missing from rev 44785
[u/mrichter/AliRoot.git] / PWG4 / macros / AnalysisTrainPWG4Jets.C
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c38e3b95 1//===================== ANALYSIS TRAIN =========================================
2// To use: copy this macro to your work directory, modify the global part to match
3// your needs, then run root.
4// root[0] .L AnalysisTrain.C
5// Grid full mode as below (other modes: test, offline, submit, terminate)
121e4bd5 6// root[1] AnalysisTrainPWG-244Jets("grid", "full")
c38e3b95 7// CAF mode (requires root v5-23-02 + aliroot v4-16-Rev08)
8// root[2] AnalysisTrainPWG4Jets("proof")
9// Local mode requires AliESds.root or AliAOD.root in ./data directory
10// root[3] AnalysisTrainPWG4Jets("local")
11// In proof and grid modes, a token is needed and sourcing the produced environment file.
12//
13// If 'saveTrain' flag is set, the train will generate a directory name and run
14// in this directory. A configuration file 'ConfigTrain.C' will be generated.
15// One can replay at any time the train via:
16// root[1] AnalysisTrainPWG4Jets(ana_mode, plugin_mode, "train_default_<date>/ConfigTrain.C")
17
18// For Usage with fastjet run in "offline" first and then "submit"
19// jdl and analysismacro are automatically patched after "offline" mode
20
21// =============================================================================
22// ### General Steering variables
23// =============================================================================
24//== general setup variables
25TString kTrainName = "testAnalysis"; // *CHANGE ME* (no blancs or special characters)
26TString kJobTag = "PWG4 Jet Tasks analysis train configured"; // *CHANGE ME*
27
28// Usage of par files ONLY in grid mode and ONLY if the code is not available
29// in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
30// To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
31// AliRoot.
32Bool_t kUsePAR = kFALSE; // use par files for extra libs
33Bool_t kUseCPAR = kFALSE; // use par files for common libs
34Bool_t kFillAOD = kFALSE; // switch of AOD filling for on the fly analysis
4721d8c5 35Int_t kSaveAOD = 8; // Bit switch 1 = Full AOD 2 = Jet AOD , 4 = PartCorr, 8 = JCORRAN
c38e3b95 36//== general input and output variables
9a5c5b1e 37
c38e3b95 38Int_t iAODanalysis = 1; // Analysis on input AOD's
39Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
40Int_t iESDfilter = 0; // ESD to AOD filter (barrel + muon tracks)
e84da0a5 41Int_t iPhysicsSelection = 1; // ESD to AOD filter (barrel + muon tracks)
cfd02305 42Bool_t useTender = kFALSE; // use tender wagon
c38e3b95 43Bool_t kUseKinefilter = kFALSE; // use Kinematics filter
44Bool_t kUseMuonfilter = kFALSE; // use Kinematics filter
45TString kCommonOutputFileName = "PWG4_JetTasksOutput.root";
9748e967 46TString kCaloQAOutputFileName = "PWG4_CaloQAOutput.root";
c38e3b95 47
48
49//== general process variables
50
51// ### Other flags to steer the analysis
52//==============================================================================
9a5c5b1e 53Bool_t kSkipTerminate = kTRUE; // Do not call Teminate
c38e3b95 54Bool_t kUseDate = kFALSE; // use date in train name
55Bool_t kUseDebug = kTRUE; // activate debugging
46534866 56Int_t kErrorIgnoreLevel = -1; // takes the errror print level from .rootrc
57// From TError.h:
58// const Int_t kUnset = -1;
59// const Int_t kPrint = 0;
60// const Int_t kInfo = 1000;
61// const Int_t kWarning = 2000;
62// const Int_t kError = 3000;
63// const Int_t kBreak = 4000;
64// const Int_t kSysError = 5000;
65// const Int_t kFatal = 6000;
66Int_t kUseSysInfo = 0; // activate debugging
ebad39a9 67Long64_t kNumberOfEvents = 1234567890; // number of events to process from the chain
c38e3b95 68Bool_t kUseMC = kTRUE; // use MC info
69Bool_t kIsMC = kTRUE; // is MC info, if false it overwrites Use(AOD)MC
70Bool_t kUseAODMC = kTRUE; // use MC infA
71Bool_t kUseESDTags = kFALSE; // use ESD tags for selection
72Bool_t kUseTR = kFALSE; // use track references
73Bool_t kUseAODTags = kFALSE; // use AOD tags
74Bool_t kSaveTrain = kFALSE; // save train configuration as:
75
9a5c5b1e 76
c38e3b95 77// ### Analysis modules to be included. Some may not be yet fully implemented.
78//==============================================================================
79Int_t iJETAN = 1; // Jet analysis (PWG4) // 1 write standard 2 write non-standard jets, 3 wrtie both
80Int_t iDIJETAN = 1;
e6993a52 81Int_t iJETANLib = 1;
c38e3b95 82Int_t iPWG1QASym = 0; // Eva's QA task compiled on the fly...
83Int_t iPWG4JetTasks = 0; // all jet tasks flag for lib laoding
84Int_t iPWG4JetServices = 0; // jet spectrum analysis
85Int_t iPWG4JetSpectrum = 0; // jet spectrum analysis
58ef946c 86Int_t iPWG4JCORRAN = 0; // JCORRAN module
c38e3b95 87Int_t iPWG4UE = 0; // Underlying Event analysis
e0c120d9 88Int_t iPWG4LeadingUE = 0; // Underlying Event analysis
89Int_t iPWG4CorrectionsUE = 0; // Underlying Event analysis
c166d299 90Int_t iPWG4TmpSourceSara = 0; // Underlying Event analysis not in svn
aba42fcb 91Int_t iPWG4Fragmentation = 0; // Official Fragmentation
9f77f0ce 92Int_t iPWG4JetChem = 0; // Jet chemistry
c38e3b95 93Int_t iPWG4PtQAMC = 0; // Marta's QA tasks
94Int_t iPWG4PtSpectra = 0; // Marta's QA tasks
95Int_t iPWG4PtQATPC = 0; // Marta's QA tasks
4721d8c5 96Int_t iPWG4Cosmics = 0; // Marta's Cosmics Taks
c38e3b95 97Int_t iPWG4ThreeJets = 0; // Sona's thrust task
cc636095 98Int_t iPWG4QGSep = 0; // Sona's QG Separation task
99Int_t iPWG4Minijet = 0; // Eva's Mini Jet Task cluster task
b53f2e4f 100Int_t iPWG4KMeans = 0; // Andreas' KMeans task
d2e6cdd5 101Int_t iPWG4Cluster = 0; // CKB cluster task
4721d8c5 102Int_t iEMCUtilLibs = 0; // Flag to satisfy dependence on EMC utils
911a740f 103Int_t iPWG4PartCorrLibs = 0; // Gustavo's part corr analysis
c38e3b95 104Int_t iPWG4PartCorr = 0; // Gustavo's part corr analysis
d2e6cdd5 105Int_t iPWG4CaloQA = 0; // Gustavo's part corr analysis
106Int_t iPWG4JetCorr = 0; // Paul's jet corr analysis
911a740f 107Int_t iPWG4Tagged = 0; // Gustavo's part corr analysis
121e4bd5 108Int_t iPWG4omega3pi = 0; // Omega to 3 pi analysis (PWG4)
17d96675 109Int_t iPWG4GammaConvLib = 0; // Gamma Conversio
53c63663 110Int_t iPWG4GammaConv = 0; // Gamma Conversio
17d96675 111Int_t iPWG4CaloConv = 0; // Gamma Conversio
22e3ae6c 112Int_t kHighPtFilterMask = 32; // change depending on the used AOD Filter
e6993a52 113TString kDeltaAODJetName = "AliAOD.Jets.root";
4721d8c5 114TString kDeltaAODJCORRANName = "AliAOD.JCORRAN.root";
53c63663 115TString kDeltaAODPartCorrName = "deltaAODPartCorr.root";
c38e3b95 116
117
118//==============================================================================
119// ### PROOF Steering varibales
120//==============================================================================
121//== proof setup variables
122TString kProofCluster = "alicecaf.cern.ch";
123Bool_t kProofUseAFPAR = kFALSE; // use AF special par file
124TString kProofAFversion = "AF-v4-17";
125//== proof input and output variables
126TString kProofDataSet = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
127Bool_t kProofSaveToAlien = kFALSE; // save proof outputs in AliEn train_[trainName]_ddMonthyyyy_time.C
128TString kProofOutdir = "";
129Bool_t kProofClearPackages = kFALSE;
130Int_t kProofEvents = 10000;
131Int_t kProofOffset = 0;
132//== proof process variables
133
134
135//==============================================================================
136// ### Grid plugin Steering varibiables
137//==============================================================================
138//== grid plugin setup variables
139Bool_t kPluginUse = kTRUE; // do not change
140Bool_t kPluginUseProductionMode = kFALSE; // use the plugin in production mode
92d850d5 141TString kPluginRootVersion = "v5-27-06a-1"; // *CHANGE ME IF MORE RECENT IN GRID*
d3af0232 142TString kPluginAliRootVersion = "v4-19-15-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
9a5c5b1e 143Bool_t kPluginMergeViaJDL = kTRUE; // merge via JDL
144Bool_t kPluginFastReadOption = kFALSE; // use xrootd tweaks
145Bool_t kPluginOverwriteMode = kTRUE; // overwrite existing collections
dc6a7461 146Int_t kPluginOutputToRunNumber = 1; // write the output to subdirs named after run number
c38e3b95 147// TString kPluginExecutableCommand = "root -b -q";
148TString kPluginExecutableCommand = "source /Users/kleinb/setup_32bit_aliroot_trunk_clean_root_trunk.sh; alienroot -b -q ";
9a5c5b1e 149
c38e3b95 150// == grid plugin input and output variables
151TString kGridDatadir = "/alice/sim/PDC_08b/LHC09a1/AOD/";
9748e967 152Int_t kGridMaxRunsFromList = 999999999;
4d16db9c 153Int_t kGridOffsetRunFromList = 0; // skip the first n runs from the list
c38e3b95 154TString kGridLocalRunList = "";
155TString kGridOutdir = ""; // AliEn output directory. If blank will become output_<kTrainName>
3878a941 156TString kGridDataSet = ""; // sub working directory not to confuse different run xmls
9748e967 157Int_t kGridRunRange[2] = {0, -1}; // Set the run range
c38e3b95 158TString kGridRunPattern = "%03d"; // important for leading zeroes!!
159TString kGridPassPattern = "";
160TString kGridExtraFiles = ""; // files that will be added to the input list in the JDL...
9748e967 161Int_t kGridMaxMergeFiles = 12; // Number of files merged in a chunk grid run range
c38e3b95 162TString kGridMergeExclude = "AliAOD.root"; // Files that should not be merged
6408fe42 163TString kGridOutputStorages = "disk=2"; // Make replicas on the storages
c38e3b95 164// == grid process variables
c28abe00 165Int_t kGridRunsPerMaster = 100; // Number of runs per master job
e84da0a5 166Int_t kGridFilesPerJob = 100; // Maximum number of files per job (gives size of AOD)
c38e3b95 167
168//==============================================================================
169// ### Local Steering variables
170//==============================================================================
171//== local setup variables
172//== local input and output variables
173TString kLocalXMLDataset = ""; // Change local xml dataset for local interactive analysis
174TString kLocalDataList = "local_deltaaod.txt"; // Change local xml dataset for local interactive analysis
175// == local process variables
176
8ecf60e0 177TString kPluginMode;
c38e3b95 178
179
180// Temporaries.
181TString anaPars = "";
182TString anaLibs = "";
e84da0a5 183TString anaLibsExtra = "";
c38e3b95 184TString anaSources = "";
185// Function signatures
186class AliAnalysisAlien;
187
188//______________________________________________________________________________
189void AnalysisTrainPWG4Jets(const char *analysis_mode="local",
190 const char *plugin_mode="",
4d16db9c 191 const char *config_file="",Int_t iOffset = 0,Int_t iTotal = 0)
c38e3b95 192{
193// Main analysis train macro. If a configuration file is provided, all parameters
194// are taken from there but may be altered by CheckModuleFlags.
3878a941 195
8ecf60e0 196 // these flag may be needed by the config file
197 kPluginMode = plugin_mode;
198
199 if (strlen(config_file) && !LoadConfig(config_file)) return;
4d16db9c 200 if(iTotal>0)kGridMaxRunsFromList = iTotal; // overwrites the settings from config file
201 if(iOffset)kGridOffsetRunFromList = iOffset;
202 if(iOffset)kProofOffset = iOffset;
203
3878a941 204
c38e3b95 205 TString smode(analysis_mode);
206 smode.ToUpper();
207 if (kSaveTrain)WriteConfig();
8ecf60e0 208 // Check compatibility of selected modules
c38e3b95 209 CheckModuleFlags(smode);
ebad39a9 210 // gROOT->ProcessLine(".trace");
c38e3b95 211
212 printf("==================================================================\n");
213 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", kTrainName.Data(),smode.Data());
214 printf("==================================================================\n");
9748e967 215 printf("= Configuring analysis train for: =\n");
c38e3b95 216 if (iAODanalysis) printf("= AOD analysis =\n");
9748e967 217 else printf("= ESD analysis =\n");
218 if (iPhysicsSelection) printf("= Physics selection =\n");
cfd02305 219 if (useTender) printf("= Using tender =\n");
c38e3b95 220 if (iESDfilter) printf("= ESD filter =\n");
221 if (iJETAN) printf("= Jet analysis =\n");
222 printf("==================================================================\n");
9748e967 223
224 char *printMask = ":: %20s %10d\n";
225 printf(printMask,"Fill AOD",(UInt_t)kFillAOD);
226 printf(printMask,"Save AOD", (UInt_t)kSaveAOD);
227 printf(printMask,"MC truth", (UInt_t)kUseMC);
228 printf(printMask,"KINE filter", (UInt_t)kUseKinefilter);
229 printf(printMask,"track refs", (UInt_t)kUseTR);
230 printf(printMask,"tags", (UInt_t)kUseESDTags);
231 printf(printMask,"AOD tags", (UInt_t)kUseAODTags);
232 printf(printMask,"debugging", (UInt_t)kUseDebug);
233 printf(printMask,"PAR files", (UInt_t)kUsePAR);
234 printf(printMask,"AliEn plugin", (UInt_t)kPluginUse);
235 printf(printMask,"PWG1 QA sym", iPWG1QASym);
236 printf(printMask,"PWG4 Source Sara",iPWG4TmpSourceSara);
aba42fcb 237 printf(printMask,"PWG4 Fragmentation",iPWG4Fragmentation);
9748e967 238 printf(printMask,"PWG4 Jet Chem",iPWG4JetChem);
239 printf(printMask,"PWG4 Jet tasks",iPWG4JetTasks);
240 printf(printMask,"PWG4 Jet Services",iPWG4JetServices);
241 printf(printMask,"PWG4 Jet Spectrum",iPWG4JetSpectrum);
242 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
243 printf(printMask,"PWG4 UE",iPWG4UE);
e0c120d9 244 printf(printMask,"PWG4 Leading UE",iPWG4LeadingUE);
9748e967 245 printf(printMask,"PWG4 Corrections UE",iPWG4CorrectionsUE);
246 printf(printMask,"PWG4 Pt QA MC",iPWG4PtQAMC);
247 printf(printMask,"PWG4 Pt Spectra",iPWG4PtSpectra);
248 printf(printMask,"PWG4 Pt QA TPC",iPWG4PtQATPC);
249 printf(printMask,"PWG4 Cosmics",iPWG4Cosmics);
250 printf(printMask,"PWG4 Three Jets",iPWG4ThreeJets);
cc636095 251 printf(printMask,"PWG4 QGSep",iPWG4QGSep);
252 printf(printMask,"PWG4 Minijet",iPWG4Minijet);
9748e967 253 printf(printMask,"PWG4 KMeans",iPWG4KMeans);
254 printf(printMask,"PWG4 Cluster",iPWG4Cluster);
255 printf(printMask,"PWG4 Part Corr",iPWG4PartCorr);
256 printf(printMask,"PWG4 Calo QA",iPWG4CaloQA);
257 printf(printMask,"PWG4 Jet Corr",iPWG4JetCorr);
258 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
259 printf(printMask,"PWG4 Tagged",iPWG4Tagged);
260 printf(printMask,"PWG4 omega to 3 pi ",iPWG4omega3pi);
261 printf(printMask,"PWG4 Gamma Conv",iPWG4GammaConv);
17d96675 262 printf(printMask,"PWG4 Calo Conv",iPWG4CaloConv);
9748e967 263 printf(printMask,"HighPt FilterMask",kHighPtFilterMask);
3878a941 264
c38e3b95 265 //==========================================================================
266 // Connect to back-end system
267 if (!Connect(smode)) {
268 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
269 return;
270 }
271
272 // Load common libraries and set include path
273 if (!LoadCommonLibraries(smode)) {
274 ::Error("AnalysisTrain", "Could not load common libraries");
275 return;
276 }
3878a941 277
278
c38e3b95 279
280 // Make the analysis manager and connect event handlers
e84da0a5 281 AliAnalysisManager *mgr = new AliAnalysisManager("PWG4Train", "pwg4 mini train");
c38e3b95 282 if (kCommonOutputFileName.Length()>0)mgr->SetCommonFileName(kCommonOutputFileName.Data());
283 if (kProofSaveToAlien) mgr->SetSpecialOutputLocation(kProofOutdir);
4a6f59cb 284 mgr->SetNSysInfo(0);
c38e3b95 285 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
53c63663 286 if (kUseSysInfo)mgr->SetNSysInfo(kUseSysInfo);
9a5c5b1e 287 mgr->SetSkipTerminate(kSkipTerminate);
4a6f59cb 288
c38e3b95 289 // Load analysis specific libraries
290 if (!LoadAnalysisLibraries(smode)) {
291 ::Error("AnalysisTrain", "Could not load analysis libraries");
292 return;
293 }
294
295 // Create input handler (input container created automatically)
296 if (iAODanalysis) {
297 // AOD input handler
298 AliAODInputHandler *aodH = new AliAODInputHandler();
299 mgr->SetInputEventHandler(aodH);
e6993a52 300 if (iPWG4JetTasks) aodH->AddFriend(Form("deltas/%s",kDeltaAODJetName.Data()));
301 if (iPWG4PartCorr) aodH->AddFriend(Form("deltas/%s"kDeltaAODJetName.Data()));
c38e3b95 302 } else {
303 // ESD input handler
304 AliESDInputHandler *esdHandler = new AliESDInputHandler();
305 if (kUseESDTags) esdHandler->SetReadTags();
c166d299 306 esdHandler->SetReadFriends(kFALSE);
c38e3b95 307 mgr->SetInputEventHandler(esdHandler);
4a6f59cb 308 // if(iPWG4PtQATPC&& !kTrainName.Contains("pass5"))esdHandler->SetActiveBranches("ESDfriend");
c166d299 309
c38e3b95 310 }
f4d11ac8 311
c38e3b95 312 // Monte Carlo handler
313 if (kUseMC && !iAODanalysis) {
314 AliMCEventHandler* mcHandler = new AliMCEventHandler();
315 mgr->SetMCtruthEventHandler(mcHandler);
316 mcHandler->SetReadTR(kUseTR);
317 }
318 // AOD output container, created automatically when setting an AOD handler
319 if (iAODhandler) {
320 // AOD output handler
321 AliAODHandler* aodHandler = new AliAODHandler();
322 aodHandler->SetOutputFileName("AliAOD.root");
6408fe42 323 aodHandler->SetFillAODforRun(kFillAOD);
c38e3b95 324
325 mgr->SetOutputEventHandler(aodHandler);
121e4bd5 326 //
c38e3b95 327 if (iAODanalysis) {
328
329 // aodHandler->SetCreateNonStandardAOD();
330 // if (iJETAN)aodHandler->SetOutputFileName(kDeltaAODJetName.Data());
331 }
332 AliAnalysisDataContainer * cout_aod = mgr->GetCommonOutputContainer();
333 cout_aod->SetSpecialOutput();
334 }
335 // Debugging if needed
b03b08a3 336
3878a941 337 if (kUseDebug){
338 mgr->SetDebugLevel(3);
339 }
4721d8c5 340 if(kUseSysInfo>0){
341 mgr->RegisterExtraFile("syswatch.root");
342 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
343 kGridMergeExclude += "syswatch.root";
344 }
b03b08a3 345 else{
346 AliLog::SetGlobalLogLevel(AliLog::kError);
347 }
46534866 348
349
c38e3b95 350 //==========================================================================
351 // Create the chain. In this example it is created only from ALIEN files but
352 // can be done to work in batch or grid mode as well.
353 TChain *chain = CreateChain(smode, plugin_mode);
354
355 //==========================================================================
356 // Load the tasks configuration macros for all wagons. These files are supposed now to be
357 // in the current workdir, but in AliEn they will be in the file catalog,
358 // mapped from AliRoot and pecified in the jdl input list.
359
360 // For now connection to top input container and common AOD output container
361 // is done in this macro, but in future these containers will be connected
362 // from each task configuration macro.
cfd02305 363
364 //
365 // Tender and supplies. Needs to be called for every event.
366 //
367 if (useTender) {
368 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/TenderSupplies/AddTaskTender.C");
369 AliAnalysisTaskSE *tender = AddTaskTender(kTRUE);
370 // tender->SelectCollisionCandidates();
371 tender->SetDebugLevel(2);
372 }
373
374
375
e84da0a5 376 if(iPhysicsSelection && !iAODanalysis){
d2e6cdd5 377 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
d8f81b37 378 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kIsMC,kTRUE,kTRUE); // last flag also adds information on
e84da0a5 379 }
380
c38e3b95 381 if (iESDfilter && !iAODanalysis) {
382 // ESD filter task configuration.
ebad39a9 383 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskESDFilterPWG4Train.C");
c38e3b95 384 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilter(kUseKinefilter,kUseMuonfilter);
17d96675 385 taskesdfilter->SetEnableFillAOD(kFALSE);
4721d8c5 386 if(kIsMC){
387 mgr->RegisterExtraFile("pyxsec_hists.root");
388 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
389 kGridMergeExclude += "pyxsec_hists.root";
390
391 }
c38e3b95 392 }
393
394 // AOD tags
395 if (kUseAODTags) {
396 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
397 mgr->AddTask(tagTask);
398 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
399 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
400 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
401 mgr->ConnectOutput(tagTask, 1, coutTags);
402 }
403
404 // Jet analysis
405 if (iJETAN) {
406 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJets.C");
407 AliAnalysisTaskJets *taskjets = 0;
408 if(iJETAN&1)taskjets = AddTaskJets(kHighPtFilterMask);
b53f2e4f 409 if(iJETAN&2){
410 UInt_t selection = 0;
17d96675 411 if(!kFillAOD){
412 selection = 0xffffff&~(1<<13)&~(1<<5)&~(1<<6); // switch OFF DA and all R = 0.7 to save processing time
413 selection &= ~(1<<1)&~(1<<2)&~(1<<4)&~(1<<6)&~(1<<8)&~(1<<10)&~(1<<12);
414 }
415 else {
416 selection = 0xffffff&~(1<<13)&~(1<<5)&~(1<<6); // switch OFF DA and all R = 0.7 to save processing time;
417 selection &= ~(1<<1)&~(1<<2)&~(1<<4)&~(1<<6)&~(1<<8)&~(1<<10)&~(1<<12);
418 }
b53f2e4f 419 AddTaskJetsDelta(kDeltaAODJetName.Data(),kHighPtFilterMask,kUseAODMC,selection);
e0c120d9 420 AddTaskJets("AOD","FASTKT",0.2,kHighPtFilterMask);
b53f2e4f 421 }
c38e3b95 422 if (!taskjets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
423 }
424
bd80a748 425 if(iPWG4Cluster){
426 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCluster.C");
427 AliAnalysisTaskJetCluster *taskCl = 0;
428 if(iPWG4Cluster&1){
8ecf60e0 429 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"KT",0.4,0,1); // this one is for the background jets
430 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"KT",0.5,0,1); // this one is for the background jets
431 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"KT",0.6,0,1); // this one is for the background jets
432 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"KT",0.7,0,1); // this one is for the background jets
433
bd80a748 434 if (!taskCl) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCluster cannot run for this train conditions - EXCLUDED");
435 }
436 if(iPWG4Cluster&2){
437 UInt_t selection = 0;
438 if(!iAODanalysis) selection = 0xffffff;
439 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
440 selection&=~(1<<4); // exluded R = .04 already the dafault
441 AddTaskJetClusterDelta(kHighPtFilterMask,kUseAODMC,iPhysicsSelection,"KT",selection);
442 }
443 if(iPWG4Cluster&4){
444 UInt_t selection = 0;
445 if(!iAODanalysis){
446 selection = 0xffffff;
447 selection &= ~(1<<1)&~(1<<3)&~(1<<5)&~(1<<7)&~(1<<9);
448 }
449 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
450 AddTaskJetClusterDelta(kHighPtFilterMask,kUseAODMC,iPhysicsSelection,"ANTIKT",selection);
8ecf60e0 451 // AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"ANTIKT",0.4,0,1);
bd80a748 452
453 }
454 }
455
c38e3b95 456 if (iDIJETAN) {
457 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskDiJets.C");
458 AliAnalysisTaskDiJets *taskdijets = 0;
82ebd295 459 if(iDIJETAN&1)taskdijets = AddTaskDiJets();
c38e3b95 460 if (!taskdijets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
82ebd295 461 if(iDIJETAN&2){
462 taskdijets = AddTaskDiJets("jetsAOD_CDF07");
463 taskdijets = AddTaskDiJets("jetsAOD_DA07");
464 taskdijets = AddTaskDiJets("jetsAOD_FASTJET07");
465 taskdijets = AddTaskDiJets("jetsAOD_FASTKT07");
466 taskdijets = AddTaskDiJets("jetsAOD_SISCONE07");
467 taskdijets = AddTaskDiJets("jetsAOD_UA107");
468 }
c38e3b95 469 }
470
c38e3b95 471 if(iPWG1QASym){
5dbdc61f 472 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskQAsym.C");
c38e3b95 473 AliAnalysisTaskQASym *taskQASym = AddTaskQAsym(-1);
474 if (!taskQASym) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQASym cannot run for this train conditions - EXCLUDED");
121e4bd5 475 }
c38e3b95 476
121e4bd5 477
478
479 if(iPWG4TmpSourceSara){
480 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskEta.C");
481 AliAnalysisTaskEta *taskEta = AddTaskEta();
482 if (!taskEta) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskEta cannot run for this train conditions - EXCLUDED");
c38e3b95 483 }
484
aba42fcb 485 if(iPWG4Fragmentation){
486 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFragmentationFunction.C");
8be7acf2 487 AliAnalysisTaskFragmentationFunction *taskFrag = 0;
488 if(kUseAODMC){
489 taskFrag = AddTaskFragmentationFunction(1<<1,kHighPtFilterMask);
490 taskFrag = AddTaskFragmentationFunction(1<<2,kHighPtFilterMask);
5fde4a38 491 // taskFrag = AddTaskFragmentationFunction(1<<3,kHighPtFilterMask);
cfd02305 492 taskFrag = AddTaskFragmentationFunction(1<<5,kHighPtFilterMask);
493 taskFrag = AddTaskFragmentationFunction(1<<11); // w/o acceptance cuts
c2658535 494 taskFrag = AddTaskFragmentationFunction(1<<12); // with acceptance cuts
495 // anti-kt
496 taskFrag = AddTaskFragmentationFunction(1<<21); // w/o acceptance cuts
497 taskFrag = AddTaskFragmentationFunction(1<<22); // with acceptance cuts
498
8be7acf2 499 }
500 else{
501 taskFrag = AddTaskFragmentationFunction(1<<0,kHighPtFilterMask);
c2658535 502 taskFrag = AddTaskFragmentationFunction(1<<10,kHighPtFilterMask);
503 taskFrag = AddTaskFragmentationFunction(1<<20,kHighPtFilterMask);
8be7acf2 504 }
505
aba42fcb 506 if (!taskFrag) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskFragmentationFunction cannot run for this train conditions - EXCLUDED");
c166d299 507 }
508
c580ebbb 509
9f77f0ce 510 if(iPWG4JetChem){
511 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetChem.C");
512 AliAnalysisTask *taskChem = AddTaskJetChem();
c580ebbb 513 if (!taskChem) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetChem cannot run for this train conditions - EXCLUDED");
514 }
515
516
c38e3b95 517 if(iPWG4JetServices){
518 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetServices.C");
519 AliAnalysisTaskJetServices *taskjetServ = 0;
520 taskjetServ = AddTaskJetServices();
521 if (!taskjetServ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetServices cannot run for this train conditions - EXCLUDED");
53c63663 522 if(kGridRunRange[0]>0)taskjetServ->SetRunRange(kGridRunRange[0],kGridRunRange[1]);
27cdf9c4 523 else taskjetServ->SetRunRange(110000,160000);
524 taskjetServ->SetMCData(kIsMC);
dc6a7461 525 taskjetServ->SetUsePhysicsSelection((Bool_t)iPhysicsSelection);
9f77f0ce 526 taskjetServ->SetDebugLevel(0);
c38e3b95 527 }
528
c38e3b95 529 if(iPWG4JetSpectrum){
530 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetSpectrum2.C");
531 AliAnalysisTaskJetSpectrum2 *taskjetSpectrum = 0;
b53f2e4f 532 if(iPWG4JetSpectrum&1){
17d96675 533 taskjetSpectrum = AddTaskJetSpectrum2("jets","","",kHighPtFilterMask,iPhysicsSelection);
e6993a52 534 if(!iAODanalysis){
d3af0232 535 // taskjetSpectrum = AddTaskJetSpectrum2("jets","tracks32",32,iPhysicsSelection); // tmp hack to give it a different name
4d5d766e 536 // taskjetSpectrum = AddTaskJetSpectrum2("jets","64",64,iPhysicsSelection);
46534866 537
5ad2b067 538 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","clustersAOD_ANTIKT04","",kHighPtFilterMask,iPhysicsSelection);
539
f2dd0695 540 if(kIsMC){
17d96675 541
542 UInt_t eventSelection = AliAnalysisHelperJetTasks::kIsPileUp|AliAnalysisHelperJetTasks::kVertexIn;
543 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
544 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC_FASTJET04","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
545 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC2_FASTJET04","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
546
547 eventSelection = AliAnalysisHelperJetTasks::kIsCosmic|AliAnalysisHelperJetTasks::kVertexIn;
548 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
549 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC_FASTJET04","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
550
551 eventSelection = AliAnalysisHelperJetTasks::kNone;
552 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC2_FASTJET04","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
553 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC_FASTJET04","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
46534866 554
555 }
556 else{
17d96675 557 UInt_t eventSelection = AliAnalysisHelperJetTasks::kIsPileUp|AliAnalysisHelperJetTasks::kVertexIn;
558 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
559 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
560
561 eventSelection = AliAnalysisHelperJetTasks::kIsCosmic|AliAnalysisHelperJetTasks::kVertexIn;
562 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
563 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
f2dd0695 564 }
e6993a52 565 }
d2e6cdd5 566 if (!taskjetSpectrum) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetSpectrum2 cannot run for this train conditions - EXCLUDED");
17d96675 567 // taskjetSpectrum->SetDebugLevel(1);
b53f2e4f 568 }
d2e6cdd5 569
e6993a52 570 if(iPWG4JetSpectrum&2){
571 UInt_t selection = 0;
17d96675 572 if(!iAODanalysis){
573 selection = 0xffffff;
574 // switch off 07 radii
575 selection &= ~(1<<6)&~(1<<11)&~(1<<12)&~(1<<13)&~(1<<14);
576 }
e6993a52 577 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
e0c120d9 578 AddTaskJetSpectrum2Delta(kHighPtFilterMask,kUseAODMC,iPhysicsSelection,selection,0,kTRUE);
e6993a52 579 }
c38e3b95 580 }
58ef946c 581 if(iPWG4JCORRAN){
582 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJCORRANTask.C");
4721d8c5 583 AliJCORRANTask* corran = AddTaskJCORRAN(kDeltaAODJCORRANName.Data(),0);
58ef946c 584 if(!corran)::Warning("AnalysisTrainPWG4Jets", "AliJCORRANTask cannot run for this train conditions - EXCLUDED");
4721d8c5 585 else{
586 if(kDeltaAODJCORRANName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJCORRANName.Data());
587 }
58ef946c 588 }
589
c38e3b95 590 if(iPWG4UE){
591 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskUE.C");
592 AliAnalysisTaskUE *taskUE = 0;
593 if(iPWG4UE&1)taskUE = AddTaskUE();
594 if(iPWG4UE&2){
94ee88d4 595 taskUE =AddTaskUE("jetsAOD_CDF04","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
17d96675 596 // taskUE =AddTaskUE("jetsAOD_CDF07","CDF", "LJ", "TRANSV","MSP");
94ee88d4 597 taskUE =AddTaskUE("jetsAOD_SISCONE04","CDF", "LJ", "TRANSV","MSP");
17d96675 598 // taskUE =AddTaskUE("jetsAOD_SISCONE07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
94ee88d4 599 taskUE =AddTaskUE("jetsAOD_ICDF","CDF","LJ","TRANSV","MSP");
600 taskUE =AddTaskUE("jetsAOD_FASTKT04","CDF", "LJ", "TRANSV","MSP");
17d96675 601 // taskUE =AddTaskUE("jetsAOD_FASTKT07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
58ef946c 602 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta05", "TRANSV","MSP");
603 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta09", "TRANSV","MSP");
c38e3b95 604 }
2bb1f4ca 605
c38e3b95 606 if (!taskUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskUE cannot run for this train conditions - EXCLUDED");
607 }
e0c120d9 608
609 if(iPWG4LeadingUE){
610 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskLeadingTrackUE.C");
611 AliAnalysisTaskLeadingTrackUE *taskLeadingUE = AddTaskLeadingTrackUE(kUseMC);
612 if (!taskLeadingUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTasLeadingTrackkUE cannot run for this train conditions - EXCLUDED");
27cdf9c4 613 // taskLeadingUE->SetFilterBit(64);
e0c120d9 614 }
615
616
9748e967 617 if(iPWG4CorrectionsUE){
618 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCorrectionsUE.C");
619 AliAnalysisTaskCorrectionsUE *taskCorrectionsUE = 0;
620 if(iPWG4CorrectionsUE&1)taskCorrectionsUE = AddTaskCorrectionsUE("jetsAOD_NONE","CDF","MP_eta05","TRANSV","MSP",kFALSE);
621 if (!taskCorrectionsUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCorrectionsUE cannot run for this train conditions - EXCLUDED");
622 }
c38e3b95 623
624 if(iPWG4ThreeJets){
625 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskThreeJets.C");
626 AliAnalysisTaskThreeJets *taskThree = AddTaskThreeJets();
627 if(!taskThree)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskThreets cannot run for this train conditions - EXCLUDED");
628 }
cc636095 629 if(iPWG4QGSep){
630 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskQGSep.C");
631 AliAnalysisTaskQGSep *taskQGSep = AddTaskQGSep(kUseMC,iAODanalysis);
632 if(!taskQGSep)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQGSep cannot run for this train conditions - EXCLUDED");
633 }
634
635
636 if(iPWG4Minijet){
637 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskMinijet.C");
4d16db9c 638 AliAnalysisTaskMinijet *taskMini = AddTaskMinijet(-1,"esd",kUseMC,kGridDataSet);
cc636095 639 // if we ha highmult trigger add another task
640 if(!taskMini)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskMinjet cannot run for this train conditions - EXCLUDED");
641 }
642
643
c38e3b95 644 if(iPWG4PtQAMC){
645 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQAMC.C");
f87effcf 646 AliPWG4HighPtQAMC *taskQAMC = 0;
647 if(kUseMC){
648 if(iPWG4PtQAMC&1)taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),0);
649 if(iPWG4PtQAMC&1)taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),1);
650 }
c38e3b95 651 if (!taskQAMC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQAMC cannot run for this train conditions - EXCLUDED");
652 }
653
654 if(iPWG4PtQATPC){
655 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQATPConly.C");
10295ac3 656 AliPWG4HighPtQATPConly *taskQATPC = 0;
b1cd0099 657 if(iPWG4PtQATPC&1)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),1);
658 if(iPWG4PtQATPC&2)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),2);
10295ac3 659
660 if (!taskQATPC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQATPC cannot run for this train conditions - EXCLUDED");
c38e3b95 661 }
3878a941 662
1f329128 663 if(iPWG4Cosmics){
664 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4CosmicCandidates.C");
665
666 AliPWG4CosmicCandidates *taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(0);
667 taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(1);
668
669 if (!taskPWG4CosmicCandidates) ::Warning("AnalysisTrainPWG4Jets", "AddTaskPWG4CosmicCandidates cannot run for this train conditions - EXCLUDED");
670 }
671
672
c38e3b95 673 if(iPWG4PtSpectra){
674 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtSpectra.C");
b1cd0099 675 AliPWG4HighPtSpectra *taskPtSpectra = AddTaskPWG4HighPtSpectra(kGridDataSet.Data());
c38e3b95 676 if (!taskPtSpectra) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskPtSpectra cannot run for this train conditions - EXCLUDED");
677 }
b53f2e4f 678 if(iPWG4KMeans){
679 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskKMeans.C");
680 AliAnalysisTaskKMeans *taskKMeans = AddTaskKMeans();
681 if (!taskKMeans) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskKMenans cannot run for this train conditions - EXCLUDED");
682 }
683
c38e3b95 684 if(iPWG4PartCorr){
685 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPartCorr.C");
14526afb 686 AliAnalysisTaskParticleCorrelation *taskpartcorrPHOS = AddTaskPartCorr("AOD", "PHOS",kFALSE,kIsMC);
c38e3b95 687 if (!taskpartcorrPHOS) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation PHOS cannot run for this train conditions - EXCLUDED");
14526afb 688 AliAnalysisTaskParticleCorrelation *taskpartcorrEMCAL = AddTaskPartCorr("AOD", "EMCAL",kFALSE,kIsMC);
c38e3b95 689 if (!taskpartcorrEMCAL) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation EMCAL cannot run for this train conditions - EXCLUDED");
4721d8c5 690 if(kDeltaAODPartCorrName.Length()>0)mgr->RegisterExtraFile(kDeltaAODPartCorrName.Data());
121e4bd5 691 }
692
d2e6cdd5 693 if(iPWG4CaloQA){
694 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/QA/AddTaskCalorimeterQA.C");
9748e967 695 AliAnalysisTaskParticleCorrelation *taskcaloQA = AddTaskCalorimeterQA("ESD",kFALSE,kIsMC,kCaloQAOutputFileName.Data());
d2e6cdd5 696 if(!taskcaloQA)::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation QA cannot run - EXCLUDED");
aba42fcb 697 // if(kCaloQAOutputFileName.Length()>0)mgr->RegisterExtraFile(kCaloQAOutputFileName.Data());
d2e6cdd5 698 }
699
d2e6cdd5 700 if(iPWG4JetCorr){
701 // using namespace JetCorrelHD;
d3af0232 702 TString cdir = gSystem->WorkingDirectory();
703 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
d2e6cdd5 704 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCorrel.C");
705 AliAnalysisTaskJetCorrel *taskjetcorr = AddTaskJetCorrel();
d3af0232 706 gSystem->ChangeDirectory(cdir);
c166d299 707 if (!taskjetcorr) ::Warning("AnalysisTrainNew", "AliAnalysisTaskJetCorrel cannot run for this train conditions - EXCLUDED");
d2e6cdd5 708 }
709
911a740f 710 if(iPWG4Tagged){
711 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskTaggedPhotons.C");
712 AliAnalysisTaskTaggedPhotons * taskTagged = AddTaskTaggedPhotons(kFALSE); // EMCAL
58ef946c 713 taskTagged = AddTaskTaggedPhotons(kTRUE); // PHOS
911a740f 714 if (!taskTagged) ::Warning("AnalysisTrainNew", "AliAnalysisTaskTaggedPhotons cannot run for this train conditions - EXCLUDED");
715 }
121e4bd5 716 if (iPWG4omega3pi) {
717 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskomega3pi.C");
718 AliAnalysisTaskOmegaPi0PiPi *taskomega3pi = AddTaskomega3pi();
719 if (!taskomega3pi) ::Warning("AnalysisTrainNew", "AliAnalysisTaskomega3pi cannot run\
720 for these train conditions - EXCLUDED");
721 }
722
53c63663 723 // PWG4 gamma conversion analysis
724 if (iPWG4GammaConv) {
725 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskGammaConversion.C");
726 TString cdir = gSystem->WorkingDirectory();
727 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
728 // TString gcArguments = "-run-on-train -run-jet -run-chic -run-neutralmeson -run-cf";
58ef946c 729 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
730 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
b0a36f28 731 TString gcArguments = "-run-on-train -run-jet -run-omega-meson -use-own-xyz -run-neutralmeson -no-aod";
27cdf9c4 732 // TString kGCAnalysisCutSelectionId="9003562000100310";
cfd02305 733 // TString kGCAnalysisCutSelectionId="9003562000100312";
734 // gcArguments.Append(Form(" -set-cut-selection %s ",kGCAnalysisCutSelectionId.Data()));
53c63663 735 if(!kIsMC)gcArguments += " -mc-off";
736 AliAnalysisTaskGammaConversion * taskGammaConversion = AddTaskGammaConversion(gcArguments,mgr->GetCommonInputContainer());
737 gSystem->ChangeDirectory(cdir);
121e4bd5 738 taskGammaConversion->SelectCollisionCandidates();
53c63663 739 if (!taskGammaConversion) ::Warning("AnalysisTrainNew", "AliAnalysisTaskGammaConversion cannot run for these train conditions - EXCLUDED");
740 }
741
17d96675 742 if (iPWG4CaloConv) {
743 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCaloConv.C");
744 AliAnalysisTaskCaloConv * taskCaloConv = AddTaskCaloConv();
745 if (!taskCaloConv) ::Warning("AnalysisTrainNew", "AliAnalysisTaskCaloConv cannot run for these train conditions - EXCLUDED");
746 }
747
748
3878a941 749
c38e3b95 750 //==========================================================================
751 // FOR THE REST OF THE TASKS THE MACRO AddTaskXXX() is not yet implemented/
752 // Run the analysis
753 //
754 if (kPluginUse) {
755 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
756 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
757 }
758
759 if (mgr->InitAnalysis()) {
760 mgr->PrintStatus();
761 // if (kSaveTrain || strlen(config_file)) gSystem->ChangeDirectory(kTrainName);
e84da0a5 762 if (!strcmp(plugin_mode,"submit")&&smode=="GRID"){
c38e3b95 763 TString alien_workdir = gGrid->GetHomeDirectory();
764 if (iAODanalysis) alien_workdir += "analysisAOD";
765 else alien_workdir += "analysisESD";
3878a941 766 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
c38e3b95 767 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
e84da0a5 768 printf("=== AnalysisTrainPWG4Jets:: Registering jdl in the work directory alien://%s/%s, should be done by the manager! ===\n",
c38e3b95 769 alien_workdir.Data(),gridhandler->GetGridOutputDir());
58ef946c 770
771 TString dest;
772 dest = Form("%s/%s/%s.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
773 if(AliAnalysisAlien::FileExists(dest.Data())){
774 // Printf("%s exist on grid removing...",dest.Data());
775 // gGrid->Rm(dest.Data());
776 }
777 TFile::Cp(Form("file:%s.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
4721d8c5 778
779
780 TString dest;
781 dest = Form("%s/%s/%s_merge.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
782 if(AliAnalysisAlien::FileExists(dest.Data())){
783 // Printf("%s exist on grid removing...",dest.Data());
784 // gGrid->Rm(dest.Data());
785 }
786 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
787
58ef946c 788
73b7619a 789 dest = Form("%s/rootfiles/STEER/LQ1dRef_v1.root",gGrid->GetHomeDirectory());
58ef946c 790 if(AliAnalysisAlien::FileExists(dest.Data())){
791 Printf("%s exist on grid removing...",dest.Data());
792 gGrid->Rm(dest.Data());
793 }
794 TFile::Cp(Form("file:%s/STEER/LQ1dRef_v1.root",
9748e967 795 gSystem->ExpandPathName("$ALICE_ROOT")),Form("alien://%s",dest.Data()));
c38e3b95 796 }
3878a941 797 AliLog::SetGlobalLogLevel(AliLog::kError);
c166d299 798 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
799 TFile * fM = TFile::Open("manager_local.root","RECREATE");
800 mgr->Write();
801 fM->Close();
802 }
46534866 803
804 // grmpf, aliroot error handler overwrites root
805 gErrorIgnoreLevel = kErrorIgnoreLevel;
806 if(gErrorIgnoreLevel>3000) AliLog::SetGlobalLogLevel(AliLog::kFatal);
c38e3b95 807 StartAnalysis(smode, chain);
4a6f59cb 808 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
809 for(int i = 0;i < mgr->GetTopTasks()->GetEntries();i++){
810 mgr->ProfileTask(i);
811 }
812 }
c38e3b95 813 if (!strcmp(plugin_mode, "offline")&&smode=="GRID"){
e84da0a5 814 // Offline mode path files
815 // PatchJDL();
816 PatchAnalysisMacro();
817 }
c38e3b95 818
e84da0a5 819 if (kSaveTrain && smode=="GRID") {
820 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
821 TString alien_workdir = gGrid->GetHomeDirectory();
822 if (iAODanalysis) alien_workdir += "analysisAOD";
3878a941 823 else alien_workdir += "analysisESD";
824 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
e84da0a5 825 // kGridOutdir = gridhandler->GetGridOutputDir();
826 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
c38e3b95 827 alien_workdir.Data());
e84da0a5 828 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data())))
829 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
830 if (strcmp(plugin_mode, "test"))
831 TFile::Cp(Form("file:%sConfig.C",kTrainName.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
832 }
833 }
c38e3b95 834}
835
836//______________________________________________________________________________
837void StartAnalysis(const char *mode, TChain *chain) {
838// Start analysis.
839 Int_t imode = -1;
840 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
841 if (!strcmp(mode, "LOCAL")) imode = 0;
842 if (!strcmp(mode, "PROOF")) imode = 1;
843 if (!strcmp(mode, "GRID")) imode = 2;
844 switch (imode) {
845 case 0:
846 if (!chain) {
847 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
848 return;
849 }
82ebd295 850 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
c38e3b95 851 return;
852 case 1:
853 if (!kProofDataSet.Length()) {
854 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "kProofDataSet is empty");
855 return;
856 }
857 mgr->StartAnalysis(mode, kProofDataSet, kProofEvents,kProofOffset);
858 return;
859 case 2:
860 if (kPluginUse) {
861 if (!mgr->GetGridHandler()) {
862 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Grid plugin not initialized");
863 return;
864 }
ebad39a9 865 mgr->StartAnalysis("grid",chain,kNumberOfEvents);
c38e3b95 866 } else {
867 if (!chain) {
868 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
869 return;
870 }
871 mgr->StartAnalysis(mode, chain);
ebad39a9 872 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
c38e3b95 873 }
874 return;
875 }
876}
877
878//______________________________________________________________________________
879void CheckModuleFlags(const char *mode) {
880// Checks selected modules and insure compatibility
881 Int_t imode = -1;
882 if (!strcmp(mode, "LOCAL")) imode = 0;
883 if (!strcmp(mode, "PROOF")) imode = 1;
884 if (!strcmp(mode, "GRID")) imode = 2;
885
886
e84da0a5 887 if (kUseCPAR) {
888 kPluginAliRootVersion = ""; // NO aliroot if we use CPAR
889 }
c38e3b95 890
891 if (imode==1) {
892 if (!kUsePAR) {
893 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
894 kUsePAR = kTRUE;
895 }
896 }
897 if (imode != 2) {
898 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
899 kPluginUse = kFALSE;
900 }
901
902
903 if(!kIsMC){
904 // switch off anthin related to MC
905 kUseMC = 0;
906 kUseAODMC = 0;
907 kUseTR = kFALSE;
908 }
909
910 if (iAODanalysis) {
911 // AOD analysis
912 if (kUseMC)
913 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
914 if (kUseAODTags)
915 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
916 kUseMC = kFALSE;
917 kUseTR = kFALSE;
918 kUseAODTags = kFALSE;
919 if (iESDfilter)
920 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
921 iESDfilter = 0;
e84da0a5 922 if (iPhysicsSelection)
923 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "Physics Selection disabled in analysis on AOD's");
924 iPhysicsSelection = 0;
c38e3b95 925 if (!iAODhandler) {
926 if (iJETAN)
927 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
928 iJETAN = 0;
929 iDIJETAN = 0;
930 }
931 // Disable tasks that do not work yet on AOD data
58ef946c 932 if(iPWG4JCORRAN)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 JCORRAN disabled in analysis on AOD's");
4d62ae1a 933 iPWG4JCORRAN = 0;
c38e3b95 934 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
935 iPWG4PtQAMC = 0;
936 if( iPWG4PtQATPC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtTPC disabled in analysis on AOD's");
937 iPWG4PtQATPC = 0;
1f329128 938 if( iPWG4Cosmics)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Comics disabled in analysis on AOD's");
939 iPWG4Cosmics = 0;
940
c38e3b95 941 if( iPWG4PtSpectra)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
942 iPWG4PtSpectra = 0;
b53f2e4f 943 if(iPWG4KMeans)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4KMeans disabled on AOD's");
944 iPWG4KMeans = 0;
d2e6cdd5 945 if (iPWG4JetCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4Jetcorr disabled on AOD's");
946 iPWG4JetCorr = 0;
c38e3b95 947 if (iPWG4PartCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
948 iPWG4PartCorr = 0;
d2e6cdd5 949 if (iPWG4CaloQA)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4CaloQA disabled on AOD's");
950 iPWG4CaloQA = 0;
911a740f 951 if (iPWG4Tagged)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4tagged disabled on AOD's");
952 iPWG4Tagged = 0;
121e4bd5 953 if (iPWG4omega3pi)
954 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
955 iPWG4omega3pi = 0;
c38e3b95 956 if(iPWG1QASym)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG1 QA Sym disabled in analysis on AOD's");
53c63663 957 if (iPWG4GammaConv)::Info("AnalysisPWG4Jets.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's");
958 iPWG4GammaConv = 0;
c38e3b95 959 iPWG1QASym = 0;
960 } else {
961 // ESD analysis
962 if (!kUseMC){
963 kUseTR = kFALSE;
964
965 if(kUseKinefilter)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Kine Filter disabled in analysis without MC");
966 kUseKinefilter = kFALSE;
967 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis without MC");
968 iPWG4PtQAMC = 0;
9748e967 969 if( iPWG4CorrectionsUE)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 CorrectionsUE disabled in analysis without MC");
970 iPWG4CorrectionsUE = 0;
c38e3b95 971 }
972 if (!kUseTR) {
c166d299 973 if(iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "iPWG4QATPCMC disabled if not reading track references");
b03b08a3 974 iPWG4PtQAMC = 0;
c38e3b95 975 }
e84da0a5 976 if (iJETAN){
977 iESDfilter=1;
978 }
c38e3b95 979 if (!iESDfilter){
980 kUseKinefilter = kFALSE;
981 kUseMuonfilter = kFALSE;
982 }
983 if(!iJETAN){
cc636095 984 iPWG4JetSpectrum = iPWG4UE = iPWG4CorrectionsUE = iPWG4ThreeJets = iPWG4QGSep = iDIJETAN = 0;
c38e3b95 985 }
986 }
cc636095 987 iPWG4JetTasks = iPWG4JetServices||iPWG4JetSpectrum||iPWG4UE||iPWG4LeadingUE||iPWG4PtQAMC||iPWG4PtSpectra||iPWG4PtQATPC||iPWG4Cosmics||iPWG4ThreeJets||iPWG4QGSep||iPWG4JetChem||iPWG4Minijet||iPWG4Fragmentation;
d2e6cdd5 988 iPWG4PartCorrLibs = iPWG4PartCorr||iPWG4Tagged||iPWG4CaloQA;
17d96675 989 iPWG4GammaConvLib = iPWG4GammaConv||iPWG4CaloConv;
990
991
992 iEMCUtilLibs = iPWG4PartCorrLibs||iPWG4JCORRAN||iPWG4GammaConvLib;
e6993a52 993 iJETANLib = iPWG4JetTasks||iJETAN||iDIJETAN;
17d96675 994
c38e3b95 995 if (iESDfilter) {iAODhandler=1;}
996 if (kUseKinefilter && !kUseMC) kUseKinefilter = kFALSE;
997 if (kUseAODTags && !iAODhandler) kUseAODTags = kFALSE;
998
999
1000
1001}
1002
1003//______________________________________________________________________________
1004Bool_t Connect(const char *mode) {
1005// Connect <username> to the back-end system.
1006 Int_t imode = -1;
1007 if (!strcmp(mode, "LOCAL")) imode = 0;
1008 if (!strcmp(mode, "PROOF")) imode = 1;
1009 if (!strcmp(mode, "GRID")) imode = 2;
1010 TString username = gSystem->Getenv("alien_API_USER");
1011 switch (imode) {
1012 case 0:
1013 break;
1014 case 1:
1015 if (!username.Length()) {
1016 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1017 1. Have called: alien-token-init <username>\n \
1018 2. Have called: >source /tmp/gclient_env_$UID");
1019 return kFALSE;
1020 }
1021 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
1022 username.Data(), kProofCluster.Data());
1023 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
1024// TProof::Open(Form("%s@%s:31093", username.Data(), kProofCluster.Data()));
1025 TProof::Open(Form("%s@%s", username.Data(), kProofCluster.Data()));
1026 if (!gProof) {
1027 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
1028 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
1029 return kFALSE;
1030 }
1031 if(kProofClearPackages)gProof->ClearPackages();
1032
1033 if(kProofSaveToAlien){
1034 TGrid::Connect("alien://");
1035 if (gGrid) {
1036 TString homedir = gGrid->GetHomeDirectory();
1037 TString workdir = homedir + kTrainName;
1038 if (!gGrid->Cd(workdir)) {
1039 gGrid->Cd(homedir);
1040 if (gGrid->Mkdir(workdir)) {
1041 gGrid->Cd(kTrainName);
1042 ::Info("AnalysisTrainPWG4Jets::Connect()", "Directory %s created", gGrid->Pwd());
1043 }
1044 }
1045 gGrid->Mkdir("proof_output");
1046 gGrid->Cd("proof_output");
1047 kProofOutdir = Form("alien://%s", gGrid->Pwd());
1048 }
1049 }
1050 break;
1051 case 2:
1052 if (!username.Length()) {
1053 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1054 1. Have called: alien-token-init <username>\n \
1055 2. Have called: >source /tmp/gclient_env_$UID");
1056 return kFALSE;
1057 }
1058 if (kPluginUse && !gSystem->Getenv("alien_CLOSE_SE")) {
1059 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode),
1060 "When using the AliEn plugin it is preferable to define the \
1061 variable alien_CLOSE_SE in your environment.");
1062 return kFALSE;
1063 }
1064 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to AliEn ...",
1065 username.Data());
1066 TGrid::Connect("alien://");
1067 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
1068 break;
1069 default:
1070 ::Error("AnalysisTrainPWG4Jets.C::Connect", "Unknown run mode: %s", mode);
1071 return kFALSE;
1072 }
1073 ::Info("AnalysisTrainPWG4Jets.C::Connect","Connected in %s mode", mode);
1074 return kTRUE;
1075}
1076
1077//______________________________________________________________________________
1078Bool_t LoadCommonLibraries(const char *mode)
1079{
1080// Load common analysis libraries.
1081 Int_t imode = -1;
1082 if (!strcmp(mode, "LOCAL")) imode = 0;
1083 if (!strcmp(mode, "PROOF")) imode = 1;
1084 if (!strcmp(mode, "GRID")) imode = 2;
1085 if (!gSystem->Getenv("ALICE_ROOT")) {
ebad39a9 1086 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Analysis train requires that ALICE_ROOT is set to pick up Configurations");
c38e3b95 1087 return kFALSE;
1088 }
1089 Bool_t success = kTRUE;
1090 // ROOT libraries
1091 gSystem->Load("libTree.so");
1092 gSystem->Load("libGeom.so");
1093 gSystem->Load("libVMC.so");
1094 gSystem->Load("libPhysics.so");
1095
1096 // Load framework classes. Par option ignored here.
1097 switch (imode) {
1098 case 0:
1099 case 2:
1100 if (kUseCPAR) {
1101 success &= LoadLibrary("STEERBase", mode, kTRUE);
1102 success &= LoadLibrary("ESD", mode, kTRUE);
1103 success &= LoadLibrary("AOD", mode, kTRUE);
1104 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
1105 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
1106 success &= LoadLibrary("CORRFW", mode, kTRUE);
1107 } else {
1108 success &= LoadLibrary("libSTEERBase.so", mode);
1109 success &= LoadLibrary("libESD.so", mode);
1110 success &= LoadLibrary("libAOD.so", mode);
1111 success &= LoadLibrary("libANALYSIS.so", mode);
1112 success &= LoadLibrary("libANALYSISalice.so", mode);
1113 success &= LoadLibrary("libCORRFW.so", mode);
1114 gROOT->ProcessLine(".include $ALICE_ROOT/include");
1115 }
1116 break;
1117 case 1:
1118 Int_t ires = -1;
1119 if (kProofUseAFPAR && !gSystem->AccessPathName(kProofAFversion)) ires = gProof->UploadPackage(kProofAFversion);
1120 if (ires < 0) {
1121 success &= LoadLibrary("STEERBase", mode);
1122 success &= LoadLibrary("ESD", mode);
1123 success &= LoadLibrary("AOD", mode);
1124 success &= LoadLibrary("ANALYSIS", mode);
1125 success &= LoadLibrary("ANALYSISalice", mode);
1126 success &= LoadLibrary("CORRFW", mode);
1127 } else {
1128 ires = gProof->EnablePackage(kProofAFversion);
1129 if (ires<0) success = kFALSE;
1130 success &= LoadLibrary("CORRFW", mode);
1131 }
1132 break;
1133 default:
1134 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
1135 return kFALSE;
1136 }
1137 if (success) {
1138 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
1139 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
1140 gSystem->GetIncludePath());
1141 } else {
1142 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: FAILED");
1143 }
1144
1145 return success;
1146}
1147
1148//______________________________________________________________________________
1149Bool_t LoadAnalysisLibraries(const char *mode)
1150{
1151// Load common analysis libraries.
9748e967 1152 Bool_t success = kTRUE;
cfd02305 1153 if (useTender) {
1154 if (!LoadLibrary("TENDER", mode, kTRUE) ||
1155 !LoadLibrary("TENDERSupplies", mode, kTRUE)) return kFALSE;
1156 }
c38e3b95 1157 if (iESDfilter) {
b0a36f28 1158 /*
c38e3b95 1159 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
1160 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
b0a36f28 1161 */
c38e3b95 1162 }
1163 // JETAN
e6993a52 1164 if (iJETANLib) {
b53f2e4f 1165 // this part needs some rework in case we do not need the fastjed finders for processing
1166 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
c38e3b95 1167 if (!strcmp(mode, "PROOF")){
ef1e462f 1168 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libCGAL.so\"\)", kTRUE);
c38e3b95 1169 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libfastjet.so\"\)", kTRUE);
1170 // problem when loading siscone copiled with different gcc version??
1171 // gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libsiscone.so\"\)", kTRUE);
1172 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libSISConePlugin.so\"\)", kTRUE);
1173 }
b53f2e4f 1174 if(!kUsePAR){
e84da0a5 1175 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
1176 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
1177 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
1178 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
1179 }
1180 else{
1181 // par files plus FASTJET needs some extra work... need to change
1182 // the loading sequence in the auto generated .C file
1183 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
1184 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
1185 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
1186 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
1187 }
c38e3b95 1188 if (!LoadLibrary("FASTJETAN", mode, kTRUE)) return kFALSE;
1189 }
1190 if(iPWG4JetTasks){
c38e3b95 1191 if (!LoadLibrary("PWG4JetTasks", mode, kTRUE)) return kFALSE;
1192 }
58ef946c 1193
c38e3b95 1194 if(iPWG1QASym){
99bfd7f7 1195 if (!LoadSource(Form("%s/PWG1/AliAnalysisTaskQASym.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
c38e3b95 1196 }
121e4bd5 1197 if(iPWG4TmpSourceSara){
c166d299 1198 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
121e4bd5 1199 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskEta.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1200 }
58ef946c 1201
9f77f0ce 1202 /*
1203 if(iPWG4JetChem){
c580ebbb 1204 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
1205 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskJetChem.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1206 }
9f77f0ce 1207 */
c166d299 1208
4721d8c5 1209 if(iEMCUtilLibs){
1210 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
1211 !LoadLibrary("PHOSUtils", mode, kTRUE)) return kFALSE;
1212 }
1213
911a740f 1214 if (iPWG4PartCorrLibs) {
4721d8c5 1215 if (!LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
c38e3b95 1216 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
1217 }
4721d8c5 1218 if(iPWG4JCORRAN){
1219 // PWG4 particle correlations
1220 if(!LoadLibrary("PWG4JCORRAN",mode,kTRUE))return kFALSE;
1221 }
d2e6cdd5 1222 if (iPWG4JetCorr) {
1223 if (!LoadLibrary("PWG4JetCorrel", mode, kTRUE)) return kFALSE;
1224 }
121e4bd5 1225 if (iPWG4omega3pi) {
1226 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
1227 }
17d96675 1228 if (iPWG4GammaConvLib) {
53c63663 1229 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
1230 }
c38e3b95 1231
1232 ::Info("AnalysisTrainPWG4Jets.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
1233 return kTRUE;
1234}
1235
1236//______________________________________________________________________________
1237Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
1238{
1239// Load a module library in a given mode. Reports success.
1240 Int_t imode = -1;
1241 Int_t result;
1242 TString smodule(module);
1243 if (!strcmp(mode, "LOCAL")) imode = 0;
1244 if (!strcmp(mode, "PROOF")) imode = 1;
1245 if (!strcmp(mode, "GRID")) imode = 2;
1246 TString mod(module);
1247 if (!mod.Length()) {
1248 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Empty module name");
1249 return kFALSE;
1250 }
1251 // If a library is specified, just load it
1252 if (smodule.EndsWith(".so")) {
1253 mod.Remove(mod.Index(".so"));
1254 result = gSystem->Load(mod);
1255 if (result < 0) {
1256 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load library %s", module);
1257 return kFALSE;
1258 }
1259 if (rec) anaLibs += Form("%s.so ",mod.Data());
e84da0a5 1260 if (rec) anaLibsExtra += Form("%s.so ",mod.Data());
c38e3b95 1261 return kTRUE;
1262 }
1263 // Check if the library is already loaded
1264 if (strlen(gSystem->GetLibraries(Form("%s.so", module), "", kFALSE)) > 0)
1265 return kTRUE;
1266 switch (imode) {
1267 case 0:
1268 case 2:
1269 if (kUsePAR) {
1270 result = SetupPar(module);
1271 if (rec) anaPars += Form("%s.par ", module);
1272 } else {
1273 result = gSystem->Load(Form("lib%s.so", module));
1274 if (rec) anaLibs += Form("lib%s.so ", module);
1275 }
1276 break;
1277 case 1:
1278 if(!gSystem->AccessPathName(module)){
1279 ::Info("AnalysisTrainPWG4Jets.C::LoadLibrary", "Removing directory %s",module);
1280 gSystem->Exec(Form("rm -rf %s",module));
1281 }
1282 result = gProof->UploadPackage(module);
1283 if (result<0) {
1284 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
1285 if (result<0) {
1286 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
1287 return kFALSE;
1288 }
1289 }
1290 result = gProof->EnablePackage(module);
1291 break;
1292 default:
1293 return kFALSE;
1294 }
1295 if (result < 0) {
1296 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load module %s", module);
1297 return kFALSE;
1298 }
1299 return kTRUE;
1300}
1301
1302
1303
1304//______________________________________________________________________________
1305Bool_t LoadSource(const char *source, const char *mode, Bool_t rec=kFALSE)
1306{
1307// Load a module library in a given mode. Reports success.
1308 Int_t imode = -1;
1309 Int_t result = -1;
1310 if (!strcmp(mode, "LOCAL")) imode = 0;
1311 if (!strcmp(mode, "PROOF")) imode = 1;
1312 if (!strcmp(mode, "GRID")) imode = 2;
1313 TString ssource(source);
1314 TString basename = gSystem->BaseName(ssource.Data());
1315 if (!ssource.Length()) {
1316 ::Error("AnalysisTrainPWG4Jets.C::LoadSource", "Empty task name");
1317 return kFALSE;
1318 }
4d62ae1a 1319 // we have a source code so compile it
c38e3b95 1320 if (ssource.EndsWith(".cxx")) {
1321 // need to copy it here other wise the path is also used on grid...
1322 ssource.Remove(ssource.Index(".cxx"));
1323 basename.Remove(basename.Index(".cxx"));
1324 Printf("LoadSources:: Copying... path %s{cxx,h}",ssource.Data());
1325 gSystem->Exec(Form("cp %s.cxx . ",ssource.Data()));
1326 gSystem->Exec(Form("cp %s.h . ",ssource.Data()));
1327 // Path to code
1328 // only needed for local compilation, in grid and proof mode
1329 // the task headers are uploaded
1330 // path.Remove(path.Index(gSystem->BaseName(path.Data())));
1331 // Printf("LoadSources:: Including path %s",path.Data());
1332 // if(path.Length()>0)gROOT->ProcessLine(Form(".include %s",path.Data()));
1333 Printf("LoadSources:: Loading... path %s",basename.Data());
1334 switch (imode) {
1335 case 0:
b53f2e4f 1336 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1337 break;
1338 case 1:
b53f2e4f 1339 result = gProof->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1340 break;
1341 case 2:
b53f2e4f 1342 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1343 if (rec){
1344 // what we want to compile
1345 anaSources += Form("%s.cxx ",basename.Data());
1346 // what we need as input...
1347 anaLibs += Form("%s.cxx %s.h ",basename.Data(),basename.Data());
1348 }
1349 break;
1350 default:
1351 return kFALSE;
1352 }
1353 }
1354 if (result < 0) {
1355 ::Error("AnalysisTrainPWG4Jets.C::LoadSources", "Could not load source %s", source);
1356 return kFALSE;
1357 }
1358 return kTRUE;
1359}
1360
1361
1362//______________________________________________________________________________
1363TChain *CreateChain(const char *mode, const char *plugin_mode)
1364{
1365// Create the input chain
1366 Int_t imode = -1;
1367 if (!strcmp(mode, "LOCAL")) imode = 0;
1368 if (!strcmp(mode, "PROOF")) imode = 1;
1369 if (!strcmp(mode, "GRID")) imode = 2;
1370 TChain *chain = NULL;
1371 // Local chain
1372 switch (imode) {
1373 case 0:
1374 if (iAODanalysis) {
1375 if (!kLocalXMLDataset.Length()) {
1376 // Local AOD
1377 chain = new TChain("aodTree");
1378 TString line;
1379 ifstream in;
1380 in.open(kLocalDataList.Data());
1381 while (in.good()) {
1382 in >> line;
1383 if (line.Length() == 0) continue;
1384 // cout << " line = " << line << endl;
1385 chain->Add(line.Data());
1386 }
1387 } else {
1388 // Interactive AOD
1389 chain = CreateChainSingle(kLocalXMLDataset, "aodTree");
1390 }
1391 } else {
1392 if (!kLocalXMLDataset.Length()) {
1393 // Local ESD
1394 chain = new TChain("esdTree");
1395 TString line;
1396 ifstream in;
1397 in.open(kLocalDataList.Data());
1398 while (in.good()) {
1399 in >> line;
1400 if (line.Length() == 0) continue;
1401 cout << " line = " << line << endl;
1402 chain->Add(line.Data());
1403 }
1404 } else {
1405 // Interactive ESD
1406 chain = CreateChainSingle(kLocalXMLDataset, "esdTree");
1407 }
1408 }
1409 break;
1410 case 1:
1411 break;
1412 case 2:
1413 if (kPluginUse) {
1414// AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1415// AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1416 } else {
1417 TString treeName = "esdTree";
1418 if (iAODanalysis) treeName = "aodTree";
1419 chain = CreateChainSingle("wn.xml", treeName);
1420 }
1421 break;
1422 default:
1423 }
1424 if (chain && chain->GetNtrees()) return chain;
1425 return NULL;
1426}
1427
1428//______________________________________________________________________________
1429TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
1430{
1431 printf("*******************************\n");
1432 printf("*** Getting the ESD Chain ***\n");
1433 printf("*******************************\n");
1434 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
1435
1436 if (!myCollection) {
1437 ::Error("AnalysisTrainPWG4Jets.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
1438 return NULL ;
1439 }
1440
1441 TChain* chain = new TChain(treeName);
1442 myCollection->Reset() ;
1443 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
1444 chain->ls();
1445 return chain;
1446}
1447
1448//______________________________________________________________________________
1449Int_t SetupPar(char* pararchivename)
1450{
1451 if (!pararchivename || !strlen(pararchivename)) return -1;
1452 char processline[1024];
1453 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
1454 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
1455 ::Info("AnalysisTrainPWG4Jets.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
9748e967 1456 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
1457 Form("%s.par",pararchivename));
c38e3b95 1458 } else {
1459 ::Error("AnalysisTrainPWG4Jets.C::SetupPar", "Cannot find %s.par", pararchivename);
1460 return -1;
1461 }
1462 }
1463 if (kPluginUse && kSaveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, kTrainName.Data()));
1464 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
1465
1466 TString ocwd = gSystem->WorkingDirectory();
1467 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
1468
1469 // check for BUILD.sh and execute
1470 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
1471 printf("*******************************\n");
1472 printf("*** Building PAR archive ***\n");
1473 printf("*******************************\n");
1474 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
1475 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
1476 return -1;
1477 }
1478 }
1479
1480 // check for SETUP.C and execute
1481 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
1482 printf("*******************************\n");
1483 printf("*** Setup PAR archive ***\n");
1484 printf("*******************************\n");
1485 gROOT->Macro("PROOF-INF/SETUP.C");
1486 }
1487 if (!gSystem->ChangeDirectory(ocwd.Data())) return -1;
1488 return 0;
1489}
1490
1491//______________________________________________________________________________
1492AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
1493{
1494// Check if user has a valid token, otherwise make one. This has limitations.
1495// One can always follow the standard procedure of calling alien-token-init then
1496// source /tmp/gclient_env_$UID in the current shell.
c8fb37dd 1497// if (!AliAnalysisGrid::CreateToken()) return NULL;
c38e3b95 1498 AliAnalysisAlien *plugin = new AliAnalysisAlien();
1499// Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
1500 plugin->SetRunMode(plugin_mode);
1501 if (kPluginUseProductionMode) plugin->SetProductionMode();
1502 plugin->SetJobTag(kJobTag);
e0c120d9 1503 plugin->SetNtestFiles(1);
c38e3b95 1504// plugin->SetPreferedSE("ALICE::NIHAM::File");
1505// Set versions of used packages
e84da0a5 1506 plugin->SetAPIVersion("V1.1x");
1507 // plugin->SetAPIVersion("V1.0x");
1508// plugin->SetAPIVersion("V2.4");
c38e3b95 1509 plugin->SetROOTVersion(kPluginRootVersion);
1510 plugin->SetAliROOTVersion(kPluginAliRootVersion);
1511// Declare input data to be processed.
1512// Method 1: Create automatically XML collections using alien 'find' command.
1513// Define production directory LFN
1514 plugin->SetGridDataDir(kGridDatadir.Data());
1515// Set data search pattern
1516 if (iAODanalysis) plugin->SetDataPattern(" *AliAOD.root");
c8fb37dd 1517 // else plugin->SetDataPattern(Form(" %s/*/*ESD.tag.root",kGridPassPattern.Data()));
1518 else plugin->SetDataPattern(Form(" %s/*/*AliESDs.root",kGridPassPattern.Data()));
c38e3b95 1519// ...then add run numbers to be considered
1520// plugin->SetRunRange(kGridRunRange[0], kGridRunRange[1]);
1521 for (Int_t i=kGridRunRange[0]; i<=kGridRunRange[1]; i++) {
1522 Printf("AnalysisTrainPWG4Jets Adding run number %s", Form(kGridRunPattern.Data(),i));
1523 plugin->AddRunNumber(Form(kGridRunPattern.Data(),i));
1524 }
1525
1526 if(kGridLocalRunList.Length()>0){
1527 ifstream in1;
1528 in1.open(kGridLocalRunList.Data());
1529 int iRun;
4d16db9c 1530 int icount = 0;
9a5c5b1e 1531 /*
e84da0a5 1532 char c;
1533 char cLine[250];
1534 while(!in1.eof()){
1535 c = in1.get();
1536 if ( (c >= '0') && (c <= '9') )
1537 {
1538 in1.putback (c);
1539 in1>>iRun;
1540 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1541 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1542 }
1543 else
1544 {
1545 in1.putback (c);
1546 in1.getline(cLine,250);
9a5c5b1e 1547
1548 }
1549 }
1550 */
9748e967 1551
1552 Int_t nRun = 0;
9a5c5b1e 1553
1554 // just use run numbers, negatives will be excluded
1555 while(in1>>iRun){
4d16db9c 1556 if(iRun>= kGridOffsetRunFromList&&(nRun<kGridMaxRunsFromList)){
9a5c5b1e 1557 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1558 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
9748e967 1559 nRun++;
9a5c5b1e 1560 }
1561 else{
1562 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d", iRun);
e84da0a5 1563 }
c38e3b95 1564 }
1565 }
1566
1567// Method 2: Declare existing data files (raw collections, xml collections, root file)
1568// If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
1569// XML collections added via this method can be combined with the first method if
1570// the content is compatible (using or not tags)
1571// plugin->AddDataFile("tag.xml");
1572// plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
1573// Define alien work directory where all files will be copied. Relative to alien $HOME.
3878a941 1574 TString alien_workdir = "";
1575
1576 if (iAODanalysis) alien_workdir += "analysisAOD";
1577 else alien_workdir += "analysisESD";
1578 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1579 plugin->SetGridWorkingDir(alien_workdir.Data());
1580
c38e3b95 1581 // Declare alien output directory. Relative to working directory.
1582 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1583 plugin->SetGridOutputDir(kGridOutdir);
1584
1585 // Add external packages
1586 if (iJETAN||iDIJETAN) {
23adcac8 1587 plugin->AddExternalPackage("boost::v1_43_0");
1588 plugin->AddExternalPackage("cgal::v3.6");
1589 plugin->AddExternalPackage("fastjet::v2.4.2");
c38e3b95 1590 }
1591
1592
1593 // set extra libs before par file compilation
1594 anaLibs += kGridExtraFiles;
1595 anaLibs = anaLibs.Strip();
e84da0a5 1596 Printf("anaLibs %s",anaLibs.Data());
1597 Printf("anaLibsExtra %s",anaLibsExtra.Data());
1598
1599 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs.Data());
1600 if (anaLibsExtra.Length()) plugin->SetAdditionalRootLibs(anaLibsExtra.Data());
c38e3b95 1601
1602 TString ana_sources = "";
1603 TString ana_add = "";
1604 if (kUsePAR && anaPars.Length()) {
1605 printf("%s\n", anaPars.Data());
1606 TObjArray *arr;
1607 TObjString *objstr;
1608 arr = anaPars.Tokenize(" ");
1609 TIter next(arr);
1610 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
1611 delete arr;
1612 }
1613
1614// Declare the analysis source files names separated by blancs. To be compiled runtime
1615// using ACLiC on the worker nodes.
1616 ana_sources = anaSources.Strip();
1617// Declare all libraries (other than the default ones for the framework. These will be
1618// loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
1619
1620 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
1621 plugin->SetExecutableCommand(kPluginExecutableCommand.Data());
4721d8c5 1622 // Declare the output file names separated by blancs.
1623 // (can be like: file.root or file.root@ALICE::Niham::File)
c38e3b95 1624 plugin->SetMergeExcludes(kGridMergeExclude);
1625 plugin->SetMaxMergeFiles(kGridMaxMergeFiles);
1626 plugin->SetNrunsPerMaster(kGridRunsPerMaster);
9a5c5b1e 1627 plugin->SetMergeViaJDL(kPluginMergeViaJDL);
4721d8c5 1628 // Use fastread option
9a5c5b1e 1629 plugin->SetFastReadOption(kPluginFastReadOption);
4721d8c5 1630 // UseOverwrite mode
9a5c5b1e 1631 plugin->SetOverwriteMode(kPluginOverwriteMode);
4721d8c5 1632 // Optionally define the files to be archived.
1633 // plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
dc6a7461 1634 plugin->SetOutputToRunNo(kPluginOutputToRunNumber); // write the output to subdirs named after run number
c38e3b95 1635
1636 // Put default output files to archive
1637 TString listhists = "";
1638 TString listaods = "";
1639 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1640 TIter next(mgr->GetOutputs());
1641 AliAnalysisDataContainer *output;
1642 while ((output=(AliAnalysisDataContainer*)next())) {
1643 const char *filename = output->GetFileName();
1644 if (!(strcmp(filename, "default"))) {
53c63663 1645 if (!mgr->GetOutputEventHandler()) continue;
c38e3b95 1646 filename = mgr->GetOutputEventHandler()->GetOutputFileName();
e84da0a5 1647 if (listaods.Length()) listaods += " ";
c38e3b95 1648 listaods += filename;
c38e3b95 1649 } else {
e84da0a5 1650 if(!listhists.Contains(filename)){
1651 if (listhists.Length()) listhists += " ";
c38e3b95 1652 listhists += filename;
1653 }
1654 }
1655 }
53c63663 1656
53c63663 1657 if (mgr->GetExtraFiles().Length()) {
e84da0a5 1658 if (listaods.Length()) listaods += " ";
53c63663 1659 listaods += mgr->GetExtraFiles();
c38e3b95 1660 }
53c63663 1661
1662 // if we do not fill the aod we do not need to store it
4721d8c5 1663 // kGridMergeExclude = listaods;
e84da0a5 1664
4721d8c5 1665 if(kSaveAOD!=0){
1666 TString outputFiles = "";
1667 outputFiles += mgr->GetExtraFiles();
1668 if (listhists.Length()) outputFiles += " ";
1669 outputFiles += listhists;
e84da0a5 1670 plugin->SetDefaultOutputs(kFALSE);
4721d8c5 1671 Printf("%s:%d Starting with the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
1672 // remove
1673 // no harm done when we try to remove something that is not there :)
1674 if(!(kSaveAOD&(1<<0))){
1675 outputFiles.ReplaceAll("AliAOD.root ","");
1676 listaods.ReplaceAll("AliAOD.root ","");
1677 }
1678 if(!(kSaveAOD&(1<<1))){
1679 if(kDeltaAODJetName.Length())outputFiles.ReplaceAll(kDeltaAODJetName.Data(),"");
1680 if(kDeltaAODJetName.Length())listaods.ReplaceAll(kDeltaAODJetName.Data(),"");
1681
1682 }
1683 if(!(kSaveAOD&(1<<2))){
1684 if(kDeltaAODPartCorrName.Length())outputFiles.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
1685 if(kDeltaAODPartCorrName.Length())listaods.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
1686 }
1687 if(!(kSaveAOD&(1<<3))){
1688 if(kDeltaAODJCORRANName.Length())outputFiles.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
1689 if(kDeltaAODJCORRANName.Length())listaods.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
1690 }
1691
1692 //
1693 Printf("%s:%d Saving the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
1694 plugin->SetOutputFiles(outputFiles.Data());
e84da0a5 1695 }
53c63663 1696
4721d8c5 1697 TString outputArchive;
4d5d766e 1698 outputArchive = Form("log_archive.zip:std*@%s","disk=1");
e84da0a5 1699 listaods.ReplaceAll(" ", ",");
1700 listhists.ReplaceAll(" ", ",");
4d5d766e 1701 if (listhists.Length()){
1702 outputArchive += " ";
1703 outputArchive += "root_archive.zip:";
1704 outputArchive += listhists;
1705 if (listaods.Length()){
1706 outputArchive += ",";
1707 outputArchive += listaods;
1708 }
1709 outputArchive += Form("@%s", kGridOutputStorages.Data());
1710 }
1711 else{
1712
1713 if (listaods.Length()){
1714 // we have only aod'ish output
1715 outputArchive += " ";
1716 outputArchive += "root_archive.zip:";
1717 outputArchive += listaods;
1718 outputArchive += Form("@%s", kGridOutputStorages.Data());
1719 }
1720 else{
1721 // no other outputs than std..
c38e3b95 1722 ::Fatal("AnalysisTrainPWG4Jets", "No task output !");
4d5d766e 1723 }
c38e3b95 1724 }
4d5d766e 1725
17d96675 1726 plugin->SetDefaultOutputs(kFALSE);
c38e3b95 1727 plugin->SetOutputArchive(outputArchive);
17d96675 1728
4721d8c5 1729
4d5d766e 1730 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
c38e3b95 1731 plugin->SetAnalysisMacro(Form("%s.C", kTrainName.Data()));
4d5d766e 1732 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
c38e3b95 1733 plugin->SetSplitMaxInputFileNumber(kGridFilesPerJob);
4d5d766e 1734 // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
27cdf9c4 1735 // plugin->SetMaxInitFailed(5);
4d5d766e 1736 // Optionally resubmit threshold.
c8fb37dd 1737 // plugin->SetMasterResubmitThreshold(90);
4d5d766e 1738 // Optionally set time to live (default 30000 sec)
17d96675 1739 plugin->SetTTL(50400); // 14h...
4d5d766e 1740 // Optionally set input format (default xml-single)
c38e3b95 1741 plugin->SetInputFormat("xml-single");
4d5d766e 1742 // Optionally modify the name of the generated JDL (default analysis.jdl)
c38e3b95 1743 plugin->SetJDLName(Form("%s.jdl", kTrainName.Data()));
4d5d766e 1744 // Optionally modify the executable name (default analysis.sh)
c38e3b95 1745 plugin->SetExecutable(Form("%s.sh", kTrainName.Data()));
4d5d766e 1746 // Optionally modify job price (default 1)
c38e3b95 1747 plugin->SetPrice(1);
4d5d766e 1748 // Optionally modify split mode (default 'se')
c38e3b95 1749 plugin->SetSplitMode("se");
1750 return plugin;
1751}
1752
1753//______________________________________________________________________________
1754void WriteConfig()
1755{
1756// Write train configuration in a file. The file name has the format:
1757// train_[trainName]_ddMonthyyyy_time.C
1758 if (kUseDate) {
1759 gSystem->Exec("date +%d%b%Y_%Hh%M > date.tmp");
1760 ifstream fdate("date.tmp");
1761 if (!fdate.is_open()) {
1762 ::Error("AnalysisTrainPWG4Jets.C::Export","Could not generate file name");
1763 return;
1764 }
1765 const char date[64];
1766 fdate.getline(date,64);
1767 fdate.close();
1768 gSystem->Exec("rm date.tmp");
1769 kTrainName = Form("train_%s_%s", kTrainName.Data(), date);
1770 } else {
1771 kTrainName = Form("train_%s", kTrainName.Data());
1772 }
1773 TString cdir = gSystem->WorkingDirectory();
1774 gSystem->MakeDirectory(kTrainName);
1775 gSystem->ChangeDirectory(kTrainName);
1776 ofstream out;
1777 out.open(Form("%sConfig.C",kTrainName.Data()), ios::out);
1778 if (out.bad()) {
1779 ::Error("AnalysisTrainPWG4Jets.C::Export", "Cannot open ConfigTrain.C for writing");
1780 return;
1781 }
1782 out << "{" << endl;
1783 out << " kTrainName = " << "\"" << kTrainName.Data() << "\";" << endl;
1784 out << " kProofCluster = " << "\"" << kProofCluster.Data() << "\";" << endl;
1785 out << " kProofUseAFPAR = " << kProofUseAFPAR << ";" << endl;
1786 if (kProofUseAFPAR)
1787 out << " kProofAFversion = " << kProofAFversion.Data() << ";" << endl;
1788 out << " kProofDataSet = " << "\"" << kProofDataSet.Data() << "\";" << endl;
1789 out << " kPluginUse = " << kPluginUse << ";" << endl;
1790 out << " kUsePAR = " << kUsePAR << ";" << endl;
1791 out << " kUseCPAR = " << kUseCPAR << ";" << endl;
1792 out << " kPluginRootVersion = " << "\"" << kPluginRootVersion.Data() << "\";" << endl;
1793 out << " kPluginAliRootVersion = " << "\"" << kPluginAliRootVersion.Data() << "\";" << endl;
1794 out << " kGridDatadir = " << "\"" << kGridDatadir.Data() << "\";" << endl;
1795 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1796 out << " kGridOutdir = " << "\"" << kGridOutdir.Data() << "\";" << endl;
1797 out << " kGridMaxMergeFiles = " << kGridMaxMergeFiles << ";" << endl;
1798 out << " kGridMergeExclude = " << "\"" << kGridMergeExclude.Data() << "\";" << endl;
1799 out << " kGridRunsPerMaster = " << kGridRunsPerMaster << ";" << endl;
1800 out << " kGridFilesPerJob = " << kGridFilesPerJob << ";" << endl;
1801 out << " kGridRunRange[0] = " << kGridRunRange[0] << ";" << endl;
1802 out << " kGridRunRange[1] = " << kGridRunRange[1] << ";" << endl;
1803 out << " kUseDebug = " << kUseDebug << ";" << endl;
1804 out << " kUseMC = " << kUseMC << ";" << endl;
1805 out << " kUseESDTags = " << kUseESDTags << ";" << endl;
1806 out << " kUseKinefilter = " << kUseKinefilter << ";" << endl;
1807 out << " kUseTR = " << kUseTR << ";" << endl;
1808 out << " kUseAODTags = " << kUseAODTags << ";" << endl;
1809 out << " kSaveTrain = " << "kFALSE;" << endl << endl;
1810 out << " // Analysis modules" << endl;
1811 out << " iAODanalysis = " << iAODanalysis << ";" << endl;
1812 out << " iAODhandler = " << iAODhandler << ";" << endl;
1813 out << " iESDfilter = " << iESDfilter << ";" << endl;
1814 out << " iJETAN = " << iJETAN << ";" << endl;
1815 out << "// Configuration fot the wagons" << endl;
1816 out << "}" << endl;
1817 ::Info("AnalysisTrainPWG4Jets.C::WriteConfig", "Train configuration wrote to file %s", Form("config_%s.C", kTrainName.Data()));
1818 gSystem->ChangeDirectory(cdir);
1819}
1820
1821//______________________________________________________________________________
1822Bool_t LoadConfig(const char *filename)
1823{
1824// Read train configuration from file
1825 if (gSystem->AccessPathName(filename)) {
1826 ::Error("AnalysisTrainPWG4Jets.C::LoadConfig", "Config file name not found");
1827 return kFALSE;
1828 }
1829 gROOT->ProcessLine(Form(".x %s", filename));
1830 ::Info("AnalysisTrainPWG4Jets.C::LoadConfig", "Train configuration loaded from file %s", filename);
1831 return kTRUE;
1832}
1833
1834Bool_t PatchJDL(){
1835 Printf(">>> Patching JDL");
1836 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1837 AliAnalysisAlien* gridHandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1838 TGridJDL *jdl = gridHandler->GetGridJDL();
1839 if(iJETAN)jdl->AddToPackages("fastjet","v2.4.0");
1840 gridHandler->WriteJDL(kFALSE);
0971dabc 1841 Printf("<<< Patching JDL");
c38e3b95 1842 return kTRUE;
1843}
1844
1845Bool_t PatchAnalysisMacro(){
4721d8c5 1846 Printf(">>> Patching AnalysisMacro");
1847 gSystem->Exec(Form("mv %s.C %s.C_tmp",kTrainName.Data(),kTrainName.Data()));
c38e3b95 1848
1849 ifstream in1;
1850 in1.open(Form("%s.C_tmp", kTrainName.Data()));
1851 char cLine[250];
1852 TString st;
1853 while(in1.getline(cLine,250)){
1854 st += cLine;
1855 st += "\n";
1856 }
4721d8c5 1857 Int_t index= -1;
c38e3b95 1858 index = st.Index("gSystem->Load(\"libPhysics\");");
1859 index += strlen("gSystem->Load(\"libPhysics\");");
4721d8c5 1860 /*
c38e3b95 1861 TObjArray *arr;
1862 TObjString *objstr;
1863 arr = anaLibs.Tokenize(" ");
1864 TIter next(arr);
4721d8c5 1865
c38e3b95 1866 add += "\n\n // added by CKB \n";
1867 while ((objstr=(TObjString*)next())){
e84da0a5 1868 if(objstr->GetString().Contains("PWG3"))continue;
c38e3b95 1869 if(objstr->GetString().EndsWith(".so"))add += Form("gSystem->Load(\"%s\");\n",objstr->GetString().Data());
1870 }
1871 delete arr;
4721d8c5 1872 */
3878a941 1873 // add += Form("AliLog::SetGlobalLogLevel(%d);\n",AliLog::GetGlobalLogLevel());
4721d8c5 1874 TString add = "";
1875
1876 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1877 add += "\n\n // added by CKB \n";
46534866 1878 if(kErrorIgnoreLevel>0)add += Form("gErrorIgnoreLevel = %d;\n",kErrorIgnoreLevel);
23adcac8 1879 add += "\n gSystem->AddIncludePath(\"./\"); \n";
4721d8c5 1880 if(gGrid&&kPluginAliRootVersion.Length()==0){
1881 add += "\n // Dirty hack for TRD reference data \n";
1882 add += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
1883 add += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
1884 add += "\"); \n";
c38e3b95 1885 }
4721d8c5 1886 add += "// BKC \n\n";
1887 st.Insert(index,add.Data());
e84da0a5 1888
1889 if(kUseDebug){
23adcac8 1890 // st.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
e84da0a5 1891 }
1892
4721d8c5 1893 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
1894 index = st.Index("gSystem->AddIncludePath(\"-I$"); // uncommen $ALICE_ROOT include for par files
1895 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1896 st.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
1897 }
c166d299 1898
46534866 1899 if(AliLog::GetGlobalLogLevel()==AliLog::kFatal){
1900 index = st.Index("AliLog::SetGlobal"); // ncomment setting of log level, do my own
1901 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1902 st.Insert(index,"AliLog::SetGlobalLogLevel(AliLog::kFatal);// CKB \n // CKB comment out for own setting \n //");
1903 }
1904
c38e3b95 1905 ofstream out;
1906 out.open(Form("%s.C", kTrainName.Data()));
1907 if (out.bad()) {
1908 return kFALSE;
1909 }
1910 out << st << endl;
1911 Printf("<<< Patching AnalysisMacro");
4721d8c5 1912
1913
1914
1915
1916
1917 Printf(">>> Patching Merge Macro");
1918 gSystem->Exec(Form("mv %s_merge.C %s_merge.C_tmp",kTrainName.Data(),kTrainName.Data()));
1919
1920 ifstream in2;
1921 in2.open(Form("%s_merge.C_tmp", kTrainName.Data()));
1922 TString st2;
1923 while(in2.getline(cLine,250)){
1924 st2 += cLine;
1925 st2 += "\n";
1926 }
1927 index = st2.Index("gSystem->Load(\"libPhysics\");");
1928 index += strlen("gSystem->Load(\"libPhysics\");");
1929 TString add2 = "";
23adcac8 1930 add2 += "\n gSystem->AddIncludePath(\"./\"); \n";
4721d8c5 1931 if(gGrid&&kPluginAliRootVersion.Length()==0){
1932 add2 += "\n // Dirty hack for TRD reference data \n";
1933 add2 += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
1934 add2 += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
1935 add2 += "\"); \n";
1936 }
1937 add2 += "// BKC \n\n";
1938 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1939 st2.Insert(index,add.Data());
1940
1941
1942 if(kUseDebug){
23adcac8 1943 // st2.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
4721d8c5 1944 }
1945
1946 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
46534866 1947 index = st2.Index("gSystem->AddIncludePath(\"-I$"); // uncomment $ALICE_ROOT include for par files
4721d8c5 1948 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1949 st2.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
1950 }
1951
1952 // do not exclude the extra files from merign, this is done explicitly in this train script
92d850d5 1953 // index = st2.Index("mergeExcludes +="); // uncommen $ALICE_ROOT include for par files
1954 // if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1955 // st2.Insert(index,"// CKB comment out, handled explicitly by the train macro \n //");
4721d8c5 1956
1957
1958 ofstream out2;
1959 out2.open(Form("%s_merge.C", kTrainName.Data()));
1960 if (out2.bad()) {
1961 return kFALSE;
1962 }
1963 out2 << st2 << endl;
1964 Printf("<<< Patching Merging Macro");
1965
1966
1967
c38e3b95 1968 return kTRUE;
1969
1970}