginUse << ";" << endl;
1662 out << " kUsePAR = " << kUsePAR << ";" << endl;
1663 out << " kUseCPAR = " << kUseCPAR << ";" << endl;
1664 out << " kPluginRootVersion = " << "\"" << kPluginRootVersion.Data() << "\";" << endl;
1665 out << " kPluginAliRootVersion = " << "\"" << kPluginAliRootVersion.Data() << "\";" << endl;
1666 out << " kGridDatadir = " << "\"" << kGridDatadir.Data() << "\";" << endl;
1667 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1668 out << " kGridOutdir = " << "\"" << kGridOutdir.Data() << "\";" << endl;
1669 out << " kGridMaxMergeFiles = " << kGridMaxMergeFiles << ";" << endl;
1670 out << " kGridMergeExclude = " << "\"" << kGridMergeExclude.Data() << "\";" << endl;
1671 out << " kGridRunsPerMaster = " << kGridRunsPerMaster << ";" << endl;
1672 out << " kGridFilesPerJob = " << kGridFilesPerJob << ";" << endl;
1673 out << " kGridRunRange[0] = " << kGridRunRange[0] << ";" << endl;
1674 out << " kGridRunRange[1] = " << kGridRunRange[1] << ";" << endl;
1675 out << " kUseDebug = " << kUseDebug << ";" << endl;
1676 out << " kUseMC = " << kUseMC << ";" << endl;
1677 out << " kUseESDTags = " << kUseESDTags << ";" << endl;
1678 out << " kUseKinefilter = " << kUseKinefilter << ";" << endl;
1679 out << " kUseTR = " << kUseTR << ";" << endl;
1680 out << " kUseAODTags = " << kUseAODTags << ";" << endl;
1681 out << " kSaveTrain = " << "kFALSE;" << endl << endl;
1682 out << " // Analysis modules" << endl;
1683 out << " iAODanalysis = " << iAODanalysis << ";" << endl;
1684 out << " iAODhandler = " << iAODhandler << ";" << endl;
1685 out << " iESDfilter = " << iESDfilter << ";" << endl;
1686 out << " iJETAN = " << iJETAN << ";" << endl;
1687 out << "// Configuration fot the wagons" << endl;
1688 out << "}" << endl;
1689 ::Info("AnalysisTrainPWG4Jets.C::WriteConfig", "Train configuration wrote to file %s", Form("config_%s.C", kTrainName.Data()));
1690 gSystem->ChangeDirectory(cdir);
1691}
1692
1693//______________________________________________________________________________
1694Bool_t LoadConfig(const char *filename)
1695{
1696// Read train configuration from file
1697 if (gSystem->AccessPathName(filename)) {
1698 ::Error("AnalysisTrainPWG4Jets.C::LoadConfig", "Config file name not found");
1699 return kFALSE;
1700 }
1701 gROOT->ProcessLine(Form(".x %s", filename));
1702 ::Info("AnalysisTrainPWG4Jets.C::LoadConfig", "Train configuration loaded from file %s", filename);
1703 return kTRUE;
1704}
1705
1706Bool_t PatchJDL(){
1707 Printf(">>> Patching JDL");
1708 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1709 AliAnalysisAlien* gridHandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1710 TGridJDL *jdl = gridHandler->GetGridJDL();
1711 if(iJETAN)jdl->AddToPackages("fastjet","v2.4.0");
1712 gridHandler->WriteJDL(kFALSE);
0971dabc 1713 Printf("<<< Patching JDL");
c38e3b95 1714 return kTRUE;
1715}
1716
1717Bool_t PatchAnalysisMacro(){
4721d8c5 1718 Printf(">>> Patching AnalysisMacro");
1719 gSystem->Exec(Form("mv %s.C %s.C_tmp",kTrainName.Data(),kTrainName.Data()));
c38e3b95 1720
1721 ifstream in1;
1722 in1.open(Form("%s.C_tmp", kTrainName.Data()));
1723 char cLine[250];
1724 TString st;
1725 while(in1.getline(cLine,250)){
1726 st += cLine;
1727 st += "\n";
1728 }
4721d8c5 1729 Int_t index= -1;
c38e3b95 1730 index = st.Index("gSystem->Load(\"libPhysics\");");
1731 index += strlen("gSystem->Load(\"libPhysics\");");
4721d8c5 1732 /*
c38e3b95 1733 TObjArray *arr;
1734 TObjString *objstr;
1735 arr = anaLibs.Tokenize(" ");
1736 TIter next(arr);
4721d8c5 1737
c38e3b95 1738 add += "\n\n // added by CKB \n";
1739 while ((objstr=(TObjString*)next())){
e84da0a5 1740 if(objstr->GetString().Contains("PWG3"))continue;
c38e3b95 1741 if(objstr->GetString().EndsWith(".so"))add += Form("gSystem->Load(\"%s\");\n",objstr->GetString().Data());
1742 }
1743 delete arr;
4721d8c5 1744 */
3878a941 1745 // add += Form("AliLog::SetGlobalLogLevel(%d);\n",AliLog::GetGlobalLogLevel());
4721d8c5 1746 TString add = "";
1747
1748 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1749 add += "\n\n // added by CKB \n";
46534866 1750 if(kErrorIgnoreLevel>0)add += Form("gErrorIgnoreLevel = %d;\n",kErrorIgnoreLevel);
23adcac8 1751 add += "\n gSystem->AddIncludePath(\"./\"); \n";
4721d8c5 1752 if(gGrid&&kPluginAliRootVersion.Length()==0){
1753 add += "\n // Dirty hack for TRD reference data \n";
1754 add += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
1755 add += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
1756 add += "\"); \n";
c38e3b95 1757 }
4721d8c5 1758 add += "// BKC \n\n";
1759 st.Insert(index,add.Data());
e84da0a5 1760
1761 if(kUseDebug){
23adcac8 1762 // st.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
e84da0a5 1763 }
1764
4721d8c5 1765 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
1766 index = st.Index("gSystem->AddIncludePath(\"-I$"); // uncommen $ALICE_ROOT include for par files
1767 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1768 st.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
1769 }
c166d299 1770
46534866 1771 if(AliLog::GetGlobalLogLevel()==AliLog::kFatal){
1772 index = st.Index("AliLog::SetGlobal"); // ncomment setting of log level, do my own
1773 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1774 st.Insert(index,"AliLog::SetGlobalLogLevel(AliLog::kFatal);// CKB \n // CKB comment out for own setting \n //");
1775 }
1776
c38e3b95 1777 ofstream out;
1778 out.open(Form("%s.C", kTrainName.Data()));
1779 if (out.bad()) {
1780 return kFALSE;
1781 }
1782 out << st << endl;
1783 Printf("<<< Patching AnalysisMacro");
4721d8c5 1784
1785
1786
1787
1788
1789 Printf(">>> Patching Merge Macro");
1790 gSystem->Exec(Form("mv %s_merge.C %s_merge.C_tmp",kTrainName.Data(),kTrainName.Data()));
1791
1792 ifstream in2;
1793 in2.open(Form("%s_merge.C_tmp", kTrainName.Data()));
1794 TString st2;
1795 while(in2.getline(cLine,250)){
1796 st2 += cLine;
1797 st2 += "\n";
1798 }
1799 index = st2.Index("gSystem->Load(\"libPhysics\");");
1800 index += strlen("gSystem->Load(\"libPhysics\");");
1801 TString add2 = "";
23adcac8 1802 add2 += "\n gSystem->AddIncludePath(\"./\"); \n";
4721d8c5 1803 if(gGrid&&kPluginAliRootVersion.Length()==0){
1804 add2 += "\n // Dirty hack for TRD reference data \n";
1805 add2 += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
1806 add2 += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
1807 add2 += "\"); \n";
1808 }
1809 add2 += "// BKC \n\n";
1810 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1811 st2.Insert(index,add.Data());
1812
1813
1814 if(kUseDebug){
23adcac8 1815 // st2.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
4721d8c5 1816 }
1817
1818 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
46534866 1819 index = st2.Index("gSystem->AddIncludePath(\"-I$"); // uncomment $ALICE_ROOT include for par files
4721d8c5 1820 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1821 st2.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
1822 }
1823
1824 // do not exclude the extra files from merign, this is done explicitly in this train script
1825 index = st2.Index("mergeExcludes +="); // uncommen $ALICE_ROOT include for par files
1826 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1827 st2.Insert(index,"// CKB comment out, handled explicitly by the train macro \n //");
1828
1829
1830 ofstream out2;
1831 out2.open(Form("%s_merge.C", kTrainName.Data()));
1832 if (out2.bad()) {
1833 return kFALSE;
1834 }
1835 out2 << st2 << endl;
1836 Printf("<<< Patching Merging Macro");
1837
1838
1839
c38e3b95 1840 return kTRUE;
1841
1842}