Split: fix refs to AddTaskPhysicsSelection.C
[u/mrichter/AliRoot.git] / PWGJE / macros / AnalysisTrainPWGJets.C
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c38e3b95 1//===================== ANALYSIS TRAIN =========================================
2// To use: copy this macro to your work directory, modify the global part to match
3// your needs, then run root.
4// root[0] .L AnalysisTrain.C
5// Grid full mode as below (other modes: test, offline, submit, terminate)
121e4bd5 6// root[1] AnalysisTrainPWG-244Jets("grid", "full")
c38e3b95 7// CAF mode (requires root v5-23-02 + aliroot v4-16-Rev08)
8// root[2] AnalysisTrainPWG4Jets("proof")
9// Local mode requires AliESds.root or AliAOD.root in ./data directory
10// root[3] AnalysisTrainPWG4Jets("local")
11// In proof and grid modes, a token is needed and sourcing the produced environment file.
12//
13// If 'saveTrain' flag is set, the train will generate a directory name and run
14// in this directory. A configuration file 'ConfigTrain.C' will be generated.
15// One can replay at any time the train via:
16// root[1] AnalysisTrainPWG4Jets(ana_mode, plugin_mode, "train_default_<date>/ConfigTrain.C")
17
18// For Usage with fastjet run in "offline" first and then "submit"
19// jdl and analysismacro are automatically patched after "offline" mode
20
21// =============================================================================
22// ### General Steering variables
23// =============================================================================
24//== general setup variables
e5ee1c19 25Int_t iRunFlag = 0;
c38e3b95 26TString kTrainName = "testAnalysis"; // *CHANGE ME* (no blancs or special characters)
a89cc1af 27TString kJobTag = "PWGJE Jet Tasks analysis train configured"; // *CHANGE ME*
c38e3b95 28
29// Usage of par files ONLY in grid mode and ONLY if the code is not available
30// in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
31// To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
32// AliRoot.
33Bool_t kUsePAR = kFALSE; // use par files for extra libs
34Bool_t kUseCPAR = kFALSE; // use par files for common libs
7b90d977 35Bool_t kFillAOD = kTRUE; // switch of AOD filling for on the fly analysis
a7e27517 36Bool_t kFilterAOD = kTRUE;
30f922ad 37Float_t kJetTriggerPtCut = 20; // pT for jet trigger in case of iFilter==2
4721d8c5 38Int_t kSaveAOD = 8; // Bit switch 1 = Full AOD 2 = Jet AOD , 4 = PartCorr, 8 = JCORRAN
c38e3b95 39//== general input and output variables
9a5c5b1e 40
c38e3b95 41Int_t iAODanalysis = 1; // Analysis on input AOD's
2a7c86bc 42Int_t iFilterAnalysis = 0; // Analysis on input AOD's
c38e3b95 43Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
f4132e7d 44Int_t iCentralitySelection = 0; // Use the centrality
17f4943e 45Int_t iESDfilter = 1; // ESD to AOD filter (barrel + muon tracks)
e84da0a5 46Int_t iPhysicsSelection = 1; // ESD to AOD filter (barrel + muon tracks)
d8f21f85 47UInt_t iPhysicsSelectionFlag = 1; // set by pyshics selection and passed to the task, kMB, kUserDefined etc
cfd02305 48Bool_t useTender = kFALSE; // use tender wagon
c38e3b95 49Bool_t kUseKinefilter = kFALSE; // use Kinematics filter
50Bool_t kUseMuonfilter = kFALSE; // use Kinematics filter
a89cc1af 51TString kCommonOutputFileName = "PWGJE_JetTasksOutput.root";
52TString kCaloQAOutputFileName = "PWGJE_CaloQAOutput.root";
c38e3b95 53
54
55//== general process variables
56
57// ### Other flags to steer the analysis
58//==============================================================================
9a5c5b1e 59Bool_t kSkipTerminate = kTRUE; // Do not call Teminate
c38e3b95 60Bool_t kUseDate = kFALSE; // use date in train name
61Bool_t kUseDebug = kTRUE; // activate debugging
46534866 62Int_t kErrorIgnoreLevel = -1; // takes the errror print level from .rootrc
63// From TError.h:
64// const Int_t kUnset = -1;
65// const Int_t kPrint = 0;
66// const Int_t kInfo = 1000;
67// const Int_t kWarning = 2000;
68// const Int_t kError = 3000;
69// const Int_t kBreak = 4000;
70// const Int_t kSysError = 5000;
71// const Int_t kFatal = 6000;
72Int_t kUseSysInfo = 0; // activate debugging
45f12683 73Long64_t kNumberOfEvents = 1234567890; // Number of events to process from the chain
c38e3b95 74Bool_t kUseMC = kTRUE; // use MC info
75Bool_t kIsMC = kTRUE; // is MC info, if false it overwrites Use(AOD)MC
76Bool_t kUseAODMC = kTRUE; // use MC infA
77Bool_t kUseESDTags = kFALSE; // use ESD tags for selection
78Bool_t kUseTR = kFALSE; // use track references
79Bool_t kUseAODTags = kFALSE; // use AOD tags
80Bool_t kSaveTrain = kFALSE; // save train configuration as:
f4132e7d 81Bool_t kIsPbPb = kFALSE; // Pb+Pb
c38e3b95 82
9a5c5b1e 83
c38e3b95 84// ### Analysis modules to be included. Some may not be yet fully implemented.
85//==============================================================================
a89cc1af 86Int_t iJETAN = 1; // Jet analysis // 1 write standard 2 write non-standard jets, 3 wrtie both
87Int_t iJETANReader = 0; // Jet analysis // DEV
88Int_t iJETANFinder = 0; // Jet analysis // DEV
e5ee1c19 89Int_t iJETSUBTRACT = 1; // Jet background subtration
78bc93b3 90TList kJetListSpectrum; // list of jets contains TObjString of possible jet finder names
91TExMap kJetMapSpectrum; // Maps the jet finder pairs to be used in the spectrum task second number negative no pair other wise (j1+1) + (1000 * (j2+1)) +10000 * (j3+1)
92TExMap kJetBackMapSpectrum; // Maps the jet finder pairs with the background branch used, just for countint of trackrefs
93Int_t kJetMapOffset[3] = {10000,100,1};
d8f21f85 94TString kDefaultJetBranch = ""; // is currently set when filled (iJETAN or clusters) or from config macro
37eb26ea 95TString kDefaultJetBackgroundBranch = ""; // is currently set when filled (jet clsuters
c08c3ad2 96TString kDefaultJetBackgroundBranchCut1 = ""; // is currently set when filled (jet clsuters
2eded560 97TString kDefaultJetBackgroundBranchCut2 = ""; // is currently set when filled (jet clsuters
37eb26ea 98TString kDefaultJetBackgroundBranch_extra = ""; // is currently set when filled (jet clsuters)
a7e27517 99TString kJetSubtractBranches = ""; // is currently set when filled (jet clsuters
c08c3ad2 100TString kJetSubtractBranchesCut1 = ""; // is currently set when filled (jet clsuters
2eded560 101TString kJetSubtractBranchesCut2 = ""; // is currently set when filled (jet clsuters
1a2bb6d5 102TString kJetSubtractBranches_extra = ""; // is currently set when filled (jet clsuters
a7e27517 103
d8f21f85 104TString kDefaultJetBranchMC = ""; // is currently set when filled (iJETAN or clusters) or from config macro
105TString kDefaultJetBackgroundBranchMC = ""; // is currently set when filled (jet clsuters
106TString kDefaultJetBranchMC2 = ""; // is currently set when filled (iJETAN or clusters) or from config macro
107TString kDefaultJetBackgroundBranchMC2 = ""; // is currently set when filled (jet clsuters
a31b8a87 108TString kJetSubtractMask1 = "B0";
109TString kJetSubtractMask2 = "B%d";
c38e3b95 110Int_t iDIJETAN = 1;
e6993a52 111Int_t iJETANLib = 1;
d89b8229 112Int_t iJETANdevLib = 0;
2bfe5463 113Int_t iPWGPPQASym = 0; // Eva's QA task compiled on the fly...
36c36a0c 114Int_t iPWG4FastEmbedding = 0; // Generate non-standard AOD for embedding
c38e3b95 115Int_t iPWG4JetTasks = 0; // all jet tasks flag for lib laoding
116Int_t iPWG4JetServices = 0; // jet spectrum analysis
117Int_t iPWG4JetSpectrum = 0; // jet spectrum analysis
bbb42949 118Int_t iPWG4JetResponse = 0; // jet response matrix
58ef946c 119Int_t iPWG4JCORRAN = 0; // JCORRAN module
c38e3b95 120Int_t iPWG4UE = 0; // Underlying Event analysis
e0c120d9 121Int_t iPWG4LeadingUE = 0; // Underlying Event analysis
122Int_t iPWG4CorrectionsUE = 0; // Underlying Event analysis
c166d299 123Int_t iPWG4TmpSourceSara = 0; // Underlying Event analysis not in svn
b101fa2e 124Int_t iPWG4Fragmentation = 1; // Official Fragmentation
9f77f0ce 125Int_t iPWG4JetChem = 0; // Jet chemistry
c38e3b95 126Int_t iPWG4PtQAMC = 0; // Marta's QA tasks
7b90d977 127Int_t iPWG4PtTrackQA = 0; // Marta's QA tasks
c38e3b95 128Int_t iPWG4PtSpectra = 0; // Marta's QA tasks
129Int_t iPWG4PtQATPC = 0; // Marta's QA tasks
4721d8c5 130Int_t iPWG4Cosmics = 0; // Marta's Cosmics Taks
c38e3b95 131Int_t iPWG4ThreeJets = 0; // Sona's thrust task
cc636095 132Int_t iPWG4QGSep = 0; // Sona's QG Separation task
133Int_t iPWG4Minijet = 0; // Eva's Mini Jet Task cluster task
b53f2e4f 134Int_t iPWG4KMeans = 0; // Andreas' KMeans task
d2e6cdd5 135Int_t iPWG4Cluster = 0; // CKB cluster task
4721d8c5 136Int_t iEMCUtilLibs = 0; // Flag to satisfy dependence on EMC utils
911a740f 137Int_t iPWG4PartCorrLibs = 0; // Gustavo's part corr analysis
c38e3b95 138Int_t iPWG4PartCorr = 0; // Gustavo's part corr analysis
d2e6cdd5 139Int_t iPWG4CaloQA = 0; // Gustavo's part corr analysis
140Int_t iPWG4JetCorr = 0; // Paul's jet corr analysis
911a740f 141Int_t iPWG4Tagged = 0; // Gustavo's part corr analysis
121e4bd5 142Int_t iPWG4omega3pi = 0; // Omega to 3 pi analysis (PWG4)
17d96675 143Int_t iPWG4GammaConvLib = 0; // Gamma Conversio
53c63663 144Int_t iPWG4GammaConv = 0; // Gamma Conversio
17d96675 145Int_t iPWG4CaloConv = 0; // Gamma Conversio
22e3ae6c 146Int_t kHighPtFilterMask = 32; // change depending on the used AOD Filter
e6993a52 147TString kDeltaAODJetName = "AliAOD.Jets.root";
78bc93b3 148TString kDeltaAODJetNameInput = "";
4721d8c5 149TString kDeltaAODJCORRANName = "AliAOD.JCORRAN.root";
f4132e7d 150TString kDeltaAODPartCorrName = "AliAOD.PartCorr.root";
36c36a0c 151TString kFastEmbeddingAOD = "emb/AliAOD.root";
1a2bb6d5 152TString kFastEmbAODList = "";
c38e3b95 153
154//==============================================================================
155// ### PROOF Steering varibales
156//==============================================================================
157//== proof setup variables
158TString kProofCluster = "alicecaf.cern.ch";
159Bool_t kProofUseAFPAR = kFALSE; // use AF special par file
160TString kProofAFversion = "AF-v4-17";
161//== proof input and output variables
162TString kProofDataSet = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
163Bool_t kProofSaveToAlien = kFALSE; // save proof outputs in AliEn train_[trainName]_ddMonthyyyy_time.C
164TString kProofOutdir = "";
165Bool_t kProofClearPackages = kFALSE;
166Int_t kProofEvents = 10000;
167Int_t kProofOffset = 0;
168//== proof process variables
169
170
171//==============================================================================
172// ### Grid plugin Steering varibiables
173//==============================================================================
174//== grid plugin setup variables
175Bool_t kPluginUse = kTRUE; // do not change
176Bool_t kPluginUseProductionMode = kFALSE; // use the plugin in production mode
8c227015 177TString kPluginRootVersion = "v5-30-02"; // *CHANGE ME IF MORE RECENT IN GRID*
0ed30c7f 178TString kPluginAliRootVersion = "v4-21-01a-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
9a5c5b1e 179Bool_t kPluginMergeViaJDL = kTRUE; // merge via JDL
180Bool_t kPluginFastReadOption = kFALSE; // use xrootd tweaks
181Bool_t kPluginOverwriteMode = kTRUE; // overwrite existing collections
dc6a7461 182Int_t kPluginOutputToRunNumber = 1; // write the output to subdirs named after run number
c38e3b95 183// TString kPluginExecutableCommand = "root -b -q";
184TString kPluginExecutableCommand = "source /Users/kleinb/setup_32bit_aliroot_trunk_clean_root_trunk.sh; alienroot -b -q ";
9a5c5b1e 185
c38e3b95 186// == grid plugin input and output variables
187TString kGridDatadir = "/alice/sim/PDC_08b/LHC09a1/AOD/";
9748e967 188Int_t kGridMaxRunsFromList = 999999999;
4d16db9c 189Int_t kGridOffsetRunFromList = 0; // skip the first n runs from the list
c38e3b95 190TString kGridLocalRunList = "";
191TString kGridOutdir = ""; // AliEn output directory. If blank will become output_<kTrainName>
3878a941 192TString kGridDataSet = ""; // sub working directory not to confuse different run xmls
c22feddd 193TString kGridExtraAliendirLevel = ""; // sub working directory not to confuse different run xmls
9748e967 194Int_t kGridRunRange[2] = {0, -1}; // Set the run range
c38e3b95 195TString kGridRunPattern = "%03d"; // important for leading zeroes!!
196TString kGridPassPattern = "";
197TString kGridExtraFiles = ""; // files that will be added to the input list in the JDL...
f12de05f 198Int_t kGridMaxMergeFiles = 25; // Number of files merged in a chunk grid run range
199TString kGridMergeExclude = "AliAOD.root"; // Files that should not be merged
200TString kGridOutputStorages = "disk=2"; // Make replicas on the storages
c38e3b95 201// == grid process variables
c28abe00 202Int_t kGridRunsPerMaster = 100; // Number of runs per master job
e84da0a5 203Int_t kGridFilesPerJob = 100; // Maximum number of files per job (gives size of AOD)
c38e3b95 204
205//==============================================================================
206// ### Local Steering variables
207//==============================================================================
208//== local setup variables
209//== local input and output variables
210TString kLocalXMLDataset = ""; // Change local xml dataset for local interactive analysis
211TString kLocalDataList = "local_deltaaod.txt"; // Change local xml dataset for local interactive analysis
212// == local process variables
213
f84df50f 214TString kPluginMode = "";
215TString kAnalysisMode = "";
c38e3b95 216
217
218// Temporaries.
219TString anaPars = "";
220TString anaLibs = "";
e84da0a5 221TString anaLibsExtra = "";
c38e3b95 222TString anaSources = "";
223// Function signatures
224class AliAnalysisAlien;
78bc93b3 225class AliAnalysisManager;
c38e3b95 226
227//______________________________________________________________________________
5c4489e2 228void AnalysisTrainPWGJets(const char *analysis_mode="local",
c38e3b95 229 const char *plugin_mode="",
4d16db9c 230 const char *config_file="",Int_t iOffset = 0,Int_t iTotal = 0)
c38e3b95 231{
232// Main analysis train macro. If a configuration file is provided, all parameters
233// are taken from there but may be altered by CheckModuleFlags.
3878a941 234
8ecf60e0 235 // these flag may be needed by the config file
f84df50f 236 kPluginMode = plugin_mode;
237 kAnalysisMode = analysis_mode;
8ecf60e0 238
239 if (strlen(config_file) && !LoadConfig(config_file)) return;
4d16db9c 240 if(iTotal>0)kGridMaxRunsFromList = iTotal; // overwrites the settings from config file
241 if(iOffset)kGridOffsetRunFromList = iOffset;
242 if(iOffset)kProofOffset = iOffset;
243
3878a941 244
c38e3b95 245 TString smode(analysis_mode);
246 smode.ToUpper();
247 if (kSaveTrain)WriteConfig();
8ecf60e0 248 // Check compatibility of selected modules
c38e3b95 249 CheckModuleFlags(smode);
ebad39a9 250 // gROOT->ProcessLine(".trace");
c38e3b95 251
252 printf("==================================================================\n");
253 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", kTrainName.Data(),smode.Data());
254 printf("==================================================================\n");
9748e967 255 printf("= Configuring analysis train for: =\n");
c38e3b95 256 if (iAODanalysis) printf("= AOD analysis =\n");
9748e967 257 else printf("= ESD analysis =\n");
258 if (iPhysicsSelection) printf("= Physics selection =\n");
f4132e7d 259 if(iCentralitySelection)printf("= Centrality selection =\n");
cfd02305 260 if (useTender) printf("= Using tender =\n");
c38e3b95 261 if (iESDfilter) printf("= ESD filter =\n");
262 if (iJETAN) printf("= Jet analysis =\n");
d89b8229 263 if (iJETANReader) printf("= Jet analysis Reader (DEV) =\n");
264 if (iJETANFinder) printf("= Jet analysis Finder (DEV) =\n");
c38e3b95 265 printf("==================================================================\n");
9748e967 266
267 char *printMask = ":: %20s %10d\n";
268 printf(printMask,"Fill AOD",(UInt_t)kFillAOD);
269 printf(printMask,"Save AOD", (UInt_t)kSaveAOD);
270 printf(printMask,"MC truth", (UInt_t)kUseMC);
271 printf(printMask,"KINE filter", (UInt_t)kUseKinefilter);
272 printf(printMask,"track refs", (UInt_t)kUseTR);
273 printf(printMask,"tags", (UInt_t)kUseESDTags);
274 printf(printMask,"AOD tags", (UInt_t)kUseAODTags);
275 printf(printMask,"debugging", (UInt_t)kUseDebug);
276 printf(printMask,"PAR files", (UInt_t)kUsePAR);
277 printf(printMask,"AliEn plugin", (UInt_t)kPluginUse);
a7e27517 278 printf(printMask,"JETAN subtract", (UInt_t)iJETSUBTRACT);
2bfe5463 279 printf(printMask,"PWGPP QA sym", iPWGPPQASym);
9748e967 280 printf(printMask,"PWG4 Source Sara",iPWG4TmpSourceSara);
aba42fcb 281 printf(printMask,"PWG4 Fragmentation",iPWG4Fragmentation);
9748e967 282 printf(printMask,"PWG4 Jet Chem",iPWG4JetChem);
283 printf(printMask,"PWG4 Jet tasks",iPWG4JetTasks);
284 printf(printMask,"PWG4 Jet Services",iPWG4JetServices);
285 printf(printMask,"PWG4 Jet Spectrum",iPWG4JetSpectrum);
286 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
287 printf(printMask,"PWG4 UE",iPWG4UE);
e0c120d9 288 printf(printMask,"PWG4 Leading UE",iPWG4LeadingUE);
9748e967 289 printf(printMask,"PWG4 Corrections UE",iPWG4CorrectionsUE);
290 printf(printMask,"PWG4 Pt QA MC",iPWG4PtQAMC);
7b90d977 291 printf(printMask,"PWG4 Pt QA track",iPWG4PtTrackQA);
9748e967 292 printf(printMask,"PWG4 Pt Spectra",iPWG4PtSpectra);
293 printf(printMask,"PWG4 Pt QA TPC",iPWG4PtQATPC);
294 printf(printMask,"PWG4 Cosmics",iPWG4Cosmics);
295 printf(printMask,"PWG4 Three Jets",iPWG4ThreeJets);
cc636095 296 printf(printMask,"PWG4 QGSep",iPWG4QGSep);
297 printf(printMask,"PWG4 Minijet",iPWG4Minijet);
9748e967 298 printf(printMask,"PWG4 KMeans",iPWG4KMeans);
299 printf(printMask,"PWG4 Cluster",iPWG4Cluster);
300 printf(printMask,"PWG4 Part Corr",iPWG4PartCorr);
301 printf(printMask,"PWG4 Calo QA",iPWG4CaloQA);
302 printf(printMask,"PWG4 Jet Corr",iPWG4JetCorr);
303 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
304 printf(printMask,"PWG4 Tagged",iPWG4Tagged);
305 printf(printMask,"PWG4 omega to 3 pi ",iPWG4omega3pi);
306 printf(printMask,"PWG4 Gamma Conv",iPWG4GammaConv);
17d96675 307 printf(printMask,"PWG4 Calo Conv",iPWG4CaloConv);
9748e967 308 printf(printMask,"HighPt FilterMask",kHighPtFilterMask);
3878a941 309
c38e3b95 310 //==========================================================================
311 // Connect to back-end system
312 if (!Connect(smode)) {
313 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
314 return;
315 }
316
317 // Load common libraries and set include path
318 if (!LoadCommonLibraries(smode)) {
319 ::Error("AnalysisTrain", "Could not load common libraries");
320 return;
321 }
3878a941 322
323
68216590 324
325
326
c38e3b95 327 // Make the analysis manager and connect event handlers
e84da0a5 328 AliAnalysisManager *mgr = new AliAnalysisManager("PWG4Train", "pwg4 mini train");
c38e3b95 329 if (kCommonOutputFileName.Length()>0)mgr->SetCommonFileName(kCommonOutputFileName.Data());
330 if (kProofSaveToAlien) mgr->SetSpecialOutputLocation(kProofOutdir);
4a6f59cb 331 mgr->SetNSysInfo(0);
c38e3b95 332 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
53c63663 333 if (kUseSysInfo)mgr->SetNSysInfo(kUseSysInfo);
9a5c5b1e 334 mgr->SetSkipTerminate(kSkipTerminate);
4a6f59cb 335
c38e3b95 336 // Load analysis specific libraries
337 if (!LoadAnalysisLibraries(smode)) {
338 ::Error("AnalysisTrain", "Could not load analysis libraries");
339 return;
340 }
341
9b2e70fd 342 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/ConfigLegoTrainPWGJE.C");
e5ee1c19 343 ConfigLegoTrainPWGJE(1008);
c38e3b95 344 // Create input handler (input container created automatically)
345 if (iAODanalysis) {
346 // AOD input handler
347 AliAODInputHandler *aodH = new AliAODInputHandler();
348 mgr->SetInputEventHandler(aodH);
78bc93b3 349 if (kDeltaAODJetNameInput.Length()){
350 Printf("Adding Friend %s",kDeltaAODJetNameInput.Data());
351 aodH->AddFriend(kDeltaAODJetNameInput.Data());
352 }
ffab794c 353 // if (iPWG4PartCorr) aodH->AddFriend(Form("deltas/%s"kDeltaAODJetName.Data()));
c38e3b95 354 } else {
355 // ESD input handler
356 AliESDInputHandler *esdHandler = new AliESDInputHandler();
357 if (kUseESDTags) esdHandler->SetReadTags();
c166d299 358 esdHandler->SetReadFriends(kFALSE);
c38e3b95 359 mgr->SetInputEventHandler(esdHandler);
4a6f59cb 360 // if(iPWG4PtQATPC&& !kTrainName.Contains("pass5"))esdHandler->SetActiveBranches("ESDfriend");
c166d299 361
c38e3b95 362 }
f4d11ac8 363
68216590 364
365
c38e3b95 366 // Monte Carlo handler
367 if (kUseMC && !iAODanalysis) {
368 AliMCEventHandler* mcHandler = new AliMCEventHandler();
369 mgr->SetMCtruthEventHandler(mcHandler);
370 mcHandler->SetReadTR(kUseTR);
371 }
372 // AOD output container, created automatically when setting an AOD handler
373 if (iAODhandler) {
374 // AOD output handler
375 AliAODHandler* aodHandler = new AliAODHandler();
376 aodHandler->SetOutputFileName("AliAOD.root");
6408fe42 377 aodHandler->SetFillAODforRun(kFillAOD);
121e4bd5 378 //
f4132e7d 379 mgr->SetOutputEventHandler(aodHandler);
c38e3b95 380 AliAnalysisDataContainer * cout_aod = mgr->GetCommonOutputContainer();
381 cout_aod->SetSpecialOutput();
382 }
383 // Debugging if needed
b03b08a3 384
3878a941 385 if (kUseDebug){
386 mgr->SetDebugLevel(3);
387 }
4721d8c5 388 if(kUseSysInfo>0){
389 mgr->RegisterExtraFile("syswatch.root");
390 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
391 kGridMergeExclude += "syswatch.root";
392 }
b03b08a3 393 else{
394 AliLog::SetGlobalLogLevel(AliLog::kError);
395 }
46534866 396
397
c38e3b95 398 //==========================================================================
399 // Create the chain. In this example it is created only from ALIEN files but
400 // can be done to work in batch or grid mode as well.
401 TChain *chain = CreateChain(smode, plugin_mode);
402
403 //==========================================================================
404 // Load the tasks configuration macros for all wagons. These files are supposed now to be
405 // in the current workdir, but in AliEn they will be in the file catalog,
406 // mapped from AliRoot and pecified in the jdl input list.
407
408 // For now connection to top input container and common AOD output container
409 // is done in this macro, but in future these containers will be connected
410 // from each task configuration macro.
cfd02305 411
412 //
413 // Tender and supplies. Needs to be called for every event.
414 //
f12de05f 415
cfd02305 416 if (useTender) {
6a637a06 417 gROOT->LoadMacro("$ALICE_ROOT/TENDER/TenderSupplies/AddTaskTender.C");
cfd02305 418 AliAnalysisTaskSE *tender = AddTaskTender(kTRUE);
419 // tender->SelectCollisionCandidates();
420 tender->SetDebugLevel(2);
421 }
422
34fc6450 423
424 Float_t fTrackEtaWindow = 0.9;
425 Float_t fJetEtaWindow = 0.5;
2926ddbb 426 Float_t fVertexWindow = 10;
7b90d977 427 /*
34fc6450 428 if(kIsPbPb){// for pass1
429 Float_t fTrackEtaWindow = 0.8;
430 Float_t fJetEtaWindow = 0.4;
431 }
7b90d977 432 */
cfd02305 433
d5e8640d 434
e84da0a5 435 if(iPhysicsSelection && !iAODanalysis){
63b6cbd0 436 gROOT->LoadMacro("$ALICE_ROOT/OADB/macros/AddTaskPhysicsSelection.C");
30f922ad 437 Int_t iTriggerHIC = 0;
39e7e8ab 438 Bool_t rejectBkg = true;
f4132e7d 439 if(kIsPbPb){
39e7e8ab 440 iTriggerHIC = 2;
441 rejectBkg = false; // for the moment...
442 }
45f12683 443 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kIsMC,true,rejectBkg);
d5e8640d 444
2926ddbb 445 // mgr->RegisterExtraFile("event_stat.root");
f12de05f 446 mgr->AddStatisticsTask();
e84da0a5 447 }
d5e8640d 448 else{
449 iPhysicsSelectionFlag = AliVEvent::kMB;
450 }
30f922ad 451
452 if(kIsPbPb&&!iAODanalysis){
f4132e7d 453
454 // has to run before AOD filter
1c06a186 455 gROOT->LoadMacro("$ALICE_ROOT/OADB/macros/AddTaskCentrality.C");
d8f21f85 456 AliCentralitySelectionTask *taskC = AddTaskCentrality();
f4132e7d 457 if (!taskC) ::Warning("AnalysisTrainPWG4Jets", "AliCentralitySelectionTask cannot run for this train conditions - EXCLUDED");
f4132e7d 458
30f922ad 459
460 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskEventplane.C");
461 AliEPSelectionTask *taskEP = AddTaskEventplane();
462 if (!taskEP) ::Warning("AnalysisTrainPWG4Jets", "AliEventplan cannot run for this train conditions - EXCLUDED");
463 }
464
c38e3b95 465 if (iESDfilter && !iAODanalysis) {
466 // ESD filter task configuration.
17f4943e 467 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskESDFilterPWGJETrain.C");
30f922ad 468 // switch on centrality make for PbPb
17f4943e 469 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilterPWGJETrain(kUseKinefilter); // carefull, if physics selection is enabled you may get not primary vertex pointer later on...
a7e27517 470 taskesdfilter->SetEnableFillAOD(!kFilterAOD);
c08c3ad2 471 taskesdfilter->DisableV0s();
472 taskesdfilter->DisableCascades();
473 taskesdfilter->DisableKinks();
474 taskesdfilter->DisablePmdClusters();
475 taskesdfilter->DisableCaloClusters();
476 taskesdfilter->DisableCells();
f4132e7d 477
4721d8c5 478 if(kIsMC){
479 mgr->RegisterExtraFile("pyxsec_hists.root");
480 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
481 kGridMergeExclude += "pyxsec_hists.root";
482
483 }
c38e3b95 484 }
485
486 // AOD tags
487 if (kUseAODTags) {
488 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
489 mgr->AddTask(tagTask);
490 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
491 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
492 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
493 mgr->ConnectOutput(tagTask, 1, coutTags);
494 }
bbb42949 495
36c36a0c 496 if (iPWG4FastEmbedding) {
9b2e70fd 497 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskFastEmbedding.C");
1a2bb6d5 498 AliAnalysisTaskFastEmbedding *taskEmbedding = 0;
499 if(kFastEmbAODList.Length()) taskEmbedding = AddTaskFastEmbedding(kFastEmbAODList, 1);
500 else taskEmbedding = AddTaskFastEmbedding(kFastEmbeddingAOD, 0);
a11972e9 501 taskEmbedding->SetJetBranch("jetsAOD_UA104_B0_Filter00256_Cut01000");
502 // taskEmbedding->SetEvtSelecMode(AliAnalysisTaskFastEmbedding::kEventsAll);
503 // taskEmbedding->SetDebugLevel(10);
36c36a0c 504 }
505
c38e3b95 506 // Jet analysis
507 if (iJETAN) {
9b2e70fd 508 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJets.C");
c38e3b95 509 AliAnalysisTaskJets *taskjets = 0;
070f06d2 510 if(iJETAN&1){
511 /*
512 taskjets = AddTaskJets(kHighPtFilterMask);
513 taskjets->SetName("StandardJets");
514 taskjets->SetNonStdBranch("");
515 */
516 }
b53f2e4f 517 if(iJETAN&2){
070f06d2 518 // Set only few jet finders backgroudn subtraction w an wo
519
d8f21f85 520 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
20b170eb 521 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
78bc93b3 522 TString cTmp("");
523 cTmp = taskjets->GetNonStdBranch();
524 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
525
526 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,2.,0); // no background subtraction
527 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
528 TString cTmp("");
529 cTmp = taskjets->GetNonStdBranch();
530 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
531
d8f21f85 532
533 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
f12de05f 534 if(kIsPbPb){
535 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
536 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
78bc93b3 537 cTmp = taskjets->GetNonStdBranch();
538 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
539 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,2.,2); // background subtraction
540 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
541 cTmp = taskjets->GetNonStdBranch();
542 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
f12de05f 543 }
d8f21f85 544
78bc93b3 545
d8f21f85 546
547 // SICONE
8dc333da 548 /*
d8f21f85 549 taskjets = AddTaskJets("AOD","SISCONE",0.4,kHighPtFilterMask,0.15,0); //no background subtraction to be done later....
550 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
4478beda 551 cTmp = taskjets->GetNonStdBranch();
552 if(cTmp.Length()>0)kJetSubtractBranches += Form("%s ",cTmp.Data());
78bc93b3 553 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
8dc333da 554 */
d8f21f85 555 if(kUseAODMC){
556 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
f12de05f 557 if(kIsPbPb){
558 taskjets = AddTaskJets("AODMC","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
78bc93b3 559 cTmp = taskjets->GetNonStdBranch();
560 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
f12de05f 561 taskjets = AddTaskJets("AODMC2","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
78bc93b3 562 cTmp = taskjets->GetNonStdBranch();
563 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
f12de05f 564 }
565 else{
566 taskjets = AddTaskJets("AODMC","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
78bc93b3 567 cTmp = taskjets->GetNonStdBranch();
568 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
f12de05f 569 taskjets = AddTaskJets("AODMC2","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
78bc93b3 570 cTmp = taskjets->GetNonStdBranch();
571 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
f12de05f 572 }
17d96675 573 }
d8f21f85 574 if(kDeltaAODJetName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJetName.Data());
b53f2e4f 575 }
c38e3b95 576 if (!taskjets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
577 }
578
d89b8229 579 // Jet analysis DEV
580 if (iJETANReader) {
9b2e70fd 581 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJetsReader.C");
d89b8229 582 AliAnalysisTaskJetsReader *taskjets = 0;
583
584 if(iJETANReader&1) {
585 AliAnalysisDataContainer* cont_jet1 = AddJetExchangeContainer("jets_1");
586 taskjets = AddTaskJetsReader(cont_jet1,kHighPtFilterMask);
587 }
588
589 if(iJETANReader&2) {
590 AliAnalysisDataContainer* cont_jet1 = AddJetExchangeContainer("jets_1");
591 taskjets = AddTaskJetsReader(cont_jet1,"AOD",kHighPtFilterMask,0.15);
592
593
594 AliAnalysisDataContainer* cont_jet2 = AddJetExchangeContainer("jets_2");
595 taskjets = AddTaskJetsReader(cont_jet2,"AOD", kHighPtFilterMask,1.);
596
597 }
598
599 taskjets->GetJetReader()->GetReaderHeader()->SetIsHighMult(kIsPbPb);
600
601
602 if ( !taskjets ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetsReader cannot run for this train conditions - EXCLUDED");
603
604 }
605
606 if (iJETANFinder && iJETANReader) {
9b2e70fd 607 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJetsFinder.C");
d89b8229 608 AliAnalysisTaskJetsFinder *taskjetsFinder = 0;
609
610 if(iJETANFinder&1) {
611 taskjetsFinder = AddTaskJetsFinder(cont_jet1);
612 }
613
614 if(iJETANFinder&2) {
615 taskjetsFinder = AddTaskJetsFinder(cont_jet1,"UA1",0.4,0); // UA1 no bkg subtraction (reader: jet_1)
616 taskjetsFinder = AddTaskJetsFinder(cont_jet1,"FASTJET",0.4,1); // FASTJET B1 (reader: jet_1)
617
618 taskjetsFinder = AddTaskJetsFinder(cont_jet2,"FASTJET",0.4,0); // FASTJET B0 (reader: jet_2)
619 }
620
621 if ( !taskjetsFinder || !taskjets ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetsFinder cannot run for this train conditions - EXCLUDED");
622
623 }
d8f21f85 624
36c36a0c 625 if (iPWG4FastEmbedding && iJETAN) {
1a2bb6d5 626 AliAnalysisTaskJets *taskEmbJets = AddTaskJets("AODextra", "FASTJET", 0.4, kHighPtFilterMask);
36c36a0c 627 taskEmbJets->ReadAODFromOutput();
1a2bb6d5 628 kJetSubtractBranches_extra += Form("%s ", taskEmbJets->GetNonStdBranch());
629
630 taskEmbJets = AddTaskJets("AODextraonly", "FASTJET", 0.4, kHighPtFilterMask);
631 taskEmbJets->ReadAODFromOutput();
632
633 taskEmbJets = AddTaskJets("AODextra", "UA1", 0.4, kHighPtFilterMask,1.,0);
634 taskEmbJets->ReadAODFromOutput();
635 taskEmbJets = AddTaskJets("AODextraonly", "UA1", 0.4, kHighPtFilterMask,1.,0);
636 taskEmbJets->ReadAODFromOutput();
637 taskEmbJets = AddTaskJets("AODextra", "UA1", 0.4, kHighPtFilterMask,1.,2);
36c36a0c 638 taskEmbJets->ReadAODFromOutput();
639 }
640
bd80a748 641 if(iPWG4Cluster){
9b2e70fd 642 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJetCluster.C");
bd80a748 643 AliAnalysisTaskJetCluster *taskCl = 0;
ffab794c 644 Float_t fCenUp = 0;
645 Float_t fCenLo = 0;
1c79997e 646 if(kIsPbPb&&!kIsMC){
ffab794c 647 fCenLo = 0;
648 fCenUp = 80;
649 }
bd80a748 650 if(iPWG4Cluster&1){
f12de05f 651
f4132e7d 652 if(kIsPbPb){
2926ddbb 653 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow,0); // this one is for the background and random jets, random cones with no skip
070f06d2 654 taskCl->SetBackgroundCalc(kTRUE);
c22feddd 655 taskCl->SetNRandomCones(1);
656 // taskCl->SetDebugLevel(11);
070f06d2 657 taskCl->SetCentralityCut(fCenLo,fCenUp);
c27b1463 658
659 taskCl->SetJetTypes(1<<0|1<<2|1<<3);
d8f21f85 660 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
78bc93b3 661 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
662 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),0)));
663 kJetListSpectrum.Add(new TObjString(Form("%sRandomCone_random",taskCl->GetJetOutputBranch())));
c27b1463 664
8dc333da 665 kJetSubtractBranches += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomConeSkip00");
666 kJetSubtractBranches += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomCone_random");
c08c3ad2 667
2926ddbb 668 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),1.0,fTrackEtaWindow,fVertexWindow,0); // this one is for the background and random jets, random cones with no skip
c22feddd 669 taskCl->SetNRandomCones(1);
c08c3ad2 670 taskCl->SetBackgroundCalc(kTRUE);
671 taskCl->SetCentralityCut(fCenLo,fCenUp);
d5e8640d 672 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
c27b1463 673
674 taskCl->SetJetTypes(1<<0|1<<2|1<<3);
c08c3ad2 675 kDefaultJetBackgroundBranchCut1 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
8dc333da 676 kJetSubtractBranchesCut1 += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomConeSkip00");
677 kJetSubtractBranchesCut1 += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomCone_random");
78bc93b3 678 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
679 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),0)));
680 kJetListSpectrum.Add(new TObjString(Form("%sRandomCone_random",taskCl->GetJetOutputBranch())));
c08c3ad2 681
2926ddbb 682 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),2.0,fTrackEtaWindow,fVertexWindow,0); // this one is for the background and random jets, random cones with no skip
2eded560 683 taskCl->SetNRandomCones(1);
684 taskCl->SetBackgroundCalc(kTRUE);
685 taskCl->SetCentralityCut(fCenLo,fCenUp);
2eded560 686 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
c27b1463 687
688 taskCl->SetJetTypes(1<<0|1<<2|1<<3);
2eded560 689 kDefaultJetBackgroundBranchCut2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
690 kJetSubtractBranchesCut2 += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomConeSkip00");
691 kJetSubtractBranchesCut2 += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomCone_random");
692 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
693 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),0)));
694 kJetListSpectrum.Add(new TObjString(Form("%sRandomCone_random",taskCl->GetJetOutputBranch())));
695
696
a1d44e31 697 if (iPWG4FastEmbedding) {
1a2bb6d5 698 AliAnalysisTaskJetCluster *taskClEmb = 0;
2926ddbb 699 taskClEmb = AddTaskJetCluster("AODextra","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // this one is for the background and random jets
1a2bb6d5 700 taskClEmb->SetBackgroundCalc(kTRUE);
a1d44e31 701 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
d5e8640d 702 if(iAODanalysis==2)taskClEmb->SetAODTrackInput(kTRUE);
1a2bb6d5 703 kDefaultJetBackgroundBranch_extra = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskClEmb->GetJetOutputBranch());
a1d44e31 704
2926ddbb 705 taskClEmb = AddTaskJetCluster("AODextraonly","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // this one is for the background and random jets
a1d44e31 706 taskClEmb->SetBackgroundCalc(kFALSE);
707 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
d5e8640d 708 if(iAODanalysis==2)taskClEmb->SetAODTrackInput(kTRUE);
709
2926ddbb 710 taskClEmb = AddTaskJetCluster("AODextra","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow);
1a2bb6d5 711 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
712 taskClEmb->SetBackgroundBranch(kDefaultJetBackgroundBranch_extra.Data());
713 kJetSubtractBranches_extra += Form("%s ",taskClEmb->GetJetOutputBranch());
d5e8640d 714 if(iAODanalysis==2)taskClEmb->SetAODTrackInput(kTRUE);
1a2bb6d5 715
2926ddbb 716 taskClEmb = AddTaskJetCluster("AODextraonly","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow);
1a2bb6d5 717 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
d5e8640d 718 if(iAODanalysis==2)taskClEmb->SetAODTrackInput(kTRUE);
a1d44e31 719 }
720
2926ddbb 721 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.2,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow,0); // this one is for the background and random jets
c27b1463 722 taskCl->SetNRandomCones(1);
f4132e7d 723 taskCl->SetBackgroundCalc(kTRUE);
ffab794c 724 taskCl->SetCentralityCut(fCenLo,fCenUp);
c27b1463 725 taskCl->SetJetTypes(1<<0|1<<2|1<<3);
78bc93b3 726 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
c27b1463 727 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),0)));
728 kJetListSpectrum.Add(new TObjString(Form("%sRandomCone_random",taskCl->GetJetOutputBranch())));
729
730
731
d5e8640d 732 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
f4132e7d 733 }
734 else{
2926ddbb 735 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // this one is for the background jets
f4132e7d 736 taskCl->SetBackgroundCalc(kTRUE);
d8f21f85 737 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
d5e8640d 738 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
78bc93b3 739 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
f12de05f 740
2926ddbb 741 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow);
f12de05f 742 taskCl->SetBackgroundCalc(kTRUE);
d5e8640d 743 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
78bc93b3 744 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
d8f21f85 745 }
4478beda 746
2926ddbb 747 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // thid id sldo got the random cones but avoiding the two leading jets
ffab794c 748 taskCl->SetCentralityCut(fCenLo,fCenUp);
f12de05f 749 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
c27b1463 750 taskCl->SetNRandomCones(1);
21df3cc7 751 if(iFilterAnalysis==2){
30f922ad 752 taskCl->SetJetTriggerPtCut(kJetTriggerPtCut);
21df3cc7 753 }
d5e8640d 754 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
c27b1463 755
756 taskCl->SetJetTypes(1<<0|1<<2); // only store the RC on full event with 2 removed
d8f21f85 757 kDefaultJetBranch = taskCl->GetJetOutputBranch();
a7e27517 758 kJetSubtractBranches += Form("%s ",taskCl->GetJetOutputBranch());
c27b1463 759 // kJetSubtractBranches += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomConeSkip02");
760 // kJetSubtractBranches += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomCone_random");
78bc93b3 761 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
762 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),2)));
c27b1463 763 // kJetListSpectrum.Add(new TObjString(Form("%sRandomCone_random",taskCl->GetJetOutputBranch())));
3095177c 764
2926ddbb 765 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),1.0,fTrackEtaWindow,fVertexWindow);
c27b1463 766 taskCl->SetNRandomCones(1);
c08c3ad2 767 taskCl->SetCentralityCut(fCenLo,fCenUp);
0ed30c7f 768 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
c08c3ad2 769 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchCut1.Data());
c27b1463 770
771 taskCl->SetJetTypes(1<<0|1<<2); // only store the RC on full event with 2 removed
c08c3ad2 772 kJetSubtractBranchesCut1 += Form("%s ",taskCl->GetJetOutputBranch());
0ed30c7f 773 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
c27b1463 774 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),2)));
2a7c86bc 775
2eded560 776
2926ddbb 777 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),2.0,fTrackEtaWindow,fVertexWindow);
2eded560 778 taskCl->SetCentralityCut(fCenLo,fCenUp);
c27b1463 779 taskCl->SetNRandomCones(1);
2eded560 780 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
781 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchCut2.Data());
c27b1463 782 taskCl->SetJetTypes(1<<0|1<<2); // only store the RC on full event with 2 removed
2eded560 783 kJetSubtractBranchesCut2 += Form("%s ",taskCl->GetJetOutputBranch());
784 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
c27b1463 785 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),2)));
2eded560 786
2a7c86bc 787 // tmp track qa...
2eded560 788 /*
21df3cc7 789 taskCl = AddTaskJetCluster("AOD","",1<<8,iPhysicsSelectionFlag,"ANTIKT",0.4,2,1,kDeltaAODJetName.Data(),2.0);
2a7c86bc 790 taskCl->SetCentralityCut(fCenLo,fCenUp);
791 taskCl->SetFilterMask(1<<4|1<<8,1);
2eded560 792 */
2926ddbb 793 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.2,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow,2);
070f06d2 794 taskCl->SetCentralityCut(fCenLo,fCenUp);
c27b1463 795 taskCl->SetNRandomCones(1);
d5e8640d 796 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
f12de05f 797 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
c27b1463 798
799 taskCl->SetJetTypes(1<<0|1<<2);
a7e27517 800 kJetSubtractBranches += Form("%s ",taskCl->GetJetOutputBranch());
c27b1463 801 // kJetSubtractBranches += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomConeSkip00");
802 // kJetSubtractBranches += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomCone_random");
0ed30c7f 803 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
c27b1463 804 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),2)));
805
3095177c 806
d4e8abc5 807 if(kUseAODMC){
1c79997e 808 if(kIsPbPb){
2926ddbb 809 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // this one is for the background and random jets
d8f21f85 810 taskCl->SetBackgroundCalc(kTRUE);
d8f21f85 811 kDefaultJetBackgroundBranchMC = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
d5e8640d 812 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
78bc93b3 813 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
d5e8640d 814
2926ddbb 815 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fVertexWindow,fVertexWindow); // this one is for the background and random jets
d8f21f85 816 taskCl->SetBackgroundCalc(kTRUE);
2926ddbb 817 kDefaultJetBackgroundBranchMC2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
d5e8640d 818 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
78bc93b3 819 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
1c79997e 820 }
821 else{
2926ddbb 822 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // this one is for the background and random jets
f12de05f 823 taskCl->SetBackgroundCalc(kTRUE);
f12de05f 824 kDefaultJetBackgroundBranchMC = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
78bc93b3 825 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
826
2926ddbb 827 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // this one is for the background and random jets
f12de05f 828 taskCl->SetBackgroundCalc(kTRUE);
f12de05f 829 kDefaultJetBackgroundBranchMC2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
78bc93b3 830 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
831 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
d8f21f85 832 // pp background calcs...
833 }
834
2926ddbb 835 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow);
f12de05f 836 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC.Data());
d8f21f85 837 kDefaultJetBranchMC = taskCl->GetJetOutputBranch();
d5e8640d 838 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
78bc93b3 839 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
1c79997e 840
2926ddbb 841 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow);
f12de05f 842 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC2.Data());
d8f21f85 843 kDefaultJetBranchMC2 = taskCl->GetJetOutputBranch();
d5e8640d 844 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
78bc93b3 845 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
d4e8abc5 846 }
d8f21f85 847
848
bd80a748 849 if (!taskCl) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCluster cannot run for this train conditions - EXCLUDED");
850 }
bd80a748 851 }
852
f12de05f 853
3095177c 854 if(iJETSUBTRACT&&kJetSubtractBranches.Length()){
9b2e70fd 855 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJetBackgroundSubtract.C");
37eb26ea 856 AliAnalysisTaskJetBackgroundSubtract *taskSubtract = 0;
857 if(kJetSubtractBranches.Length()){
a31b8a87 858
f12de05f 859
78bc93b3 860
861
0ed30c7f 862 for(int iB = 1;iB<3;iB++){
78bc93b3 863 if(iB>2)continue;
864 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches,iB,kJetSubtractMask1.Data(),kJetSubtractMask2.Data());
865 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data()); taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
866 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
c27b1463 867 taskSubtract->SetKeepJets(kTRUE);
78bc93b3 868 TString cTmp;
869 TObjArray *objArr = kJetSubtractBranches.Tokenize(" ");
870 for(int iJB = 0;iJB<objArr->GetEntries();iJB++){
871 TObjString *ostr = (TObjString*)objArr->At(iJB);
872 cTmp = ostr->GetString().Data();
873 cTmp.ReplaceAll(kJetSubtractMask1.Data(),Form(kJetSubtractMask2.Data(),iB));
874 kJetListSpectrum.Add(new TObjString(cTmp.Data()));
875 }
876
877 // taskSubtract->SetDebugLevel(3);
878 if(iB==2){
879 if(kJetSubtractBranches.Contains(kDefaultJetBranch.Data())&&kIsPbPb){
880 kDefaultJetBranch.ReplaceAll(taskSubtract->GetToReplace(),Form(taskSubtract->GetReplacementMask(),taskSubtract->GetSubtractionMethod()));
881 }
882 }
883
37eb26ea 884 }
c08c3ad2 885
78bc93b3 886 //
c08c3ad2 887 // cut1
78bc93b3 888 Int_t iB = 2;
2eded560 889 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranchesCut1,iB,kJetSubtractMask1.Data(),kJetSubtractMask2.Data(),"Cut1000");
c08c3ad2 890 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranchCut1.Data());
891 taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
892 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
78bc93b3 893
894 objArr = kJetSubtractBranchesCut1.Tokenize(" ");
895 for(int iJB = 0;iJB<objArr->GetEntries();iJB++){
896 TObjString *ostr = (TObjString*)objArr->At(iJB);
897 cTmp = ostr->GetString().Data();
898 cTmp.ReplaceAll(kJetSubtractMask1.Data(),Form(kJetSubtractMask2.Data(),iB));
899 kJetListSpectrum.Add(new TObjString(cTmp.Data()));
900 }
901
2eded560 902 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranchesCut2,iB,kJetSubtractMask1.Data(),kJetSubtractMask2.Data(),"Cut2000");
903 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranchCut2.Data());
904 taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
905 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
906
907 objArr = kJetSubtractBranchesCut2.Tokenize(" ");
908 for(int iJB = 0;iJB<objArr->GetEntries();iJB++){
909 TObjString *ostr = (TObjString*)objArr->At(iJB);
910 cTmp = ostr->GetString().Data();
911 cTmp.ReplaceAll(kJetSubtractMask1.Data(),Form(kJetSubtractMask2.Data(),iB));
912 kJetListSpectrum.Add(new TObjString(cTmp.Data()));
913 }
78bc93b3 914
37eb26ea 915 }
916 if(kJetSubtractBranches_extra.Length()){
78bc93b3 917 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches_extra,2,kJetSubtractMask1.Data(),kJetSubtractMask2.Data(),"extra");
37eb26ea 918 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch_extra.Data());
919 taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
920 //taskSubtract->SetDebugLevel(3);
921 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
922 if(kJetSubtractBranches_extra.Contains(kDefaultJetBranch.Data())){
923 kDefaultJetBranch.ReplaceAll(taskSubtract->GetToReplace(),Form(taskSubtract->GetReplacementMask(),taskSubtract->GetSubtractionMethod()));
924 }
925 }
926 if (!taskSubtract) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetBackgroundSubtrac cannot run for this train conditions - EXCLUDED");
a7e27517 927 }
928
c38e3b95 929 if (iDIJETAN) {
9b2e70fd 930 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskDiJets.C");
c38e3b95 931 AliAnalysisTaskDiJets *taskdijets = 0;
82ebd295 932 if(iDIJETAN&1)taskdijets = AddTaskDiJets();
c38e3b95 933 if (!taskdijets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
82ebd295 934 if(iDIJETAN&2){
935 taskdijets = AddTaskDiJets("jetsAOD_CDF07");
936 taskdijets = AddTaskDiJets("jetsAOD_DA07");
937 taskdijets = AddTaskDiJets("jetsAOD_FASTJET07");
938 taskdijets = AddTaskDiJets("jetsAOD_FASTKT07");
939 taskdijets = AddTaskDiJets("jetsAOD_SISCONE07");
940 taskdijets = AddTaskDiJets("jetsAOD_UA107");
941 }
c38e3b95 942 }
943
2bfe5463 944 if(iPWGPPQASym){
945 gROOT->LoadMacro("$ALICE_ROOT/PWGPP/PilotTrain/AddTaskQAsym.C");
c38e3b95 946 AliAnalysisTaskQASym *taskQASym = AddTaskQAsym(-1);
947 if (!taskQASym) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQASym cannot run for this train conditions - EXCLUDED");
121e4bd5 948 }
c38e3b95 949
121e4bd5 950
951
952 if(iPWG4TmpSourceSara){
9b2e70fd 953 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskEta.C");
121e4bd5 954 AliAnalysisTaskEta *taskEta = AddTaskEta();
955 if (!taskEta) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskEta cannot run for this train conditions - EXCLUDED");
c38e3b95 956 }
957
c580ebbb 958
c38e3b95 959 if(iPWG4JetServices){
9b2e70fd 960 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJetServices.C");
c38e3b95 961 AliAnalysisTaskJetServices *taskjetServ = 0;
17f4943e 962 taskjetServ = AddTaskJetServices();
c38e3b95 963 if (!taskjetServ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetServices cannot run for this train conditions - EXCLUDED");
53c63663 964 if(kGridRunRange[0]>0)taskjetServ->SetRunRange(kGridRunRange[0],kGridRunRange[1]);
27cdf9c4 965 else taskjetServ->SetRunRange(110000,160000);
966 taskjetServ->SetMCData(kIsMC);
dc6a7461 967 taskjetServ->SetUsePhysicsSelection((Bool_t)iPhysicsSelection);
39e7e8ab 968 taskjetServ->SetPhysicsSelectionFlag(iPhysicsSelectionFlag); //
f4132e7d 969 taskjetServ->SetNonStdFile(kDeltaAODJetName.Data());
c22feddd 970 taskjetServ->SetTrackEtaWindow(fTrackEtaWindow);
75bf77e3 971 taskjetServ->SetZVertexCut(fVertexWindow);
c22feddd 972 taskjetServ->SetFilterMask(kHighPtFilterMask);
2926ddbb 973
e5ee1c19 974 taskjetServ->SetDebugLevel(10);
975
976
21df3cc7 977 if(kIsPbPb)taskjetServ->SetCollisionType(AliAnalysisTaskJetServices::kPbPb);
978 else taskjetServ->SetCollisionType(AliAnalysisTaskJetServices::kPP);
f4132e7d 979 if(kIsPbPb){
bbb42949 980 if(kDeltaAODJetName.Length()>0&&kFilterAOD)taskjetServ->SetFilterAODCollisions(kTRUE);
981 // else if(iAODanalysis)taskjetServ->SetFilterAODCollisions(kTRUE);
f4132e7d 982 }
ffab794c 983 if(iAODanalysis){
7b90d977 984 //
ffab794c 985 taskjetServ->SetAODInput(kTRUE);
986 }
c38e3b95 987 }
988
c08c3ad2 989 if(iPWG4JetSpectrum){
9b2e70fd 990 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJetSpectrum2.C");
c38e3b95 991 AliAnalysisTaskJetSpectrum2 *taskjetSpectrum = 0;
ba584432 992 TString bkgClusters = kDefaultJetBackgroundBranch.Data();
993 bkgClusters.ReplaceAll(Form("%s_",AliAODJetEventBackground::StdBranchName()),"");
78bc93b3 994 Printf("############# Possible jet branches ###################");
995 for(int iJF = 0;iJF < kJetListSpectrum.GetSize();iJF++){
996 TObjString *objStr = (TObjString*)kJetListSpectrum.At(iJF);
997 Printf("%3d: %s",iJF+1,objStr->GetString().Data());
998 }
c22feddd 999
c27b1463 1000 // Printf("Type q to exit");if(getchar()=='q')return;
6bd3fdae 1001 if(iPWG4JetSpectrum&1){
f4132e7d 1002 if(kIsPbPb){
78bc93b3 1003 for(int iJF = 0;iJF < kJetListSpectrum.GetSize();iJF++){
1004 Long64_t value = kJetMapSpectrum(iJF+1);
1005 Printf("iJF: %d value: %d", iJF+1,(Int_t)value);
1006 if(value==0)continue;
1007 TObjString *objStr = (TObjString*)kJetListSpectrum.At(iJF);
1008 TString bName1 = objStr->GetString().Data();
1009 TString bName2[3];
1010
1011 TObjString *objStrBkg = (TObjString*)kJetListSpectrum.At(iJF);
1012 TString bBkgName1("");
1013 TString bBkgName2[3];
1014
1015 Long64_t valueBkg1 = kJetBackMapSpectrum(iJF+1);
1016 if(valueBkg1>0){
1017 TObjString *objStrBkg = (TObjString*)kJetListSpectrum.At(valueBkg1-1);
1018 bBkgName1 = objStrBkg->GetString().Data();
c08c3ad2 1019 }
8dc333da 1020 Int_t iPartner = 0;
78bc93b3 1021 if(value>0){
1022 Int_t iJF2 = -1;
1023 for(int i = 0;i<3;i++){
1024 iJF2 = value/kJetMapOffset[i]-1;
1025 value = value%kJetMapOffset[i];
1026 Printf("%d %d", iJF2+1,(Int_t)value);
1027 if(iJF2>=0&&iJF2<kJetListSpectrum.GetSize()){
1028 TObjString *objStr2 = (TObjString*)kJetListSpectrum.At(iJF2);
8dc333da 1029 bName2[iPartner] = objStr2->GetString().Data();
78bc93b3 1030 Long64_t valueBkg2 = kJetBackMapSpectrum(iJF2+1);
1031 if(valueBkg2>0){
1032 TObjString *objStrBkg2 = (TObjString*)kJetListSpectrum.At(valueBkg2-1);
8dc333da 1033 bBkgName2[iPartner] = objStrBkg2->GetString().Data();
78bc93b3 1034 }
8dc333da 1035 iPartner++;
78bc93b3 1036 }
1037 }
c08c3ad2 1038 }
78bc93b3 1039
1040
1041 // loop over all centralities
1042 for(int ic = 0;ic<5;ic++){
8dc333da 1043 if(ic!=0)continue;
78bc93b3 1044 Bool_t bDone = kFALSE;
8dc333da 1045 for(int i = 0;i<TMath::Max(iPartner,1);i++){
78bc93b3 1046 if(bName2[i].Length()){
1047 taskjetSpectrum = AddTaskJetSpectrum2(bName1.Data(),bName2[i].Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,ic);
1048 bDone = kTRUE;
1049 }
1050 else{
1051 if(!bDone){
1052 taskjetSpectrum = AddTaskJetSpectrum2(bName1.Data(),bName2[i].Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,ic);
1053 bDone = kTRUE;
1054 }
1055 else{
1056 continue;
1057 }
1058 }
8dc333da 1059 Printf("%s/%s %s/%s",bName1.Data(),bBkgName1.Data(),bName2[i].Data(),bBkgName2[i].Data());
1060
78bc93b3 1061 // setting all the other things...
1062 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
1063 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
8dc333da 1064
1065 // negative values do not fill the track histos
1066 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetGenFull,-1);
1067 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetGen,-1);
1068 if(!bName1.Contains("ANTIKT")||bName1.Contains("Cone")){
1069 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetRecFull,-1);
1070 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetRec,-1);
78bc93b3 1071 }
8dc333da 1072
1073
78bc93b3 1074 if(bName2[i].Length()==0){
1075 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetGenFull,0);
1076 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetGen,0);
1077 }
1078 if(iAODanalysis==1){
1079 taskjetSpectrum->SetAODJetInput(kTRUE);
1080 taskjetSpectrum->SetAODTrackInput(kTRUE);
1081 }
1082 else if (iAODanalysis==2){
1083 taskjetSpectrum->SetAODTrackInput(kTRUE);
1084 taskjetSpectrum->SetAODJetInput(kFALSE);
1085 }
1086 // taskjetSpectrum->SetDebugLevel(11);
1087 taskjetSpectrum->SetBranchBkgRec(bBkgName1.Data());
1088 taskjetSpectrum->SetBranchBkgGen(bBkgName2[i].Data());
1089 }
c08c3ad2 1090 }
a31b8a87 1091 }
f4132e7d 1092 }
f12de05f 1093 else{ // ! PbPb
1094 Int_t i = 0;
3095177c 1095
1096 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),
1097 "",kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
f12de05f 1098
1099
3095177c 1100
1101 if(kDefaultJetBranchMC.Length()){
1102 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),
1103 kDefaultJetBranchMC.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
1104 // taskjetSpectrum->SetMinJetPt(10);
1105 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
1106 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
1107 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
1108 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
1109 if(iAODanalysis)SetAODInput(taskjetSpectrum);
1110 }
1111 if(kDefaultJetBranchMC2.Length()){
1112 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),
1113 kDefaultJetBranchMC2.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
1114 // taskjetSpectrum->SetMinJetPt(10);
1115 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
1116 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
1117 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
1118 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
1119 if(iAODanalysis)SetAODInput(taskjetSpectrum);
1120 }
1121
ba584432 1122 /*
f12de05f 1123 TString tmp2(kDefaultJetBranch.Data());
1124 tmp2.ReplaceAll(Form(kJetSubtractMask2.Data(),0),Form(kJetSubtractMask2.Data(),2));
3095177c 1125 taskjetSpectrum = AddTaskJetSpectrum2(tmp2.Data(),kDefaultJetBranch.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
f12de05f 1126 // taskjetSpectrum->SetDebugLevel(3);
1127 // taskjetSpectrum->SetMinJetPt(10);
37eb26ea 1128 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
1129 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
ba584432 1130 taskjetSpectrum->SetTrackEtaWindow(0.8);
f12de05f 1131 taskjetSpectrum->SetJetEtaWindow(0.4);
1132
1133 // check the old subtracted vs. the new subtracted
1134 TString tmp3(kDefaultJetBranch.Data());
1135 tmp3.ReplaceAll(Form(kJetSubtractMask2.Data(),0),Form(kJetSubtractMask2.Data(),3));
3095177c 1136 taskjetSpectrum = AddTaskJetSpectrum2(tmp3.Data(),kDefaultJetBranch.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
f12de05f 1137 // taskjetSpectrum->SetDebugLevel(3);
1138 // taskjetSpectrum->SetMinJetPt(10);
37eb26ea 1139 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
1140 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
f12de05f 1141 taskjetSpectrum->SetTrackEtaWindow(0.8);
1142 taskjetSpectrum->SetJetEtaWindow(0.4);
1143 if(iAODanalysis)SetAODInput(taskjetSpectrum);
ba584432 1144 */
f12de05f 1145 }
d8f21f85 1146 if (!taskjetSpectrum) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetSpectrum2 cannot run for this train conditions - EXCLUDED");
e6993a52 1147 }
d8f21f85 1148 }
3170a3f8 1149 AliAnalysisManager::SetCommonFileName("PWG4_Fragmentation.root");
d8f21f85 1150 if(iPWG4Fragmentation){
9b2e70fd 1151 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskFragmentationFunction.C");
d8f21f85 1152 AliAnalysisTaskFragmentationFunction *taskFrag = 0;
7b90d977 1153 if(kUseAODMC){
d8f21f85 1154
7b90d977 1155 }
1156 else{
d5e8640d 1157
d5e8640d 1158
78bc93b3 1159 for(int ic = 1;ic < 5;ic++){
1160 // Anti-kT
1161 taskFrag = AddTaskFragmentationFunction(1<<23,kHighPtFilterMask, ic);
1162 if(kDeltaAODJetName.Length()>0)taskFrag->SetNonStdFile(kDeltaAODJetName.Data());
1163 if(iAODanalysis==2)taskFrag->UseAODInputJets(kFALSE);
d5e8640d 1164
78bc93b3 1165 // UA1
1166 taskFrag = AddTaskFragmentationFunction(1<<0,kHighPtFilterMask, ic);
1167 if(kDeltaAODJetName.Length()>0)taskFrag->SetNonStdFile(kDeltaAODJetName.Data());
1168 if(iAODanalysis==2)taskFrag->UseAODInputJets(kFALSE);
b101fa2e 1169
1170 // SISCONE
78bc93b3 1171 if(ic==1){
1172 /*
1173 taskFrag = AddTaskFragmentationFunction(1<<28,kHighPtFilterMask, ic);
1174 taskFrag = AddTaskFragmentationFunction(1<<29,kHighPtFilterMask, ic);
1175 taskFrag = AddTaskFragmentationFunction(1<<30,kHighPtFilterMask, ic);
1176 */
1177
1178
1179
1180 // Anti-kT B2 - B3
1181 if(!iAODanalysis==1){
1182 taskFrag = AddTaskFragmentationFunction(1<<26,kHighPtFilterMask, ic);
1183 if(kDeltaAODJetName.Length()>0)taskFrag->SetNonStdFile(kDeltaAODJetName.Data());
1184 if(iAODanalysis==2)taskFrag->UseAODInputJets(kFALSE);
1185
1186 taskFrag = AddTaskFragmentationFunction(1<<27,kHighPtFilterMask, ic);
1187 if(kDeltaAODJetName.Length()>0)taskFrag->SetNonStdFile(kDeltaAODJetName.Data());
1188 if(iAODanalysis==2)taskFrag->UseAODInputJets(kFALSE);
1189 }
1190 }
d5e8640d 1191
78bc93b3 1192 }
d5e8640d 1193
3170a3f8 1194
7b90d977 1195 }
1196 if (!taskFrag) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskFragmentationFunction cannot run for this train conditions - EXCLUDED");
d8f21f85 1197 }
1198
1199 if(iPWG4JetChem){
9b2e70fd 1200 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJetChem.C");
d8f21f85 1201 AliAnalysisTask *taskChem = AddTaskJetChem(kHighPtFilterMask);
1202 if (!taskChem) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetChem cannot run for this train conditions - EXCLUDED");
c38e3b95 1203 }
6bd3fdae 1204
bbb42949 1205 if (iPWG4JetResponse) {
9b2e70fd 1206 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJetResponse.C");
1a2bb6d5 1207 AliAnalysisTask *taskJetResponse = 0;
1208
1209 if(iJETAN){
1210 taskJetResponse = AddTaskJetResponse("jets", "FASTJET", 0.4, kHighPtFilterMask, 0.15, 0);
1211 taskJetResponse = AddTaskJetResponse("jets", "FASTJET", 0.4, kHighPtFilterMask, 0.15, 1);
1212
1213 taskJetResponse = AddTaskJetResponse("jets", "UA1", 0.4, kHighPtFilterMask, 1., 0);
1214 taskJetResponse = AddTaskJetResponse("jets", "UA1", 0.4, kHighPtFilterMask, 1., 2);
1215 }
1216 if(iPWG4Cluster){
1217 taskJetResponse = AddTaskJetResponse("clusters", "ANTIKT", 0.4, kHighPtFilterMask, 0.15, 0);
1218 taskJetResponse = AddTaskJetResponse("clusters", "ANTIKT", 0.4, kHighPtFilterMask, 0.15, 1);
1219 }
1220 if (!taskJetResponse) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetResponse cannot run for this train conditions - EXCLUDED");
1221
bbb42949 1222 }
6bd3fdae 1223
58ef946c 1224 if(iPWG4JCORRAN){
9b2e70fd 1225 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJCORRANTask.C");
4721d8c5 1226 AliJCORRANTask* corran = AddTaskJCORRAN(kDeltaAODJCORRANName.Data(),0);
58ef946c 1227 if(!corran)::Warning("AnalysisTrainPWG4Jets", "AliJCORRANTask cannot run for this train conditions - EXCLUDED");
4721d8c5 1228 else{
1229 if(kDeltaAODJCORRANName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJCORRANName.Data());
1230 }
58ef946c 1231 }
1232
c38e3b95 1233 if(iPWG4UE){
9b2e70fd 1234 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskUE.C");
c38e3b95 1235 AliAnalysisTaskUE *taskUE = 0;
1236 if(iPWG4UE&1)taskUE = AddTaskUE();
1237 if(iPWG4UE&2){
94ee88d4 1238 taskUE =AddTaskUE("jetsAOD_CDF04","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
17d96675 1239 // taskUE =AddTaskUE("jetsAOD_CDF07","CDF", "LJ", "TRANSV","MSP");
94ee88d4 1240 taskUE =AddTaskUE("jetsAOD_SISCONE04","CDF", "LJ", "TRANSV","MSP");
17d96675 1241 // taskUE =AddTaskUE("jetsAOD_SISCONE07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
94ee88d4 1242 taskUE =AddTaskUE("jetsAOD_ICDF","CDF","LJ","TRANSV","MSP");
1243 taskUE =AddTaskUE("jetsAOD_FASTKT04","CDF", "LJ", "TRANSV","MSP");
17d96675 1244 // taskUE =AddTaskUE("jetsAOD_FASTKT07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
58ef946c 1245 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta05", "TRANSV","MSP");
1246 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta09", "TRANSV","MSP");
c38e3b95 1247 }
2bb1f4ca 1248
c38e3b95 1249 if (!taskUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskUE cannot run for this train conditions - EXCLUDED");
1250 }
e0c120d9 1251
1252 if(iPWG4LeadingUE){
9b2e70fd 1253 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskLeadingTrackUE.C");
e0c120d9 1254 AliAnalysisTaskLeadingTrackUE *taskLeadingUE = AddTaskLeadingTrackUE(kUseMC);
1255 if (!taskLeadingUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTasLeadingTrackkUE cannot run for this train conditions - EXCLUDED");
27cdf9c4 1256 // taskLeadingUE->SetFilterBit(64);
e0c120d9 1257 }
1258
1259
9748e967 1260 if(iPWG4CorrectionsUE){
9b2e70fd 1261 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskCorrectionsUE.C");
9748e967 1262 AliAnalysisTaskCorrectionsUE *taskCorrectionsUE = 0;
1263 if(iPWG4CorrectionsUE&1)taskCorrectionsUE = AddTaskCorrectionsUE("jetsAOD_NONE","CDF","MP_eta05","TRANSV","MSP",kFALSE);
1264 if (!taskCorrectionsUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCorrectionsUE cannot run for this train conditions - EXCLUDED");
1265 }
c38e3b95 1266
1267 if(iPWG4ThreeJets){
9b2e70fd 1268 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskThreeJets.C");
c38e3b95 1269 AliAnalysisTaskThreeJets *taskThree = AddTaskThreeJets();
1270 if(!taskThree)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskThreets cannot run for this train conditions - EXCLUDED");
1271 }
cc636095 1272 if(iPWG4QGSep){
9b2e70fd 1273 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskQGSep.C");
cc636095 1274 AliAnalysisTaskQGSep *taskQGSep = AddTaskQGSep(kUseMC,iAODanalysis);
1275 if(!taskQGSep)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQGSep cannot run for this train conditions - EXCLUDED");
1276 }
1277
1278
1279 if(iPWG4Minijet){
9b2e70fd 1280 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskMinijet.C");
4d16db9c 1281 AliAnalysisTaskMinijet *taskMini = AddTaskMinijet(-1,"esd",kUseMC,kGridDataSet);
cc636095 1282 // if we ha highmult trigger add another task
1283 if(!taskMini)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskMinjet cannot run for this train conditions - EXCLUDED");
1284 }
1285
3170a3f8 1286 AliAnalysisManager::SetCommonFileName("PWG4_HighPtQA.root");
c38e3b95 1287 if(iPWG4PtQAMC){
9b2e70fd 1288 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskPWG4HighPtQAMC.C");
f87effcf 1289 AliPWG4HighPtQAMC *taskQAMC = 0;
1290 if(kUseMC){
36c36a0c 1291 if(iPWG4PtQAMC&1){
dc6bbd38 1292 taskQAMC = AddTaskPWG4HighPtQAMCAll(kGridDataSet.Data());
36c36a0c 1293 }
f87effcf 1294 }
c38e3b95 1295 if (!taskQAMC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQAMC cannot run for this train conditions - EXCLUDED");
1296 }
1297
7b90d977 1298 if(iPWG4PtTrackQA){
9b2e70fd 1299 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskPWG4HighPtTrackQA.C");
eb1739b7 1300 if(iPWG4PtTrackQA&2)AddTaskPWG4HighPtTrackQAAll(kGridDataSet.Data(),kIsPbPb,iAODanalysis);
1301 else AddTaskPWG4HighPtTrackQAAllReduced(kGridDataSet.Data(),kIsPbPb,iAODanalysis);
7b90d977 1302 }
1303
c38e3b95 1304 if(iPWG4PtQATPC){
9b2e70fd 1305 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskPWG4HighPtQATPConly.C");
10295ac3 1306 AliPWG4HighPtQATPConly *taskQATPC = 0;
b1cd0099 1307 if(iPWG4PtQATPC&1)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),1);
1308 if(iPWG4PtQATPC&2)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),2);
10295ac3 1309
1310 if (!taskQATPC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQATPC cannot run for this train conditions - EXCLUDED");
c38e3b95 1311 }
3878a941 1312
1f329128 1313 if(iPWG4Cosmics){
9b2e70fd 1314 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskPWG4CosmicCandidates.C");
1f329128 1315
1316 AliPWG4CosmicCandidates *taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(0);
1317 taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(1);
1318
1319 if (!taskPWG4CosmicCandidates) ::Warning("AnalysisTrainPWG4Jets", "AddTaskPWG4CosmicCandidates cannot run for this train conditions - EXCLUDED");
1320 }
1321
1322
c38e3b95 1323 if(iPWG4PtSpectra){
9b2e70fd 1324 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskPWG4HighPtSpectra.C");
b6b70f4b 1325 AddTaskPWG4HighPtSpectraAll(kGridDataSet.Data(),kIsPbPb,iAODanalysis);
c38e3b95 1326 }
b6b70f4b 1327
c38e3b95 1328 //==========================================================================
1329 // FOR THE REST OF THE TASKS THE MACRO AddTaskXXX() is not yet implemented/
1330 // Run the analysis
1331 //
1332 if (kPluginUse) {
1333 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1334 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1335 }
1336
1337 if (mgr->InitAnalysis()) {
1338 mgr->PrintStatus();
1339 // if (kSaveTrain || strlen(config_file)) gSystem->ChangeDirectory(kTrainName);
e84da0a5 1340 if (!strcmp(plugin_mode,"submit")&&smode=="GRID"){
c38e3b95 1341 TString alien_workdir = gGrid->GetHomeDirectory();
1342 if (iAODanalysis) alien_workdir += "analysisAOD";
1343 else alien_workdir += "analysisESD";
c22feddd 1344 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s%s",kGridDataSet.Data(),kGridExtraAliendirLevel.Data());
c38e3b95 1345 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
e84da0a5 1346 printf("=== AnalysisTrainPWG4Jets:: Registering jdl in the work directory alien://%s/%s, should be done by the manager! ===\n",
c38e3b95 1347 alien_workdir.Data(),gridhandler->GetGridOutputDir());
58ef946c 1348
1349 TString dest;
1350 dest = Form("%s/%s/%s.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1351 if(AliAnalysisAlien::FileExists(dest.Data())){
bbb42949 1352 Printf("%s exist on grid removing...",dest.Data());
1353 gGrid->Rm(dest.Data());
58ef946c 1354 }
bbb42949 1355 Printf("%s copy ...",dest.Data());
58ef946c 1356 TFile::Cp(Form("file:%s.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
4721d8c5 1357
1358
1359 TString dest;
1360 dest = Form("%s/%s/%s_merge.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1361 if(AliAnalysisAlien::FileExists(dest.Data())){
bbb42949 1362 Printf("%s exist on grid removing...",dest.Data());
1363 gGrid->Rm(dest.Data());
4721d8c5 1364 }
bbb42949 1365 Printf("%s copy ...",dest.Data());
4721d8c5 1366 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
f84df50f 1367
bbb42949 1368 dest = Form("%s/%s/%s_merge_final.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1369 if(AliAnalysisAlien::FileExists(dest.Data())){
1370 Printf("%s exist on grid removing...",dest.Data());
1371 gGrid->Rm(dest.Data());
1372 }
1373 Printf("%s copy ...",dest.Data());
1374 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
c38e3b95 1375 }
3878a941 1376 AliLog::SetGlobalLogLevel(AliLog::kError);
c166d299 1377 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
1378 TFile * fM = TFile::Open("manager_local.root","RECREATE");
1379 mgr->Write();
1380 fM->Close();
1381 }
46534866 1382
1383 // grmpf, aliroot error handler overwrites root
1384 gErrorIgnoreLevel = kErrorIgnoreLevel;
1385 if(gErrorIgnoreLevel>3000) AliLog::SetGlobalLogLevel(AliLog::kFatal);
c38e3b95 1386 StartAnalysis(smode, chain);
4a6f59cb 1387 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
1388 for(int i = 0;i < mgr->GetTopTasks()->GetEntries();i++){
1389 mgr->ProfileTask(i);
1390 }
1391 }
c38e3b95 1392 if (!strcmp(plugin_mode, "offline")&&smode=="GRID"){
e84da0a5 1393 // Offline mode path files
1394 // PatchJDL();
d8f21f85 1395 // PatchAnalysisMacro();
e84da0a5 1396 }
c38e3b95 1397
e84da0a5 1398 if (kSaveTrain && smode=="GRID") {
1399 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1400 TString alien_workdir = gGrid->GetHomeDirectory();
1401 if (iAODanalysis) alien_workdir += "analysisAOD";
3878a941 1402 else alien_workdir += "analysisESD";
c22feddd 1403 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s%s",kGridDataSet.Data(),kGridExtraAliendirLevel.Data());
e84da0a5 1404 // kGridOutdir = gridhandler->GetGridOutputDir();
1405 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
c38e3b95 1406 alien_workdir.Data());
e84da0a5 1407 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data())))
1408 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
1409 if (strcmp(plugin_mode, "test"))
1410 TFile::Cp(Form("file:%sConfig.C",kTrainName.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
1411 }
1412 }
c38e3b95 1413}
1414
1415//______________________________________________________________________________
1416void StartAnalysis(const char *mode, TChain *chain) {
1417// Start analysis.
1418 Int_t imode = -1;
1419 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1420 if (!strcmp(mode, "LOCAL")) imode = 0;
1421 if (!strcmp(mode, "PROOF")) imode = 1;
1422 if (!strcmp(mode, "GRID")) imode = 2;
1423 switch (imode) {
1424 case 0:
1425 if (!chain) {
1426 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1427 return;
1428 }
82ebd295 1429 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
c38e3b95 1430 return;
1431 case 1:
1432 if (!kProofDataSet.Length()) {
1433 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "kProofDataSet is empty");
1434 return;
1435 }
1436 mgr->StartAnalysis(mode, kProofDataSet, kProofEvents,kProofOffset);
1437 return;
1438 case 2:
1439 if (kPluginUse) {
1440 if (!mgr->GetGridHandler()) {
1441 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Grid plugin not initialized");
1442 return;
1443 }
ebad39a9 1444 mgr->StartAnalysis("grid",chain,kNumberOfEvents);
c38e3b95 1445 } else {
1446 if (!chain) {
1447 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1448 return;
1449 }
d5e8640d 1450 // mgr->StartAnalysis(mode, chain);
ebad39a9 1451 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
c38e3b95 1452 }
1453 return;
1454 }
1455}
1456
1457//______________________________________________________________________________
1458void CheckModuleFlags(const char *mode) {
1459// Checks selected modules and insure compatibility
1460 Int_t imode = -1;
1461 if (!strcmp(mode, "LOCAL")) imode = 0;
1462 if (!strcmp(mode, "PROOF")) imode = 1;
1463 if (!strcmp(mode, "GRID")) imode = 2;
1464
1465
e84da0a5 1466 if (kUseCPAR) {
1467 kPluginAliRootVersion = ""; // NO aliroot if we use CPAR
1468 }
c38e3b95 1469
1470 if (imode==1) {
1471 if (!kUsePAR) {
1472 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
1473 kUsePAR = kTRUE;
1474 }
1475 }
1476 if (imode != 2) {
1477 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
1478 kPluginUse = kFALSE;
1479 }
1480
1481
1482 if(!kIsMC){
1483 // switch off anthin related to MC
1484 kUseMC = 0;
1485 kUseAODMC = 0;
1486 kUseTR = kFALSE;
1487 }
1488
f4132e7d 1489 // Decide if we have PbPb
e5ee1c19 1490 if(kGridDataSet.CompareTo("LHC10h")==0||kGridDataSet.Contains("LHC10h")||kGridDataSet.CompareTo("LHC11h")==0||kGridDataSet.Contains("LHC11h")) {
1c79997e 1491 Printf("Using settings for Pb+Pb");
f4132e7d 1492 kIsPbPb = true;
1493 }
1494
1495
1496
c38e3b95 1497 if (iAODanalysis) {
1498 // AOD analysis
1499 if (kUseMC)
1500 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
1501 if (kUseAODTags)
1502 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
1503 kUseMC = kFALSE;
1504 kUseTR = kFALSE;
1505 kUseAODTags = kFALSE;
1506 if (iESDfilter)
1507 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
1508 iESDfilter = 0;
e84da0a5 1509 if (iPhysicsSelection)
1510 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "Physics Selection disabled in analysis on AOD's");
1511 iPhysicsSelection = 0;
c38e3b95 1512 if (!iAODhandler) {
d89b8229 1513 if (iJETAN || iJETANReader || iJETANFinder)
c38e3b95 1514 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
1515 iJETAN = 0;
d89b8229 1516 iJETANReader=0;
1517 iJETANFinder=0;
c38e3b95 1518 iDIJETAN = 0;
1519 }
1520 // Disable tasks that do not work yet on AOD data
58ef946c 1521 if(iPWG4JCORRAN)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 JCORRAN disabled in analysis on AOD's");
4d62ae1a 1522 iPWG4JCORRAN = 0;
c38e3b95 1523 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
1524 iPWG4PtQAMC = 0;
1525 if( iPWG4PtQATPC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtTPC disabled in analysis on AOD's");
1526 iPWG4PtQATPC = 0;
1f329128 1527 if( iPWG4Cosmics)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Comics disabled in analysis on AOD's");
1528 iPWG4Cosmics = 0;
1529
b53f2e4f 1530 if(iPWG4KMeans)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4KMeans disabled on AOD's");
1531 iPWG4KMeans = 0;
d2e6cdd5 1532 if (iPWG4JetCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4Jetcorr disabled on AOD's");
1533 iPWG4JetCorr = 0;
c38e3b95 1534 if (iPWG4PartCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
1535 iPWG4PartCorr = 0;
d2e6cdd5 1536 if (iPWG4CaloQA)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4CaloQA disabled on AOD's");
1537 iPWG4CaloQA = 0;
911a740f 1538 if (iPWG4Tagged)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4tagged disabled on AOD's");
1539 iPWG4Tagged = 0;
121e4bd5 1540 if (iPWG4omega3pi)
1541 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
1542 iPWG4omega3pi = 0;
2bfe5463 1543 if(iPWGPPQASym)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWGPP QA Sym disabled in analysis on AOD's");
53c63663 1544 if (iPWG4GammaConv)::Info("AnalysisPWG4Jets.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's");
1545 iPWG4GammaConv = 0;
2bfe5463 1546 iPWGPPQASym = 0;
f4132e7d 1547 iCentralitySelection = 0;
c38e3b95 1548 } else {
1549 // ESD analysis
f4132e7d 1550
1551 if(kIsPbPb){
1552 iCentralitySelection = 1;
1553 }
1554
c38e3b95 1555 if (!kUseMC){
1556 kUseTR = kFALSE;
1557
1558 if(kUseKinefilter)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Kine Filter disabled in analysis without MC");
1559 kUseKinefilter = kFALSE;
1560 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis without MC");
1561 iPWG4PtQAMC = 0;
9748e967 1562 if( iPWG4CorrectionsUE)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 CorrectionsUE disabled in analysis without MC");
1563 iPWG4CorrectionsUE = 0;
c38e3b95 1564 }
c38e3b95 1565 if (!iESDfilter){
1566 kUseKinefilter = kFALSE;
1567 kUseMuonfilter = kFALSE;
1568 }
d89b8229 1569 if(!iJETAN ||iJETANReader || iJETANFinder){
cc636095 1570 iPWG4JetSpectrum = iPWG4UE = iPWG4CorrectionsUE = iPWG4ThreeJets = iPWG4QGSep = iDIJETAN = 0;
c38e3b95 1571 }
1572 }
7b90d977 1573 iPWG4JetTasks = iPWG4JetServices||iPWG4JetSpectrum||iPWG4UE||iPWG4LeadingUE||iPWG4PtQAMC||iPWG4PtTrackQA||iPWG4PtSpectra||iPWG4PtQATPC||iPWG4Cosmics||iPWG4ThreeJets||iPWG4QGSep||iPWG4JetChem||iPWG4Minijet||iPWG4Fragmentation;
d2e6cdd5 1574 iPWG4PartCorrLibs = iPWG4PartCorr||iPWG4Tagged||iPWG4CaloQA;
17d96675 1575 iPWG4GammaConvLib = iPWG4GammaConv||iPWG4CaloConv;
1576
1577
d89b8229 1578 iEMCUtilLibs = iPWG4JetTasks||iPWG4PartCorrLibs||iPWG4JCORRAN||iPWG4GammaConvLib||iJETAN||iJETANReader||iJETANFinder;
1579 iJETANLib = (iPWG4JetTasks||iJETAN||iDIJETAN) && !(iJETANReader||iJETANFinder) ;
1580 iJETANdevLib = (iPWG4JetTasks||iJETANReader||iJETANFinder||iDIJETAN) && !iJETAN ;
17d96675 1581
c38e3b95 1582 if (iESDfilter) {iAODhandler=1;}
1583 if (kUseKinefilter && !kUseMC) kUseKinefilter = kFALSE;
1584 if (kUseAODTags && !iAODhandler) kUseAODTags = kFALSE;
1585
1586
1587
1588}
1589
1590//______________________________________________________________________________
1591Bool_t Connect(const char *mode) {
1592// Connect <username> to the back-end system.
1593 Int_t imode = -1;
1594 if (!strcmp(mode, "LOCAL")) imode = 0;
1595 if (!strcmp(mode, "PROOF")) imode = 1;
1596 if (!strcmp(mode, "GRID")) imode = 2;
1597 TString username = gSystem->Getenv("alien_API_USER");
1598 switch (imode) {
1599 case 0:
1600 break;
1601 case 1:
1602 if (!username.Length()) {
1603 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1604 1. Have called: alien-token-init <username>\n \
1605 2. Have called: >source /tmp/gclient_env_$UID");
1606 return kFALSE;
1607 }
1608 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
1609 username.Data(), kProofCluster.Data());
1610 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
1611// TProof::Open(Form("%s@%s:31093", username.Data(), kProofCluster.Data()));
1612 TProof::Open(Form("%s@%s", username.Data(), kProofCluster.Data()));
1613 if (!gProof) {
1614 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
1615 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
1616 return kFALSE;
1617 }
1618 if(kProofClearPackages)gProof->ClearPackages();
1619
1620 if(kProofSaveToAlien){
1621 TGrid::Connect("alien://");
1622 if (gGrid) {
1623 TString homedir = gGrid->GetHomeDirectory();
1624 TString workdir = homedir + kTrainName;
1625 if (!gGrid->Cd(workdir)) {
1626 gGrid->Cd(homedir);
1627 if (gGrid->Mkdir(workdir)) {
1628 gGrid->Cd(kTrainName);
1629 ::Info("AnalysisTrainPWG4Jets::Connect()", "Directory %s created", gGrid->Pwd());
1630 }
1631 }
1632 gGrid->Mkdir("proof_output");
1633 gGrid->Cd("proof_output");
1634 kProofOutdir = Form("alien://%s", gGrid->Pwd());
1635 }
1636 }
1637 break;
1638 case 2:
1639 if (!username.Length()) {
1640 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1641 1. Have called: alien-token-init <username>\n \
1642 2. Have called: >source /tmp/gclient_env_$UID");
1643 return kFALSE;
1644 }
1645 if (kPluginUse && !gSystem->Getenv("alien_CLOSE_SE")) {
1646 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode),
1647 "When using the AliEn plugin it is preferable to define the \
1648 variable alien_CLOSE_SE in your environment.");
1649 return kFALSE;
1650 }
1651 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to AliEn ...",
1652 username.Data());
1653 TGrid::Connect("alien://");
1654 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
1655 break;
1656 default:
1657 ::Error("AnalysisTrainPWG4Jets.C::Connect", "Unknown run mode: %s", mode);
1658 return kFALSE;
1659 }
1660 ::Info("AnalysisTrainPWG4Jets.C::Connect","Connected in %s mode", mode);
1661 return kTRUE;
1662}
1663
1664//______________________________________________________________________________
1665Bool_t LoadCommonLibraries(const char *mode)
1666{
34fc6450 1667 if (!gSystem->Getenv("ALICE_ROOT")) {
1668 ::Error("AnalysisTrainPWG4Jets.C", "Analysis train requires that ALICE_ROOT is set to pick up Configurations");
f12de05f 1669 return kFALSE;
1670 }
1671
1672 // Load common analysis libraries.
c38e3b95 1673 Int_t imode = -1;
1674 if (!strcmp(mode, "LOCAL")) imode = 0;
1675 if (!strcmp(mode, "PROOF")) imode = 1;
1676 if (!strcmp(mode, "GRID")) imode = 2;
c38e3b95 1677 Bool_t success = kTRUE;
1678 // ROOT libraries
4070f709 1679 gSystem->Load("libTree");
1680 gSystem->Load("libGeom");
1681 gSystem->Load("libVMC");
1682 gSystem->Load("libPhysics");
1683 gSystem->Load("libMinuit");
c38e3b95 1684
1685 // Load framework classes. Par option ignored here.
1686 switch (imode) {
1687 case 0:
1688 case 2:
1689 if (kUseCPAR) {
1690 success &= LoadLibrary("STEERBase", mode, kTRUE);
1691 success &= LoadLibrary("ESD", mode, kTRUE);
1692 success &= LoadLibrary("AOD", mode, kTRUE);
1693 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
7b90d977 1694 success &= LoadLibrary("OADB", mode, kTRUE);
78bc93b3 1695 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
d8f21f85 1696 success &= LoadLibrary("ROOTFILES", mode, kTRUE);
7b90d977 1697 // success &= LoadLibrary("EventMixing", mode,kTRUE);
c38e3b95 1698 success &= LoadLibrary("CORRFW", mode, kTRUE);
1699 } else {
1700 success &= LoadLibrary("libSTEERBase.so", mode);
1701 success &= LoadLibrary("libESD.so", mode);
1702 success &= LoadLibrary("libAOD.so", mode);
1703 success &= LoadLibrary("libANALYSIS.so", mode);
7b90d977 1704 success &= LoadLibrary("libOADB.so", mode, kTRUE);
78bc93b3 1705 success &= LoadLibrary("libANALYSISalice.so", mode);
7b90d977 1706 // success &= LoadLibrary("libEventMixing.so", mode);
c38e3b95 1707 success &= LoadLibrary("libCORRFW.so", mode);
1708 gROOT->ProcessLine(".include $ALICE_ROOT/include");
1709 }
1710 break;
1711 case 1:
1712 Int_t ires = -1;
1713 if (kProofUseAFPAR && !gSystem->AccessPathName(kProofAFversion)) ires = gProof->UploadPackage(kProofAFversion);
1714 if (ires < 0) {
1715 success &= LoadLibrary("STEERBase", mode);
1716 success &= LoadLibrary("ESD", mode);
1717 success &= LoadLibrary("AOD", mode);
1718 success &= LoadLibrary("ANALYSIS", mode);
1719 success &= LoadLibrary("ANALYSISalice", mode);
070f06d2 1720 success &= LoadLibrary("EventMixing", mode);
c38e3b95 1721 success &= LoadLibrary("CORRFW", mode);
1722 } else {
1723 ires = gProof->EnablePackage(kProofAFversion);
1724 if (ires<0) success = kFALSE;
1725 success &= LoadLibrary("CORRFW", mode);
1726 }
1727 break;
1728 default:
1729 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
1730 return kFALSE;
1731 }
1732 if (success) {
1733 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
1734 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
1735 gSystem->GetIncludePath());
1736 } else {
1737 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: FAILED");
1738 }
1739
1740 return success;
1741}
1742
1743//______________________________________________________________________________
1744Bool_t LoadAnalysisLibraries(const char *mode)
1745{
1746// Load common analysis libraries.
9748e967 1747 Bool_t success = kTRUE;
cfd02305 1748 if (useTender) {
1749 if (!LoadLibrary("TENDER", mode, kTRUE) ||
1750 !LoadLibrary("TENDERSupplies", mode, kTRUE)) return kFALSE;
1751 }
c38e3b95 1752 if (iESDfilter) {
b0a36f28 1753 /*
c38e3b95 1754 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
1755 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
b0a36f28 1756 */
c38e3b95 1757 }
1758 // JETAN
e6993a52 1759 if (iJETANLib) {
b53f2e4f 1760 // this part needs some rework in case we do not need the fastjed finders for processing
7b90d977 1761 if(iEMCUtilLibs){
1762 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
1763 !LoadLibrary("PHOSUtils", mode, kTRUE)) return kFALSE;
1764 }
b53f2e4f 1765 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
c38e3b95 1766 if (!strcmp(mode, "PROOF")){
ef1e462f 1767 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libCGAL.so\"\)", kTRUE);
c38e3b95 1768 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libfastjet.so\"\)", kTRUE);
1769 // problem when loading siscone copiled with different gcc version??
1770 // gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libsiscone.so\"\)", kTRUE);
1771 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libSISConePlugin.so\"\)", kTRUE);
1772 }
b53f2e4f 1773 if(!kUsePAR){
e84da0a5 1774 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
1775 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
1776 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
1777 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
1778 }
1779 else{
1780 // par files plus FASTJET needs some extra work... need to change
1781 // the loading sequence in the auto generated .C file
1782 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
1783 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
1784 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
1785 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
1786 }
c38e3b95 1787 if (!LoadLibrary("FASTJETAN", mode, kTRUE)) return kFALSE;
1788 }
d89b8229 1789
1790 // JETANdev
1791 if (iJETANdevLib) {
1792 // this part needs some rework in case we do not need the fastjed finders for processing
1793 if(iEMCUtilLibs){
1794 if (!LoadLibrary("EMCALUtils", mode, kTRUE) &&
1795 !LoadLibrary("PHOSUtils", mode, kTRUE)) return kFALSE;
1796 }
1797 if (!LoadLibrary("JETANdev", mode, kTRUE)) return kFALSE;
1798 if (!strcmp(mode, "PROOF")){
1799 if (!LoadLibrary("FASTJET", mode, kTRUE)) return kFALSE;
1800 }
1801 if(!kUsePAR){
1802 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
1803 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
1804 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
1805 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
1806 }
1807 else{
1808 // par files plus FASTJET needs some extra work... need to change
1809 // the loading sequence in the auto generated .C file
1810 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
1811 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
1812 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
1813 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
1814 }
1815 if (!LoadLibrary("FASTJETANdev", mode, kTRUE)) return kFALSE;
1816 }
1817
c38e3b95 1818 if(iPWG4JetTasks){
17f4943e 1819 if (!LoadLibrary("PWGTools", mode, kTRUE)) return kFALSE;
a89cc1af 1820 if (!LoadLibrary("PWGJE", mode, kTRUE)) return kFALSE;
c38e3b95 1821 }
58ef946c 1822
2bfe5463 1823 if(iPWGPPQASym){
1824 if (!LoadSource(Form("%s/PWGPP/AliAnalysisTaskQASym.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
c38e3b95 1825 }
121e4bd5 1826 if(iPWG4TmpSourceSara){
c166d299 1827 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
34fc6450 1828 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskEta.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
c580ebbb 1829 }
c166d299 1830
911a740f 1831 if (iPWG4PartCorrLibs) {
4721d8c5 1832 if (!LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
c38e3b95 1833 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
1834 }
4721d8c5 1835 if(iPWG4JCORRAN){
1836 // PWG4 particle correlations
1837 if(!LoadLibrary("PWG4JCORRAN",mode,kTRUE))return kFALSE;
1838 }
d2e6cdd5 1839 if (iPWG4JetCorr) {
1840 if (!LoadLibrary("PWG4JetCorrel", mode, kTRUE)) return kFALSE;
1841 }
121e4bd5 1842 if (iPWG4omega3pi) {
1843 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
1844 }
17d96675 1845 if (iPWG4GammaConvLib) {
53c63663 1846 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
1847 }
c38e3b95 1848
1849 ::Info("AnalysisTrainPWG4Jets.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
1850 return kTRUE;
1851}
1852
1853//______________________________________________________________________________
1854Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
1855{
1856// Load a module library in a given mode. Reports success.
1857 Int_t imode = -1;
1858 Int_t result;
1859 TString smodule(module);
1860 if (!strcmp(mode, "LOCAL")) imode = 0;
1861 if (!strcmp(mode, "PROOF")) imode = 1;
1862 if (!strcmp(mode, "GRID")) imode = 2;
1863 TString mod(module);
1864 if (!mod.Length()) {
1865 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Empty module name");
1866 return kFALSE;
1867 }
1868 // If a library is specified, just load it
1869 if (smodule.EndsWith(".so")) {
1870 mod.Remove(mod.Index(".so"));
1871 result = gSystem->Load(mod);
1872 if (result < 0) {
1873 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load library %s", module);
1874 return kFALSE;
1875 }
1876 if (rec) anaLibs += Form("%s.so ",mod.Data());
e84da0a5 1877 if (rec) anaLibsExtra += Form("%s.so ",mod.Data());
c38e3b95 1878 return kTRUE;
1879 }
1880 // Check if the library is already loaded
9a3036c4 1881 if (strlen(gSystem->GetLibraries(module, "", kFALSE)) > 0)
c38e3b95 1882 return kTRUE;
1883 switch (imode) {
1884 case 0:
1885 case 2:
1886 if (kUsePAR) {
1887 result = SetupPar(module);
1888 if (rec) anaPars += Form("%s.par ", module);
1889 } else {
b0635849 1890 result = gSystem->Load(Form("lib%s", module));
c38e3b95 1891 if (rec) anaLibs += Form("lib%s.so ", module);
1892 }
1893 break;
1894 case 1:
1895 if(!gSystem->AccessPathName(module)){
1896 ::Info("AnalysisTrainPWG4Jets.C::LoadLibrary", "Removing directory %s",module);
1897 gSystem->Exec(Form("rm -rf %s",module));
1898 }
1899 result = gProof->UploadPackage(module);
1900 if (result<0) {
1901 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
1902 if (result<0) {
1903 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
1904 return kFALSE;
1905 }
1906 }
1907 result = gProof->EnablePackage(module);
1908 break;
1909 default:
1910 return kFALSE;
1911 }
1912 if (result < 0) {
1913 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load module %s", module);
1914 return kFALSE;
1915 }
1916 return kTRUE;
1917}
1918
1919
1920
1921//______________________________________________________________________________
1922Bool_t LoadSource(const char *source, const char *mode, Bool_t rec=kFALSE)
1923{
1924// Load a module library in a given mode. Reports success.
1925 Int_t imode = -1;
1926 Int_t result = -1;
1927 if (!strcmp(mode, "LOCAL")) imode = 0;
1928 if (!strcmp(mode, "PROOF")) imode = 1;
1929 if (!strcmp(mode, "GRID")) imode = 2;
1930 TString ssource(source);
1931 TString basename = gSystem->BaseName(ssource.Data());
1932 if (!ssource.Length()) {
1933 ::Error("AnalysisTrainPWG4Jets.C::LoadSource", "Empty task name");
1934 return kFALSE;
1935 }
4d62ae1a 1936 // we have a source code so compile it
c38e3b95 1937 if (ssource.EndsWith(".cxx")) {
1938 // need to copy it here other wise the path is also used on grid...
1939 ssource.Remove(ssource.Index(".cxx"));
1940 basename.Remove(basename.Index(".cxx"));
1941 Printf("LoadSources:: Copying... path %s{cxx,h}",ssource.Data());
1942 gSystem->Exec(Form("cp %s.cxx . ",ssource.Data()));
1943 gSystem->Exec(Form("cp %s.h . ",ssource.Data()));
1944 // Path to code
1945 // only needed for local compilation, in grid and proof mode
1946 // the task headers are uploaded
1947 // path.Remove(path.Index(gSystem->BaseName(path.Data())));
1948 // Printf("LoadSources:: Including path %s",path.Data());
1949 // if(path.Length()>0)gROOT->ProcessLine(Form(".include %s",path.Data()));
1950 Printf("LoadSources:: Loading... path %s",basename.Data());
1951 switch (imode) {
1952 case 0:
b53f2e4f 1953 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1954 break;
1955 case 1:
b53f2e4f 1956 result = gProof->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1957 break;
1958 case 2:
b53f2e4f 1959 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1960 if (rec){
1961 // what we want to compile
1962 anaSources += Form("%s.cxx ",basename.Data());
1963 // what we need as input...
1964 anaLibs += Form("%s.cxx %s.h ",basename.Data(),basename.Data());
1965 }
1966 break;
1967 default:
1968 return kFALSE;
1969 }
1970 }
1971 if (result < 0) {
1972 ::Error("AnalysisTrainPWG4Jets.C::LoadSources", "Could not load source %s", source);
1973 return kFALSE;
1974 }
1975 return kTRUE;
1976}
1977
1978
1979//______________________________________________________________________________
1980TChain *CreateChain(const char *mode, const char *plugin_mode)
1981{
1982// Create the input chain
1983 Int_t imode = -1;
1984 if (!strcmp(mode, "LOCAL")) imode = 0;
1985 if (!strcmp(mode, "PROOF")) imode = 1;
1986 if (!strcmp(mode, "GRID")) imode = 2;
1987 TChain *chain = NULL;
1988 // Local chain
1989 switch (imode) {
1990 case 0:
1991 if (iAODanalysis) {
1992 if (!kLocalXMLDataset.Length()) {
1993 // Local AOD
1994 chain = new TChain("aodTree");
1995 TString line;
1996 ifstream in;
1997 in.open(kLocalDataList.Data());
37eb26ea 1998 Int_t ic = 0;
c38e3b95 1999 while (in.good()) {
2000 in >> line;
2001 if (line.Length() == 0) continue;
37eb26ea 2002 Printf("%d adding %s",ic,line.Data());
c38e3b95 2003 chain->Add(line.Data());
37eb26ea 2004 ic++;
c38e3b95 2005 }
2006 } else {
2007 // Interactive AOD
2008 chain = CreateChainSingle(kLocalXMLDataset, "aodTree");
2009 }
2010 } else {
2011 if (!kLocalXMLDataset.Length()) {
2012 // Local ESD
2013 chain = new TChain("esdTree");
2014 TString line;
2015 ifstream in;
2016 in.open(kLocalDataList.Data());
2017 while (in.good()) {
2018 in >> line;
2019 if (line.Length() == 0) continue;
2020 cout << " line = " << line << endl;
2021 chain->Add(line.Data());
2022 }
2023 } else {
2024 // Interactive ESD
2025 chain = CreateChainSingle(kLocalXMLDataset, "esdTree");
2026 }
2027 }
2028 break;
2029 case 1:
2030 break;
2031 case 2:
2032 if (kPluginUse) {
2033// AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
2034// AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
2035 } else {
2036 TString treeName = "esdTree";
2037 if (iAODanalysis) treeName = "aodTree";
2038 chain = CreateChainSingle("wn.xml", treeName);
2039 }
2040 break;
2041 default:
2042 }
2043 if (chain && chain->GetNtrees()) return chain;
2044 return NULL;
2045}
2046
2047//______________________________________________________________________________
2048TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
2049{
2050 printf("*******************************\n");
2051 printf("*** Getting the ESD Chain ***\n");
2052 printf("*******************************\n");
2053 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
2054
2055 if (!myCollection) {
2056 ::Error("AnalysisTrainPWG4Jets.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
2057 return NULL ;
2058 }
2059
2060 TChain* chain = new TChain(treeName);
2061 myCollection->Reset() ;
2062 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
2063 chain->ls();
2064 return chain;
2065}
2066
2067//______________________________________________________________________________
2068Int_t SetupPar(char* pararchivename)
2069{
2070 if (!pararchivename || !strlen(pararchivename)) return -1;
2071 char processline[1024];
2072 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
2073 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
2074 ::Info("AnalysisTrainPWG4Jets.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
9748e967 2075 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
2076 Form("%s.par",pararchivename));
c38e3b95 2077 } else {
2078 ::Error("AnalysisTrainPWG4Jets.C::SetupPar", "Cannot find %s.par", pararchivename);
2079 return -1;
2080 }
2081 }
2082 if (kPluginUse && kSaveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, kTrainName.Data()));
2083 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
2084
2085 TString ocwd = gSystem->WorkingDirectory();
2086 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
2087
2088 // check for BUILD.sh and execute
2089 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
2090 printf("*******************************\n");
2091 printf("*** Building PAR archive ***\n");
2092 printf("*******************************\n");
2093 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
2094 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
2095 return -1;
2096 }
2097 }
2098
2099 // check for SETUP.C and execute
2100 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
2101 printf("*******************************\n");
2102 printf("*** Setup PAR archive ***\n");
2103 printf("*******************************\n");
2104 gROOT->Macro("PROOF-INF/SETUP.C");
2105 }
4478beda 2106 if (!gSystem->ChangeDirectory(ocwd.Data())){
2107 Error("Change back directory",Form("Cannot change to %s",ocwd.Data()));
2108 return -1;
2109 }
c38e3b95 2110 return 0;
2111}
2112
2113//______________________________________________________________________________
2114AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
2115{
2116// Check if user has a valid token, otherwise make one. This has limitations.
2117// One can always follow the standard procedure of calling alien-token-init then
2118// source /tmp/gclient_env_$UID in the current shell.
c8fb37dd 2119// if (!AliAnalysisGrid::CreateToken()) return NULL;
c38e3b95 2120 AliAnalysisAlien *plugin = new AliAnalysisAlien();
2121// Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
2122 plugin->SetRunMode(plugin_mode);
2926ddbb 2123 plugin->SetCheckCopy(kFALSE);
c38e3b95 2124 if (kPluginUseProductionMode) plugin->SetProductionMode();
2125 plugin->SetJobTag(kJobTag);
d8f21f85 2126 plugin->SetNtestFiles(1);
c38e3b95 2127// plugin->SetPreferedSE("ALICE::NIHAM::File");
2128// Set versions of used packages
e84da0a5 2129 plugin->SetAPIVersion("V1.1x");
2130 // plugin->SetAPIVersion("V1.0x");
2131// plugin->SetAPIVersion("V2.4");
c38e3b95 2132 plugin->SetROOTVersion(kPluginRootVersion);
2133 plugin->SetAliROOTVersion(kPluginAliRootVersion);
2134// Declare input data to be processed.
2135// Method 1: Create automatically XML collections using alien 'find' command.
2136// Define production directory LFN
2137 plugin->SetGridDataDir(kGridDatadir.Data());
2138// Set data search pattern
78bc93b3 2139 if (iAODanalysis) plugin->SetDataPattern(Form(" %s/*/*AliAOD.root",kGridPassPattern.Data()));
c8fb37dd 2140 else plugin->SetDataPattern(Form(" %s/*/*AliESDs.root",kGridPassPattern.Data()));
c38e3b95 2141// ...then add run numbers to be considered
2142// plugin->SetRunRange(kGridRunRange[0], kGridRunRange[1]);
2143 for (Int_t i=kGridRunRange[0]; i<=kGridRunRange[1]; i++) {
2144 Printf("AnalysisTrainPWG4Jets Adding run number %s", Form(kGridRunPattern.Data(),i));
2145 plugin->AddRunNumber(Form(kGridRunPattern.Data(),i));
2146 }
2147
2148 if(kGridLocalRunList.Length()>0){
2149 ifstream in1;
2150 in1.open(kGridLocalRunList.Data());
dae7dd67 2151 int iRun = 0;
4d16db9c 2152 int icount = 0;
9748e967 2153 Int_t nRun = 0;
9a5c5b1e 2154 // just use run numbers, negatives will be excluded
2155 while(in1>>iRun){
ffab794c 2156 if(iRun>=0){
2157 if(iRun>=0&&nRun>=kGridOffsetRunFromList&&(nRun<kGridMaxRunsFromList)){
f12de05f 2158 Printf("AnalysisTrainPWG4Jets Adding run number from File %d: %s",nRun,Form(kGridRunPattern.Data(),iRun));
9a5c5b1e 2159 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
ffab794c 2160
2161 }
2162 else{
f12de05f 2163 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d: %d",nRun, iRun);
ffab794c 2164 }
36c36a0c 2165 nRun++;
9a5c5b1e 2166 }
2167 else{
f12de05f 2168 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d: %d",nRun, iRun);
e84da0a5 2169 }
c38e3b95 2170 }
2171 }
c38e3b95 2172// Method 2: Declare existing data files (raw collections, xml collections, root file)
2173// If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
2174// XML collections added via this method can be combined with the first method if
2175// the content is compatible (using or not tags)
2176// plugin->AddDataFile("tag.xml");
2177// plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
2178// Define alien work directory where all files will be copied. Relative to alien $HOME.
3878a941 2179 TString alien_workdir = "";
2180
2181 if (iAODanalysis) alien_workdir += "analysisAOD";
2182 else alien_workdir += "analysisESD";
c22feddd 2183 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s%s",kGridDataSet.Data(),kGridExtraAliendirLevel.Data());
3878a941 2184 plugin->SetGridWorkingDir(alien_workdir.Data());
2185
c38e3b95 2186 // Declare alien output directory. Relative to working directory.
2187 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
2188 plugin->SetGridOutputDir(kGridOutdir);
2189
2190 // Add external packages
78bc93b3 2191 plugin->AddExternalPackage("boost::v1_43_0");
2192 plugin->AddExternalPackage("cgal::v3.6");
2193 plugin->AddExternalPackage("fastjet::v2.4.2");
c38e3b95 2194
2195
2196 // set extra libs before par file compilation
2197 anaLibs += kGridExtraFiles;
2198 anaLibs = anaLibs.Strip();
e84da0a5 2199 Printf("anaLibs %s",anaLibs.Data());
2200 Printf("anaLibsExtra %s",anaLibsExtra.Data());
2201
2202 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs.Data());
2203 if (anaLibsExtra.Length()) plugin->SetAdditionalRootLibs(anaLibsExtra.Data());
c38e3b95 2204
2205 TString ana_sources = "";
2206 TString ana_add = "";
2207 if (kUsePAR && anaPars.Length()) {
2208 printf("%s\n", anaPars.Data());
2209 TObjArray *arr;
2210 TObjString *objstr;
2211 arr = anaPars.Tokenize(" ");
2212 TIter next(arr);
2213 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
2214 delete arr;
2215 }
2216
2217// Declare the analysis source files names separated by blancs. To be compiled runtime
2218// using ACLiC on the worker nodes.
2219 ana_sources = anaSources.Strip();
2220// Declare all libraries (other than the default ones for the framework. These will be
2221// loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
2222
2223 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
2224 plugin->SetExecutableCommand(kPluginExecutableCommand.Data());
4721d8c5 2225 // Declare the output file names separated by blancs.
2226 // (can be like: file.root or file.root@ALICE::Niham::File)
c38e3b95 2227 plugin->SetMergeExcludes(kGridMergeExclude);
2228 plugin->SetMaxMergeFiles(kGridMaxMergeFiles);
2229 plugin->SetNrunsPerMaster(kGridRunsPerMaster);
9a5c5b1e 2230 plugin->SetMergeViaJDL(kPluginMergeViaJDL);
4721d8c5 2231 // Use fastread option
9a5c5b1e 2232 plugin->SetFastReadOption(kPluginFastReadOption);
4721d8c5 2233 // UseOverwrite mode
9a5c5b1e 2234 plugin->SetOverwriteMode(kPluginOverwriteMode);
4721d8c5 2235 // Optionally define the files to be archived.
2236 // plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
dc6a7461 2237 plugin->SetOutputToRunNo(kPluginOutputToRunNumber); // write the output to subdirs named after run number
c38e3b95 2238
2239 // Put default output files to archive
2240 TString listhists = "";
2241 TString listaods = "";
2242 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
2243 TIter next(mgr->GetOutputs());
2244 AliAnalysisDataContainer *output;
2245 while ((output=(AliAnalysisDataContainer*)next())) {
2246 const char *filename = output->GetFileName();
2247 if (!(strcmp(filename, "default"))) {
53c63663 2248 if (!mgr->GetOutputEventHandler()) continue;
c38e3b95 2249 filename = mgr->GetOutputEventHandler()->GetOutputFileName();
e84da0a5 2250 if (listaods.Length()) listaods += " ";
c38e3b95 2251 listaods += filename;
c38e3b95 2252 } else {
e84da0a5 2253 if(!listhists.Contains(filename)){
2254 if (listhists.Length()) listhists += " ";
c38e3b95 2255 listhists += filename;
2256 }
2257 }
2258 }
53c63663 2259
53c63663 2260 if (mgr->GetExtraFiles().Length()) {
e84da0a5 2261 if (listaods.Length()) listaods += " ";
53c63663 2262 listaods += mgr->GetExtraFiles();
c38e3b95 2263 }
53c63663 2264
2265 // if we do not fill the aod we do not need to store it
4721d8c5 2266 // kGridMergeExclude = listaods;
e84da0a5 2267
e2afec0c 2268 if(kSaveAOD>=0){
4721d8c5 2269 TString outputFiles = "";
2270 outputFiles += mgr->GetExtraFiles();
2271 if (listhists.Length()) outputFiles += " ";
2272 outputFiles += listhists;
e84da0a5 2273 plugin->SetDefaultOutputs(kFALSE);
4721d8c5 2274 Printf("%s:%d Starting with the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
2275 // remove
2276 // no harm done when we try to remove something that is not there :)
2277 if(!(kSaveAOD&(1<<0))){
2278 outputFiles.ReplaceAll("AliAOD.root ","");
2279 listaods.ReplaceAll("AliAOD.root ","");
2280 }
2281 if(!(kSaveAOD&(1<<1))){
2282 if(kDeltaAODJetName.Length())outputFiles.ReplaceAll(kDeltaAODJetName.Data(),"");
2283 if(kDeltaAODJetName.Length())listaods.ReplaceAll(kDeltaAODJetName.Data(),"");
2284
2285 }
2286 if(!(kSaveAOD&(1<<2))){
2287 if(kDeltaAODPartCorrName.Length())outputFiles.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
2288 if(kDeltaAODPartCorrName.Length())listaods.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
2289 }
2290 if(!(kSaveAOD&(1<<3))){
2291 if(kDeltaAODJCORRANName.Length())outputFiles.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
2292 if(kDeltaAODJCORRANName.Length())listaods.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
2293 }
2294
2295 //
e2afec0c 2296 plugin->SetDefaultOutputs(kFALSE);
4721d8c5 2297 Printf("%s:%d Saving the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
2298 plugin->SetOutputFiles(outputFiles.Data());
e84da0a5 2299 }
53c63663 2300
4721d8c5 2301 TString outputArchive;
4d5d766e 2302 outputArchive = Form("log_archive.zip:std*@%s","disk=1");
e84da0a5 2303 listaods.ReplaceAll(" ", ",");
2304 listhists.ReplaceAll(" ", ",");
4d5d766e 2305 if (listhists.Length()){
2306 outputArchive += " ";
2307 outputArchive += "root_archive.zip:";
2308 outputArchive += listhists;
2309 if (listaods.Length()){
2310 outputArchive += ",";
2311 outputArchive += listaods;
2312 }
2313 outputArchive += Form("@%s", kGridOutputStorages.Data());
2314 }
2315 else{
2316
2317 if (listaods.Length()){
2318 // we have only aod'ish output
2319 outputArchive += " ";
2320 outputArchive += "root_archive.zip:";
2321 outputArchive += listaods;
2322 outputArchive += Form("@%s", kGridOutputStorages.Data());
2323 }
2324 else{
2325 // no other outputs than std..
c38e3b95 2326 ::Fatal("AnalysisTrainPWG4Jets", "No task output !");
4d5d766e 2327 }
c38e3b95 2328 }
4d5d766e 2329
17d96675 2330 plugin->SetDefaultOutputs(kFALSE);
c38e3b95 2331 plugin->SetOutputArchive(outputArchive);
17d96675 2332
4721d8c5 2333
4d5d766e 2334 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
c38e3b95 2335 plugin->SetAnalysisMacro(Form("%s.C", kTrainName.Data()));
4d5d766e 2336 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
c38e3b95 2337 plugin->SetSplitMaxInputFileNumber(kGridFilesPerJob);
4d5d766e 2338 // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
27cdf9c4 2339 // plugin->SetMaxInitFailed(5);
4d5d766e 2340 // Optionally resubmit threshold.
c8fb37dd 2341 // plugin->SetMasterResubmitThreshold(90);
4d5d766e 2342 // Optionally set time to live (default 30000 sec)
8dc333da 2343 plugin->SetTTL(80000); // 22h...
4d5d766e 2344 // Optionally set input format (default xml-single)
c38e3b95 2345 plugin->SetInputFormat("xml-single");
4d5d766e 2346 // Optionally modify the name of the generated JDL (default analysis.jdl)
c38e3b95 2347 plugin->SetJDLName(Form("%s.jdl", kTrainName.Data()));
4d5d766e 2348 // Optionally modify the executable name (default analysis.sh)
c38e3b95 2349 plugin->SetExecutable(Form("%s.sh", kTrainName.Data()));
4d5d766e 2350 // Optionally modify job price (default 1)
c38e3b95 2351 plugin->SetPrice(1);
4d5d766e 2352 // Optionally modify split mode (default 'se')
c38e3b95 2353 plugin->SetSplitMode("se");
2354 return plugin;
2355}
2356
2357//______________________________________________________________________________
2358void WriteConfig()
2359{
2360// Write train configuration in a file. The file name has the format:
2361// train_[trainName]_ddMonthyyyy_time.C
2362 if (kUseDate) {
2363 gSystem->Exec("date +%d%b%Y_%Hh%M > date.tmp");
2364 ifstream fdate("date.tmp");
2365 if (!fdate.is_open()) {
2366 ::Error("AnalysisTrainPWG4Jets.C::Export","Could not generate file name");
2367 return;
2368 }
2369 const char date[64];
2370 fdate.getline(date,64);
2371 fdate.close();
2372 gSystem->Exec("rm date.tmp");
2373 kTrainName = Form("train_%s_%s", kTrainName.Data(), date);
2374 } else {
2375 kTrainName = Form("train_%s", kTrainName.Data());
2376 }
2377 TString cdir = gSystem->WorkingDirectory();
2378 gSystem->MakeDirectory(kTrainName);
2379 gSystem->ChangeDirectory(kTrainName);
2380 ofstream out;
2381 out.open(Form("%sConfig.C",kTrainName.Data()), ios::out);
2382 if (out.bad()) {
2383 ::Error("AnalysisTrainPWG4Jets.C::Export", "Cannot open ConfigTrain.C for writing");
2384 return;
2385 }
2386 out << "{" << endl;
2387 out << " kTrainName = " << "\"" << kTrainName.Data() << "\";" << endl;
2388 out << " kProofCluster = " << "\"" << kProofCluster.Data() << "\";" << endl;
2389 out << " kProofUseAFPAR = " << kProofUseAFPAR << ";" << endl;
2390 if (kProofUseAFPAR)
2391 out << " kProofAFversion = " << kProofAFversion.Data() << ";" << endl;
2392 out << " kProofDataSet = " << "\"" << kProofDataSet.Data() << "\";" << endl;
2393 out << " kPluginUse = " << kPluginUse << ";" << endl;
2394 out << " kUsePAR = " << kUsePAR << ";" << endl;
2395 out << " kUseCPAR = " << kUseCPAR << ";" << endl;
2396 out << " kPluginRootVersion = " << "\"" << kPluginRootVersion.Data() << "\";" << endl;
2397 out << " kPluginAliRootVersion = " << "\"" << kPluginAliRootVersion.Data() << "\";" << endl;
2398 out << " kGridDatadir = " << "\"" << kGridDatadir.Data() << "\";" << endl;
2399 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
2400 out << " kGridOutdir = " << "\"" << kGridOutdir.Data() << "\";" << endl;
2401 out << " kGridMaxMergeFiles = " << kGridMaxMergeFiles << ";" << endl;
2402 out << " kGridMergeExclude = " << "\"" << kGridMergeExclude.Data() << "\";" << endl;
2403 out << " kGridRunsPerMaster = " << kGridRunsPerMaster << ";" << endl;
2404 out << " kGridFilesPerJob = " << kGridFilesPerJob << ";" << endl;
2405 out << " kGridRunRange[0] = " << kGridRunRange[0] << ";" << endl;
2406 out << " kGridRunRange[1] = " << kGridRunRange[1] << ";" << endl;
2407 out << " kUseDebug = " << kUseDebug << ";" << endl;
2408 out << " kUseMC = " << kUseMC << ";" << endl;
2409 out << " kUseESDTags = " << kUseESDTags << ";" << endl;
2410 out << " kUseKinefilter = " << kUseKinefilter << ";" << endl;
2411 out << " kUseTR = " << kUseTR << ";" << endl;
2412 out << " kUseAODTags = " << kUseAODTags << ";" << endl;
2413 out << " kSaveTrain = " << "kFALSE;" << endl << endl;
2414 out << " // Analysis modules" << endl;
2415 out << " iAODanalysis = " << iAODanalysis << ";" << endl;
2416 out << " iAODhandler = " << iAODhandler << ";" << endl;
2417 out << " iESDfilter = " << iESDfilter << ";" << endl;
2418 out << " iJETAN = " << iJETAN << ";" << endl;
2419 out << "// Configuration fot the wagons" << endl;
2420 out << "}" << endl;
2421 ::Info("AnalysisTrainPWG4Jets.C::WriteConfig", "Train configuration wrote to file %s", Form("config_%s.C", kTrainName.Data()));
2422 gSystem->ChangeDirectory(cdir);
2423}
2424
2425//______________________________________________________________________________
2426Bool_t LoadConfig(const char *filename)
2427{
2428// Read train configuration from file
2429 if (gSystem->AccessPathName(filename)) {
2430 ::Error("AnalysisTrainPWG4Jets.C::LoadConfig", "Config file name not found");
2431 return kFALSE;
2432 }
2433 gROOT->ProcessLine(Form(".x %s", filename));
2434 ::Info("AnalysisTrainPWG4Jets.C::LoadConfig", "Train configuration loaded from file %s", filename);
2435 return kTRUE;
2436}
2437
2438Bool_t PatchJDL(){
2439 Printf(">>> Patching JDL");
2440 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
2441 AliAnalysisAlien* gridHandler = (AliAnalysisAlien*)mgr->GetGridHandler();
2442 TGridJDL *jdl = gridHandler->GetGridJDL();
2443 if(iJETAN)jdl->AddToPackages("fastjet","v2.4.0");
2444 gridHandler->WriteJDL(kFALSE);
0971dabc 2445 Printf("<<< Patching JDL");
c38e3b95 2446 return kTRUE;
2447}
2448
2449Bool_t PatchAnalysisMacro(){
4721d8c5 2450 Printf(">>> Patching AnalysisMacro");
2451 gSystem->Exec(Form("mv %s.C %s.C_tmp",kTrainName.Data(),kTrainName.Data()));
c38e3b95 2452
2453 ifstream in1;
2454 in1.open(Form("%s.C_tmp", kTrainName.Data()));
2455 char cLine[250];
2456 TString st;
2457 while(in1.getline(cLine,250)){
2458 st += cLine;
2459 st += "\n";
2460 }
4721d8c5 2461 Int_t index= -1;
c38e3b95 2462 index = st.Index("gSystem->Load(\"libPhysics\");");
2463 index += strlen("gSystem->Load(\"libPhysics\");");
4721d8c5 2464 /*
c38e3b95 2465 TObjArray *arr;
2466 TObjString *objstr;
2467 arr = anaLibs.Tokenize(" ");
2468 TIter next(arr);
4721d8c5 2469
c38e3b95 2470 add += "\n\n // added by CKB \n";
2471 while ((objstr=(TObjString*)next())){
e84da0a5 2472 if(objstr->GetString().Contains("PWG3"))continue;
c38e3b95 2473 if(objstr->GetString().EndsWith(".so"))add += Form("gSystem->Load(\"%s\");\n",objstr->GetString().Data());
2474 }
2475 delete arr;
4721d8c5 2476 */
3878a941 2477 // add += Form("AliLog::SetGlobalLogLevel(%d);\n",AliLog::GetGlobalLogLevel());
4721d8c5 2478 TString add = "";
2479
2480 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2481 add += "\n\n // added by CKB \n";
46534866 2482 if(kErrorIgnoreLevel>0)add += Form("gErrorIgnoreLevel = %d;\n",kErrorIgnoreLevel);
23adcac8 2483 add += "\n gSystem->AddIncludePath(\"./\"); \n";
f4132e7d 2484 add += "\n gSystem->SetFPEMask(); \n";
2485
2486
4721d8c5 2487 if(gGrid&&kPluginAliRootVersion.Length()==0){
bbb42949 2488 /*
4721d8c5 2489 add += "\n // Dirty hack for TRD reference data \n";
2490 add += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2491 add += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2492 add += "\"); \n";
bbb42949 2493 */
c38e3b95 2494 }
bbb42949 2495
4721d8c5 2496 add += "// BKC \n\n";
2497 st.Insert(index,add.Data());
e84da0a5 2498
2499 if(kUseDebug){
23adcac8 2500 // st.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
e84da0a5 2501 }
2502
4721d8c5 2503 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
2504 index = st.Index("gSystem->AddIncludePath(\"-I$"); // uncommen $ALICE_ROOT include for par files
2505 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2506 st.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2507 }
c166d299 2508
46534866 2509 if(AliLog::GetGlobalLogLevel()==AliLog::kFatal){
2510 index = st.Index("AliLog::SetGlobal"); // ncomment setting of log level, do my own
2511 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2512 st.Insert(index,"AliLog::SetGlobalLogLevel(AliLog::kFatal);// CKB \n // CKB comment out for own setting \n //");
2513 }
2514
c38e3b95 2515 ofstream out;
2516 out.open(Form("%s.C", kTrainName.Data()));
2517 if (out.bad()) {
2518 return kFALSE;
2519 }
2520 out << st << endl;
2521 Printf("<<< Patching AnalysisMacro");
4721d8c5 2522
2523
2524
2525
2526
2527 Printf(">>> Patching Merge Macro");
2528 gSystem->Exec(Form("mv %s_merge.C %s_merge.C_tmp",kTrainName.Data(),kTrainName.Data()));
2529
2530 ifstream in2;
2531 in2.open(Form("%s_merge.C_tmp", kTrainName.Data()));
2532 TString st2;
2533 while(in2.getline(cLine,250)){
2534 st2 += cLine;
2535 st2 += "\n";
2536 }
2537 index = st2.Index("gSystem->Load(\"libPhysics\");");
2538 index += strlen("gSystem->Load(\"libPhysics\");");
2539 TString add2 = "";
23adcac8 2540 add2 += "\n gSystem->AddIncludePath(\"./\"); \n";
4721d8c5 2541 if(gGrid&&kPluginAliRootVersion.Length()==0){
bbb42949 2542 /*
4721d8c5 2543 add2 += "\n // Dirty hack for TRD reference data \n";
2544 add2 += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2545 add2 += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2546 add2 += "\"); \n";
bbb42949 2547 */
4721d8c5 2548 }
2549 add2 += "// BKC \n\n";
2550 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2551 st2.Insert(index,add.Data());
2552
2553
2554 if(kUseDebug){
23adcac8 2555 // st2.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
4721d8c5 2556 }
2557
2558 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
46534866 2559 index = st2.Index("gSystem->AddIncludePath(\"-I$"); // uncomment $ALICE_ROOT include for par files
4721d8c5 2560 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2561 st2.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2562 }
2563
2564 // do not exclude the extra files from merign, this is done explicitly in this train script
92d850d5 2565 // index = st2.Index("mergeExcludes +="); // uncommen $ALICE_ROOT include for par files
2566 // if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2567 // st2.Insert(index,"// CKB comment out, handled explicitly by the train macro \n //");
4721d8c5 2568
2569
2570 ofstream out2;
2571 out2.open(Form("%s_merge.C", kTrainName.Data()));
2572 if (out2.bad()) {
2573 return kFALSE;
2574 }
2575 out2 << st2 << endl;
2576 Printf("<<< Patching Merging Macro");
2577
2578
2579
c38e3b95 2580 return kTRUE;
2581
2582}