add flag for the number of leading jets excluded for random cones
[u/mrichter/AliRoot.git] / PWG4 / macros / AnalysisTrainPWG4Jets.C
CommitLineData
c38e3b95 1//===================== ANALYSIS TRAIN =========================================
2// To use: copy this macro to your work directory, modify the global part to match
3// your needs, then run root.
4// root[0] .L AnalysisTrain.C
5// Grid full mode as below (other modes: test, offline, submit, terminate)
121e4bd5 6// root[1] AnalysisTrainPWG-244Jets("grid", "full")
c38e3b95 7// CAF mode (requires root v5-23-02 + aliroot v4-16-Rev08)
8// root[2] AnalysisTrainPWG4Jets("proof")
9// Local mode requires AliESds.root or AliAOD.root in ./data directory
10// root[3] AnalysisTrainPWG4Jets("local")
11// In proof and grid modes, a token is needed and sourcing the produced environment file.
12//
13// If 'saveTrain' flag is set, the train will generate a directory name and run
14// in this directory. A configuration file 'ConfigTrain.C' will be generated.
15// One can replay at any time the train via:
16// root[1] AnalysisTrainPWG4Jets(ana_mode, plugin_mode, "train_default_<date>/ConfigTrain.C")
17
18// For Usage with fastjet run in "offline" first and then "submit"
19// jdl and analysismacro are automatically patched after "offline" mode
20
21// =============================================================================
22// ### General Steering variables
23// =============================================================================
24//== general setup variables
25TString kTrainName = "testAnalysis"; // *CHANGE ME* (no blancs or special characters)
26TString kJobTag = "PWG4 Jet Tasks analysis train configured"; // *CHANGE ME*
27
28// Usage of par files ONLY in grid mode and ONLY if the code is not available
29// in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
30// To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
31// AliRoot.
32Bool_t kUsePAR = kFALSE; // use par files for extra libs
33Bool_t kUseCPAR = kFALSE; // use par files for common libs
34Bool_t kFillAOD = kFALSE; // switch of AOD filling for on the fly analysis
a7e27517 35Bool_t kFilterAOD = kTRUE;
4721d8c5 36Int_t kSaveAOD = 8; // Bit switch 1 = Full AOD 2 = Jet AOD , 4 = PartCorr, 8 = JCORRAN
c38e3b95 37//== general input and output variables
9a5c5b1e 38
c38e3b95 39Int_t iAODanalysis = 1; // Analysis on input AOD's
40Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
f4132e7d 41Int_t iCentralitySelection = 0; // Use the centrality
c38e3b95 42Int_t iESDfilter = 0; // ESD to AOD filter (barrel + muon tracks)
e84da0a5 43Int_t iPhysicsSelection = 1; // ESD to AOD filter (barrel + muon tracks)
d8f21f85 44UInt_t iPhysicsSelectionFlag = 1; // set by pyshics selection and passed to the task, kMB, kUserDefined etc
cfd02305 45Bool_t useTender = kFALSE; // use tender wagon
c38e3b95 46Bool_t kUseKinefilter = kFALSE; // use Kinematics filter
47Bool_t kUseMuonfilter = kFALSE; // use Kinematics filter
48TString kCommonOutputFileName = "PWG4_JetTasksOutput.root";
9748e967 49TString kCaloQAOutputFileName = "PWG4_CaloQAOutput.root";
c38e3b95 50
51
52//== general process variables
53
54// ### Other flags to steer the analysis
55//==============================================================================
9a5c5b1e 56Bool_t kSkipTerminate = kTRUE; // Do not call Teminate
c38e3b95 57Bool_t kUseDate = kFALSE; // use date in train name
58Bool_t kUseDebug = kTRUE; // activate debugging
46534866 59Int_t kErrorIgnoreLevel = -1; // takes the errror print level from .rootrc
60// From TError.h:
61// const Int_t kUnset = -1;
62// const Int_t kPrint = 0;
63// const Int_t kInfo = 1000;
64// const Int_t kWarning = 2000;
65// const Int_t kError = 3000;
66// const Int_t kBreak = 4000;
67// const Int_t kSysError = 5000;
68// const Int_t kFatal = 6000;
69Int_t kUseSysInfo = 0; // activate debugging
d8f21f85 70Long64_t kNumberOfEvents = 1234567890; // number of events to process from the chain
c38e3b95 71Bool_t kUseMC = kTRUE; // use MC info
72Bool_t kIsMC = kTRUE; // is MC info, if false it overwrites Use(AOD)MC
73Bool_t kUseAODMC = kTRUE; // use MC infA
74Bool_t kUseESDTags = kFALSE; // use ESD tags for selection
75Bool_t kUseTR = kFALSE; // use track references
76Bool_t kUseAODTags = kFALSE; // use AOD tags
77Bool_t kSaveTrain = kFALSE; // save train configuration as:
f4132e7d 78Bool_t kIsPbPb = kFALSE; // Pb+Pb
c38e3b95 79
9a5c5b1e 80
c38e3b95 81// ### Analysis modules to be included. Some may not be yet fully implemented.
82//==============================================================================
83Int_t iJETAN = 1; // Jet analysis (PWG4) // 1 write standard 2 write non-standard jets, 3 wrtie both
a7e27517 84Int_t iJETSUBTRACT = 1; // Jet background subtration
d8f21f85 85TString kDefaultJetBranch = ""; // is currently set when filled (iJETAN or clusters) or from config macro
37eb26ea 86TString kDefaultJetBackgroundBranch = ""; // is currently set when filled (jet clsuters
87TString kDefaultJetBackgroundBranch_extra = ""; // is currently set when filled (jet clsuters)
a7e27517 88TString kJetSubtractBranches = ""; // is currently set when filled (jet clsuters
1a2bb6d5 89TString kJetSubtractBranches_extra = ""; // is currently set when filled (jet clsuters
a7e27517 90
d8f21f85 91TString kDefaultJetBranchMC = ""; // is currently set when filled (iJETAN or clusters) or from config macro
92TString kDefaultJetBackgroundBranchMC = ""; // is currently set when filled (jet clsuters
93TString kDefaultJetBranchMC2 = ""; // is currently set when filled (iJETAN or clusters) or from config macro
94TString kDefaultJetBackgroundBranchMC2 = ""; // is currently set when filled (jet clsuters
a31b8a87 95TString kJetSubtractMask1 = "B0";
96TString kJetSubtractMask2 = "B%d";
c38e3b95 97Int_t iDIJETAN = 1;
e6993a52 98Int_t iJETANLib = 1;
c38e3b95 99Int_t iPWG1QASym = 0; // Eva's QA task compiled on the fly...
36c36a0c 100Int_t iPWG4FastEmbedding = 0; // Generate non-standard AOD for embedding
c38e3b95 101Int_t iPWG4JetTasks = 0; // all jet tasks flag for lib laoding
102Int_t iPWG4JetServices = 0; // jet spectrum analysis
103Int_t iPWG4JetSpectrum = 0; // jet spectrum analysis
bbb42949 104Int_t iPWG4JetResponse = 0; // jet response matrix
58ef946c 105Int_t iPWG4JCORRAN = 0; // JCORRAN module
c38e3b95 106Int_t iPWG4UE = 0; // Underlying Event analysis
e0c120d9 107Int_t iPWG4LeadingUE = 0; // Underlying Event analysis
108Int_t iPWG4CorrectionsUE = 0; // Underlying Event analysis
c166d299 109Int_t iPWG4TmpSourceSara = 0; // Underlying Event analysis not in svn
aba42fcb 110Int_t iPWG4Fragmentation = 0; // Official Fragmentation
9f77f0ce 111Int_t iPWG4JetChem = 0; // Jet chemistry
c38e3b95 112Int_t iPWG4PtQAMC = 0; // Marta's QA tasks
113Int_t iPWG4PtSpectra = 0; // Marta's QA tasks
114Int_t iPWG4PtQATPC = 0; // Marta's QA tasks
4721d8c5 115Int_t iPWG4Cosmics = 0; // Marta's Cosmics Taks
c38e3b95 116Int_t iPWG4ThreeJets = 0; // Sona's thrust task
cc636095 117Int_t iPWG4QGSep = 0; // Sona's QG Separation task
118Int_t iPWG4Minijet = 0; // Eva's Mini Jet Task cluster task
b53f2e4f 119Int_t iPWG4KMeans = 0; // Andreas' KMeans task
d2e6cdd5 120Int_t iPWG4Cluster = 0; // CKB cluster task
4721d8c5 121Int_t iEMCUtilLibs = 0; // Flag to satisfy dependence on EMC utils
911a740f 122Int_t iPWG4PartCorrLibs = 0; // Gustavo's part corr analysis
c38e3b95 123Int_t iPWG4PartCorr = 0; // Gustavo's part corr analysis
d2e6cdd5 124Int_t iPWG4CaloQA = 0; // Gustavo's part corr analysis
125Int_t iPWG4JetCorr = 0; // Paul's jet corr analysis
911a740f 126Int_t iPWG4Tagged = 0; // Gustavo's part corr analysis
121e4bd5 127Int_t iPWG4omega3pi = 0; // Omega to 3 pi analysis (PWG4)
17d96675 128Int_t iPWG4GammaConvLib = 0; // Gamma Conversio
53c63663 129Int_t iPWG4GammaConv = 0; // Gamma Conversio
17d96675 130Int_t iPWG4CaloConv = 0; // Gamma Conversio
22e3ae6c 131Int_t kHighPtFilterMask = 32; // change depending on the used AOD Filter
e6993a52 132TString kDeltaAODJetName = "AliAOD.Jets.root";
4721d8c5 133TString kDeltaAODJCORRANName = "AliAOD.JCORRAN.root";
f4132e7d 134TString kDeltaAODPartCorrName = "AliAOD.PartCorr.root";
36c36a0c 135TString kFastEmbeddingAOD = "emb/AliAOD.root";
1a2bb6d5 136TString kFastEmbAODList = "";
c38e3b95 137
138//==============================================================================
139// ### PROOF Steering varibales
140//==============================================================================
141//== proof setup variables
142TString kProofCluster = "alicecaf.cern.ch";
143Bool_t kProofUseAFPAR = kFALSE; // use AF special par file
144TString kProofAFversion = "AF-v4-17";
145//== proof input and output variables
146TString kProofDataSet = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
147Bool_t kProofSaveToAlien = kFALSE; // save proof outputs in AliEn train_[trainName]_ddMonthyyyy_time.C
148TString kProofOutdir = "";
149Bool_t kProofClearPackages = kFALSE;
150Int_t kProofEvents = 10000;
151Int_t kProofOffset = 0;
152//== proof process variables
153
154
155//==============================================================================
156// ### Grid plugin Steering varibiables
157//==============================================================================
158//== grid plugin setup variables
159Bool_t kPluginUse = kTRUE; // do not change
160Bool_t kPluginUseProductionMode = kFALSE; // use the plugin in production mode
39e7e8ab 161TString kPluginRootVersion = "v5-27-06b"; // *CHANGE ME IF MORE RECENT IN GRID*
d3af0232 162TString kPluginAliRootVersion = "v4-19-15-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
9a5c5b1e 163Bool_t kPluginMergeViaJDL = kTRUE; // merge via JDL
164Bool_t kPluginFastReadOption = kFALSE; // use xrootd tweaks
165Bool_t kPluginOverwriteMode = kTRUE; // overwrite existing collections
dc6a7461 166Int_t kPluginOutputToRunNumber = 1; // write the output to subdirs named after run number
c38e3b95 167// TString kPluginExecutableCommand = "root -b -q";
168TString kPluginExecutableCommand = "source /Users/kleinb/setup_32bit_aliroot_trunk_clean_root_trunk.sh; alienroot -b -q ";
9a5c5b1e 169
c38e3b95 170// == grid plugin input and output variables
171TString kGridDatadir = "/alice/sim/PDC_08b/LHC09a1/AOD/";
9748e967 172Int_t kGridMaxRunsFromList = 999999999;
4d16db9c 173Int_t kGridOffsetRunFromList = 0; // skip the first n runs from the list
c38e3b95 174TString kGridLocalRunList = "";
175TString kGridOutdir = ""; // AliEn output directory. If blank will become output_<kTrainName>
3878a941 176TString kGridDataSet = ""; // sub working directory not to confuse different run xmls
9748e967 177Int_t kGridRunRange[2] = {0, -1}; // Set the run range
c38e3b95 178TString kGridRunPattern = "%03d"; // important for leading zeroes!!
179TString kGridPassPattern = "";
180TString kGridExtraFiles = ""; // files that will be added to the input list in the JDL...
f12de05f 181Int_t kGridMaxMergeFiles = 25; // Number of files merged in a chunk grid run range
182TString kGridMergeExclude = "AliAOD.root"; // Files that should not be merged
183TString kGridOutputStorages = "disk=2"; // Make replicas on the storages
c38e3b95 184// == grid process variables
c28abe00 185Int_t kGridRunsPerMaster = 100; // Number of runs per master job
e84da0a5 186Int_t kGridFilesPerJob = 100; // Maximum number of files per job (gives size of AOD)
c38e3b95 187
188//==============================================================================
189// ### Local Steering variables
190//==============================================================================
191//== local setup variables
192//== local input and output variables
193TString kLocalXMLDataset = ""; // Change local xml dataset for local interactive analysis
194TString kLocalDataList = "local_deltaaod.txt"; // Change local xml dataset for local interactive analysis
195// == local process variables
196
f84df50f 197TString kPluginMode = "";
198TString kAnalysisMode = "";
c38e3b95 199
200
201// Temporaries.
202TString anaPars = "";
203TString anaLibs = "";
e84da0a5 204TString anaLibsExtra = "";
c38e3b95 205TString anaSources = "";
206// Function signatures
207class AliAnalysisAlien;
208
209//______________________________________________________________________________
210void AnalysisTrainPWG4Jets(const char *analysis_mode="local",
211 const char *plugin_mode="",
4d16db9c 212 const char *config_file="",Int_t iOffset = 0,Int_t iTotal = 0)
c38e3b95 213{
214// Main analysis train macro. If a configuration file is provided, all parameters
215// are taken from there but may be altered by CheckModuleFlags.
3878a941 216
8ecf60e0 217 // these flag may be needed by the config file
f84df50f 218 kPluginMode = plugin_mode;
219 kAnalysisMode = analysis_mode;
8ecf60e0 220
221 if (strlen(config_file) && !LoadConfig(config_file)) return;
4d16db9c 222 if(iTotal>0)kGridMaxRunsFromList = iTotal; // overwrites the settings from config file
223 if(iOffset)kGridOffsetRunFromList = iOffset;
224 if(iOffset)kProofOffset = iOffset;
225
3878a941 226
c38e3b95 227 TString smode(analysis_mode);
228 smode.ToUpper();
229 if (kSaveTrain)WriteConfig();
8ecf60e0 230 // Check compatibility of selected modules
c38e3b95 231 CheckModuleFlags(smode);
ebad39a9 232 // gROOT->ProcessLine(".trace");
c38e3b95 233
234 printf("==================================================================\n");
235 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", kTrainName.Data(),smode.Data());
236 printf("==================================================================\n");
9748e967 237 printf("= Configuring analysis train for: =\n");
c38e3b95 238 if (iAODanalysis) printf("= AOD analysis =\n");
9748e967 239 else printf("= ESD analysis =\n");
240 if (iPhysicsSelection) printf("= Physics selection =\n");
f4132e7d 241 if(iCentralitySelection)printf("= Centrality selection =\n");
cfd02305 242 if (useTender) printf("= Using tender =\n");
c38e3b95 243 if (iESDfilter) printf("= ESD filter =\n");
244 if (iJETAN) printf("= Jet analysis =\n");
245 printf("==================================================================\n");
9748e967 246
247 char *printMask = ":: %20s %10d\n";
248 printf(printMask,"Fill AOD",(UInt_t)kFillAOD);
249 printf(printMask,"Save AOD", (UInt_t)kSaveAOD);
250 printf(printMask,"MC truth", (UInt_t)kUseMC);
251 printf(printMask,"KINE filter", (UInt_t)kUseKinefilter);
252 printf(printMask,"track refs", (UInt_t)kUseTR);
253 printf(printMask,"tags", (UInt_t)kUseESDTags);
254 printf(printMask,"AOD tags", (UInt_t)kUseAODTags);
255 printf(printMask,"debugging", (UInt_t)kUseDebug);
256 printf(printMask,"PAR files", (UInt_t)kUsePAR);
257 printf(printMask,"AliEn plugin", (UInt_t)kPluginUse);
a7e27517 258 printf(printMask,"JETAN subtract", (UInt_t)iJETSUBTRACT);
9748e967 259 printf(printMask,"PWG1 QA sym", iPWG1QASym);
260 printf(printMask,"PWG4 Source Sara",iPWG4TmpSourceSara);
aba42fcb 261 printf(printMask,"PWG4 Fragmentation",iPWG4Fragmentation);
9748e967 262 printf(printMask,"PWG4 Jet Chem",iPWG4JetChem);
263 printf(printMask,"PWG4 Jet tasks",iPWG4JetTasks);
264 printf(printMask,"PWG4 Jet Services",iPWG4JetServices);
265 printf(printMask,"PWG4 Jet Spectrum",iPWG4JetSpectrum);
266 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
267 printf(printMask,"PWG4 UE",iPWG4UE);
e0c120d9 268 printf(printMask,"PWG4 Leading UE",iPWG4LeadingUE);
9748e967 269 printf(printMask,"PWG4 Corrections UE",iPWG4CorrectionsUE);
270 printf(printMask,"PWG4 Pt QA MC",iPWG4PtQAMC);
271 printf(printMask,"PWG4 Pt Spectra",iPWG4PtSpectra);
272 printf(printMask,"PWG4 Pt QA TPC",iPWG4PtQATPC);
273 printf(printMask,"PWG4 Cosmics",iPWG4Cosmics);
274 printf(printMask,"PWG4 Three Jets",iPWG4ThreeJets);
cc636095 275 printf(printMask,"PWG4 QGSep",iPWG4QGSep);
276 printf(printMask,"PWG4 Minijet",iPWG4Minijet);
9748e967 277 printf(printMask,"PWG4 KMeans",iPWG4KMeans);
278 printf(printMask,"PWG4 Cluster",iPWG4Cluster);
279 printf(printMask,"PWG4 Part Corr",iPWG4PartCorr);
280 printf(printMask,"PWG4 Calo QA",iPWG4CaloQA);
281 printf(printMask,"PWG4 Jet Corr",iPWG4JetCorr);
282 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
283 printf(printMask,"PWG4 Tagged",iPWG4Tagged);
284 printf(printMask,"PWG4 omega to 3 pi ",iPWG4omega3pi);
285 printf(printMask,"PWG4 Gamma Conv",iPWG4GammaConv);
17d96675 286 printf(printMask,"PWG4 Calo Conv",iPWG4CaloConv);
9748e967 287 printf(printMask,"HighPt FilterMask",kHighPtFilterMask);
3878a941 288
c38e3b95 289 //==========================================================================
290 // Connect to back-end system
291 if (!Connect(smode)) {
292 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
293 return;
294 }
295
296 // Load common libraries and set include path
297 if (!LoadCommonLibraries(smode)) {
298 ::Error("AnalysisTrain", "Could not load common libraries");
299 return;
300 }
3878a941 301
302
c38e3b95 303
304 // Make the analysis manager and connect event handlers
e84da0a5 305 AliAnalysisManager *mgr = new AliAnalysisManager("PWG4Train", "pwg4 mini train");
c38e3b95 306 if (kCommonOutputFileName.Length()>0)mgr->SetCommonFileName(kCommonOutputFileName.Data());
307 if (kProofSaveToAlien) mgr->SetSpecialOutputLocation(kProofOutdir);
4a6f59cb 308 mgr->SetNSysInfo(0);
c38e3b95 309 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
53c63663 310 if (kUseSysInfo)mgr->SetNSysInfo(kUseSysInfo);
9a5c5b1e 311 mgr->SetSkipTerminate(kSkipTerminate);
4a6f59cb 312
c38e3b95 313 // Load analysis specific libraries
314 if (!LoadAnalysisLibraries(smode)) {
315 ::Error("AnalysisTrain", "Could not load analysis libraries");
316 return;
317 }
318
319 // Create input handler (input container created automatically)
320 if (iAODanalysis) {
321 // AOD input handler
322 AliAODInputHandler *aodH = new AliAODInputHandler();
323 mgr->SetInputEventHandler(aodH);
ffab794c 324 // if (iPWG4JetTasks) aodH->AddFriend(Form("deltas/%s",kDeltaAODJetName.Data()));
325 // if (iPWG4PartCorr) aodH->AddFriend(Form("deltas/%s"kDeltaAODJetName.Data()));
c38e3b95 326 } else {
327 // ESD input handler
328 AliESDInputHandler *esdHandler = new AliESDInputHandler();
329 if (kUseESDTags) esdHandler->SetReadTags();
c166d299 330 esdHandler->SetReadFriends(kFALSE);
c38e3b95 331 mgr->SetInputEventHandler(esdHandler);
4a6f59cb 332 // if(iPWG4PtQATPC&& !kTrainName.Contains("pass5"))esdHandler->SetActiveBranches("ESDfriend");
c166d299 333
c38e3b95 334 }
f4d11ac8 335
c38e3b95 336 // Monte Carlo handler
337 if (kUseMC && !iAODanalysis) {
338 AliMCEventHandler* mcHandler = new AliMCEventHandler();
339 mgr->SetMCtruthEventHandler(mcHandler);
340 mcHandler->SetReadTR(kUseTR);
341 }
342 // AOD output container, created automatically when setting an AOD handler
343 if (iAODhandler) {
344 // AOD output handler
345 AliAODHandler* aodHandler = new AliAODHandler();
346 aodHandler->SetOutputFileName("AliAOD.root");
6408fe42 347 aodHandler->SetFillAODforRun(kFillAOD);
121e4bd5 348 //
f4132e7d 349 mgr->SetOutputEventHandler(aodHandler);
c38e3b95 350 AliAnalysisDataContainer * cout_aod = mgr->GetCommonOutputContainer();
351 cout_aod->SetSpecialOutput();
352 }
353 // Debugging if needed
b03b08a3 354
3878a941 355 if (kUseDebug){
356 mgr->SetDebugLevel(3);
357 }
4721d8c5 358 if(kUseSysInfo>0){
359 mgr->RegisterExtraFile("syswatch.root");
360 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
361 kGridMergeExclude += "syswatch.root";
362 }
b03b08a3 363 else{
364 AliLog::SetGlobalLogLevel(AliLog::kError);
365 }
46534866 366
367
c38e3b95 368 //==========================================================================
369 // Create the chain. In this example it is created only from ALIEN files but
370 // can be done to work in batch or grid mode as well.
371 TChain *chain = CreateChain(smode, plugin_mode);
372
373 //==========================================================================
374 // Load the tasks configuration macros for all wagons. These files are supposed now to be
375 // in the current workdir, but in AliEn they will be in the file catalog,
376 // mapped from AliRoot and pecified in the jdl input list.
377
378 // For now connection to top input container and common AOD output container
379 // is done in this macro, but in future these containers will be connected
380 // from each task configuration macro.
cfd02305 381
382 //
383 // Tender and supplies. Needs to be called for every event.
384 //
f12de05f 385
cfd02305 386 if (useTender) {
34fc6450 387 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/TenderSupplies/AddTaskTender.C");
cfd02305 388 AliAnalysisTaskSE *tender = AddTaskTender(kTRUE);
389 // tender->SelectCollisionCandidates();
390 tender->SetDebugLevel(2);
391 }
392
34fc6450 393
394 Float_t fTrackEtaWindow = 0.9;
395 Float_t fJetEtaWindow = 0.5;
cfd02305 396
34fc6450 397 if(kIsPbPb){// for pass1
398 Float_t fTrackEtaWindow = 0.8;
399 Float_t fJetEtaWindow = 0.4;
400 }
cfd02305 401
e84da0a5 402 if(iPhysicsSelection && !iAODanalysis){
34fc6450 403 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
39e7e8ab 404 Int_t iTriggerHIC = 0;
405 Bool_t rejectBkg = true;
f4132e7d 406 if(kIsPbPb){
39e7e8ab 407 iTriggerHIC = 2;
408 rejectBkg = false; // for the moment...
409 }
410 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kIsMC,rejectBkg);
411 iPhysicsSelectionFlag = AliVEvent::kMB;
f12de05f 412 mgr->RegisterExtraFile("EventStat_temp.root");
413 mgr->AddStatisticsTask();
e84da0a5 414 }
415
f4132e7d 416 if(iCentralitySelection){
417
418 // has to run before AOD filter
34fc6450 419 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskCentrality.C");
d8f21f85 420 // const char* file1="$ALICE_ROOT/ANALYSIS/macros/AliCentralityBy1D_137161.root";
421 // const char* file2="$ALICE_ROOT/ANALYSIS/macros/AliCentralityByFunction_137161.root";
422 AliCentralitySelectionTask *taskC = AddTaskCentrality();
f4132e7d 423 if (!taskC) ::Warning("AnalysisTrainPWG4Jets", "AliCentralitySelectionTask cannot run for this train conditions - EXCLUDED");
424 }
425
c38e3b95 426 if (iESDfilter && !iAODanalysis) {
427 // ESD filter task configuration.
34fc6450 428 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskESDFilterPWG4Train.C");
c38e3b95 429 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilter(kUseKinefilter,kUseMuonfilter);
a7e27517 430 taskesdfilter->SetEnableFillAOD(!kFilterAOD);
f4132e7d 431
4721d8c5 432 if(kIsMC){
433 mgr->RegisterExtraFile("pyxsec_hists.root");
434 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
435 kGridMergeExclude += "pyxsec_hists.root";
436
437 }
c38e3b95 438 }
439
440 // AOD tags
441 if (kUseAODTags) {
442 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
443 mgr->AddTask(tagTask);
444 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
445 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
446 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
447 mgr->ConnectOutput(tagTask, 1, coutTags);
448 }
bbb42949 449
36c36a0c 450 if (iPWG4FastEmbedding) {
34fc6450 451 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFastEmbedding.C");
1a2bb6d5 452 AliAnalysisTaskFastEmbedding *taskEmbedding = 0;
453 if(kFastEmbAODList.Length()) taskEmbedding = AddTaskFastEmbedding(kFastEmbAODList, 1);
454 else taskEmbedding = AddTaskFastEmbedding(kFastEmbeddingAOD, 0);
a11972e9 455 taskEmbedding->SetJetBranch("jetsAOD_UA104_B0_Filter00256_Cut01000");
456 // taskEmbedding->SetEvtSelecMode(AliAnalysisTaskFastEmbedding::kEventsAll);
457 // taskEmbedding->SetDebugLevel(10);
36c36a0c 458 }
459
c38e3b95 460 // Jet analysis
461 if (iJETAN) {
34fc6450 462 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJets.C");
c38e3b95 463 AliAnalysisTaskJets *taskjets = 0;
070f06d2 464 if(iJETAN&1){
465 /*
466 taskjets = AddTaskJets(kHighPtFilterMask);
467 taskjets->SetName("StandardJets");
468 taskjets->SetNonStdBranch("");
469 */
470 }
b53f2e4f 471 if(iJETAN&2){
070f06d2 472 // Set only few jet finders backgroudn subtraction w an wo
473
d8f21f85 474 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
20b170eb 475 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
d8f21f85 476
477 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
f12de05f 478 if(kIsPbPb){
479 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
480 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
481 }
d8f21f85 482
4478beda 483 TString cTmp("");
d8f21f85 484
485 // SICONE
486 taskjets = AddTaskJets("AOD","SISCONE",0.4,kHighPtFilterMask,0.15,0); //no background subtraction to be done later....
487 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
4478beda 488 cTmp = taskjets->GetNonStdBranch();
489 if(cTmp.Length()>0)kJetSubtractBranches += Form("%s ",cTmp.Data());
f12de05f 490
d8f21f85 491 if(kUseAODMC){
492 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
f12de05f 493 if(kIsPbPb){
494 taskjets = AddTaskJets("AODMC","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
495 taskjets = AddTaskJets("AODMC2","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
496 }
497 else{
498 taskjets = AddTaskJets("AODMC","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
499 taskjets = AddTaskJets("AODMC2","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
500 }
17d96675 501 }
d8f21f85 502 if(kDeltaAODJetName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJetName.Data());
b53f2e4f 503 }
c38e3b95 504 if (!taskjets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
505 }
506
d8f21f85 507
36c36a0c 508 if (iPWG4FastEmbedding && iJETAN) {
1a2bb6d5 509 AliAnalysisTaskJets *taskEmbJets = AddTaskJets("AODextra", "FASTJET", 0.4, kHighPtFilterMask);
36c36a0c 510 taskEmbJets->ReadAODFromOutput();
1a2bb6d5 511 kJetSubtractBranches_extra += Form("%s ", taskEmbJets->GetNonStdBranch());
512
513 taskEmbJets = AddTaskJets("AODextraonly", "FASTJET", 0.4, kHighPtFilterMask);
514 taskEmbJets->ReadAODFromOutput();
515
516 taskEmbJets = AddTaskJets("AODextra", "UA1", 0.4, kHighPtFilterMask,1.,0);
517 taskEmbJets->ReadAODFromOutput();
518 taskEmbJets = AddTaskJets("AODextraonly", "UA1", 0.4, kHighPtFilterMask,1.,0);
519 taskEmbJets->ReadAODFromOutput();
520 taskEmbJets = AddTaskJets("AODextra", "UA1", 0.4, kHighPtFilterMask,1.,2);
36c36a0c 521 taskEmbJets->ReadAODFromOutput();
522 }
523
bd80a748 524 if(iPWG4Cluster){
5c76b9ca 525 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCluster.C");
bd80a748 526 AliAnalysisTaskJetCluster *taskCl = 0;
ffab794c 527 Float_t fCenUp = 0;
528 Float_t fCenLo = 0;
1c79997e 529 if(kIsPbPb&&!kIsMC){
ffab794c 530 fCenLo = 0;
531 fCenUp = 80;
532 }
bd80a748 533 if(iPWG4Cluster&1){
f12de05f 534
f4132e7d 535 if(kIsPbPb){
34fc6450 536 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
070f06d2 537 taskCl->SetBackgroundCalc(kTRUE);
538 taskCl->SetCentralityCut(fCenLo,fCenUp);
3095177c 539 taskCl->SetGhostEtamax(fTrackEtaWindow);
d8f21f85 540 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
541
a1d44e31 542 if (iPWG4FastEmbedding) {
1a2bb6d5 543 AliAnalysisTaskJetCluster *taskClEmb = 0;
34fc6450 544 taskClEmb = AddTaskJetCluster("AODextra","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
1a2bb6d5 545 taskClEmb->SetBackgroundCalc(kTRUE);
a1d44e31 546 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
34fc6450 547 taskClEmb->SetGhostEtamax(fTrackEtaWindow);
1a2bb6d5 548 kDefaultJetBackgroundBranch_extra = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskClEmb->GetJetOutputBranch());
a1d44e31 549
34fc6450 550 taskClEmb = AddTaskJetCluster("AODextraonly","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
a1d44e31 551 taskClEmb->SetBackgroundCalc(kFALSE);
552 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
34fc6450 553 taskClEmb->SetGhostEtamax(fTrackEtaWindow);
1a2bb6d5 554
34fc6450 555 taskClEmb = AddTaskJetCluster("AODextra","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow);
1a2bb6d5 556 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
557 taskClEmb->SetBackgroundBranch(kDefaultJetBackgroundBranch_extra.Data());
558 kJetSubtractBranches_extra += Form("%s ",taskClEmb->GetJetOutputBranch());
559
34fc6450 560 taskClEmb = AddTaskJetCluster("AODextraonly","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow);
1a2bb6d5 561 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
a1d44e31 562 }
563
d8f21f85 564 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.2,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
f4132e7d 565 taskCl->SetBackgroundCalc(kTRUE);
ffab794c 566 taskCl->SetCentralityCut(fCenLo,fCenUp);
34fc6450 567 taskCl->SetGhostEtamax(fTrackEtaWindow);
f4132e7d 568 }
569 else{
f12de05f 570 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1,kDeltaAODJetName.Data(),0.15); // this one is for the background jets
f4132e7d 571 taskCl->SetBackgroundCalc(kTRUE);
d8f21f85 572 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
34fc6450 573 taskCl->SetGhostEtamax(fTrackEtaWindow);
f12de05f 574
575 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1,kDeltaAODJetName.Data(),0.15);
576 taskCl->SetBackgroundCalc(kTRUE);
34fc6450 577 taskCl->SetGhostEtamax(fTrackEtaWindow);
d8f21f85 578 }
4478beda 579
37eb26ea 580 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,2,1,kDeltaAODJetName.Data(),0.15);
ffab794c 581 taskCl->SetCentralityCut(fCenLo,fCenUp);
f12de05f 582 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
a31b8a87 583 taskCl->SetNRandomCones(10);
d8f21f85 584 kDefaultJetBranch = taskCl->GetJetOutputBranch();
a7e27517 585 kJetSubtractBranches += Form("%s ",taskCl->GetJetOutputBranch());
3095177c 586
587
588 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.2,0,1,kDeltaAODJetName.Data(),0.15);
070f06d2 589 taskCl->SetCentralityCut(fCenLo,fCenUp);
f12de05f 590 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
a7e27517 591 kJetSubtractBranches += Form("%s ",taskCl->GetJetOutputBranch());
592
3095177c 593
594
595 if(kDeltaAODJetName.Length()==0&&kFilterAOD){
46465e39 596 if(kIsPbPb)taskCl->SetJetTriggerPtCut(0.0001);
3095177c 597 else taskCl->SetJetTriggerPtCut(20.);
598 }
599
d4e8abc5 600 if(kUseAODMC){
1c79997e 601 if(kIsPbPb){
34fc6450 602 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
d8f21f85 603 taskCl->SetBackgroundCalc(kTRUE);
604 taskCl->SetGhostEtamax(0.9);
605 kDefaultJetBackgroundBranchMC = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
1c79997e 606
d8f21f85 607 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
608 taskCl->SetBackgroundCalc(kTRUE);
34fc6450 609 taskCl->SetGhostEtamax(fTrackEtaWindow);
610 kDefaultJetBackgroundBranchMC2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch(),fTrackEtaWindow);
1c79997e 611 }
612 else{
34fc6450 613 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
f12de05f 614 taskCl->SetBackgroundCalc(kTRUE);
34fc6450 615 taskCl->SetGhostEtamax(fTrackEtaWindow);
f12de05f 616 kDefaultJetBackgroundBranchMC = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
617
34fc6450 618 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
f12de05f 619 taskCl->SetBackgroundCalc(kTRUE);
34fc6450 620 taskCl->SetGhostEtamax(fTrackEtaWindow);
f12de05f 621 kDefaultJetBackgroundBranchMC2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
d8f21f85 622 // pp background calcs...
623 }
624
34fc6450 625 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow);
626 taskCl->SetGhostEtamax(fTrackEtaWindow);
f12de05f 627 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC.Data());
d8f21f85 628 kDefaultJetBranchMC = taskCl->GetJetOutputBranch();
1c79997e 629
34fc6450 630 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow);
f12de05f 631 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC2.Data());
d8f21f85 632 kDefaultJetBranchMC2 = taskCl->GetJetOutputBranch();
1c79997e 633
d4e8abc5 634 }
d8f21f85 635
636
bd80a748 637 if (!taskCl) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCluster cannot run for this train conditions - EXCLUDED");
638 }
bd80a748 639 }
640
f12de05f 641
3095177c 642 if(iJETSUBTRACT&&kJetSubtractBranches.Length()){
34fc6450 643 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetBackgroundSubtract.C");
37eb26ea 644 AliAnalysisTaskJetBackgroundSubtract *taskSubtract = 0;
645 if(kJetSubtractBranches.Length()){
a31b8a87 646
37eb26ea 647 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches,3,kJetSubtractMask1.Data(),kJetSubtractMask2.Data());
648 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
649 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
f12de05f 650
37eb26ea 651 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches,2,kJetSubtractMask1.Data(),kJetSubtractMask2.Data());
652 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data()); taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
653 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
654
655 // taskSubtract->SetDebugLevel(3);
656
657 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches,1,kJetSubtractMask1.Data(),kJetSubtractMask2.Data());
658 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data()); taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
659 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
660
661 if(kJetSubtractBranches.Contains(kDefaultJetBranch.Data())&&kIsPbPb){
662 kDefaultJetBranch.ReplaceAll(taskSubtract->GetToReplace(),Form(taskSubtract->GetReplacementMask(),taskSubtract->GetSubtractionMethod()));
663 }
664 }
665 if(kJetSubtractBranches_extra.Length()){
666 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches_extra,1,kJetSubtractMask1.Data(),kJetSubtractMask2.Data(),"extra");
667 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch_extra.Data());
668 taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
669 //taskSubtract->SetDebugLevel(3);
670 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
671 if(kJetSubtractBranches_extra.Contains(kDefaultJetBranch.Data())){
672 kDefaultJetBranch.ReplaceAll(taskSubtract->GetToReplace(),Form(taskSubtract->GetReplacementMask(),taskSubtract->GetSubtractionMethod()));
673 }
674 }
675 if (!taskSubtract) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetBackgroundSubtrac cannot run for this train conditions - EXCLUDED");
a7e27517 676 }
677
c38e3b95 678 if (iDIJETAN) {
34fc6450 679 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskDiJets.C");
c38e3b95 680 AliAnalysisTaskDiJets *taskdijets = 0;
82ebd295 681 if(iDIJETAN&1)taskdijets = AddTaskDiJets();
c38e3b95 682 if (!taskdijets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
82ebd295 683 if(iDIJETAN&2){
684 taskdijets = AddTaskDiJets("jetsAOD_CDF07");
685 taskdijets = AddTaskDiJets("jetsAOD_DA07");
686 taskdijets = AddTaskDiJets("jetsAOD_FASTJET07");
687 taskdijets = AddTaskDiJets("jetsAOD_FASTKT07");
688 taskdijets = AddTaskDiJets("jetsAOD_SISCONE07");
689 taskdijets = AddTaskDiJets("jetsAOD_UA107");
690 }
c38e3b95 691 }
692
c38e3b95 693 if(iPWG1QASym){
34fc6450 694 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskQAsym.C");
c38e3b95 695 AliAnalysisTaskQASym *taskQASym = AddTaskQAsym(-1);
696 if (!taskQASym) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQASym cannot run for this train conditions - EXCLUDED");
121e4bd5 697 }
c38e3b95 698
121e4bd5 699
700
701 if(iPWG4TmpSourceSara){
34fc6450 702 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskEta.C");
121e4bd5 703 AliAnalysisTaskEta *taskEta = AddTaskEta();
704 if (!taskEta) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskEta cannot run for this train conditions - EXCLUDED");
c38e3b95 705 }
706
c580ebbb 707
c38e3b95 708 if(iPWG4JetServices){
34fc6450 709 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetServices.C");
c38e3b95 710 AliAnalysisTaskJetServices *taskjetServ = 0;
711 taskjetServ = AddTaskJetServices();
712 if (!taskjetServ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetServices cannot run for this train conditions - EXCLUDED");
53c63663 713 if(kGridRunRange[0]>0)taskjetServ->SetRunRange(kGridRunRange[0],kGridRunRange[1]);
27cdf9c4 714 else taskjetServ->SetRunRange(110000,160000);
715 taskjetServ->SetMCData(kIsMC);
dc6a7461 716 taskjetServ->SetUsePhysicsSelection((Bool_t)iPhysicsSelection);
39e7e8ab 717 taskjetServ->SetPhysicsSelectionFlag(iPhysicsSelectionFlag); //
f4132e7d 718 taskjetServ->SetNonStdFile(kDeltaAODJetName.Data());
719 if(kIsPbPb){
bbb42949 720 if(kDeltaAODJetName.Length()>0&&kFilterAOD)taskjetServ->SetFilterAODCollisions(kTRUE);
721 // else if(iAODanalysis)taskjetServ->SetFilterAODCollisions(kTRUE);
722
d8f21f85 723 taskjetServ->SetZVertexCut(8.);
f4132e7d 724 }
ffab794c 725 if(iAODanalysis){
d8f21f85 726 // taskjetServ->SetDebugLevel(3);
ffab794c 727 taskjetServ->SetAODInput(kTRUE);
728 }
c38e3b95 729 }
730
37eb26ea 731if(iPWG4JetSpectrum){
34fc6450 732 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetSpectrum2.C");
c38e3b95 733 AliAnalysisTaskJetSpectrum2 *taskjetSpectrum = 0;
ba584432 734 TString bkgClusters = kDefaultJetBackgroundBranch.Data();
735 bkgClusters.ReplaceAll(Form("%s_",AliAODJetEventBackground::StdBranchName()),"");
736
6bd3fdae 737 if(iPWG4JetSpectrum&1){
f4132e7d 738 if(kIsPbPb){
a31b8a87 739 for(int i = 0;i<5;i++){
740 TString tmp(kDefaultJetBranch.Data());
4478beda 741 // tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),1),kJetSubtractMask1.Data());
742 // tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),1),kJetSubtractMask1.Data());
743 tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),1),Form(kJetSubtractMask1.Data(),0));
37eb26ea 744
3095177c 745 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),tmp.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
37eb26ea 746 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
747 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
748
a31b8a87 749 // taskjetSpectrum->SetDebugLevel(3);
750 // taskjetSpectrum->SetMinJetPt(10);
34fc6450 751 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
752 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
a31b8a87 753 if(iAODanalysis)SetAODInput(taskjetSpectrum);
d8f21f85 754
a31b8a87 755
756 // check the old subtracted vs. the new subtracted
757 TString tmp2(kDefaultJetBranch.Data());
4478beda 758 tmp2.ReplaceAll(Form(kJetSubtractMask2.Data(),1),Form(kJetSubtractMask2.Data(),2));
3095177c 759 taskjetSpectrum = AddTaskJetSpectrum2(tmp2.Data(),kDefaultJetBranch.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
37eb26ea 760 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
761 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
a31b8a87 762 // taskjetSpectrum->SetDebugLevel(3);
763 // taskjetSpectrum->SetMinJetPt(10);
34fc6450 764 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
765 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
a31b8a87 766 if(iAODanalysis)SetAODInput(taskjetSpectrum);
767
4478beda 768 // check the old subtracted vs. the new subtracted
769 TString tmp3(kDefaultJetBranch.Data());
770 tmp3.ReplaceAll(Form(kJetSubtractMask2.Data(),1),Form(kJetSubtractMask2.Data(),3));
a31b8a87 771
3095177c 772 taskjetSpectrum = AddTaskJetSpectrum2(tmp3.Data(),kDefaultJetBranch.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
a31b8a87 773 // taskjetSpectrum->SetDebugLevel(3);
774 // taskjetSpectrum->SetMinJetPt(10);
37eb26ea 775 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
776 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
a31b8a87 777 taskjetSpectrum->SetTrackEtaWindow(0.8);
778 taskjetSpectrum->SetJetEtaWindow(0.4);
779 if(iAODanalysis)SetAODInput(taskjetSpectrum);
d8f21f85 780
4478beda 781
3095177c 782 taskjetSpectrum = AddTaskJetSpectrum2(Form("jetsAOD_UA104_B2_Filter%05d_Cut01000",kHighPtFilterMask),kDefaultJetBranch.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
4478beda 783 // taskjetSpectrum->SetDebugLevel(3);
784 // taskjetSpectrum->SetMinJetPt(10);
34fc6450 785 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
786 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
37eb26ea 787 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
788 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
4478beda 789 if(iAODanalysis)SetAODInput(taskjetSpectrum);
d8f21f85 790
a31b8a87 791 }
f4132e7d 792 }
f12de05f 793 else{ // ! PbPb
794 Int_t i = 0;
3095177c 795
796 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),
797 "",kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
f12de05f 798
799
3095177c 800
801 if(kDefaultJetBranchMC.Length()){
802 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),
803 kDefaultJetBranchMC.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
804 // taskjetSpectrum->SetMinJetPt(10);
805 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
806 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
807 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
808 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
809 if(iAODanalysis)SetAODInput(taskjetSpectrum);
810 }
811 if(kDefaultJetBranchMC2.Length()){
812 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),
813 kDefaultJetBranchMC2.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
814 // taskjetSpectrum->SetMinJetPt(10);
815 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
816 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
817 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
818 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
819 if(iAODanalysis)SetAODInput(taskjetSpectrum);
820 }
821
ba584432 822 /*
f12de05f 823 TString tmp2(kDefaultJetBranch.Data());
824 tmp2.ReplaceAll(Form(kJetSubtractMask2.Data(),0),Form(kJetSubtractMask2.Data(),2));
3095177c 825 taskjetSpectrum = AddTaskJetSpectrum2(tmp2.Data(),kDefaultJetBranch.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
f12de05f 826 // taskjetSpectrum->SetDebugLevel(3);
827 // taskjetSpectrum->SetMinJetPt(10);
37eb26ea 828 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
829 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
ba584432 830 taskjetSpectrum->SetTrackEtaWindow(0.8);
f12de05f 831 taskjetSpectrum->SetJetEtaWindow(0.4);
832
833 // check the old subtracted vs. the new subtracted
834 TString tmp3(kDefaultJetBranch.Data());
835 tmp3.ReplaceAll(Form(kJetSubtractMask2.Data(),0),Form(kJetSubtractMask2.Data(),3));
3095177c 836 taskjetSpectrum = AddTaskJetSpectrum2(tmp3.Data(),kDefaultJetBranch.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
f12de05f 837 // taskjetSpectrum->SetDebugLevel(3);
838 // taskjetSpectrum->SetMinJetPt(10);
37eb26ea 839 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
840 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
f12de05f 841 taskjetSpectrum->SetTrackEtaWindow(0.8);
842 taskjetSpectrum->SetJetEtaWindow(0.4);
843 if(iAODanalysis)SetAODInput(taskjetSpectrum);
ba584432 844 */
f12de05f 845 }
d8f21f85 846 if (!taskjetSpectrum) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetSpectrum2 cannot run for this train conditions - EXCLUDED");
e6993a52 847 }
d8f21f85 848 }
849
850 if(iPWG4Fragmentation){
34fc6450 851 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFragmentationFunction.C");
d8f21f85 852 AliAnalysisTaskFragmentationFunction *taskFrag = 0;
853 if(kUseAODMC){
854
36c36a0c 855 }
d8f21f85 856 else{
857 taskFrag = AddTaskFragmentationFunction(kDefaultJetBranch.Data(),"","","",kHighPtFilterMask);
858 }
859 if (!taskFrag) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskFragmentationFunction cannot run for this train conditions - EXCLUDED");
860 }
861
862 if(iPWG4JetChem){
34fc6450 863 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetChem.C");
d8f21f85 864 AliAnalysisTask *taskChem = AddTaskJetChem(kHighPtFilterMask);
865 if (!taskChem) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetChem cannot run for this train conditions - EXCLUDED");
c38e3b95 866 }
6bd3fdae 867
bbb42949 868 if (iPWG4JetResponse) {
34fc6450 869 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetResponse.C");
1a2bb6d5 870 AliAnalysisTask *taskJetResponse = 0;
871
872 if(iJETAN){
873 taskJetResponse = AddTaskJetResponse("jets", "FASTJET", 0.4, kHighPtFilterMask, 0.15, 0);
874 taskJetResponse = AddTaskJetResponse("jets", "FASTJET", 0.4, kHighPtFilterMask, 0.15, 1);
875
876 taskJetResponse = AddTaskJetResponse("jets", "UA1", 0.4, kHighPtFilterMask, 1., 0);
877 taskJetResponse = AddTaskJetResponse("jets", "UA1", 0.4, kHighPtFilterMask, 1., 2);
878 }
879 if(iPWG4Cluster){
880 taskJetResponse = AddTaskJetResponse("clusters", "ANTIKT", 0.4, kHighPtFilterMask, 0.15, 0);
881 taskJetResponse = AddTaskJetResponse("clusters", "ANTIKT", 0.4, kHighPtFilterMask, 0.15, 1);
882 }
883 if (!taskJetResponse) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetResponse cannot run for this train conditions - EXCLUDED");
884
bbb42949 885 }
6bd3fdae 886
58ef946c 887 if(iPWG4JCORRAN){
34fc6450 888 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJCORRANTask.C");
4721d8c5 889 AliJCORRANTask* corran = AddTaskJCORRAN(kDeltaAODJCORRANName.Data(),0);
58ef946c 890 if(!corran)::Warning("AnalysisTrainPWG4Jets", "AliJCORRANTask cannot run for this train conditions - EXCLUDED");
4721d8c5 891 else{
892 if(kDeltaAODJCORRANName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJCORRANName.Data());
893 }
58ef946c 894 }
895
c38e3b95 896 if(iPWG4UE){
34fc6450 897 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskUE.C");
c38e3b95 898 AliAnalysisTaskUE *taskUE = 0;
899 if(iPWG4UE&1)taskUE = AddTaskUE();
900 if(iPWG4UE&2){
94ee88d4 901 taskUE =AddTaskUE("jetsAOD_CDF04","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
17d96675 902 // taskUE =AddTaskUE("jetsAOD_CDF07","CDF", "LJ", "TRANSV","MSP");
94ee88d4 903 taskUE =AddTaskUE("jetsAOD_SISCONE04","CDF", "LJ", "TRANSV","MSP");
17d96675 904 // taskUE =AddTaskUE("jetsAOD_SISCONE07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
94ee88d4 905 taskUE =AddTaskUE("jetsAOD_ICDF","CDF","LJ","TRANSV","MSP");
906 taskUE =AddTaskUE("jetsAOD_FASTKT04","CDF", "LJ", "TRANSV","MSP");
17d96675 907 // taskUE =AddTaskUE("jetsAOD_FASTKT07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
58ef946c 908 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta05", "TRANSV","MSP");
909 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta09", "TRANSV","MSP");
c38e3b95 910 }
2bb1f4ca 911
c38e3b95 912 if (!taskUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskUE cannot run for this train conditions - EXCLUDED");
913 }
e0c120d9 914
915 if(iPWG4LeadingUE){
34fc6450 916 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskLeadingTrackUE.C");
e0c120d9 917 AliAnalysisTaskLeadingTrackUE *taskLeadingUE = AddTaskLeadingTrackUE(kUseMC);
918 if (!taskLeadingUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTasLeadingTrackkUE cannot run for this train conditions - EXCLUDED");
27cdf9c4 919 // taskLeadingUE->SetFilterBit(64);
e0c120d9 920 }
921
922
9748e967 923 if(iPWG4CorrectionsUE){
34fc6450 924 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCorrectionsUE.C");
9748e967 925 AliAnalysisTaskCorrectionsUE *taskCorrectionsUE = 0;
926 if(iPWG4CorrectionsUE&1)taskCorrectionsUE = AddTaskCorrectionsUE("jetsAOD_NONE","CDF","MP_eta05","TRANSV","MSP",kFALSE);
927 if (!taskCorrectionsUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCorrectionsUE cannot run for this train conditions - EXCLUDED");
928 }
c38e3b95 929
930 if(iPWG4ThreeJets){
34fc6450 931 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskThreeJets.C");
c38e3b95 932 AliAnalysisTaskThreeJets *taskThree = AddTaskThreeJets();
933 if(!taskThree)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskThreets cannot run for this train conditions - EXCLUDED");
934 }
cc636095 935 if(iPWG4QGSep){
34fc6450 936 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskQGSep.C");
cc636095 937 AliAnalysisTaskQGSep *taskQGSep = AddTaskQGSep(kUseMC,iAODanalysis);
938 if(!taskQGSep)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQGSep cannot run for this train conditions - EXCLUDED");
939 }
940
941
942 if(iPWG4Minijet){
34fc6450 943 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskMinijet.C");
4d16db9c 944 AliAnalysisTaskMinijet *taskMini = AddTaskMinijet(-1,"esd",kUseMC,kGridDataSet);
cc636095 945 // if we ha highmult trigger add another task
946 if(!taskMini)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskMinjet cannot run for this train conditions - EXCLUDED");
947 }
948
949
c38e3b95 950 if(iPWG4PtQAMC){
34fc6450 951 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQAMC.C");
f87effcf 952 AliPWG4HighPtQAMC *taskQAMC = 0;
953 if(kUseMC){
36c36a0c 954 if(iPWG4PtQAMC&1){
955 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),0);
956 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),1);
957 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),2);
34fc6450 958 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),3);
36c36a0c 959 }
f87effcf 960 }
c38e3b95 961 if (!taskQAMC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQAMC cannot run for this train conditions - EXCLUDED");
962 }
963
964 if(iPWG4PtQATPC){
34fc6450 965 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQATPConly.C");
10295ac3 966 AliPWG4HighPtQATPConly *taskQATPC = 0;
b1cd0099 967 if(iPWG4PtQATPC&1)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),1);
968 if(iPWG4PtQATPC&2)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),2);
10295ac3 969
970 if (!taskQATPC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQATPC cannot run for this train conditions - EXCLUDED");
c38e3b95 971 }
3878a941 972
1f329128 973 if(iPWG4Cosmics){
34fc6450 974 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4CosmicCandidates.C");
1f329128 975
976 AliPWG4CosmicCandidates *taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(0);
977 taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(1);
978
979 if (!taskPWG4CosmicCandidates) ::Warning("AnalysisTrainPWG4Jets", "AddTaskPWG4CosmicCandidates cannot run for this train conditions - EXCLUDED");
980 }
981
982
c38e3b95 983 if(iPWG4PtSpectra){
34fc6450 984 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtSpectra.C");
985 AliPWG4HighPtSpectra *taskPtSpectra = AddTaskPWG4HighPtSpectra(kGridDataSet.Data(),0);
3095177c 986 taskPtSpectra = AddTaskPWG4HighPtSpectra(kGridDataSet.Data(),1);
c38e3b95 987 if (!taskPtSpectra) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskPtSpectra cannot run for this train conditions - EXCLUDED");
988 }
34fc6450 989
b53f2e4f 990 if(iPWG4KMeans){
34fc6450 991 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskKMeans.C");
b53f2e4f 992 AliAnalysisTaskKMeans *taskKMeans = AddTaskKMeans();
993 if (!taskKMeans) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskKMenans cannot run for this train conditions - EXCLUDED");
994 }
995
c38e3b95 996 if(iPWG4PartCorr){
34fc6450 997 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPartCorr.C");
14526afb 998 AliAnalysisTaskParticleCorrelation *taskpartcorrPHOS = AddTaskPartCorr("AOD", "PHOS",kFALSE,kIsMC);
c38e3b95 999 if (!taskpartcorrPHOS) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation PHOS cannot run for this train conditions - EXCLUDED");
14526afb 1000 AliAnalysisTaskParticleCorrelation *taskpartcorrEMCAL = AddTaskPartCorr("AOD", "EMCAL",kFALSE,kIsMC);
c38e3b95 1001 if (!taskpartcorrEMCAL) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation EMCAL cannot run for this train conditions - EXCLUDED");
4721d8c5 1002 if(kDeltaAODPartCorrName.Length()>0)mgr->RegisterExtraFile(kDeltaAODPartCorrName.Data());
121e4bd5 1003 }
1004
d2e6cdd5 1005 if(iPWG4CaloQA){
34fc6450 1006 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/QA/AddTaskCalorimeterQA.C");
9748e967 1007 AliAnalysisTaskParticleCorrelation *taskcaloQA = AddTaskCalorimeterQA("ESD",kFALSE,kIsMC,kCaloQAOutputFileName.Data());
d2e6cdd5 1008 if(!taskcaloQA)::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation QA cannot run - EXCLUDED");
aba42fcb 1009 // if(kCaloQAOutputFileName.Length()>0)mgr->RegisterExtraFile(kCaloQAOutputFileName.Data());
d2e6cdd5 1010 }
1011
d2e6cdd5 1012 if(iPWG4JetCorr){
1013 // using namespace JetCorrelHD;
d3af0232 1014 TString cdir = gSystem->WorkingDirectory();
34fc6450 1015 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
1016 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCorrel.C");
d2e6cdd5 1017 AliAnalysisTaskJetCorrel *taskjetcorr = AddTaskJetCorrel();
d3af0232 1018 gSystem->ChangeDirectory(cdir);
c166d299 1019 if (!taskjetcorr) ::Warning("AnalysisTrainNew", "AliAnalysisTaskJetCorrel cannot run for this train conditions - EXCLUDED");
d2e6cdd5 1020 }
1021
911a740f 1022 if(iPWG4Tagged){
34fc6450 1023 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskTaggedPhotons.C");
911a740f 1024 AliAnalysisTaskTaggedPhotons * taskTagged = AddTaskTaggedPhotons(kFALSE); // EMCAL
58ef946c 1025 taskTagged = AddTaskTaggedPhotons(kTRUE); // PHOS
911a740f 1026 if (!taskTagged) ::Warning("AnalysisTrainNew", "AliAnalysisTaskTaggedPhotons cannot run for this train conditions - EXCLUDED");
1027 }
121e4bd5 1028 if (iPWG4omega3pi) {
34fc6450 1029 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskomega3pi.C");
121e4bd5 1030 AliAnalysisTaskOmegaPi0PiPi *taskomega3pi = AddTaskomega3pi();
1031 if (!taskomega3pi) ::Warning("AnalysisTrainNew", "AliAnalysisTaskomega3pi cannot run\
1032 for these train conditions - EXCLUDED");
1033 }
1034
53c63663 1035 // PWG4 gamma conversion analysis
1036 if (iPWG4GammaConv) {
34fc6450 1037 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskGammaConversion.C");
53c63663 1038 TString cdir = gSystem->WorkingDirectory();
34fc6450 1039 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
53c63663 1040 // TString gcArguments = "-run-on-train -run-jet -run-chic -run-neutralmeson -run-cf";
58ef946c 1041 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
1042 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
b0a36f28 1043 TString gcArguments = "-run-on-train -run-jet -run-omega-meson -use-own-xyz -run-neutralmeson -no-aod";
27cdf9c4 1044 // TString kGCAnalysisCutSelectionId="9003562000100310";
cfd02305 1045 // TString kGCAnalysisCutSelectionId="9003562000100312";
1046 // gcArguments.Append(Form(" -set-cut-selection %s ",kGCAnalysisCutSelectionId.Data()));
53c63663 1047 if(!kIsMC)gcArguments += " -mc-off";
1048 AliAnalysisTaskGammaConversion * taskGammaConversion = AddTaskGammaConversion(gcArguments,mgr->GetCommonInputContainer());
1049 gSystem->ChangeDirectory(cdir);
121e4bd5 1050 taskGammaConversion->SelectCollisionCandidates();
53c63663 1051 if (!taskGammaConversion) ::Warning("AnalysisTrainNew", "AliAnalysisTaskGammaConversion cannot run for these train conditions - EXCLUDED");
1052 }
1053
17d96675 1054 if (iPWG4CaloConv) {
34fc6450 1055 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCaloConv.C");
17d96675 1056 AliAnalysisTaskCaloConv * taskCaloConv = AddTaskCaloConv();
1057 if (!taskCaloConv) ::Warning("AnalysisTrainNew", "AliAnalysisTaskCaloConv cannot run for these train conditions - EXCLUDED");
1058 }
1059
1060
3878a941 1061
c38e3b95 1062 //==========================================================================
1063 // FOR THE REST OF THE TASKS THE MACRO AddTaskXXX() is not yet implemented/
1064 // Run the analysis
1065 //
1066 if (kPluginUse) {
1067 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1068 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1069 }
1070
1071 if (mgr->InitAnalysis()) {
1072 mgr->PrintStatus();
1073 // if (kSaveTrain || strlen(config_file)) gSystem->ChangeDirectory(kTrainName);
e84da0a5 1074 if (!strcmp(plugin_mode,"submit")&&smode=="GRID"){
c38e3b95 1075 TString alien_workdir = gGrid->GetHomeDirectory();
1076 if (iAODanalysis) alien_workdir += "analysisAOD";
1077 else alien_workdir += "analysisESD";
3878a941 1078 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
c38e3b95 1079 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
e84da0a5 1080 printf("=== AnalysisTrainPWG4Jets:: Registering jdl in the work directory alien://%s/%s, should be done by the manager! ===\n",
c38e3b95 1081 alien_workdir.Data(),gridhandler->GetGridOutputDir());
58ef946c 1082
1083 TString dest;
1084 dest = Form("%s/%s/%s.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1085 if(AliAnalysisAlien::FileExists(dest.Data())){
bbb42949 1086 Printf("%s exist on grid removing...",dest.Data());
1087 gGrid->Rm(dest.Data());
58ef946c 1088 }
bbb42949 1089 Printf("%s copy ...",dest.Data());
58ef946c 1090 TFile::Cp(Form("file:%s.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
4721d8c5 1091
1092
1093 TString dest;
1094 dest = Form("%s/%s/%s_merge.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1095 if(AliAnalysisAlien::FileExists(dest.Data())){
bbb42949 1096 Printf("%s exist on grid removing...",dest.Data());
1097 gGrid->Rm(dest.Data());
4721d8c5 1098 }
bbb42949 1099 Printf("%s copy ...",dest.Data());
4721d8c5 1100 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
f84df50f 1101
bbb42949 1102 dest = Form("%s/%s/%s_merge_final.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1103 if(AliAnalysisAlien::FileExists(dest.Data())){
1104 Printf("%s exist on grid removing...",dest.Data());
1105 gGrid->Rm(dest.Data());
1106 }
1107 Printf("%s copy ...",dest.Data());
1108 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
f84df50f 1109
bbb42949 1110
1111 /*
73b7619a 1112 dest = Form("%s/rootfiles/STEER/LQ1dRef_v1.root",gGrid->GetHomeDirectory());
58ef946c 1113 if(AliAnalysisAlien::FileExists(dest.Data())){
1114 Printf("%s exist on grid removing...",dest.Data());
1115 gGrid->Rm(dest.Data());
1116 }
1117 TFile::Cp(Form("file:%s/STEER/LQ1dRef_v1.root",
9748e967 1118 gSystem->ExpandPathName("$ALICE_ROOT")),Form("alien://%s",dest.Data()));
bbb42949 1119 */
c38e3b95 1120 }
3878a941 1121 AliLog::SetGlobalLogLevel(AliLog::kError);
c166d299 1122 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
1123 TFile * fM = TFile::Open("manager_local.root","RECREATE");
1124 mgr->Write();
1125 fM->Close();
1126 }
46534866 1127
1128 // grmpf, aliroot error handler overwrites root
1129 gErrorIgnoreLevel = kErrorIgnoreLevel;
1130 if(gErrorIgnoreLevel>3000) AliLog::SetGlobalLogLevel(AliLog::kFatal);
c38e3b95 1131 StartAnalysis(smode, chain);
4a6f59cb 1132 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
1133 for(int i = 0;i < mgr->GetTopTasks()->GetEntries();i++){
1134 mgr->ProfileTask(i);
1135 }
1136 }
c38e3b95 1137 if (!strcmp(plugin_mode, "offline")&&smode=="GRID"){
e84da0a5 1138 // Offline mode path files
1139 // PatchJDL();
d8f21f85 1140 // PatchAnalysisMacro();
e84da0a5 1141 }
c38e3b95 1142
e84da0a5 1143 if (kSaveTrain && smode=="GRID") {
1144 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1145 TString alien_workdir = gGrid->GetHomeDirectory();
1146 if (iAODanalysis) alien_workdir += "analysisAOD";
3878a941 1147 else alien_workdir += "analysisESD";
1148 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
e84da0a5 1149 // kGridOutdir = gridhandler->GetGridOutputDir();
1150 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
c38e3b95 1151 alien_workdir.Data());
e84da0a5 1152 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data())))
1153 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
1154 if (strcmp(plugin_mode, "test"))
1155 TFile::Cp(Form("file:%sConfig.C",kTrainName.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
1156 }
1157 }
c38e3b95 1158}
1159
1160//______________________________________________________________________________
1161void StartAnalysis(const char *mode, TChain *chain) {
1162// Start analysis.
1163 Int_t imode = -1;
1164 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1165 if (!strcmp(mode, "LOCAL")) imode = 0;
1166 if (!strcmp(mode, "PROOF")) imode = 1;
1167 if (!strcmp(mode, "GRID")) imode = 2;
1168 switch (imode) {
1169 case 0:
1170 if (!chain) {
1171 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1172 return;
1173 }
82ebd295 1174 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
c38e3b95 1175 return;
1176 case 1:
1177 if (!kProofDataSet.Length()) {
1178 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "kProofDataSet is empty");
1179 return;
1180 }
1181 mgr->StartAnalysis(mode, kProofDataSet, kProofEvents,kProofOffset);
1182 return;
1183 case 2:
1184 if (kPluginUse) {
1185 if (!mgr->GetGridHandler()) {
1186 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Grid plugin not initialized");
1187 return;
1188 }
ebad39a9 1189 mgr->StartAnalysis("grid",chain,kNumberOfEvents);
c38e3b95 1190 } else {
1191 if (!chain) {
1192 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1193 return;
1194 }
1195 mgr->StartAnalysis(mode, chain);
ebad39a9 1196 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
c38e3b95 1197 }
1198 return;
1199 }
1200}
1201
1202//______________________________________________________________________________
1203void CheckModuleFlags(const char *mode) {
1204// Checks selected modules and insure compatibility
1205 Int_t imode = -1;
1206 if (!strcmp(mode, "LOCAL")) imode = 0;
1207 if (!strcmp(mode, "PROOF")) imode = 1;
1208 if (!strcmp(mode, "GRID")) imode = 2;
1209
1210
e84da0a5 1211 if (kUseCPAR) {
1212 kPluginAliRootVersion = ""; // NO aliroot if we use CPAR
1213 }
c38e3b95 1214
1215 if (imode==1) {
1216 if (!kUsePAR) {
1217 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
1218 kUsePAR = kTRUE;
1219 }
1220 }
1221 if (imode != 2) {
1222 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
1223 kPluginUse = kFALSE;
1224 }
1225
1226
1227 if(!kIsMC){
1228 // switch off anthin related to MC
1229 kUseMC = 0;
1230 kUseAODMC = 0;
1231 kUseTR = kFALSE;
1232 }
1233
f4132e7d 1234 // Decide if we have PbPb
1c79997e 1235 if(kGridDataSet.CompareTo("LHC10h")==0||kGridDataSet.Contains("LHC10h")) {
1236 Printf("Using settings for Pb+Pb");
f4132e7d 1237 kIsPbPb = true;
1238 }
1239
1240
1241
c38e3b95 1242 if (iAODanalysis) {
1243 // AOD analysis
1244 if (kUseMC)
1245 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
1246 if (kUseAODTags)
1247 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
1248 kUseMC = kFALSE;
1249 kUseTR = kFALSE;
1250 kUseAODTags = kFALSE;
1251 if (iESDfilter)
1252 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
1253 iESDfilter = 0;
e84da0a5 1254 if (iPhysicsSelection)
1255 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "Physics Selection disabled in analysis on AOD's");
1256 iPhysicsSelection = 0;
c38e3b95 1257 if (!iAODhandler) {
1258 if (iJETAN)
1259 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
1260 iJETAN = 0;
1261 iDIJETAN = 0;
1262 }
1263 // Disable tasks that do not work yet on AOD data
58ef946c 1264 if(iPWG4JCORRAN)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 JCORRAN disabled in analysis on AOD's");
4d62ae1a 1265 iPWG4JCORRAN = 0;
c38e3b95 1266 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
1267 iPWG4PtQAMC = 0;
1268 if( iPWG4PtQATPC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtTPC disabled in analysis on AOD's");
1269 iPWG4PtQATPC = 0;
1f329128 1270 if( iPWG4Cosmics)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Comics disabled in analysis on AOD's");
1271 iPWG4Cosmics = 0;
1272
c38e3b95 1273 if( iPWG4PtSpectra)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
1274 iPWG4PtSpectra = 0;
b53f2e4f 1275 if(iPWG4KMeans)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4KMeans disabled on AOD's");
1276 iPWG4KMeans = 0;
d2e6cdd5 1277 if (iPWG4JetCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4Jetcorr disabled on AOD's");
1278 iPWG4JetCorr = 0;
c38e3b95 1279 if (iPWG4PartCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
1280 iPWG4PartCorr = 0;
d2e6cdd5 1281 if (iPWG4CaloQA)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4CaloQA disabled on AOD's");
1282 iPWG4CaloQA = 0;
911a740f 1283 if (iPWG4Tagged)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4tagged disabled on AOD's");
1284 iPWG4Tagged = 0;
121e4bd5 1285 if (iPWG4omega3pi)
1286 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
1287 iPWG4omega3pi = 0;
c38e3b95 1288 if(iPWG1QASym)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG1 QA Sym disabled in analysis on AOD's");
53c63663 1289 if (iPWG4GammaConv)::Info("AnalysisPWG4Jets.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's");
1290 iPWG4GammaConv = 0;
c38e3b95 1291 iPWG1QASym = 0;
f4132e7d 1292 iCentralitySelection = 0;
c38e3b95 1293 } else {
1294 // ESD analysis
f4132e7d 1295
1296 if(kIsPbPb){
1297 iCentralitySelection = 1;
1298 }
1299
c38e3b95 1300 if (!kUseMC){
1301 kUseTR = kFALSE;
1302
1303 if(kUseKinefilter)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Kine Filter disabled in analysis without MC");
1304 kUseKinefilter = kFALSE;
1305 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis without MC");
1306 iPWG4PtQAMC = 0;
9748e967 1307 if( iPWG4CorrectionsUE)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 CorrectionsUE disabled in analysis without MC");
1308 iPWG4CorrectionsUE = 0;
c38e3b95 1309 }
1310 if (!kUseTR) {
c166d299 1311 if(iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "iPWG4QATPCMC disabled if not reading track references");
b03b08a3 1312 iPWG4PtQAMC = 0;
c38e3b95 1313 }
e84da0a5 1314 if (iJETAN){
1315 iESDfilter=1;
1316 }
c38e3b95 1317 if (!iESDfilter){
1318 kUseKinefilter = kFALSE;
1319 kUseMuonfilter = kFALSE;
1320 }
1321 if(!iJETAN){
cc636095 1322 iPWG4JetSpectrum = iPWG4UE = iPWG4CorrectionsUE = iPWG4ThreeJets = iPWG4QGSep = iDIJETAN = 0;
c38e3b95 1323 }
1324 }
cc636095 1325 iPWG4JetTasks = iPWG4JetServices||iPWG4JetSpectrum||iPWG4UE||iPWG4LeadingUE||iPWG4PtQAMC||iPWG4PtSpectra||iPWG4PtQATPC||iPWG4Cosmics||iPWG4ThreeJets||iPWG4QGSep||iPWG4JetChem||iPWG4Minijet||iPWG4Fragmentation;
d2e6cdd5 1326 iPWG4PartCorrLibs = iPWG4PartCorr||iPWG4Tagged||iPWG4CaloQA;
17d96675 1327 iPWG4GammaConvLib = iPWG4GammaConv||iPWG4CaloConv;
1328
1329
1330 iEMCUtilLibs = iPWG4PartCorrLibs||iPWG4JCORRAN||iPWG4GammaConvLib;
e6993a52 1331 iJETANLib = iPWG4JetTasks||iJETAN||iDIJETAN;
17d96675 1332
c38e3b95 1333 if (iESDfilter) {iAODhandler=1;}
1334 if (kUseKinefilter && !kUseMC) kUseKinefilter = kFALSE;
1335 if (kUseAODTags && !iAODhandler) kUseAODTags = kFALSE;
1336
1337
1338
1339}
1340
1341//______________________________________________________________________________
1342Bool_t Connect(const char *mode) {
1343// Connect <username> to the back-end system.
1344 Int_t imode = -1;
1345 if (!strcmp(mode, "LOCAL")) imode = 0;
1346 if (!strcmp(mode, "PROOF")) imode = 1;
1347 if (!strcmp(mode, "GRID")) imode = 2;
1348 TString username = gSystem->Getenv("alien_API_USER");
1349 switch (imode) {
1350 case 0:
1351 break;
1352 case 1:
1353 if (!username.Length()) {
1354 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1355 1. Have called: alien-token-init <username>\n \
1356 2. Have called: >source /tmp/gclient_env_$UID");
1357 return kFALSE;
1358 }
1359 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
1360 username.Data(), kProofCluster.Data());
1361 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
1362// TProof::Open(Form("%s@%s:31093", username.Data(), kProofCluster.Data()));
1363 TProof::Open(Form("%s@%s", username.Data(), kProofCluster.Data()));
1364 if (!gProof) {
1365 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
1366 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
1367 return kFALSE;
1368 }
1369 if(kProofClearPackages)gProof->ClearPackages();
1370
1371 if(kProofSaveToAlien){
1372 TGrid::Connect("alien://");
1373 if (gGrid) {
1374 TString homedir = gGrid->GetHomeDirectory();
1375 TString workdir = homedir + kTrainName;
1376 if (!gGrid->Cd(workdir)) {
1377 gGrid->Cd(homedir);
1378 if (gGrid->Mkdir(workdir)) {
1379 gGrid->Cd(kTrainName);
1380 ::Info("AnalysisTrainPWG4Jets::Connect()", "Directory %s created", gGrid->Pwd());
1381 }
1382 }
1383 gGrid->Mkdir("proof_output");
1384 gGrid->Cd("proof_output");
1385 kProofOutdir = Form("alien://%s", gGrid->Pwd());
1386 }
1387 }
1388 break;
1389 case 2:
1390 if (!username.Length()) {
1391 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1392 1. Have called: alien-token-init <username>\n \
1393 2. Have called: >source /tmp/gclient_env_$UID");
1394 return kFALSE;
1395 }
1396 if (kPluginUse && !gSystem->Getenv("alien_CLOSE_SE")) {
1397 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode),
1398 "When using the AliEn plugin it is preferable to define the \
1399 variable alien_CLOSE_SE in your environment.");
1400 return kFALSE;
1401 }
1402 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to AliEn ...",
1403 username.Data());
1404 TGrid::Connect("alien://");
1405 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
1406 break;
1407 default:
1408 ::Error("AnalysisTrainPWG4Jets.C::Connect", "Unknown run mode: %s", mode);
1409 return kFALSE;
1410 }
1411 ::Info("AnalysisTrainPWG4Jets.C::Connect","Connected in %s mode", mode);
1412 return kTRUE;
1413}
1414
1415//______________________________________________________________________________
1416Bool_t LoadCommonLibraries(const char *mode)
1417{
34fc6450 1418 if (!gSystem->Getenv("ALICE_ROOT")) {
1419 ::Error("AnalysisTrainPWG4Jets.C", "Analysis train requires that ALICE_ROOT is set to pick up Configurations");
f12de05f 1420 return kFALSE;
1421 }
1422
1423 // Load common analysis libraries.
c38e3b95 1424 Int_t imode = -1;
1425 if (!strcmp(mode, "LOCAL")) imode = 0;
1426 if (!strcmp(mode, "PROOF")) imode = 1;
1427 if (!strcmp(mode, "GRID")) imode = 2;
c38e3b95 1428 Bool_t success = kTRUE;
1429 // ROOT libraries
1430 gSystem->Load("libTree.so");
1431 gSystem->Load("libGeom.so");
1432 gSystem->Load("libVMC.so");
1433 gSystem->Load("libPhysics.so");
1434
1435 // Load framework classes. Par option ignored here.
1436 switch (imode) {
1437 case 0:
1438 case 2:
1439 if (kUseCPAR) {
1440 success &= LoadLibrary("STEERBase", mode, kTRUE);
1441 success &= LoadLibrary("ESD", mode, kTRUE);
1442 success &= LoadLibrary("AOD", mode, kTRUE);
1443 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
1444 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
d8f21f85 1445 success &= LoadLibrary("ROOTFILES", mode, kTRUE);
bbb42949 1446 // success &= LoadLibrary("EventMixing", mode,kTRUE);
c38e3b95 1447 success &= LoadLibrary("CORRFW", mode, kTRUE);
1448 } else {
1449 success &= LoadLibrary("libSTEERBase.so", mode);
1450 success &= LoadLibrary("libESD.so", mode);
1451 success &= LoadLibrary("libAOD.so", mode);
1452 success &= LoadLibrary("libANALYSIS.so", mode);
1453 success &= LoadLibrary("libANALYSISalice.so", mode);
bbb42949 1454 // success &= LoadLibrary("libEventMixing.so", mode);
c38e3b95 1455 success &= LoadLibrary("libCORRFW.so", mode);
1456 gROOT->ProcessLine(".include $ALICE_ROOT/include");
1457 }
1458 break;
1459 case 1:
1460 Int_t ires = -1;
1461 if (kProofUseAFPAR && !gSystem->AccessPathName(kProofAFversion)) ires = gProof->UploadPackage(kProofAFversion);
1462 if (ires < 0) {
1463 success &= LoadLibrary("STEERBase", mode);
1464 success &= LoadLibrary("ESD", mode);
1465 success &= LoadLibrary("AOD", mode);
1466 success &= LoadLibrary("ANALYSIS", mode);
1467 success &= LoadLibrary("ANALYSISalice", mode);
070f06d2 1468 success &= LoadLibrary("EventMixing", mode);
c38e3b95 1469 success &= LoadLibrary("CORRFW", mode);
1470 } else {
1471 ires = gProof->EnablePackage(kProofAFversion);
1472 if (ires<0) success = kFALSE;
1473 success &= LoadLibrary("CORRFW", mode);
1474 }
1475 break;
1476 default:
1477 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
1478 return kFALSE;
1479 }
1480 if (success) {
1481 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
1482 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
1483 gSystem->GetIncludePath());
1484 } else {
1485 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: FAILED");
1486 }
1487
1488 return success;
1489}
1490
1491//______________________________________________________________________________
1492Bool_t LoadAnalysisLibraries(const char *mode)
1493{
1494// Load common analysis libraries.
9748e967 1495 Bool_t success = kTRUE;
cfd02305 1496 if (useTender) {
1497 if (!LoadLibrary("TENDER", mode, kTRUE) ||
1498 !LoadLibrary("TENDERSupplies", mode, kTRUE)) return kFALSE;
1499 }
c38e3b95 1500 if (iESDfilter) {
b0a36f28 1501 /*
c38e3b95 1502 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
1503 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
b0a36f28 1504 */
c38e3b95 1505 }
1506 // JETAN
e6993a52 1507 if (iJETANLib) {
b53f2e4f 1508 // this part needs some rework in case we do not need the fastjed finders for processing
1509 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
c38e3b95 1510 if (!strcmp(mode, "PROOF")){
ef1e462f 1511 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libCGAL.so\"\)", kTRUE);
c38e3b95 1512 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libfastjet.so\"\)", kTRUE);
1513 // problem when loading siscone copiled with different gcc version??
1514 // gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libsiscone.so\"\)", kTRUE);
1515 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libSISConePlugin.so\"\)", kTRUE);
1516 }
b53f2e4f 1517 if(!kUsePAR){
e84da0a5 1518 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
1519 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
1520 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
1521 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
1522 }
1523 else{
1524 // par files plus FASTJET needs some extra work... need to change
1525 // the loading sequence in the auto generated .C file
1526 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
1527 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
1528 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
1529 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
1530 }
c38e3b95 1531 if (!LoadLibrary("FASTJETAN", mode, kTRUE)) return kFALSE;
1532 }
1533 if(iPWG4JetTasks){
c38e3b95 1534 if (!LoadLibrary("PWG4JetTasks", mode, kTRUE)) return kFALSE;
1535 }
58ef946c 1536
c38e3b95 1537 if(iPWG1QASym){
34fc6450 1538 if (!LoadSource(Form("%s/PWG1/AliAnalysisTaskQASym.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
c38e3b95 1539 }
121e4bd5 1540 if(iPWG4TmpSourceSara){
c166d299 1541 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
34fc6450 1542 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskEta.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
c580ebbb 1543 }
c166d299 1544
4721d8c5 1545 if(iEMCUtilLibs){
1546 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
1547 !LoadLibrary("PHOSUtils", mode, kTRUE)) return kFALSE;
1548 }
1549
911a740f 1550 if (iPWG4PartCorrLibs) {
4721d8c5 1551 if (!LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
c38e3b95 1552 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
1553 }
4721d8c5 1554 if(iPWG4JCORRAN){
1555 // PWG4 particle correlations
1556 if(!LoadLibrary("PWG4JCORRAN",mode,kTRUE))return kFALSE;
1557 }
d2e6cdd5 1558 if (iPWG4JetCorr) {
1559 if (!LoadLibrary("PWG4JetCorrel", mode, kTRUE)) return kFALSE;
1560 }
121e4bd5 1561 if (iPWG4omega3pi) {
1562 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
1563 }
17d96675 1564 if (iPWG4GammaConvLib) {
53c63663 1565 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
1566 }
c38e3b95 1567
1568 ::Info("AnalysisTrainPWG4Jets.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
1569 return kTRUE;
1570}
1571
1572//______________________________________________________________________________
1573Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
1574{
1575// Load a module library in a given mode. Reports success.
1576 Int_t imode = -1;
1577 Int_t result;
1578 TString smodule(module);
1579 if (!strcmp(mode, "LOCAL")) imode = 0;
1580 if (!strcmp(mode, "PROOF")) imode = 1;
1581 if (!strcmp(mode, "GRID")) imode = 2;
1582 TString mod(module);
1583 if (!mod.Length()) {
1584 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Empty module name");
1585 return kFALSE;
1586 }
1587 // If a library is specified, just load it
1588 if (smodule.EndsWith(".so")) {
1589 mod.Remove(mod.Index(".so"));
1590 result = gSystem->Load(mod);
1591 if (result < 0) {
1592 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load library %s", module);
1593 return kFALSE;
1594 }
1595 if (rec) anaLibs += Form("%s.so ",mod.Data());
e84da0a5 1596 if (rec) anaLibsExtra += Form("%s.so ",mod.Data());
c38e3b95 1597 return kTRUE;
1598 }
1599 // Check if the library is already loaded
1600 if (strlen(gSystem->GetLibraries(Form("%s.so", module), "", kFALSE)) > 0)
1601 return kTRUE;
1602 switch (imode) {
1603 case 0:
1604 case 2:
1605 if (kUsePAR) {
1606 result = SetupPar(module);
1607 if (rec) anaPars += Form("%s.par ", module);
1608 } else {
1609 result = gSystem->Load(Form("lib%s.so", module));
1610 if (rec) anaLibs += Form("lib%s.so ", module);
1611 }
1612 break;
1613 case 1:
1614 if(!gSystem->AccessPathName(module)){
1615 ::Info("AnalysisTrainPWG4Jets.C::LoadLibrary", "Removing directory %s",module);
1616 gSystem->Exec(Form("rm -rf %s",module));
1617 }
1618 result = gProof->UploadPackage(module);
1619 if (result<0) {
1620 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
1621 if (result<0) {
1622 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
1623 return kFALSE;
1624 }
1625 }
1626 result = gProof->EnablePackage(module);
1627 break;
1628 default:
1629 return kFALSE;
1630 }
1631 if (result < 0) {
1632 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load module %s", module);
1633 return kFALSE;
1634 }
1635 return kTRUE;
1636}
1637
1638
1639
1640//______________________________________________________________________________
1641Bool_t LoadSource(const char *source, const char *mode, Bool_t rec=kFALSE)
1642{
1643// Load a module library in a given mode. Reports success.
1644 Int_t imode = -1;
1645 Int_t result = -1;
1646 if (!strcmp(mode, "LOCAL")) imode = 0;
1647 if (!strcmp(mode, "PROOF")) imode = 1;
1648 if (!strcmp(mode, "GRID")) imode = 2;
1649 TString ssource(source);
1650 TString basename = gSystem->BaseName(ssource.Data());
1651 if (!ssource.Length()) {
1652 ::Error("AnalysisTrainPWG4Jets.C::LoadSource", "Empty task name");
1653 return kFALSE;
1654 }
4d62ae1a 1655 // we have a source code so compile it
c38e3b95 1656 if (ssource.EndsWith(".cxx")) {
1657 // need to copy it here other wise the path is also used on grid...
1658 ssource.Remove(ssource.Index(".cxx"));
1659 basename.Remove(basename.Index(".cxx"));
1660 Printf("LoadSources:: Copying... path %s{cxx,h}",ssource.Data());
1661 gSystem->Exec(Form("cp %s.cxx . ",ssource.Data()));
1662 gSystem->Exec(Form("cp %s.h . ",ssource.Data()));
1663 // Path to code
1664 // only needed for local compilation, in grid and proof mode
1665 // the task headers are uploaded
1666 // path.Remove(path.Index(gSystem->BaseName(path.Data())));
1667 // Printf("LoadSources:: Including path %s",path.Data());
1668 // if(path.Length()>0)gROOT->ProcessLine(Form(".include %s",path.Data()));
1669 Printf("LoadSources:: Loading... path %s",basename.Data());
1670 switch (imode) {
1671 case 0:
b53f2e4f 1672 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1673 break;
1674 case 1:
b53f2e4f 1675 result = gProof->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1676 break;
1677 case 2:
b53f2e4f 1678 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1679 if (rec){
1680 // what we want to compile
1681 anaSources += Form("%s.cxx ",basename.Data());
1682 // what we need as input...
1683 anaLibs += Form("%s.cxx %s.h ",basename.Data(),basename.Data());
1684 }
1685 break;
1686 default:
1687 return kFALSE;
1688 }
1689 }
1690 if (result < 0) {
1691 ::Error("AnalysisTrainPWG4Jets.C::LoadSources", "Could not load source %s", source);
1692 return kFALSE;
1693 }
1694 return kTRUE;
1695}
1696
1697
1698//______________________________________________________________________________
1699TChain *CreateChain(const char *mode, const char *plugin_mode)
1700{
1701// Create the input chain
1702 Int_t imode = -1;
1703 if (!strcmp(mode, "LOCAL")) imode = 0;
1704 if (!strcmp(mode, "PROOF")) imode = 1;
1705 if (!strcmp(mode, "GRID")) imode = 2;
1706 TChain *chain = NULL;
1707 // Local chain
1708 switch (imode) {
1709 case 0:
1710 if (iAODanalysis) {
1711 if (!kLocalXMLDataset.Length()) {
1712 // Local AOD
1713 chain = new TChain("aodTree");
1714 TString line;
1715 ifstream in;
1716 in.open(kLocalDataList.Data());
37eb26ea 1717 Int_t ic = 0;
c38e3b95 1718 while (in.good()) {
1719 in >> line;
1720 if (line.Length() == 0) continue;
37eb26ea 1721 Printf("%d adding %s",ic,line.Data());
c38e3b95 1722 chain->Add(line.Data());
37eb26ea 1723 ic++;
c38e3b95 1724 }
1725 } else {
1726 // Interactive AOD
1727 chain = CreateChainSingle(kLocalXMLDataset, "aodTree");
1728 }
1729 } else {
1730 if (!kLocalXMLDataset.Length()) {
1731 // Local ESD
1732 chain = new TChain("esdTree");
1733 TString line;
1734 ifstream in;
1735 in.open(kLocalDataList.Data());
1736 while (in.good()) {
1737 in >> line;
1738 if (line.Length() == 0) continue;
1739 cout << " line = " << line << endl;
1740 chain->Add(line.Data());
1741 }
1742 } else {
1743 // Interactive ESD
1744 chain = CreateChainSingle(kLocalXMLDataset, "esdTree");
1745 }
1746 }
1747 break;
1748 case 1:
1749 break;
1750 case 2:
1751 if (kPluginUse) {
1752// AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1753// AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1754 } else {
1755 TString treeName = "esdTree";
1756 if (iAODanalysis) treeName = "aodTree";
1757 chain = CreateChainSingle("wn.xml", treeName);
1758 }
1759 break;
1760 default:
1761 }
1762 if (chain && chain->GetNtrees()) return chain;
1763 return NULL;
1764}
1765
1766//______________________________________________________________________________
1767TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
1768{
1769 printf("*******************************\n");
1770 printf("*** Getting the ESD Chain ***\n");
1771 printf("*******************************\n");
1772 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
1773
1774 if (!myCollection) {
1775 ::Error("AnalysisTrainPWG4Jets.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
1776 return NULL ;
1777 }
1778
1779 TChain* chain = new TChain(treeName);
1780 myCollection->Reset() ;
1781 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
1782 chain->ls();
1783 return chain;
1784}
1785
1786//______________________________________________________________________________
1787Int_t SetupPar(char* pararchivename)
1788{
1789 if (!pararchivename || !strlen(pararchivename)) return -1;
1790 char processline[1024];
1791 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
1792 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
1793 ::Info("AnalysisTrainPWG4Jets.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
9748e967 1794 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
1795 Form("%s.par",pararchivename));
c38e3b95 1796 } else {
1797 ::Error("AnalysisTrainPWG4Jets.C::SetupPar", "Cannot find %s.par", pararchivename);
1798 return -1;
1799 }
1800 }
1801 if (kPluginUse && kSaveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, kTrainName.Data()));
1802 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
1803
1804 TString ocwd = gSystem->WorkingDirectory();
1805 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
1806
1807 // check for BUILD.sh and execute
1808 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
1809 printf("*******************************\n");
1810 printf("*** Building PAR archive ***\n");
1811 printf("*******************************\n");
1812 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
1813 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
1814 return -1;
1815 }
1816 }
1817
1818 // check for SETUP.C and execute
1819 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
1820 printf("*******************************\n");
1821 printf("*** Setup PAR archive ***\n");
1822 printf("*******************************\n");
1823 gROOT->Macro("PROOF-INF/SETUP.C");
1824 }
4478beda 1825 if (!gSystem->ChangeDirectory(ocwd.Data())){
1826 Error("Change back directory",Form("Cannot change to %s",ocwd.Data()));
1827 return -1;
1828 }
c38e3b95 1829 return 0;
1830}
1831
1832//______________________________________________________________________________
1833AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
1834{
1835// Check if user has a valid token, otherwise make one. This has limitations.
1836// One can always follow the standard procedure of calling alien-token-init then
1837// source /tmp/gclient_env_$UID in the current shell.
c8fb37dd 1838// if (!AliAnalysisGrid::CreateToken()) return NULL;
c38e3b95 1839 AliAnalysisAlien *plugin = new AliAnalysisAlien();
1840// Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
1841 plugin->SetRunMode(plugin_mode);
1842 if (kPluginUseProductionMode) plugin->SetProductionMode();
1843 plugin->SetJobTag(kJobTag);
d8f21f85 1844 plugin->SetNtestFiles(1);
c38e3b95 1845// plugin->SetPreferedSE("ALICE::NIHAM::File");
1846// Set versions of used packages
e84da0a5 1847 plugin->SetAPIVersion("V1.1x");
1848 // plugin->SetAPIVersion("V1.0x");
1849// plugin->SetAPIVersion("V2.4");
c38e3b95 1850 plugin->SetROOTVersion(kPluginRootVersion);
1851 plugin->SetAliROOTVersion(kPluginAliRootVersion);
1852// Declare input data to be processed.
1853// Method 1: Create automatically XML collections using alien 'find' command.
1854// Define production directory LFN
1855 plugin->SetGridDataDir(kGridDatadir.Data());
1856// Set data search pattern
d8f21f85 1857 if (iAODanalysis) plugin->SetDataPattern(" *AliAOD.Jets.root");
c8fb37dd 1858 // else plugin->SetDataPattern(Form(" %s/*/*ESD.tag.root",kGridPassPattern.Data()));
1859 else plugin->SetDataPattern(Form(" %s/*/*AliESDs.root",kGridPassPattern.Data()));
c38e3b95 1860// ...then add run numbers to be considered
1861// plugin->SetRunRange(kGridRunRange[0], kGridRunRange[1]);
1862 for (Int_t i=kGridRunRange[0]; i<=kGridRunRange[1]; i++) {
1863 Printf("AnalysisTrainPWG4Jets Adding run number %s", Form(kGridRunPattern.Data(),i));
1864 plugin->AddRunNumber(Form(kGridRunPattern.Data(),i));
1865 }
1866
1867 if(kGridLocalRunList.Length()>0){
1868 ifstream in1;
1869 in1.open(kGridLocalRunList.Data());
1870 int iRun;
4d16db9c 1871 int icount = 0;
9a5c5b1e 1872 /*
e84da0a5 1873 char c;
1874 char cLine[250];
1875 while(!in1.eof()){
1876 c = in1.get();
1877 if ( (c >= '0') && (c <= '9') )
1878 {
d8f21f85 1879 in1.putback (c)s;
e84da0a5 1880 in1>>iRun;
1881 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1882 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1883 }
1884 else
1885 {
1886 in1.putback (c);
1887 in1.getline(cLine,250);
9a5c5b1e 1888
1889 }
1890 }
1891 */
9748e967 1892
1893 Int_t nRun = 0;
9a5c5b1e 1894
1895 // just use run numbers, negatives will be excluded
1896 while(in1>>iRun){
ffab794c 1897 if(iRun>=0){
1898 if(iRun>=0&&nRun>=kGridOffsetRunFromList&&(nRun<kGridMaxRunsFromList)){
f12de05f 1899 Printf("AnalysisTrainPWG4Jets Adding run number from File %d: %s",nRun,Form(kGridRunPattern.Data(),iRun));
9a5c5b1e 1900 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
ffab794c 1901
1902 }
1903 else{
f12de05f 1904 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d: %d",nRun, iRun);
ffab794c 1905 }
36c36a0c 1906 nRun++;
9a5c5b1e 1907 }
1908 else{
f12de05f 1909 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d: %d",nRun, iRun);
e84da0a5 1910 }
c38e3b95 1911 }
1912 }
1913
1914// Method 2: Declare existing data files (raw collections, xml collections, root file)
1915// If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
1916// XML collections added via this method can be combined with the first method if
1917// the content is compatible (using or not tags)
1918// plugin->AddDataFile("tag.xml");
1919// plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
1920// Define alien work directory where all files will be copied. Relative to alien $HOME.
3878a941 1921 TString alien_workdir = "";
1922
1923 if (iAODanalysis) alien_workdir += "analysisAOD";
1924 else alien_workdir += "analysisESD";
1925 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1926 plugin->SetGridWorkingDir(alien_workdir.Data());
1927
c38e3b95 1928 // Declare alien output directory. Relative to working directory.
1929 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1930 plugin->SetGridOutputDir(kGridOutdir);
1931
1932 // Add external packages
1933 if (iJETAN||iDIJETAN) {
23adcac8 1934 plugin->AddExternalPackage("boost::v1_43_0");
1935 plugin->AddExternalPackage("cgal::v3.6");
1936 plugin->AddExternalPackage("fastjet::v2.4.2");
c38e3b95 1937 }
1938
1939
1940 // set extra libs before par file compilation
1941 anaLibs += kGridExtraFiles;
1942 anaLibs = anaLibs.Strip();
e84da0a5 1943 Printf("anaLibs %s",anaLibs.Data());
1944 Printf("anaLibsExtra %s",anaLibsExtra.Data());
1945
1946 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs.Data());
1947 if (anaLibsExtra.Length()) plugin->SetAdditionalRootLibs(anaLibsExtra.Data());
c38e3b95 1948
1949 TString ana_sources = "";
1950 TString ana_add = "";
1951 if (kUsePAR && anaPars.Length()) {
1952 printf("%s\n", anaPars.Data());
1953 TObjArray *arr;
1954 TObjString *objstr;
1955 arr = anaPars.Tokenize(" ");
1956 TIter next(arr);
1957 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
1958 delete arr;
1959 }
1960
1961// Declare the analysis source files names separated by blancs. To be compiled runtime
1962// using ACLiC on the worker nodes.
1963 ana_sources = anaSources.Strip();
1964// Declare all libraries (other than the default ones for the framework. These will be
1965// loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
1966
1967 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
1968 plugin->SetExecutableCommand(kPluginExecutableCommand.Data());
4721d8c5 1969 // Declare the output file names separated by blancs.
1970 // (can be like: file.root or file.root@ALICE::Niham::File)
c38e3b95 1971 plugin->SetMergeExcludes(kGridMergeExclude);
1972 plugin->SetMaxMergeFiles(kGridMaxMergeFiles);
1973 plugin->SetNrunsPerMaster(kGridRunsPerMaster);
9a5c5b1e 1974 plugin->SetMergeViaJDL(kPluginMergeViaJDL);
4721d8c5 1975 // Use fastread option
9a5c5b1e 1976 plugin->SetFastReadOption(kPluginFastReadOption);
4721d8c5 1977 // UseOverwrite mode
9a5c5b1e 1978 plugin->SetOverwriteMode(kPluginOverwriteMode);
4721d8c5 1979 // Optionally define the files to be archived.
1980 // plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
dc6a7461 1981 plugin->SetOutputToRunNo(kPluginOutputToRunNumber); // write the output to subdirs named after run number
c38e3b95 1982
1983 // Put default output files to archive
1984 TString listhists = "";
1985 TString listaods = "";
1986 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1987 TIter next(mgr->GetOutputs());
1988 AliAnalysisDataContainer *output;
1989 while ((output=(AliAnalysisDataContainer*)next())) {
1990 const char *filename = output->GetFileName();
1991 if (!(strcmp(filename, "default"))) {
53c63663 1992 if (!mgr->GetOutputEventHandler()) continue;
c38e3b95 1993 filename = mgr->GetOutputEventHandler()->GetOutputFileName();
e84da0a5 1994 if (listaods.Length()) listaods += " ";
c38e3b95 1995 listaods += filename;
c38e3b95 1996 } else {
e84da0a5 1997 if(!listhists.Contains(filename)){
1998 if (listhists.Length()) listhists += " ";
c38e3b95 1999 listhists += filename;
2000 }
2001 }
2002 }
53c63663 2003
53c63663 2004 if (mgr->GetExtraFiles().Length()) {
e84da0a5 2005 if (listaods.Length()) listaods += " ";
53c63663 2006 listaods += mgr->GetExtraFiles();
c38e3b95 2007 }
53c63663 2008
2009 // if we do not fill the aod we do not need to store it
4721d8c5 2010 // kGridMergeExclude = listaods;
e84da0a5 2011
e2afec0c 2012 if(kSaveAOD>=0){
4721d8c5 2013 TString outputFiles = "";
2014 outputFiles += mgr->GetExtraFiles();
2015 if (listhists.Length()) outputFiles += " ";
2016 outputFiles += listhists;
e84da0a5 2017 plugin->SetDefaultOutputs(kFALSE);
4721d8c5 2018 Printf("%s:%d Starting with the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
2019 // remove
2020 // no harm done when we try to remove something that is not there :)
2021 if(!(kSaveAOD&(1<<0))){
2022 outputFiles.ReplaceAll("AliAOD.root ","");
2023 listaods.ReplaceAll("AliAOD.root ","");
2024 }
2025 if(!(kSaveAOD&(1<<1))){
2026 if(kDeltaAODJetName.Length())outputFiles.ReplaceAll(kDeltaAODJetName.Data(),"");
2027 if(kDeltaAODJetName.Length())listaods.ReplaceAll(kDeltaAODJetName.Data(),"");
2028
2029 }
2030 if(!(kSaveAOD&(1<<2))){
2031 if(kDeltaAODPartCorrName.Length())outputFiles.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
2032 if(kDeltaAODPartCorrName.Length())listaods.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
2033 }
2034 if(!(kSaveAOD&(1<<3))){
2035 if(kDeltaAODJCORRANName.Length())outputFiles.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
2036 if(kDeltaAODJCORRANName.Length())listaods.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
2037 }
2038
2039 //
e2afec0c 2040 plugin->SetDefaultOutputs(kFALSE);
4721d8c5 2041 Printf("%s:%d Saving the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
2042 plugin->SetOutputFiles(outputFiles.Data());
e84da0a5 2043 }
53c63663 2044
4721d8c5 2045 TString outputArchive;
4d5d766e 2046 outputArchive = Form("log_archive.zip:std*@%s","disk=1");
e84da0a5 2047 listaods.ReplaceAll(" ", ",");
2048 listhists.ReplaceAll(" ", ",");
4d5d766e 2049 if (listhists.Length()){
2050 outputArchive += " ";
2051 outputArchive += "root_archive.zip:";
2052 outputArchive += listhists;
2053 if (listaods.Length()){
2054 outputArchive += ",";
2055 outputArchive += listaods;
2056 }
2057 outputArchive += Form("@%s", kGridOutputStorages.Data());
2058 }
2059 else{
2060
2061 if (listaods.Length()){
2062 // we have only aod'ish output
2063 outputArchive += " ";
2064 outputArchive += "root_archive.zip:";
2065 outputArchive += listaods;
2066 outputArchive += Form("@%s", kGridOutputStorages.Data());
2067 }
2068 else{
2069 // no other outputs than std..
c38e3b95 2070 ::Fatal("AnalysisTrainPWG4Jets", "No task output !");
4d5d766e 2071 }
c38e3b95 2072 }
4d5d766e 2073
17d96675 2074 plugin->SetDefaultOutputs(kFALSE);
c38e3b95 2075 plugin->SetOutputArchive(outputArchive);
17d96675 2076
4721d8c5 2077
4d5d766e 2078 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
c38e3b95 2079 plugin->SetAnalysisMacro(Form("%s.C", kTrainName.Data()));
4d5d766e 2080 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
c38e3b95 2081 plugin->SetSplitMaxInputFileNumber(kGridFilesPerJob);
4d5d766e 2082 // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
27cdf9c4 2083 // plugin->SetMaxInitFailed(5);
4d5d766e 2084 // Optionally resubmit threshold.
c8fb37dd 2085 // plugin->SetMasterResubmitThreshold(90);
4d5d766e 2086 // Optionally set time to live (default 30000 sec)
d4e8abc5 2087 plugin->SetTTL(54000); // 15h...
4d5d766e 2088 // Optionally set input format (default xml-single)
c38e3b95 2089 plugin->SetInputFormat("xml-single");
4d5d766e 2090 // Optionally modify the name of the generated JDL (default analysis.jdl)
c38e3b95 2091 plugin->SetJDLName(Form("%s.jdl", kTrainName.Data()));
4d5d766e 2092 // Optionally modify the executable name (default analysis.sh)
c38e3b95 2093 plugin->SetExecutable(Form("%s.sh", kTrainName.Data()));
4d5d766e 2094 // Optionally modify job price (default 1)
c38e3b95 2095 plugin->SetPrice(1);
4d5d766e 2096 // Optionally modify split mode (default 'se')
c38e3b95 2097 plugin->SetSplitMode("se");
2098 return plugin;
2099}
2100
2101//______________________________________________________________________________
2102void WriteConfig()
2103{
2104// Write train configuration in a file. The file name has the format:
2105// train_[trainName]_ddMonthyyyy_time.C
2106 if (kUseDate) {
2107 gSystem->Exec("date +%d%b%Y_%Hh%M > date.tmp");
2108 ifstream fdate("date.tmp");
2109 if (!fdate.is_open()) {
2110 ::Error("AnalysisTrainPWG4Jets.C::Export","Could not generate file name");
2111 return;
2112 }
2113 const char date[64];
2114 fdate.getline(date,64);
2115 fdate.close();
2116 gSystem->Exec("rm date.tmp");
2117 kTrainName = Form("train_%s_%s", kTrainName.Data(), date);
2118 } else {
2119 kTrainName = Form("train_%s", kTrainName.Data());
2120 }
2121 TString cdir = gSystem->WorkingDirectory();
2122 gSystem->MakeDirectory(kTrainName);
2123 gSystem->ChangeDirectory(kTrainName);
2124 ofstream out;
2125 out.open(Form("%sConfig.C",kTrainName.Data()), ios::out);
2126 if (out.bad()) {
2127 ::Error("AnalysisTrainPWG4Jets.C::Export", "Cannot open ConfigTrain.C for writing");
2128 return;
2129 }
2130 out << "{" << endl;
2131 out << " kTrainName = " << "\"" << kTrainName.Data() << "\";" << endl;
2132 out << " kProofCluster = " << "\"" << kProofCluster.Data() << "\";" << endl;
2133 out << " kProofUseAFPAR = " << kProofUseAFPAR << ";" << endl;
2134 if (kProofUseAFPAR)
2135 out << " kProofAFversion = " << kProofAFversion.Data() << ";" << endl;
2136 out << " kProofDataSet = " << "\"" << kProofDataSet.Data() << "\";" << endl;
2137 out << " kPluginUse = " << kPluginUse << ";" << endl;
2138 out << " kUsePAR = " << kUsePAR << ";" << endl;
2139 out << " kUseCPAR = " << kUseCPAR << ";" << endl;
2140 out << " kPluginRootVersion = " << "\"" << kPluginRootVersion.Data() << "\";" << endl;
2141 out << " kPluginAliRootVersion = " << "\"" << kPluginAliRootVersion.Data() << "\";" << endl;
2142 out << " kGridDatadir = " << "\"" << kGridDatadir.Data() << "\";" << endl;
2143 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
2144 out << " kGridOutdir = " << "\"" << kGridOutdir.Data() << "\";" << endl;
2145 out << " kGridMaxMergeFiles = " << kGridMaxMergeFiles << ";" << endl;
2146 out << " kGridMergeExclude = " << "\"" << kGridMergeExclude.Data() << "\";" << endl;
2147 out << " kGridRunsPerMaster = " << kGridRunsPerMaster << ";" << endl;
2148 out << " kGridFilesPerJob = " << kGridFilesPerJob << ";" << endl;
2149 out << " kGridRunRange[0] = " << kGridRunRange[0] << ";" << endl;
2150 out << " kGridRunRange[1] = " << kGridRunRange[1] << ";" << endl;
2151 out << " kUseDebug = " << kUseDebug << ";" << endl;
2152 out << " kUseMC = " << kUseMC << ";" << endl;
2153 out << " kUseESDTags = " << kUseESDTags << ";" << endl;
2154 out << " kUseKinefilter = " << kUseKinefilter << ";" << endl;
2155 out << " kUseTR = " << kUseTR << ";" << endl;
2156 out << " kUseAODTags = " << kUseAODTags << ";" << endl;
2157 out << " kSaveTrain = " << "kFALSE;" << endl << endl;
2158 out << " // Analysis modules" << endl;
2159 out << " iAODanalysis = " << iAODanalysis << ";" << endl;
2160 out << " iAODhandler = " << iAODhandler << ";" << endl;
2161 out << " iESDfilter = " << iESDfilter << ";" << endl;
2162 out << " iJETAN = " << iJETAN << ";" << endl;
2163 out << "// Configuration fot the wagons" << endl;
2164 out << "}" << endl;
2165 ::Info("AnalysisTrainPWG4Jets.C::WriteConfig", "Train configuration wrote to file %s", Form("config_%s.C", kTrainName.Data()));
2166 gSystem->ChangeDirectory(cdir);
2167}
2168
2169//______________________________________________________________________________
2170Bool_t LoadConfig(const char *filename)
2171{
2172// Read train configuration from file
2173 if (gSystem->AccessPathName(filename)) {
2174 ::Error("AnalysisTrainPWG4Jets.C::LoadConfig", "Config file name not found");
2175 return kFALSE;
2176 }
2177 gROOT->ProcessLine(Form(".x %s", filename));
2178 ::Info("AnalysisTrainPWG4Jets.C::LoadConfig", "Train configuration loaded from file %s", filename);
2179 return kTRUE;
2180}
2181
2182Bool_t PatchJDL(){
2183 Printf(">>> Patching JDL");
2184 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
2185 AliAnalysisAlien* gridHandler = (AliAnalysisAlien*)mgr->GetGridHandler();
2186 TGridJDL *jdl = gridHandler->GetGridJDL();
2187 if(iJETAN)jdl->AddToPackages("fastjet","v2.4.0");
2188 gridHandler->WriteJDL(kFALSE);
0971dabc 2189 Printf("<<< Patching JDL");
c38e3b95 2190 return kTRUE;
2191}
2192
2193Bool_t PatchAnalysisMacro(){
4721d8c5 2194 Printf(">>> Patching AnalysisMacro");
2195 gSystem->Exec(Form("mv %s.C %s.C_tmp",kTrainName.Data(),kTrainName.Data()));
c38e3b95 2196
2197 ifstream in1;
2198 in1.open(Form("%s.C_tmp", kTrainName.Data()));
2199 char cLine[250];
2200 TString st;
2201 while(in1.getline(cLine,250)){
2202 st += cLine;
2203 st += "\n";
2204 }
4721d8c5 2205 Int_t index= -1;
c38e3b95 2206 index = st.Index("gSystem->Load(\"libPhysics\");");
2207 index += strlen("gSystem->Load(\"libPhysics\");");
4721d8c5 2208 /*
c38e3b95 2209 TObjArray *arr;
2210 TObjString *objstr;
2211 arr = anaLibs.Tokenize(" ");
2212 TIter next(arr);
4721d8c5 2213
c38e3b95 2214 add += "\n\n // added by CKB \n";
2215 while ((objstr=(TObjString*)next())){
e84da0a5 2216 if(objstr->GetString().Contains("PWG3"))continue;
c38e3b95 2217 if(objstr->GetString().EndsWith(".so"))add += Form("gSystem->Load(\"%s\");\n",objstr->GetString().Data());
2218 }
2219 delete arr;
4721d8c5 2220 */
3878a941 2221 // add += Form("AliLog::SetGlobalLogLevel(%d);\n",AliLog::GetGlobalLogLevel());
4721d8c5 2222 TString add = "";
2223
2224 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2225 add += "\n\n // added by CKB \n";
46534866 2226 if(kErrorIgnoreLevel>0)add += Form("gErrorIgnoreLevel = %d;\n",kErrorIgnoreLevel);
23adcac8 2227 add += "\n gSystem->AddIncludePath(\"./\"); \n";
f4132e7d 2228 add += "\n gSystem->SetFPEMask(); \n";
2229
2230
4721d8c5 2231 if(gGrid&&kPluginAliRootVersion.Length()==0){
bbb42949 2232 /*
4721d8c5 2233 add += "\n // Dirty hack for TRD reference data \n";
2234 add += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2235 add += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2236 add += "\"); \n";
bbb42949 2237 */
c38e3b95 2238 }
bbb42949 2239
4721d8c5 2240 add += "// BKC \n\n";
2241 st.Insert(index,add.Data());
e84da0a5 2242
2243 if(kUseDebug){
23adcac8 2244 // st.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
e84da0a5 2245 }
2246
4721d8c5 2247 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
2248 index = st.Index("gSystem->AddIncludePath(\"-I$"); // uncommen $ALICE_ROOT include for par files
2249 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2250 st.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2251 }
c166d299 2252
46534866 2253 if(AliLog::GetGlobalLogLevel()==AliLog::kFatal){
2254 index = st.Index("AliLog::SetGlobal"); // ncomment setting of log level, do my own
2255 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2256 st.Insert(index,"AliLog::SetGlobalLogLevel(AliLog::kFatal);// CKB \n // CKB comment out for own setting \n //");
2257 }
2258
c38e3b95 2259 ofstream out;
2260 out.open(Form("%s.C", kTrainName.Data()));
2261 if (out.bad()) {
2262 return kFALSE;
2263 }
2264 out << st << endl;
2265 Printf("<<< Patching AnalysisMacro");
4721d8c5 2266
2267
2268
2269
2270
2271 Printf(">>> Patching Merge Macro");
2272 gSystem->Exec(Form("mv %s_merge.C %s_merge.C_tmp",kTrainName.Data(),kTrainName.Data()));
2273
2274 ifstream in2;
2275 in2.open(Form("%s_merge.C_tmp", kTrainName.Data()));
2276 TString st2;
2277 while(in2.getline(cLine,250)){
2278 st2 += cLine;
2279 st2 += "\n";
2280 }
2281 index = st2.Index("gSystem->Load(\"libPhysics\");");
2282 index += strlen("gSystem->Load(\"libPhysics\");");
2283 TString add2 = "";
23adcac8 2284 add2 += "\n gSystem->AddIncludePath(\"./\"); \n";
4721d8c5 2285 if(gGrid&&kPluginAliRootVersion.Length()==0){
bbb42949 2286 /*
4721d8c5 2287 add2 += "\n // Dirty hack for TRD reference data \n";
2288 add2 += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2289 add2 += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2290 add2 += "\"); \n";
bbb42949 2291 */
4721d8c5 2292 }
2293 add2 += "// BKC \n\n";
2294 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2295 st2.Insert(index,add.Data());
2296
2297
2298 if(kUseDebug){
23adcac8 2299 // st2.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
4721d8c5 2300 }
2301
2302 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
46534866 2303 index = st2.Index("gSystem->AddIncludePath(\"-I$"); // uncomment $ALICE_ROOT include for par files
4721d8c5 2304 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2305 st2.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2306 }
2307
2308 // do not exclude the extra files from merign, this is done explicitly in this train script
92d850d5 2309 // index = st2.Index("mergeExcludes +="); // uncommen $ALICE_ROOT include for par files
2310 // if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2311 // st2.Insert(index,"// CKB comment out, handled explicitly by the train macro \n //");
4721d8c5 2312
2313
2314 ofstream out2;
2315 out2.open(Form("%s_merge.C", kTrainName.Data()));
2316 if (out2.bad()) {
2317 return kFALSE;
2318 }
2319 out2 << st2 << endl;
2320 Printf("<<< Patching Merging Macro");
2321
2322
2323
c38e3b95 2324 return kTRUE;
2325
2326}