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AliAlignObjAngles becomes AliAlignObjParams (Raffaele)
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596a855f 1/**************************************************************************
2 * Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. *
3 * *
4 * Author: The ALICE Off-line Project. *
5 * Contributors are mentioned in the code where appropriate. *
6 * *
7 * Permission to use, copy, modify and distribute this software and its *
8 * documentation strictly for non-commercial purposes is hereby granted *
9 * without fee, provided that the above copyright notice appears in all *
10 * copies and that both the copyright notice and this permission notice *
11 * appear in the supporting documentation. The authors make no claims *
12 * about the suitability of this software for any purpose. It is *
13 * provided "as is" without express or implied warranty. *
14 **************************************************************************/
15
16/* $Id$ */
17
18///////////////////////////////////////////////////////////////////////////////
19// //
20// class for running the reconstruction //
21// //
22// Clusters and tracks are created for all detectors and all events by //
23// typing: //
24// //
25// AliReconstruction rec; //
26// rec.Run(); //
27// //
28// The Run method returns kTRUE in case of successful execution. //
c71de921 29// //
30// If the input to the reconstruction are not simulated digits but raw data, //
31// this can be specified by an argument of the Run method or by the method //
32// //
33// rec.SetInput("..."); //
34// //
35// The input formats and the corresponding argument are: //
36// - DDL raw data files: directory name, ends with "/" //
37// - raw data root file: root file name, extension ".root" //
38// - raw data DATE file: DATE file name, any other non-empty string //
39// - MC root files : empty string, default //
40// //
b26c3770 41// By default all events are reconstructed. The reconstruction can be //
42// limited to a range of events by giving the index of the first and the //
43// last event as an argument to the Run method or by calling //
44// //
45// rec.SetEventRange(..., ...); //
46// //
47// The index -1 (default) can be used for the last event to indicate no //
48// upper limit of the event range. //
49// //
973388c2 50// In case of raw-data reconstruction the user can modify the default //
51// number of events per digits/clusters/tracks file. In case the option //
52// is not used the number is set 1. In case the user provides 0, than //
53// the number of events is equal to the number of events inside the //
54// raw-data file (i.e. one digits/clusters/tracks file): //
55// //
56// rec.SetNumberOfEventsPerFile(...); //
57// //
58// //
596a855f 59// The name of the galice file can be changed from the default //
e583c30d 60// "galice.root" by passing it as argument to the AliReconstruction //
61// constructor or by //
596a855f 62// //
63// rec.SetGAliceFile("..."); //
64// //
59697224 65// The local reconstruction can be switched on or off for individual //
66// detectors by //
596a855f 67// //
59697224 68// rec.SetRunLocalReconstruction("..."); //
596a855f 69// //
70// The argument is a (case sensitive) string with the names of the //
71// detectors separated by a space. The special string "ALL" selects all //
72// available detectors. This is the default. //
73// //
c71de921 74// The reconstruction of the primary vertex position can be switched off by //
75// //
76// rec.SetRunVertexFinder(kFALSE); //
77// //
b8cd5251 78// The tracking and the creation of ESD tracks can be switched on for //
79// selected detectors by //
596a855f 80// //
b8cd5251 81// rec.SetRunTracking("..."); //
596a855f 82// //
c84a5e9e 83// Uniform/nonuniform field tracking switches (default: uniform field) //
84// //
1d99986f 85// rec.SetUniformFieldTracking(); ( rec.SetUniformFieldTracking(kFALSE); ) //
c84a5e9e 86// //
596a855f 87// The filling of additional ESD information can be steered by //
88// //
89// rec.SetFillESD("..."); //
90// //
b8cd5251 91// Again, for both methods the string specifies the list of detectors. //
92// The default is "ALL". //
93// //
94// The call of the shortcut method //
95// //
96// rec.SetRunReconstruction("..."); //
97// //
98// is equivalent to calling SetRunLocalReconstruction, SetRunTracking and //
99// SetFillESD with the same detector selecting string as argument. //
596a855f 100// //
c71de921 101// The reconstruction requires digits or raw data as input. For the creation //
102// of digits and raw data have a look at the class AliSimulation. //
596a855f 103// //
24f7a148 104// For debug purposes the method SetCheckPointLevel can be used. If the //
105// argument is greater than 0, files with ESD events will be written after //
106// selected steps of the reconstruction for each event: //
107// level 1: after tracking and after filling of ESD (final) //
108// level 2: in addition after each tracking step //
109// level 3: in addition after the filling of ESD for each detector //
110// If a final check point file exists for an event, this event will be //
111// skipped in the reconstruction. The tracking and the filling of ESD for //
112// a detector will be skipped as well, if the corresponding check point //
113// file exists. The ESD event will then be loaded from the file instead. //
114// //
596a855f 115///////////////////////////////////////////////////////////////////////////////
116
024a7e64 117#include <TArrayF.h>
118#include <TFile.h>
119#include <TSystem.h>
120#include <TROOT.h>
121#include <TPluginManager.h>
3103d196 122#include <TGeoManager.h>
2bdb9d38 123#include <TLorentzVector.h>
596a855f 124
125#include "AliReconstruction.h"
87932dab 126#include "AliCodeTimer.h"
b8cd5251 127#include "AliReconstructor.h"
815c2b38 128#include "AliLog.h"
596a855f 129#include "AliRunLoader.h"
130#include "AliRun.h"
b649205a 131#include "AliRawReaderFile.h"
132#include "AliRawReaderDate.h"
133#include "AliRawReaderRoot.h"
001397cd 134#include "AliRawEventHeaderBase.h"
af885e0f 135#include "AliESDEvent.h"
faffd83e 136#include "AliESDMuonTrack.h"
1d99986f 137#include "AliESDfriend.h"
2257f27e 138#include "AliESDVertex.h"
faffd83e 139#include "AliESDcascade.h"
140#include "AliESDkink.h"
141#include "AliESDtrack.h"
142#include "AliESDCaloCluster.h"
32e449be 143#include "AliMultiplicity.h"
c84a5e9e 144#include "AliTracker.h"
2257f27e 145#include "AliVertexer.h"
c5e3e5d1 146#include "AliVertexerTracks.h"
5e4ff34d 147#include "AliV0vertexer.h"
148#include "AliCascadeVertexer.h"
596a855f 149#include "AliHeader.h"
150#include "AliGenEventHeader.h"
b26c3770 151#include "AliPID.h"
596a855f 152#include "AliESDpid.h"
ff8bb5ae 153#include "AliESDtrack.h"
f3a97c86 154
08e1a23e 155#include "AliESDTagCreator.h"
a1069ee1 156#include "AliAODTagCreator.h"
f3a97c86 157
25be1e5c 158#include "AliGeomManager.h"
98937d93 159#include "AliTrackPointArray.h"
b0314964 160#include "AliCDBManager.h"
6bae477a 161#include "AliCDBEntry.h"
162#include "AliAlignObj.h"
f3a97c86 163
b647652d 164#include "AliCentralTrigger.h"
165#include "AliCTPRawStream.h"
166
f29f1726 167#include "AliAODEvent.h"
168#include "AliAODHeader.h"
169#include "AliAODTrack.h"
170#include "AliAODVertex.h"
171#include "AliAODCluster.h"
172
a5fa6165 173#include "AliQualAssDataMaker.h"
f29f1726 174
596a855f 175ClassImp(AliReconstruction)
176
177
c757bafd 178//_____________________________________________________________________________
b384f8a4 179const char* AliReconstruction::fgkDetectorName[AliReconstruction::fgkNDetectors] = {"ITS", "TPC", "TRD", "TOF", "PHOS", "HMPID", "EMCAL", "MUON", "FMD", "ZDC", "PMD", "T0", "VZERO", "ACORDE", "HLT"};
c757bafd 180
596a855f 181//_____________________________________________________________________________
024cf675 182AliReconstruction::AliReconstruction(const char* gAliceFilename, const char* cdbUri,
e583c30d 183 const char* name, const char* title) :
184 TNamed(name, title),
185
c84a5e9e 186 fUniformField(kTRUE),
2257f27e 187 fRunVertexFinder(kTRUE),
1f46a9ae 188 fRunHLTTracking(kFALSE),
e66fbafb 189 fRunMuonTracking(kFALSE),
1d99986f 190 fStopOnError(kFALSE),
191 fWriteAlignmentData(kFALSE),
d64bd07d 192 fCleanESD(kTRUE),
1d99986f 193 fWriteESDfriend(kFALSE),
a7807689 194 fWriteAOD(kFALSE),
b647652d 195 fFillTriggerESD(kTRUE),
1d99986f 196
197 fRunLocalReconstruction("ALL"),
b8cd5251 198 fRunTracking("ALL"),
e583c30d 199 fFillESD("ALL"),
200 fGAliceFileName(gAliceFilename),
b649205a 201 fInput(""),
35042093 202 fEquipIdMap(""),
b26c3770 203 fFirstEvent(0),
204 fLastEvent(-1),
973388c2 205 fNumberOfEventsPerFile(1),
24f7a148 206 fCheckPointLevel(0),
b8cd5251 207 fOptions(),
6bae477a 208 fLoadAlignFromCDB(kTRUE),
209 fLoadAlignData("ALL"),
46698ae4 210 fESDPar(""),
e583c30d 211
212 fRunLoader(NULL),
b649205a 213 fRawReader(NULL),
b8cd5251 214
98937d93 215 fVertexer(NULL),
9178838a 216 fDiamondProfile(NULL),
98937d93 217
6bae477a 218 fAlignObjArray(NULL),
ec92bee0 219 fCDBUri(cdbUri),
220 fSpecCDBUri()
596a855f 221{
222// create reconstruction object with default parameters
b8cd5251 223
224 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
225 fReconstructor[iDet] = NULL;
226 fLoader[iDet] = NULL;
227 fTracker[iDet] = NULL;
d101408a 228 fQualAssDataMaker[iDet] = NULL;
b8cd5251 229 }
e47c4c2e 230 AliPID pid;
596a855f 231}
232
233//_____________________________________________________________________________
234AliReconstruction::AliReconstruction(const AliReconstruction& rec) :
e583c30d 235 TNamed(rec),
236
c84a5e9e 237 fUniformField(rec.fUniformField),
2257f27e 238 fRunVertexFinder(rec.fRunVertexFinder),
1f46a9ae 239 fRunHLTTracking(rec.fRunHLTTracking),
e66fbafb 240 fRunMuonTracking(rec.fRunMuonTracking),
1d99986f 241 fStopOnError(rec.fStopOnError),
242 fWriteAlignmentData(rec.fWriteAlignmentData),
d64bd07d 243 fCleanESD(rec.fCleanESD),
1d99986f 244 fWriteESDfriend(rec.fWriteESDfriend),
a7807689 245 fWriteAOD(rec.fWriteAOD),
b647652d 246 fFillTriggerESD(rec.fFillTriggerESD),
1d99986f 247
248 fRunLocalReconstruction(rec.fRunLocalReconstruction),
e583c30d 249 fRunTracking(rec.fRunTracking),
250 fFillESD(rec.fFillESD),
251 fGAliceFileName(rec.fGAliceFileName),
b649205a 252 fInput(rec.fInput),
35042093 253 fEquipIdMap(rec.fEquipIdMap),
b26c3770 254 fFirstEvent(rec.fFirstEvent),
255 fLastEvent(rec.fLastEvent),
973388c2 256 fNumberOfEventsPerFile(rec.fNumberOfEventsPerFile),
24f7a148 257 fCheckPointLevel(0),
b8cd5251 258 fOptions(),
6bae477a 259 fLoadAlignFromCDB(rec.fLoadAlignFromCDB),
260 fLoadAlignData(rec.fLoadAlignData),
46698ae4 261 fESDPar(rec.fESDPar),
e583c30d 262
263 fRunLoader(NULL),
b649205a 264 fRawReader(NULL),
b8cd5251 265
98937d93 266 fVertexer(NULL),
9178838a 267 fDiamondProfile(NULL),
98937d93 268
6bae477a 269 fAlignObjArray(rec.fAlignObjArray),
ec92bee0 270 fCDBUri(rec.fCDBUri),
271 fSpecCDBUri()
596a855f 272{
273// copy constructor
274
ec92bee0 275 for (Int_t i = 0; i < rec.fOptions.GetEntriesFast(); i++) {
efd2085e 276 if (rec.fOptions[i]) fOptions.Add(rec.fOptions[i]->Clone());
277 }
b8cd5251 278 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
279 fReconstructor[iDet] = NULL;
280 fLoader[iDet] = NULL;
281 fTracker[iDet] = NULL;
d101408a 282 fQualAssDataMaker[iDet] = NULL;
b8cd5251 283 }
ec92bee0 284 for (Int_t i = 0; i < rec.fSpecCDBUri.GetEntriesFast(); i++) {
285 if (rec.fSpecCDBUri[i]) fSpecCDBUri.Add(rec.fSpecCDBUri[i]->Clone());
286 }
596a855f 287}
288
289//_____________________________________________________________________________
290AliReconstruction& AliReconstruction::operator = (const AliReconstruction& rec)
291{
292// assignment operator
293
294 this->~AliReconstruction();
295 new(this) AliReconstruction(rec);
296 return *this;
297}
298
299//_____________________________________________________________________________
300AliReconstruction::~AliReconstruction()
301{
302// clean up
303
e583c30d 304 CleanUp();
efd2085e 305 fOptions.Delete();
ec92bee0 306 fSpecCDBUri.Delete();
87932dab 307
308 AliCodeTimer::Instance()->Print();
596a855f 309}
310
024cf675 311//_____________________________________________________________________________
312void AliReconstruction::InitCDBStorage()
313{
314// activate a default CDB storage
315// First check if we have any CDB storage set, because it is used
316// to retrieve the calibration and alignment constants
317
318 AliCDBManager* man = AliCDBManager::Instance();
ec92bee0 319 if (man->IsDefaultStorageSet())
024cf675 320 {
321 AliWarning("!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!");
ec92bee0 322 AliWarning("Default CDB storage has been already set !");
323 AliWarning(Form("Ignoring the default storage declared in AliReconstruction: %s",fCDBUri.Data()));
024cf675 324 AliWarning("!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!");
ec92bee0 325 fCDBUri = "";
326 }
327 else {
b8ec52f6 328 AliDebug(2, "!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!");
329 AliDebug(2, Form("Default CDB storage is set to: %s",fCDBUri.Data()));
330 AliDebug(2, "!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!");
ec92bee0 331 man->SetDefaultStorage(fCDBUri);
332 }
333
334 // Now activate the detector specific CDB storage locations
c3a7b59a 335 for (Int_t i = 0; i < fSpecCDBUri.GetEntriesFast(); i++) {
336 TObject* obj = fSpecCDBUri[i];
337 if (!obj) continue;
b8ec52f6 338 AliDebug(2, "!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!");
339 AliDebug(2, Form("Specific CDB storage for %s is set to: %s",obj->GetName(),obj->GetTitle()));
340 AliDebug(2, "!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!");
c3a7b59a 341 man->SetSpecificStorage(obj->GetName(), obj->GetTitle());
ec92bee0 342 }
727d0766 343 man->Print();
024cf675 344}
345
346//_____________________________________________________________________________
347void AliReconstruction::SetDefaultStorage(const char* uri) {
ec92bee0 348// Store the desired default CDB storage location
349// Activate it later within the Run() method
024cf675 350
ec92bee0 351 fCDBUri = uri;
024cf675 352
353}
354
355//_____________________________________________________________________________
c3a7b59a 356void AliReconstruction::SetSpecificStorage(const char* calibType, const char* uri) {
ec92bee0 357// Store a detector-specific CDB storage location
358// Activate it later within the Run() method
024cf675 359
c3a7b59a 360 AliCDBPath aPath(calibType);
361 if(!aPath.IsValid()){
362 // if calibType is not wildcard but it is a valid detector, add "/*" to make it a valid path
363 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
364 if(!strcmp(calibType, fgkDetectorName[iDet])) {
365 aPath.SetPath(Form("%s/*", calibType));
366 AliInfo(Form("Path for specific storage set to %s", aPath.GetPath().Data()));
367 break;
368 }
369 }
370 if(!aPath.IsValid()){
371 AliError(Form("Not a valid path or detector: %s", calibType));
372 return;
373 }
374 }
375
376 // check that calibType refers to a "valid" detector name
377 Bool_t isDetector = kFALSE;
378 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
379 TString detName = fgkDetectorName[iDet];
380 if(aPath.GetLevel0() == detName) {
381 isDetector = kTRUE;
382 break;
383 }
384 }
385
386 if(!isDetector) {
387 AliError(Form("Not a valid detector: %s", aPath.GetLevel0().Data()));
388 return;
389 }
390
391 TObject* obj = fSpecCDBUri.FindObject(aPath.GetPath().Data());
ec92bee0 392 if (obj) fSpecCDBUri.Remove(obj);
c3a7b59a 393 fSpecCDBUri.Add(new TNamed(aPath.GetPath().Data(), uri));
024cf675 394
395}
396
46698ae4 397
398
399
6bae477a 400//_____________________________________________________________________________
401Bool_t AliReconstruction::SetRunNumber()
402{
403 // The method is called in Run() in order
404 // to set a correct run number.
405 // In case of raw data reconstruction the
406 // run number is taken from the raw data header
407
408 if(AliCDBManager::Instance()->GetRun() < 0) {
409 if (!fRunLoader) {
410 AliError("No run loader is found !");
411 return kFALSE;
412 }
413 // read run number from gAlice
ec92bee0 414 if(fRunLoader->GetAliRun())
415 AliCDBManager::Instance()->SetRun(fRunLoader->GetAliRun()->GetRunNumber());
416 else {
417 if(fRawReader) {
418 if(fRawReader->NextEvent()) {
419 AliCDBManager::Instance()->SetRun(fRawReader->GetRunNumber());
420 fRawReader->RewindEvents();
421 }
422 else {
423 AliError("No raw-data events found !");
424 return kFALSE;
425 }
426 }
427 else {
428 AliError("Neither gAlice nor RawReader objects are found !");
429 return kFALSE;
430 }
431 }
432 AliInfo(Form("CDB Run number: %d",AliCDBManager::Instance()->GetRun()));
6bae477a 433 }
434 return kTRUE;
435}
436
6bae477a 437//_____________________________________________________________________________
438Bool_t AliReconstruction::MisalignGeometry(const TString& detectors)
439{
440 // Read the alignment objects from CDB.
441 // Each detector is supposed to have the
442 // alignment objects in DET/Align/Data CDB path.
443 // All the detector objects are then collected,
444 // sorted by geometry level (starting from ALIC) and
445 // then applied to the TGeo geometry.
446 // Finally an overlaps check is performed.
447
448 // Load alignment data from CDB and fill fAlignObjArray
449 if(fLoadAlignFromCDB){
6bae477a 450
25be1e5c 451 TString detStr = detectors;
452 TString loadAlObjsListOfDets = "";
453
454 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
455 if (!IsSelected(fgkDetectorName[iDet], detStr)) continue;
456 loadAlObjsListOfDets += fgkDetectorName[iDet];
457 loadAlObjsListOfDets += " ";
458 } // end loop over detectors
98e303d9 459 AliGeomManager::ApplyAlignObjsFromCDB(loadAlObjsListOfDets.Data());
25be1e5c 460 }else{
461 // Check if the array with alignment objects was
462 // provided by the user. If yes, apply the objects
463 // to the present TGeo geometry
464 if (fAlignObjArray) {
465 if (gGeoManager && gGeoManager->IsClosed()) {
98e303d9 466 if (AliGeomManager::ApplyAlignObjsToGeom(*fAlignObjArray) == kFALSE) {
25be1e5c 467 AliError("The misalignment of one or more volumes failed!"
468 "Compare the list of simulated detectors and the list of detector alignment data!");
469 return kFALSE;
470 }
471 }
472 else {
473 AliError("Can't apply the misalignment! gGeoManager doesn't exist or it is still opened!");
6bae477a 474 return kFALSE;
475 }
476 }
6bae477a 477 }
25be1e5c 478
8e245d15 479 delete fAlignObjArray; fAlignObjArray=0;
a03b0371 480
6bae477a 481 return kTRUE;
482}
596a855f 483
484//_____________________________________________________________________________
485void AliReconstruction::SetGAliceFile(const char* fileName)
486{
487// set the name of the galice file
488
489 fGAliceFileName = fileName;
490}
491
efd2085e 492//_____________________________________________________________________________
493void AliReconstruction::SetOption(const char* detector, const char* option)
494{
495// set options for the reconstruction of a detector
496
497 TObject* obj = fOptions.FindObject(detector);
498 if (obj) fOptions.Remove(obj);
499 fOptions.Add(new TNamed(detector, option));
500}
501
596a855f 502
503//_____________________________________________________________________________
4a33489c 504Bool_t AliReconstruction::Run(const char* input)
596a855f 505{
506// run the reconstruction
507
87932dab 508 AliCodeTimerAuto("")
509
b649205a 510 // set the input
511 if (!input) input = fInput.Data();
512 TString fileName(input);
513 if (fileName.EndsWith("/")) {
514 fRawReader = new AliRawReaderFile(fileName);
515 } else if (fileName.EndsWith(".root")) {
516 fRawReader = new AliRawReaderRoot(fileName);
517 } else if (!fileName.IsNull()) {
518 fRawReader = new AliRawReaderDate(fileName);
519 fRawReader->SelectEvents(7);
520 }
35042093 521 if (!fEquipIdMap.IsNull() && fRawReader)
522 fRawReader->LoadEquipmentIdsMap(fEquipIdMap);
523
b649205a 524
f08fc9f5 525 // get the run loader
526 if (!InitRunLoader()) return kFALSE;
596a855f 527
ec92bee0 528 // Initialize the CDB storage
529 InitCDBStorage();
530
6bae477a 531 // Set run number in CDBManager (if it is not already set by the user)
532 if (!SetRunNumber()) if (fStopOnError) return kFALSE;
533
534 // Import ideal TGeo geometry and apply misalignment
535 if (!gGeoManager) {
536 TString geom(gSystem->DirName(fGAliceFileName));
537 geom += "/geometry.root";
98e303d9 538 AliGeomManager::LoadGeometry(geom.Data());
6bae477a 539 if (!gGeoManager) if (fStopOnError) return kFALSE;
540 }
8e245d15 541
542 AliCDBManager* man = AliCDBManager::Instance();
6bae477a 543 if (!MisalignGeometry(fLoadAlignData)) if (fStopOnError) return kFALSE;
544
596a855f 545 // local reconstruction
59697224 546 if (!fRunLocalReconstruction.IsNull()) {
547 if (!RunLocalReconstruction(fRunLocalReconstruction)) {
e583c30d 548 if (fStopOnError) {CleanUp(); return kFALSE;}
596a855f 549 }
550 }
b26c3770 551// if (!fRunVertexFinder && fRunTracking.IsNull() &&
552// fFillESD.IsNull()) return kTRUE;
2257f27e 553
554 // get vertexer
555 if (fRunVertexFinder && !CreateVertexer()) {
556 if (fStopOnError) {
557 CleanUp();
558 return kFALSE;
559 }
560 }
596a855f 561
f08fc9f5 562 // get trackers
b8cd5251 563 if (!fRunTracking.IsNull() && !CreateTrackers(fRunTracking)) {
24f7a148 564 if (fStopOnError) {
565 CleanUp();
566 return kFALSE;
567 }
596a855f 568 }
24f7a148 569
b26c3770 570 // get the possibly already existing ESD file and tree
af885e0f 571 AliESDEvent* esd = new AliESDEvent(); AliESDEvent* hltesd = new AliESDEvent();
b26c3770 572 TFile* fileOld = NULL;
1f46a9ae 573 TTree* treeOld = NULL; TTree *hlttreeOld = NULL;
b26c3770 574 if (!gSystem->AccessPathName("AliESDs.root")){
575 gSystem->CopyFile("AliESDs.root", "AliESDs.old.root", kTRUE);
576 fileOld = TFile::Open("AliESDs.old.root");
577 if (fileOld && fileOld->IsOpen()) {
578 treeOld = (TTree*) fileOld->Get("esdTree");
46698ae4 579 if (treeOld)esd->ReadFromTree(treeOld);
1f46a9ae 580 hlttreeOld = (TTree*) fileOld->Get("HLTesdTree");
46698ae4 581 if (hlttreeOld) hltesd->ReadFromTree(hlttreeOld);
b26c3770 582 }
583 }
584
36711aa4 585 // create the ESD output file and tree
596a855f 586 TFile* file = TFile::Open("AliESDs.root", "RECREATE");
46698ae4 587 file->SetCompressionLevel(2);
596a855f 588 if (!file->IsOpen()) {
815c2b38 589 AliError("opening AliESDs.root failed");
b26c3770 590 if (fStopOnError) {CleanUp(file, fileOld); return kFALSE;}
596a855f 591 }
46698ae4 592
36711aa4 593 TTree* tree = new TTree("esdTree", "Tree with ESD objects");
af885e0f 594 esd = new AliESDEvent();
46698ae4 595 esd->CreateStdContent();
596 esd->WriteToTree(tree);
597
1f46a9ae 598 TTree* hlttree = new TTree("HLTesdTree", "Tree with HLT ESD objects");
af885e0f 599 hltesd = new AliESDEvent();
46698ae4 600 hltesd->CreateStdContent();
601 hltesd->WriteToTree(hlttree);
602
603 /* CKB Why?
1f46a9ae 604 delete esd; delete hltesd;
605 esd = NULL; hltesd = NULL;
46698ae4 606 */
500d54ab 607 // create the branch with ESD additions
5728d3d5 608
609
610
46698ae4 611 AliESDfriend *esdf = 0;
1d99986f 612 if (fWriteESDfriend) {
46698ae4 613 esdf = new AliESDfriend();
614 TBranch *br=tree->Branch("ESDfriend.","AliESDfriend", &esdf);
615 br->SetFile("AliESDfriends.root");
616 esd->AddObject(esdf);
1d99986f 617 }
5728d3d5 618
46698ae4 619
17c86e90 620 // Get the diamond profile from OCDB
621 AliCDBEntry* entry = AliCDBManager::Instance()
622 ->Get("GRP/Calib/MeanVertex");
623
624 if(entry) {
625 fDiamondProfile = dynamic_cast<AliESDVertex*> (entry->GetObject());
626 } else {
627 AliError("No diamond profile found in OCDB!");
628 }
629
20e5681c 630 AliVertexerTracks tVertexer(AliTracker::GetBz());
9178838a 631 if(fDiamondProfile) tVertexer.SetVtxStart(fDiamondProfile);
c5e3e5d1 632
596a855f 633 // loop over events
a5fa6165 634
b649205a 635 if (fRawReader) fRawReader->RewindEvents();
a5fa6165 636 TString detStr(fFillESD) ;
637
638// initialises quality assurance for ESDs
639 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
640 if (!IsSelected(fgkDetectorName[iDet], detStr))
641 continue;
642 AliQualAssDataMaker * qadm = GetQualAssDataMaker(iDet);
643 if (!qadm)
644 continue;
645 qadm->Init(AliQualAss::kESDS) ;
646 }
f08fc9f5 647
596a855f 648 for (Int_t iEvent = 0; iEvent < fRunLoader->GetNumberOfEvents(); iEvent++) {
b26c3770 649 if (fRawReader) fRawReader->NextEvent();
4a33489c 650 if ((iEvent < fFirstEvent) || ((fLastEvent >= 0) && (iEvent > fLastEvent))) {
b26c3770 651 // copy old ESD to the new one
652 if (treeOld) {
46698ae4 653 esd->ReadFromTree(treeOld);
b26c3770 654 treeOld->GetEntry(iEvent);
655 }
656 tree->Fill();
1f46a9ae 657 if (hlttreeOld) {
46698ae4 658 esd->ReadFromTree(hlttreeOld);
1f46a9ae 659 hlttreeOld->GetEntry(iEvent);
660 }
661 hlttree->Fill();
b26c3770 662 continue;
663 }
46698ae4 664
815c2b38 665 AliInfo(Form("processing event %d", iEvent));
596a855f 666 fRunLoader->GetEvent(iEvent);
24f7a148 667
bb0901a4 668 char aFileName[256];
669 sprintf(aFileName, "ESD_%d.%d_final.root",
f08fc9f5 670 fRunLoader->GetHeader()->GetRun(),
671 fRunLoader->GetHeader()->GetEventNrInRun());
bb0901a4 672 if (!gSystem->AccessPathName(aFileName)) continue;
24f7a148 673
b26c3770 674 // local reconstruction
675 if (!fRunLocalReconstruction.IsNull()) {
676 if (!RunLocalEventReconstruction(fRunLocalReconstruction)) {
677 if (fStopOnError) {CleanUp(file, fileOld); return kFALSE;}
678 }
679 }
680
46698ae4 681
f08fc9f5 682 esd->SetRunNumber(fRunLoader->GetHeader()->GetRun());
1f46a9ae 683 hltesd->SetRunNumber(fRunLoader->GetHeader()->GetRun());
31fd97b2 684 esd->SetEventNumberInFile(fRunLoader->GetHeader()->GetEventNrInRun());
685 hltesd->SetEventNumberInFile(fRunLoader->GetHeader()->GetEventNrInRun());
46698ae4 686
d6ee376f 687 // Set magnetic field from the tracker
688 esd->SetMagneticField(AliTracker::GetBz());
689 hltesd->SetMagneticField(AliTracker::GetBz());
596a855f 690
46698ae4 691
692
2e3550da 693 // Fill raw-data error log into the ESD
694 if (fRawReader) FillRawDataErrorLog(iEvent,esd);
695
2257f27e 696 // vertex finder
697 if (fRunVertexFinder) {
698 if (!ReadESD(esd, "vertex")) {
699 if (!RunVertexFinder(esd)) {
b26c3770 700 if (fStopOnError) {CleanUp(file, fileOld); return kFALSE;}
2257f27e 701 }
702 if (fCheckPointLevel > 0) WriteESD(esd, "vertex");
703 }
704 }
705
1f46a9ae 706 // HLT tracking
707 if (!fRunTracking.IsNull()) {
708 if (fRunHLTTracking) {
709 hltesd->SetVertex(esd->GetVertex());
710 if (!RunHLTTracking(hltesd)) {
711 if (fStopOnError) {CleanUp(file, fileOld); return kFALSE;}
712 }
713 }
714 }
715
e66fbafb 716 // Muon tracking
b8cd5251 717 if (!fRunTracking.IsNull()) {
e66fbafb 718 if (fRunMuonTracking) {
761350a6 719 if (!RunMuonTracking(esd)) {
b26c3770 720 if (fStopOnError) {CleanUp(file, fileOld); return kFALSE;}
24f7a148 721 }
596a855f 722 }
723 }
724
e66fbafb 725 // barrel tracking
726 if (!fRunTracking.IsNull()) {
21c573b7 727 if (!ReadESD(esd, "tracking")) {
728 if (!RunTracking(esd)) {
729 if (fStopOnError) {CleanUp(file, fileOld); return kFALSE;}
e66fbafb 730 }
21c573b7 731 if (fCheckPointLevel > 0) WriteESD(esd, "tracking");
e66fbafb 732 }
733 }
21c573b7 734
596a855f 735 // fill ESD
736 if (!fFillESD.IsNull()) {
737 if (!FillESD(esd, fFillESD)) {
b26c3770 738 if (fStopOnError) {CleanUp(file, fileOld); return kFALSE;}
596a855f 739 }
740 }
a5fa6165 741
742 if (!fFillESD.IsNull())
743 RunQualAss(fFillESD.Data(), esd);
744
001397cd 745 // fill Event header information from the RawEventHeader
746 if (fRawReader){FillRawEventHeaderESD(esd);}
596a855f 747
748 // combined PID
749 AliESDpid::MakePID(esd);
24f7a148 750 if (fCheckPointLevel > 1) WriteESD(esd, "PID");
596a855f 751
b647652d 752 if (fFillTriggerESD) {
753 if (!ReadESD(esd, "trigger")) {
754 if (!FillTriggerESD(esd)) {
755 if (fStopOnError) {CleanUp(file, fileOld); return kFALSE;}
756 }
757 if (fCheckPointLevel > 1) WriteESD(esd, "trigger");
758 }
759 }
760
a03cd2e0 761 //Try to improve the reconstructed primary vertex position using the tracks
c060d7fe 762 AliESDVertex *pvtx=0;
763 Bool_t dovertex=kTRUE;
764 TObject* obj = fOptions.FindObject("ITS");
765 if (obj) {
766 TString optITS = obj->GetTitle();
767 if (optITS.Contains("cosmics") || optITS.Contains("COSMICS"))
768 dovertex=kFALSE;
769 }
770 if(dovertex) pvtx=tVertexer.FindPrimaryVertex(esd);
17c86e90 771 if(fDiamondProfile) esd->SetDiamond(fDiamondProfile);
772
a03cd2e0 773 if (pvtx)
774 if (pvtx->GetStatus()) {
775 // Store the improved primary vertex
776 esd->SetPrimaryVertex(pvtx);
777 // Propagate the tracks to the DCA to the improved primary vertex
778 Double_t somethingbig = 777.;
779 Double_t bz = esd->GetMagneticField();
780 Int_t nt=esd->GetNumberOfTracks();
781 while (nt--) {
782 AliESDtrack *t = esd->GetTrack(nt);
783 t->RelateToVertex(pvtx, bz, somethingbig);
784 }
785 }
c5e3e5d1 786
5e4ff34d 787 {
788 // V0 finding
789 AliV0vertexer vtxer;
790 vtxer.Tracks2V0vertices(esd);
791
792 // Cascade finding
793 AliCascadeVertexer cvtxer;
794 cvtxer.V0sTracks2CascadeVertices(esd);
795 }
796
596a855f 797 // write ESD
d64bd07d 798 if (fCleanESD) CleanESD(esd);
1d99986f 799 if (fWriteESDfriend) {
46698ae4 800 new (esdf) AliESDfriend(); // Reset...
801 esd->GetESDfriend(esdf);
1d99986f 802 }
500d54ab 803 tree->Fill();
804
805 // write HLT ESD
806 hlttree->Fill();
1d99986f 807
f3a97c86 808 if (fCheckPointLevel > 0) WriteESD(esd, "final");
46698ae4 809 esd->Reset();
810 hltesd->Reset();
5728d3d5 811 if (fWriteESDfriend) {
812 new (esdf) AliESDfriend(); // Reset...
813 }
46698ae4 814 // esdf->Reset();
815 // delete esdf; esdf = 0;
a5fa6165 816 // ESD QA
817
818 }
819
820 detStr = fFillESD ;
821 // write quality assurance ESDs data (one entry for all events)
822 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
823 if (!IsSelected(fgkDetectorName[iDet], detStr))
824 continue;
825 AliQualAssDataMaker * qadm = GetQualAssDataMaker(iDet);
826 if (!qadm)
827 continue;
828 qadm->Finish(AliQualAss::kESDS) ;
829 }
5728d3d5 830
46698ae4 831 tree->GetUserInfo()->Add(esd);
832 hlttree->GetUserInfo()->Add(hltesd);
833
834
835
836 if(fESDPar.Contains("ESD.par")){
837 AliInfo("Attaching ESD.par to Tree");
838 TNamed *fn = CopyFileToTNamed(fESDPar.Data(),"ESD.par");
839 tree->GetUserInfo()->Add(fn);
596a855f 840 }
841
46698ae4 842
36711aa4 843 file->cd();
a9c0e6db 844 if (fWriteESDfriend)
845 tree->SetBranchStatus("ESDfriend*",0);
36711aa4 846 tree->Write();
1f46a9ae 847 hlttree->Write();
f3a97c86 848
a7807689 849 if (fWriteAOD) {
f29f1726 850 TFile *aodFile = TFile::Open("AliAOD.root", "RECREATE");
851 ESDFile2AODFile(file, aodFile);
852 aodFile->Close();
a7807689 853 }
854
46698ae4 855 gROOT->cd();
151e0c96 856 CleanUp(file, fileOld);
857
f3a97c86 858 // Create tags for the events in the ESD tree (the ESD tree is always present)
859 // In case of empty events the tags will contain dummy values
08e1a23e 860 AliESDTagCreator *esdtagCreator = new AliESDTagCreator();
861 esdtagCreator->CreateESDTags(fFirstEvent,fLastEvent);
a1069ee1 862 if (fWriteAOD) {
863 AliAODTagCreator *aodtagCreator = new AliAODTagCreator();
864 aodtagCreator->CreateAODTags(fFirstEvent,fLastEvent);
865 }
596a855f 866
867 return kTRUE;
868}
869
870
871//_____________________________________________________________________________
59697224 872Bool_t AliReconstruction::RunLocalReconstruction(const TString& detectors)
596a855f 873{
59697224 874// run the local reconstruction
596a855f 875
87932dab 876 AliCodeTimerAuto("")
030b532d 877
8e245d15 878 AliCDBManager* man = AliCDBManager::Instance();
879 Bool_t origCache = man->GetCacheFlag();
880
596a855f 881 TString detStr = detectors;
b8cd5251 882 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
883 if (!IsSelected(fgkDetectorName[iDet], detStr)) continue;
884 AliReconstructor* reconstructor = GetReconstructor(iDet);
885 if (!reconstructor) continue;
b26c3770 886 if (reconstructor->HasLocalReconstruction()) continue;
b8cd5251 887
87932dab 888 AliCodeTimerStart(Form("running reconstruction for %s", fgkDetectorName[iDet]));
b8cd5251 889 AliInfo(Form("running reconstruction for %s", fgkDetectorName[iDet]));
87932dab 890
891 AliCodeTimerStart(Form("Loading calibration data from OCDB for %s", fgkDetectorName[iDet]));
8e245d15 892 AliInfo(Form("Loading calibration data from OCDB for %s", fgkDetectorName[iDet]));
893
894 man->SetCacheFlag(kTRUE);
895 TString calibPath = Form("%s/Calib/*", fgkDetectorName[iDet]);
896 man->GetAll(calibPath); // entries are cached!
897
87932dab 898 AliCodeTimerStop(Form("Loading calibration data from OCDB for %s", fgkDetectorName[iDet]));
899
b8cd5251 900 if (fRawReader) {
901 fRawReader->RewindEvents();
902 reconstructor->Reconstruct(fRunLoader, fRawReader);
903 } else {
904 reconstructor->Reconstruct(fRunLoader);
596a855f 905 }
87932dab 906
907 AliCodeTimerStop(Form("running reconstruction for %s", fgkDetectorName[iDet]));
8e245d15 908
909 // unload calibration data
98e303d9 910 man->UnloadFromCache(calibPath);
911 //man->ClearCache();
596a855f 912 }
913
8e245d15 914 man->SetCacheFlag(origCache);
915
596a855f 916 if ((detStr.CompareTo("ALL") != 0) && !detStr.IsNull()) {
815c2b38 917 AliError(Form("the following detectors were not found: %s",
918 detStr.Data()));
596a855f 919 if (fStopOnError) return kFALSE;
920 }
921
922 return kTRUE;
923}
924
b26c3770 925//_____________________________________________________________________________
926Bool_t AliReconstruction::RunLocalEventReconstruction(const TString& detectors)
927{
928// run the local reconstruction
929
87932dab 930 AliCodeTimerAuto("")
b26c3770 931
932 TString detStr = detectors;
933 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
934 if (!IsSelected(fgkDetectorName[iDet], detStr)) continue;
935 AliReconstructor* reconstructor = GetReconstructor(iDet);
936 if (!reconstructor) continue;
937 AliLoader* loader = fLoader[iDet];
938
939 // conversion of digits
940 if (fRawReader && reconstructor->HasDigitConversion()) {
941 AliInfo(Form("converting raw data digits into root objects for %s",
942 fgkDetectorName[iDet]));
87932dab 943 AliCodeTimerAuto(Form("converting raw data digits into root objects for %s",
944 fgkDetectorName[iDet]));
b26c3770 945 loader->LoadDigits("update");
946 loader->CleanDigits();
947 loader->MakeDigitsContainer();
948 TTree* digitsTree = loader->TreeD();
949 reconstructor->ConvertDigits(fRawReader, digitsTree);
950 loader->WriteDigits("OVERWRITE");
951 loader->UnloadDigits();
b26c3770 952 }
953
954 // local reconstruction
955 if (!reconstructor->HasLocalReconstruction()) continue;
956 AliInfo(Form("running reconstruction for %s", fgkDetectorName[iDet]));
87932dab 957 AliCodeTimerAuto(Form("running reconstruction for %s", fgkDetectorName[iDet]));
b26c3770 958 loader->LoadRecPoints("update");
959 loader->CleanRecPoints();
960 loader->MakeRecPointsContainer();
961 TTree* clustersTree = loader->TreeR();
962 if (fRawReader && !reconstructor->HasDigitConversion()) {
963 reconstructor->Reconstruct(fRawReader, clustersTree);
964 } else {
965 loader->LoadDigits("read");
966 TTree* digitsTree = loader->TreeD();
967 if (!digitsTree) {
968 AliError(Form("Can't get the %s digits tree", fgkDetectorName[iDet]));
969 if (fStopOnError) return kFALSE;
970 } else {
971 reconstructor->Reconstruct(digitsTree, clustersTree);
972 }
973 loader->UnloadDigits();
974 }
975 loader->WriteRecPoints("OVERWRITE");
976 loader->UnloadRecPoints();
b26c3770 977 }
978
979 if ((detStr.CompareTo("ALL") != 0) && !detStr.IsNull()) {
980 AliError(Form("the following detectors were not found: %s",
981 detStr.Data()));
982 if (fStopOnError) return kFALSE;
983 }
5f8272e1 984
b26c3770 985 return kTRUE;
986}
987
596a855f 988//_____________________________________________________________________________
af885e0f 989Bool_t AliReconstruction::RunVertexFinder(AliESDEvent*& esd)
596a855f 990{
991// run the barrel tracking
992
87932dab 993 AliCodeTimerAuto("")
030b532d 994
2257f27e 995 AliESDVertex* vertex = NULL;
996 Double_t vtxPos[3] = {0, 0, 0};
997 Double_t vtxErr[3] = {0.07, 0.07, 0.1};
998 TArrayF mcVertex(3);
a6b0b91b 999 if (fRunLoader->GetHeader() && fRunLoader->GetHeader()->GenEventHeader()) {
1000 fRunLoader->GetHeader()->GenEventHeader()->PrimaryVertex(mcVertex);
1001 for (Int_t i = 0; i < 3; i++) vtxPos[i] = mcVertex[i];
1002 }
2257f27e 1003
b8cd5251 1004 if (fVertexer) {
17c86e90 1005 if(fDiamondProfile) fVertexer->SetVtxStart(fDiamondProfile);
815c2b38 1006 AliInfo("running the ITS vertex finder");
b26c3770 1007 if (fLoader[0]) fLoader[0]->LoadRecPoints();
b8cd5251 1008 vertex = fVertexer->FindVertexForCurrentEvent(fRunLoader->GetEventNumber());
b26c3770 1009 if (fLoader[0]) fLoader[0]->UnloadRecPoints();
2257f27e 1010 if(!vertex){
815c2b38 1011 AliWarning("Vertex not found");
c710f220 1012 vertex = new AliESDVertex();
d1a50cb5 1013 vertex->SetName("default");
2257f27e 1014 }
1015 else {
d1a50cb5 1016 vertex->SetName("reconstructed");
2257f27e 1017 }
1018
1019 } else {
815c2b38 1020 AliInfo("getting the primary vertex from MC");
2257f27e 1021 vertex = new AliESDVertex(vtxPos, vtxErr);
1022 }
1023
1024 if (vertex) {
1025 vertex->GetXYZ(vtxPos);
1026 vertex->GetSigmaXYZ(vtxErr);
1027 } else {
815c2b38 1028 AliWarning("no vertex reconstructed");
2257f27e 1029 vertex = new AliESDVertex(vtxPos, vtxErr);
1030 }
1031 esd->SetVertex(vertex);
32e449be 1032 // if SPD multiplicity has been determined, it is stored in the ESD
25be1e5c 1033 AliMultiplicity *mult = fVertexer->GetMultiplicity();
32e449be 1034 if(mult)esd->SetMultiplicity(mult);
1035
b8cd5251 1036 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
1037 if (fTracker[iDet]) fTracker[iDet]->SetVertex(vtxPos, vtxErr);
1038 }
2257f27e 1039 delete vertex;
1040
2257f27e 1041 return kTRUE;
1042}
1043
1f46a9ae 1044//_____________________________________________________________________________
af885e0f 1045Bool_t AliReconstruction::RunHLTTracking(AliESDEvent*& esd)
1f46a9ae 1046{
1047// run the HLT barrel tracking
1048
87932dab 1049 AliCodeTimerAuto("")
1f46a9ae 1050
1051 if (!fRunLoader) {
1052 AliError("Missing runLoader!");
1053 return kFALSE;
1054 }
1055
1056 AliInfo("running HLT tracking");
1057
1058 // Get a pointer to the HLT reconstructor
1059 AliReconstructor *reconstructor = GetReconstructor(fgkNDetectors-1);
1060 if (!reconstructor) return kFALSE;
1061
1062 // TPC + ITS
1063 for (Int_t iDet = 1; iDet >= 0; iDet--) {
1064 TString detName = fgkDetectorName[iDet];
1065 AliDebug(1, Form("%s HLT tracking", detName.Data()));
1066 reconstructor->SetOption(detName.Data());
1067 AliTracker *tracker = reconstructor->CreateTracker(fRunLoader);
1068 if (!tracker) {
1069 AliWarning(Form("couldn't create a HLT tracker for %s", detName.Data()));
1070 if (fStopOnError) return kFALSE;
9dcc06e1 1071 continue;
1f46a9ae 1072 }
1073 Double_t vtxPos[3];
1074 Double_t vtxErr[3]={0.005,0.005,0.010};
1075 const AliESDVertex *vertex = esd->GetVertex();
1076 vertex->GetXYZ(vtxPos);
1077 tracker->SetVertex(vtxPos,vtxErr);
1078 if(iDet != 1) {
1079 fLoader[iDet]->LoadRecPoints("read");
1080 TTree* tree = fLoader[iDet]->TreeR();
1081 if (!tree) {
1082 AliError(Form("Can't get the %s cluster tree", detName.Data()));
1083 return kFALSE;
1084 }
1085 tracker->LoadClusters(tree);
1086 }
1087 if (tracker->Clusters2Tracks(esd) != 0) {
1088 AliError(Form("HLT %s Clusters2Tracks failed", fgkDetectorName[iDet]));
1089 return kFALSE;
1090 }
1091 if(iDet != 1) {
1092 tracker->UnloadClusters();
1093 }
1094 delete tracker;
1095 }
1096
1f46a9ae 1097 return kTRUE;
1098}
1099
e66fbafb 1100//_____________________________________________________________________________
af885e0f 1101Bool_t AliReconstruction::RunMuonTracking(AliESDEvent*& esd)
e66fbafb 1102{
1103// run the muon spectrometer tracking
1104
87932dab 1105 AliCodeTimerAuto("")
e66fbafb 1106
1107 if (!fRunLoader) {
1108 AliError("Missing runLoader!");
1109 return kFALSE;
1110 }
1111 Int_t iDet = 7; // for MUON
1112
1113 AliInfo("is running...");
1114
1115 // Get a pointer to the MUON reconstructor
1116 AliReconstructor *reconstructor = GetReconstructor(iDet);
1117 if (!reconstructor) return kFALSE;
1118
1119
1120 TString detName = fgkDetectorName[iDet];
1121 AliDebug(1, Form("%s tracking", detName.Data()));
1122 AliTracker *tracker = reconstructor->CreateTracker(fRunLoader);
1123 if (!tracker) {
1124 AliWarning(Form("couldn't create a tracker for %s", detName.Data()));
1125 return kFALSE;
1126 }
1127
1128 // create Tracks
1129 fLoader[iDet]->LoadTracks("update");
1130 fLoader[iDet]->CleanTracks();
1131 fLoader[iDet]->MakeTracksContainer();
1132
1133 // read RecPoints
761350a6 1134 fLoader[iDet]->LoadRecPoints("read");
1135 tracker->LoadClusters(fLoader[iDet]->TreeR());
1136
1137 Int_t rv = tracker->Clusters2Tracks(esd);
1138
1139 fLoader[iDet]->UnloadRecPoints();
1140
1141 if ( rv )
1142 {
e66fbafb 1143 AliError(Form("%s Clusters2Tracks failed", fgkDetectorName[iDet]));
1144 return kFALSE;
1145 }
761350a6 1146
1147 tracker->UnloadClusters();
1148
e66fbafb 1149 fLoader[iDet]->UnloadRecPoints();
1150
1151 fLoader[iDet]->WriteTracks("OVERWRITE");
1152 fLoader[iDet]->UnloadTracks();
1153
1154 delete tracker;
1155
e66fbafb 1156 return kTRUE;
1157}
1158
1159
2257f27e 1160//_____________________________________________________________________________
af885e0f 1161Bool_t AliReconstruction::RunTracking(AliESDEvent*& esd)
2257f27e 1162{
1163// run the barrel tracking
1164
87932dab 1165 AliCodeTimerAuto("")
24f7a148 1166
815c2b38 1167 AliInfo("running tracking");
596a855f 1168
91b876d1 1169 //Fill the ESD with the T0 info (will be used by the TOF)
1f4331b3 1170 if (fReconstructor[11])
1171 GetReconstructor(11)->FillESD(fRunLoader, esd);
91b876d1 1172
b8cd5251 1173 // pass 1: TPC + ITS inwards
1174 for (Int_t iDet = 1; iDet >= 0; iDet--) {
1175 if (!fTracker[iDet]) continue;
1176 AliDebug(1, Form("%s tracking", fgkDetectorName[iDet]));
24f7a148 1177
b8cd5251 1178 // load clusters
1179 fLoader[iDet]->LoadRecPoints("read");
1180 TTree* tree = fLoader[iDet]->TreeR();
1181 if (!tree) {
1182 AliError(Form("Can't get the %s cluster tree", fgkDetectorName[iDet]));
24f7a148 1183 return kFALSE;
1184 }
b8cd5251 1185 fTracker[iDet]->LoadClusters(tree);
1186
1187 // run tracking
1188 if (fTracker[iDet]->Clusters2Tracks(esd) != 0) {
1189 AliError(Form("%s Clusters2Tracks failed", fgkDetectorName[iDet]));
24f7a148 1190 return kFALSE;
1191 }
b8cd5251 1192 if (fCheckPointLevel > 1) {
1193 WriteESD(esd, Form("%s.tracking", fgkDetectorName[iDet]));
1194 }
878e1fe1 1195 // preliminary PID in TPC needed by the ITS tracker
1196 if (iDet == 1) {
1197 GetReconstructor(1)->FillESD(fRunLoader, esd);
b26c3770 1198 GetReconstructor(1)->FillESD((TTree*)NULL, (TTree*)NULL, esd);
878e1fe1 1199 AliESDpid::MakePID(esd);
1200 }
b8cd5251 1201 }
596a855f 1202
b8cd5251 1203 // pass 2: ALL backwards
1204 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
1205 if (!fTracker[iDet]) continue;
1206 AliDebug(1, Form("%s back propagation", fgkDetectorName[iDet]));
1207
1208 // load clusters
1209 if (iDet > 1) { // all except ITS, TPC
1210 TTree* tree = NULL;
7b61cd9c 1211 fLoader[iDet]->LoadRecPoints("read");
1212 tree = fLoader[iDet]->TreeR();
b8cd5251 1213 if (!tree) {
1214 AliError(Form("Can't get the %s cluster tree", fgkDetectorName[iDet]));
24f7a148 1215 return kFALSE;
1216 }
b8cd5251 1217 fTracker[iDet]->LoadClusters(tree);
1218 }
24f7a148 1219
b8cd5251 1220 // run tracking
1221 if (fTracker[iDet]->PropagateBack(esd) != 0) {
1222 AliError(Form("%s backward propagation failed", fgkDetectorName[iDet]));
49dfd67a 1223 // return kFALSE;
b8cd5251 1224 }
1225 if (fCheckPointLevel > 1) {
1226 WriteESD(esd, Form("%s.back", fgkDetectorName[iDet]));
1227 }
24f7a148 1228
b8cd5251 1229 // unload clusters
1230 if (iDet > 2) { // all except ITS, TPC, TRD
1231 fTracker[iDet]->UnloadClusters();
7b61cd9c 1232 fLoader[iDet]->UnloadRecPoints();
b8cd5251 1233 }
8f37df88 1234 // updated PID in TPC needed by the ITS tracker -MI
1235 if (iDet == 1) {
1236 GetReconstructor(1)->FillESD(fRunLoader, esd);
1237 GetReconstructor(1)->FillESD((TTree*)NULL, (TTree*)NULL, esd);
1238 AliESDpid::MakePID(esd);
1239 }
b8cd5251 1240 }
596a855f 1241
98937d93 1242 // write space-points to the ESD in case alignment data output
1243 // is switched on
1244 if (fWriteAlignmentData)
1245 WriteAlignmentData(esd);
1246
b8cd5251 1247 // pass 3: TRD + TPC + ITS refit inwards
1248 for (Int_t iDet = 2; iDet >= 0; iDet--) {
1249 if (!fTracker[iDet]) continue;
1250 AliDebug(1, Form("%s inward refit", fgkDetectorName[iDet]));
596a855f 1251
b8cd5251 1252 // run tracking
1253 if (fTracker[iDet]->RefitInward(esd) != 0) {
1254 AliError(Form("%s inward refit failed", fgkDetectorName[iDet]));
49dfd67a 1255 // return kFALSE;
b8cd5251 1256 }
1257 if (fCheckPointLevel > 1) {
1258 WriteESD(esd, Form("%s.refit", fgkDetectorName[iDet]));
1259 }
596a855f 1260
b8cd5251 1261 // unload clusters
1262 fTracker[iDet]->UnloadClusters();
1263 fLoader[iDet]->UnloadRecPoints();
1264 }
ff8bb5ae 1265 //
1266 // Propagate track to the vertex - if not done by ITS
1267 //
1268 Int_t ntracks = esd->GetNumberOfTracks();
1269 for (Int_t itrack=0; itrack<ntracks; itrack++){
1270 const Double_t kRadius = 3; // beam pipe radius
1271 const Double_t kMaxStep = 5; // max step
1272 const Double_t kMaxD = 123456; // max distance to prim vertex
1273 Double_t fieldZ = AliTracker::GetBz(); //
1274 AliESDtrack * track = esd->GetTrack(itrack);
1275 if (!track) continue;
1276 if (track->IsOn(AliESDtrack::kITSrefit)) continue;
a7265806 1277 AliTracker::PropagateTrackTo(track,kRadius,track->GetMass(),kMaxStep,kTRUE);
ff8bb5ae 1278 track->RelateToVertex(esd->GetVertex(),fieldZ, kMaxD);
1279 }
1280
596a855f 1281 return kTRUE;
1282}
1283
d64bd07d 1284//_____________________________________________________________________________
1285Bool_t AliReconstruction::CleanESD(AliESDEvent *esd){
1286 //
1287 // Remove the data which are not needed for the physics analysis.
1288 //
1289
1290 AliInfo("Cleaning the ESD...");
1291
1292 const AliESDVertex *vertex=esd->GetVertex();
1293 Double_t vz=vertex->GetZv();
1294
1295 Int_t nTracks=esd->GetNumberOfTracks();
1296 for (Int_t i=0; i<nTracks; i++) {
1297 AliESDtrack *track=esd->GetTrack(i);
1298
1299 Float_t xy,z; track->GetImpactParameters(xy,z);
1300 if (TMath::Abs(xy) < 50.) continue;
1301 if (vertex->GetStatus())
1302 if (TMath::Abs(vz-z) < 5.) continue;
1303
1304 esd->RemoveTrack(i);
1305 }
1306
1307 return kTRUE;
1308}
1309
596a855f 1310//_____________________________________________________________________________
af885e0f 1311Bool_t AliReconstruction::FillESD(AliESDEvent*& esd, const TString& detectors)
596a855f 1312{
1313// fill the event summary data
1314
87932dab 1315 AliCodeTimerAuto("")
030b532d 1316
596a855f 1317 TString detStr = detectors;
b8cd5251 1318 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
1319 if (!IsSelected(fgkDetectorName[iDet], detStr)) continue;
1320 AliReconstructor* reconstructor = GetReconstructor(iDet);
1321 if (!reconstructor) continue;
1322
1323 if (!ReadESD(esd, fgkDetectorName[iDet])) {
1324 AliDebug(1, Form("filling ESD for %s", fgkDetectorName[iDet]));
b26c3770 1325 TTree* clustersTree = NULL;
1326 if (reconstructor->HasLocalReconstruction() && fLoader[iDet]) {
1327 fLoader[iDet]->LoadRecPoints("read");
1328 clustersTree = fLoader[iDet]->TreeR();
1329 if (!clustersTree) {
1330 AliError(Form("Can't get the %s clusters tree",
1331 fgkDetectorName[iDet]));
1332 if (fStopOnError) return kFALSE;
1333 }
1334 }
1335 if (fRawReader && !reconstructor->HasDigitConversion()) {
1336 reconstructor->FillESD(fRawReader, clustersTree, esd);
1337 } else {
1338 TTree* digitsTree = NULL;
1339 if (fLoader[iDet]) {
1340 fLoader[iDet]->LoadDigits("read");
1341 digitsTree = fLoader[iDet]->TreeD();
1342 if (!digitsTree) {
1343 AliError(Form("Can't get the %s digits tree",
1344 fgkDetectorName[iDet]));
1345 if (fStopOnError) return kFALSE;
1346 }
1347 }
1348 reconstructor->FillESD(digitsTree, clustersTree, esd);
1349 if (fLoader[iDet]) fLoader[iDet]->UnloadDigits();
1350 }
1351 if (reconstructor->HasLocalReconstruction() && fLoader[iDet]) {
1352 fLoader[iDet]->UnloadRecPoints();
1353 }
1354
b8cd5251 1355 if (fRawReader) {
1356 reconstructor->FillESD(fRunLoader, fRawReader, esd);
1357 } else {
1358 reconstructor->FillESD(fRunLoader, esd);
24f7a148 1359 }
b8cd5251 1360 if (fCheckPointLevel > 2) WriteESD(esd, fgkDetectorName[iDet]);
596a855f 1361 }
1362 }
1363
1364 if ((detStr.CompareTo("ALL") != 0) && !detStr.IsNull()) {
815c2b38 1365 AliError(Form("the following detectors were not found: %s",
1366 detStr.Data()));
596a855f 1367 if (fStopOnError) return kFALSE;
1368 }
1369
1370 return kTRUE;
1371}
1372
b647652d 1373//_____________________________________________________________________________
af885e0f 1374Bool_t AliReconstruction::FillTriggerESD(AliESDEvent*& esd)
b647652d 1375{
1376 // Reads the trigger decision which is
1377 // stored in Trigger.root file and fills
1378 // the corresponding esd entries
1379
87932dab 1380 AliCodeTimerAuto("")
1381
b647652d 1382 AliInfo("Filling trigger information into the ESD");
1383
1384 if (fRawReader) {
1385 AliCTPRawStream input(fRawReader);
1386 if (!input.Next()) {
1387 AliError("No valid CTP (trigger) DDL raw data is found ! The trigger information is not stored in the ESD !");
1388 return kFALSE;
1389 }
1390 esd->SetTriggerMask(input.GetClassMask());
1391 esd->SetTriggerCluster(input.GetClusterMask());
1392 }
1393 else {
1394 AliRunLoader *runloader = AliRunLoader::GetRunLoader();
1395 if (runloader) {
1396 if (!runloader->LoadTrigger()) {
1397 AliCentralTrigger *aCTP = runloader->GetTrigger();
1398 esd->SetTriggerMask(aCTP->GetClassMask());
1399 esd->SetTriggerCluster(aCTP->GetClusterMask());
1400 }
1401 else {
1402 AliWarning("No trigger can be loaded! The trigger information is not stored in the ESD !");
1403 return kFALSE;
1404 }
1405 }
1406 else {
1407 AliError("No run loader is available! The trigger information is not stored in the ESD !");
1408 return kFALSE;
1409 }
1410 }
1411
1412 return kTRUE;
1413}
596a855f 1414
001397cd 1415
1416
1417
1418
1419//_____________________________________________________________________________
af885e0f 1420Bool_t AliReconstruction::FillRawEventHeaderESD(AliESDEvent*& esd)
001397cd 1421{
1422 //
1423 // Filling information from RawReader Header
1424 //
1425
1426 AliInfo("Filling information from RawReader Header");
31fd97b2 1427 esd->SetBunchCrossNumber(0);
1428 esd->SetOrbitNumber(0);
9bcc1e45 1429 esd->SetPeriodNumber(0);
001397cd 1430 esd->SetTimeStamp(0);
1431 esd->SetEventType(0);
1432 const AliRawEventHeaderBase * eventHeader = fRawReader->GetEventHeader();
1433 if (eventHeader){
9bcc1e45 1434
1435 const UInt_t *id = eventHeader->GetP("Id");
1436 esd->SetBunchCrossNumber((id)[1]&0x00000fff);
1437 esd->SetOrbitNumber((((id)[0]<<20)&0xf00000)|(((id)[1]>>12)&0xfffff));
1438 esd->SetPeriodNumber(((id)[0]>>4)&0x0fffffff);
1439
001397cd 1440 esd->SetTimeStamp((eventHeader->Get("Timestamp")));
31fd97b2 1441 esd->SetEventType((eventHeader->Get("Type")));
001397cd 1442 }
1443
1444 return kTRUE;
1445}
1446
1447
596a855f 1448//_____________________________________________________________________________
1449Bool_t AliReconstruction::IsSelected(TString detName, TString& detectors) const
1450{
1451// check whether detName is contained in detectors
1452// if yes, it is removed from detectors
1453
1454 // check if all detectors are selected
1455 if ((detectors.CompareTo("ALL") == 0) ||
1456 detectors.BeginsWith("ALL ") ||
1457 detectors.EndsWith(" ALL") ||
1458 detectors.Contains(" ALL ")) {
1459 detectors = "ALL";
1460 return kTRUE;
1461 }
1462
1463 // search for the given detector
1464 Bool_t result = kFALSE;
1465 if ((detectors.CompareTo(detName) == 0) ||
1466 detectors.BeginsWith(detName+" ") ||
1467 detectors.EndsWith(" "+detName) ||
1468 detectors.Contains(" "+detName+" ")) {
1469 detectors.ReplaceAll(detName, "");
1470 result = kTRUE;
1471 }
1472
1473 // clean up the detectors string
1474 while (detectors.Contains(" ")) detectors.ReplaceAll(" ", " ");
1475 while (detectors.BeginsWith(" ")) detectors.Remove(0, 1);
1476 while (detectors.EndsWith(" ")) detectors.Remove(detectors.Length()-1, 1);
1477
1478 return result;
1479}
e583c30d 1480
f08fc9f5 1481//_____________________________________________________________________________
1482Bool_t AliReconstruction::InitRunLoader()
1483{
1484// get or create the run loader
1485
1486 if (gAlice) delete gAlice;
1487 gAlice = NULL;
1488
b26c3770 1489 if (!gSystem->AccessPathName(fGAliceFileName.Data())) { // galice.root exists
1490 // load all base libraries to get the loader classes
1491 TString libs = gSystem->GetLibraries();
1492 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
1493 TString detName = fgkDetectorName[iDet];
1494 if (detName == "HLT") continue;
1495 if (libs.Contains("lib" + detName + "base.so")) continue;
1496 gSystem->Load("lib" + detName + "base.so");
1497 }
f08fc9f5 1498 fRunLoader = AliRunLoader::Open(fGAliceFileName.Data());
1499 if (!fRunLoader) {
1500 AliError(Form("no run loader found in file %s", fGAliceFileName.Data()));
1501 CleanUp();
1502 return kFALSE;
1503 }
b26c3770 1504 fRunLoader->CdGAFile();
1505 if (gFile->GetKey(AliRunLoader::GetGAliceName())) {
1506 if (fRunLoader->LoadgAlice() == 0) {
1507 gAlice = fRunLoader->GetAliRun();
c84a5e9e 1508 AliTracker::SetFieldMap(gAlice->Field(),fUniformField);
b26c3770 1509 }
f08fc9f5 1510 }
1511 if (!gAlice && !fRawReader) {
1512 AliError(Form("no gAlice object found in file %s",
1513 fGAliceFileName.Data()));
1514 CleanUp();
1515 return kFALSE;
1516 }
1517
6cae184e 1518 //PH This is a temporary fix to give access to the kinematics
1519 //PH that is needed for the labels of ITS clusters
1520 fRunLoader->LoadKinematics();
1521
f08fc9f5 1522 } else { // galice.root does not exist
1523 if (!fRawReader) {
1524 AliError(Form("the file %s does not exist", fGAliceFileName.Data()));
1525 CleanUp();
1526 return kFALSE;
1527 }
1528 fRunLoader = AliRunLoader::Open(fGAliceFileName.Data(),
1529 AliConfig::GetDefaultEventFolderName(),
1530 "recreate");
1531 if (!fRunLoader) {
1532 AliError(Form("could not create run loader in file %s",
1533 fGAliceFileName.Data()));
1534 CleanUp();
1535 return kFALSE;
1536 }
1537 fRunLoader->MakeTree("E");
1538 Int_t iEvent = 0;
1539 while (fRawReader->NextEvent()) {
1540 fRunLoader->SetEventNumber(iEvent);
1541 fRunLoader->GetHeader()->Reset(fRawReader->GetRunNumber(),
1542 iEvent, iEvent);
1543 fRunLoader->MakeTree("H");
1544 fRunLoader->TreeE()->Fill();
1545 iEvent++;
1546 }
1547 fRawReader->RewindEvents();
973388c2 1548 if (fNumberOfEventsPerFile > 0)
1549 fRunLoader->SetNumberOfEventsPerFile(fNumberOfEventsPerFile);
1550 else
1551 fRunLoader->SetNumberOfEventsPerFile(iEvent);
f08fc9f5 1552 fRunLoader->WriteHeader("OVERWRITE");
1553 fRunLoader->CdGAFile();
1554 fRunLoader->Write(0, TObject::kOverwrite);
1555// AliTracker::SetFieldMap(???);
1556 }
1557
1558 return kTRUE;
1559}
1560
c757bafd 1561//_____________________________________________________________________________
b8cd5251 1562AliReconstructor* AliReconstruction::GetReconstructor(Int_t iDet)
c757bafd 1563{
f08fc9f5 1564// get the reconstructor object and the loader for a detector
c757bafd 1565
b8cd5251 1566 if (fReconstructor[iDet]) return fReconstructor[iDet];
1567
1568 // load the reconstructor object
1569 TPluginManager* pluginManager = gROOT->GetPluginManager();
1570 TString detName = fgkDetectorName[iDet];
1571 TString recName = "Ali" + detName + "Reconstructor";
f08fc9f5 1572 if (gAlice && !gAlice->GetDetector(detName) && (detName != "HLT")) return NULL;
b8cd5251 1573
1574 if (detName == "HLT") {
1575 if (!gROOT->GetClass("AliLevel3")) {
4aa41877 1576 gSystem->Load("libAliHLTSrc.so");
1577 gSystem->Load("libAliHLTMisc.so");
1578 gSystem->Load("libAliHLTHough.so");
1579 gSystem->Load("libAliHLTComp.so");
b8cd5251 1580 }
1581 }
1582
1583 AliReconstructor* reconstructor = NULL;
1584 // first check if a plugin is defined for the reconstructor
1585 TPluginHandler* pluginHandler =
1586 pluginManager->FindHandler("AliReconstructor", detName);
f08fc9f5 1587 // if not, add a plugin for it
1588 if (!pluginHandler) {
b8cd5251 1589 AliDebug(1, Form("defining plugin for %s", recName.Data()));
b26c3770 1590 TString libs = gSystem->GetLibraries();
1591 if (libs.Contains("lib" + detName + "base.so") ||
1592 (gSystem->Load("lib" + detName + "base.so") >= 0)) {
b8cd5251 1593 pluginManager->AddHandler("AliReconstructor", detName,
1594 recName, detName + "rec", recName + "()");
1595 } else {
1596 pluginManager->AddHandler("AliReconstructor", detName,
1597 recName, detName, recName + "()");
c757bafd 1598 }
b8cd5251 1599 pluginHandler = pluginManager->FindHandler("AliReconstructor", detName);
1600 }
1601 if (pluginHandler && (pluginHandler->LoadPlugin() == 0)) {
1602 reconstructor = (AliReconstructor*) pluginHandler->ExecPlugin(0);
c757bafd 1603 }
b8cd5251 1604 if (reconstructor) {
1605 TObject* obj = fOptions.FindObject(detName.Data());
1606 if (obj) reconstructor->SetOption(obj->GetTitle());
b26c3770 1607 reconstructor->Init(fRunLoader);
b8cd5251 1608 fReconstructor[iDet] = reconstructor;
1609 }
1610
f08fc9f5 1611 // get or create the loader
1612 if (detName != "HLT") {
1613 fLoader[iDet] = fRunLoader->GetLoader(detName + "Loader");
1614 if (!fLoader[iDet]) {
1615 AliConfig::Instance()
1616 ->CreateDetectorFolders(fRunLoader->GetEventFolder(),
1617 detName, detName);
1618 // first check if a plugin is defined for the loader
bb0901a4 1619 pluginHandler =
f08fc9f5 1620 pluginManager->FindHandler("AliLoader", detName);
1621 // if not, add a plugin for it
1622 if (!pluginHandler) {
1623 TString loaderName = "Ali" + detName + "Loader";
1624 AliDebug(1, Form("defining plugin for %s", loaderName.Data()));
1625 pluginManager->AddHandler("AliLoader", detName,
1626 loaderName, detName + "base",
1627 loaderName + "(const char*, TFolder*)");
1628 pluginHandler = pluginManager->FindHandler("AliLoader", detName);
1629 }
1630 if (pluginHandler && (pluginHandler->LoadPlugin() == 0)) {
1631 fLoader[iDet] =
1632 (AliLoader*) pluginHandler->ExecPlugin(2, detName.Data(),
1633 fRunLoader->GetEventFolder());
1634 }
1635 if (!fLoader[iDet]) { // use default loader
1636 fLoader[iDet] = new AliLoader(detName, fRunLoader->GetEventFolder());
1637 }
1638 if (!fLoader[iDet]) {
1639 AliWarning(Form("couldn't get loader for %s", detName.Data()));
6667b602 1640 if (fStopOnError) return NULL;
f08fc9f5 1641 } else {
1642 fRunLoader->AddLoader(fLoader[iDet]);
1643 fRunLoader->CdGAFile();
1644 if (gFile && !gFile->IsWritable()) gFile->ReOpen("UPDATE");
1645 fRunLoader->Write(0, TObject::kOverwrite);
1646 }
1647 }
1648 }
1649
b8cd5251 1650 return reconstructor;
c757bafd 1651}
1652
2257f27e 1653//_____________________________________________________________________________
1654Bool_t AliReconstruction::CreateVertexer()
1655{
1656// create the vertexer
1657
b8cd5251 1658 fVertexer = NULL;
1659 AliReconstructor* itsReconstructor = GetReconstructor(0);
59697224 1660 if (itsReconstructor) {
b8cd5251 1661 fVertexer = itsReconstructor->CreateVertexer(fRunLoader);
2257f27e 1662 }
b8cd5251 1663 if (!fVertexer) {
815c2b38 1664 AliWarning("couldn't create a vertexer for ITS");
2257f27e 1665 if (fStopOnError) return kFALSE;
1666 }
1667
1668 return kTRUE;
1669}
1670
24f7a148 1671//_____________________________________________________________________________
b8cd5251 1672Bool_t AliReconstruction::CreateTrackers(const TString& detectors)
24f7a148 1673{
f08fc9f5 1674// create the trackers
24f7a148 1675
b8cd5251 1676 TString detStr = detectors;
1677 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
1678 if (!IsSelected(fgkDetectorName[iDet], detStr)) continue;
1679 AliReconstructor* reconstructor = GetReconstructor(iDet);
1680 if (!reconstructor) continue;
1681 TString detName = fgkDetectorName[iDet];
1f46a9ae 1682 if (detName == "HLT") {
1683 fRunHLTTracking = kTRUE;
1684 continue;
1685 }
e66fbafb 1686 if (detName == "MUON") {
1687 fRunMuonTracking = kTRUE;
1688 continue;
1689 }
1690
f08fc9f5 1691
1692 fTracker[iDet] = reconstructor->CreateTracker(fRunLoader);
1693 if (!fTracker[iDet] && (iDet < 7)) {
1694 AliWarning(Form("couldn't create a tracker for %s", detName.Data()));
8250d5f5 1695 if (fStopOnError) return kFALSE;
1696 }
1697 }
1698
24f7a148 1699 return kTRUE;
1700}
1701
e583c30d 1702//_____________________________________________________________________________
b26c3770 1703void AliReconstruction::CleanUp(TFile* file, TFile* fileOld)
e583c30d 1704{
1705// delete trackers and the run loader and close and delete the file
1706
b8cd5251 1707 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
1708 delete fReconstructor[iDet];
1709 fReconstructor[iDet] = NULL;
1710 fLoader[iDet] = NULL;
1711 delete fTracker[iDet];
1712 fTracker[iDet] = NULL;
d101408a 1713 delete fQualAssDataMaker[iDet];
1714 fQualAssDataMaker[iDet] = NULL;
b8cd5251 1715 }
1716 delete fVertexer;
1717 fVertexer = NULL;
9178838a 1718 delete fDiamondProfile;
1719 fDiamondProfile = NULL;
e583c30d 1720
1721 delete fRunLoader;
1722 fRunLoader = NULL;
b649205a 1723 delete fRawReader;
1724 fRawReader = NULL;
e583c30d 1725
1726 if (file) {
1727 file->Close();
1728 delete file;
1729 }
b26c3770 1730
1731 if (fileOld) {
1732 fileOld->Close();
1733 delete fileOld;
1734 gSystem->Unlink("AliESDs.old.root");
1735 }
e583c30d 1736}
24f7a148 1737
24f7a148 1738//_____________________________________________________________________________
af885e0f 1739
1740Bool_t AliReconstruction::ReadESD(AliESDEvent*& esd, const char* recStep) const
24f7a148 1741{
1742// read the ESD event from a file
1743
1744 if (!esd) return kFALSE;
1745 char fileName[256];
1746 sprintf(fileName, "ESD_%d.%d_%s.root",
31fd97b2 1747 esd->GetRunNumber(), esd->GetEventNumberInFile(), recStep);
24f7a148 1748 if (gSystem->AccessPathName(fileName)) return kFALSE;
1749
f3a97c86 1750 AliInfo(Form("reading ESD from file %s", fileName));
815c2b38 1751 AliDebug(1, Form("reading ESD from file %s", fileName));
24f7a148 1752 TFile* file = TFile::Open(fileName);
1753 if (!file || !file->IsOpen()) {
815c2b38 1754 AliError(Form("opening %s failed", fileName));
24f7a148 1755 delete file;
1756 return kFALSE;
1757 }
1758
1759 gROOT->cd();
1760 delete esd;
af885e0f 1761 esd = (AliESDEvent*) file->Get("ESD");
24f7a148 1762 file->Close();
1763 delete file;
1764 return kTRUE;
af885e0f 1765
24f7a148 1766}
1767
af885e0f 1768
1769
24f7a148 1770//_____________________________________________________________________________
af885e0f 1771void AliReconstruction::WriteESD(AliESDEvent* esd, const char* recStep) const
24f7a148 1772{
1773// write the ESD event to a file
1774
1775 if (!esd) return;
1776 char fileName[256];
1777 sprintf(fileName, "ESD_%d.%d_%s.root",
31fd97b2 1778 esd->GetRunNumber(), esd->GetEventNumberInFile(), recStep);
24f7a148 1779
815c2b38 1780 AliDebug(1, Form("writing ESD to file %s", fileName));
24f7a148 1781 TFile* file = TFile::Open(fileName, "recreate");
1782 if (!file || !file->IsOpen()) {
815c2b38 1783 AliError(Form("opening %s failed", fileName));
24f7a148 1784 } else {
1785 esd->Write("ESD");
1786 file->Close();
1787 }
1788 delete file;
1789}
f3a97c86 1790
1791
1792
1793
f3a97c86 1794
a7807689 1795//_____________________________________________________________________________
f29f1726 1796void AliReconstruction::ESDFile2AODFile(TFile* esdFile, TFile* aodFile)
a7807689 1797{
f29f1726 1798 // write all files from the given esd file to an aod file
85ba66b8 1799
f29f1726 1800 // create an AliAOD object
1801 AliAODEvent *aod = new AliAODEvent();
1802 aod->CreateStdContent();
1803
1804 // go to the file
1805 aodFile->cd();
1806
1807 // create the tree
b97637d4 1808 TTree *aodTree = new TTree("aodTree", "AliAOD tree");
f29f1726 1809 aodTree->Branch(aod->GetList());
1810
1811 // connect to ESD
1812 TTree *t = (TTree*) esdFile->Get("esdTree");
af885e0f 1813 AliESDEvent *esd = new AliESDEvent();
53ec9628 1814 esd->ReadFromTree(t);
f29f1726 1815
53ec9628 1816 Int_t nEvents = t->GetEntries();
f29f1726 1817
1818 // set arrays and pointers
1819 Float_t posF[3];
1820 Double_t pos[3];
1821 Double_t p[3];
1822 Double_t covVtx[6];
1823 Double_t covTr[21];
1824 Double_t pid[10];
1825
1826 // loop over events and fill them
1827 for (Int_t iEvent = 0; iEvent < nEvents; ++iEvent) {
53ec9628 1828 t->GetEntry(iEvent);
f29f1726 1829
1830 // Multiplicity information needed by the header (to be revised!)
1831 Int_t nTracks = esd->GetNumberOfTracks();
1832 Int_t nPosTracks = 0;
1833 for (Int_t iTrack=0; iTrack<nTracks; ++iTrack)
b97637d4 1834 if (esd->GetTrack(iTrack)->Charge()> 0) nPosTracks++;
f29f1726 1835
85ba66b8 1836 // Access the header
1837 AliAODHeader *header = aod->GetHeader();
1838
1839 // fill the header
ade23daf 1840 header->SetRunNumber (esd->GetRunNumber() );
1841 header->SetBunchCrossNumber(esd->GetBunchCrossNumber());
1842 header->SetOrbitNumber (esd->GetOrbitNumber() );
1843 header->SetPeriodNumber (esd->GetPeriodNumber() );
1844 header->SetTriggerMask (esd->GetTriggerMask() );
1845 header->SetTriggerCluster (esd->GetTriggerCluster() );
1846 header->SetEventType (esd->GetEventType() );
1847 header->SetMagneticField (esd->GetMagneticField() );
1848 header->SetZDCN1Energy (esd->GetZDCN1Energy() );
1849 header->SetZDCP1Energy (esd->GetZDCP1Energy() );
1850 header->SetZDCN2Energy (esd->GetZDCN2Energy() );
1851 header->SetZDCP2Energy (esd->GetZDCP2Energy() );
1852 header->SetZDCEMEnergy (esd->GetZDCEMEnergy() );
a1d4139d 1853 header->SetRefMultiplicity (nTracks);
1854 header->SetRefMultiplicityPos(nPosTracks);
1855 header->SetRefMultiplicityNeg(nTracks - nPosTracks);
1856 header->SetMuonMagFieldScale(-999.); // FIXME
1857 header->SetCentrality(-999.); // FIXME
f29f1726 1858
1859 Int_t nV0s = esd->GetNumberOfV0s();
1860 Int_t nCascades = esd->GetNumberOfCascades();
1861 Int_t nKinks = esd->GetNumberOfKinks();
1862 Int_t nVertices = nV0s + nCascades + nKinks;
1863
1864 aod->ResetStd(nTracks, nVertices);
1865 AliAODTrack *aodTrack;
1866
f29f1726 1867 // Array to take into account the tracks already added to the AOD
1868 Bool_t * usedTrack = NULL;
1869 if (nTracks>0) {
1870 usedTrack = new Bool_t[nTracks];
1871 for (Int_t iTrack=0; iTrack<nTracks; ++iTrack) usedTrack[iTrack]=kFALSE;
1872 }
1873 // Array to take into account the V0s already added to the AOD
1874 Bool_t * usedV0 = NULL;
1875 if (nV0s>0) {
1876 usedV0 = new Bool_t[nV0s];
1877 for (Int_t iV0=0; iV0<nV0s; ++iV0) usedV0[iV0]=kFALSE;
1878 }
1879 // Array to take into account the kinks already added to the AOD
1880 Bool_t * usedKink = NULL;
1881 if (nKinks>0) {
1882 usedKink = new Bool_t[nKinks];
1883 for (Int_t iKink=0; iKink<nKinks; ++iKink) usedKink[iKink]=kFALSE;
1884 }
1885
1886 // Access to the AOD container of vertices
1887 TClonesArray &vertices = *(aod->GetVertices());
1888 Int_t jVertices=0;
1889
1890 // Access to the AOD container of tracks
1891 TClonesArray &tracks = *(aod->GetTracks());
1892 Int_t jTracks=0;
1893
1894 // Add primary vertex. The primary tracks will be defined
1895 // after the loops on the composite objects (V0, cascades, kinks)
1896 const AliESDVertex *vtx = esd->GetPrimaryVertex();
1897
1898 vtx->GetXYZ(pos); // position
1899 vtx->GetCovMatrix(covVtx); //covariance matrix
1900
1901 AliAODVertex * primary = new(vertices[jVertices++])
02153d58 1902 AliAODVertex(pos, covVtx, vtx->GetChi2toNDF(), NULL, -1, AliAODVertex::kPrimary);
f29f1726 1903
1904 // Create vertices starting from the most complex objects
1905
1906 // Cascades
1907 for (Int_t nCascade = 0; nCascade < nCascades; ++nCascade) {
1908 AliESDcascade *cascade = esd->GetCascade(nCascade);
1909
1910 cascade->GetXYZ(pos[0], pos[1], pos[2]);
1911 cascade->GetPosCovXi(covVtx);
1912
1913 // Add the cascade vertex
1914 AliAODVertex * vcascade = new(vertices[jVertices++]) AliAODVertex(pos,
1915 covVtx,
1916 cascade->GetChi2Xi(), // = chi2/NDF since NDF = 2*2-3
1917 primary,
02153d58 1918 nCascade,
f29f1726 1919 AliAODVertex::kCascade);
1920
1921 primary->AddDaughter(vcascade);
1922
1923 // Add the V0 from the cascade. The ESD class have to be optimized...
85ba66b8 1924 // Now we have to search for the corresponding V0 in the list of V0s
f29f1726 1925 // using the indeces of the positive and negative tracks
1926
1927 Int_t posFromV0 = cascade->GetPindex();
1928 Int_t negFromV0 = cascade->GetNindex();
1929
1930
1931 AliESDv0 * v0 = 0x0;
1932 Int_t indV0 = -1;
1933
1934 for (Int_t iV0=0; iV0<nV0s; ++iV0) {
1935
1936 v0 = esd->GetV0(iV0);
1937 Int_t posV0 = v0->GetPindex();
1938 Int_t negV0 = v0->GetNindex();
1939
1940 if (posV0==posFromV0 && negV0==negFromV0) {
1941 indV0 = iV0;
1942 break;
1943 }
1944 }
1945
1946 AliAODVertex * vV0FromCascade = 0x0;
1947
1948 if (indV0>-1 && !usedV0[indV0] ) {
1949
1950 // the V0 exists in the array of V0s and is not used
1951
1952 usedV0[indV0] = kTRUE;
1953
1954 v0->GetXYZ(pos[0], pos[1], pos[2]);
1955 v0->GetPosCov(covVtx);
1956
1957 vV0FromCascade = new(vertices[jVertices++]) AliAODVertex(pos,
1958 covVtx,
1959 v0->GetChi2V0(), // = chi2/NDF since NDF = 2*2-3
1960 vcascade,
02153d58 1961 indV0,
f29f1726 1962 AliAODVertex::kV0);
1963 } else {
1964
1965 // the V0 doesn't exist in the array of V0s or was used
1966 cerr << "Error: event " << iEvent << " cascade " << nCascade
1967 << " The V0 " << indV0
1968 << " doesn't exist in the array of V0s or was used!" << endl;
1969
1970 cascade->GetXYZ(pos[0], pos[1], pos[2]);
1971 cascade->GetPosCov(covVtx);
1972
1973 vV0FromCascade = new(vertices[jVertices++]) AliAODVertex(pos,
1974 covVtx,
1975 v0->GetChi2V0(), // = chi2/NDF since NDF = 2*2-3
1976 vcascade,
02153d58 1977 indV0,
f29f1726 1978 AliAODVertex::kV0);
1979 vcascade->AddDaughter(vV0FromCascade);
1980 }
1981
1982 // Add the positive tracks from the V0
1983
1984 if (! usedTrack[posFromV0]) {
1985
1986 usedTrack[posFromV0] = kTRUE;
1987
1988 AliESDtrack *esdTrack = esd->GetTrack(posFromV0);
1989 esdTrack->GetPxPyPz(p);
1990 esdTrack->GetXYZ(pos);
1991 esdTrack->GetCovarianceXYZPxPyPz(covTr);
1992 esdTrack->GetESDpid(pid);
1993
1994 vV0FromCascade->AddDaughter(aodTrack =
1995 new(tracks[jTracks++]) AliAODTrack(esdTrack->GetID(),
1996 esdTrack->GetLabel(),
1997 p,
1998 kTRUE,
1999 pos,
2000 kFALSE,
2001 covTr,
b97637d4 2002 (Short_t)esdTrack->Charge(),
f29f1726 2003 esdTrack->GetITSClusterMap(),
2004 pid,
2005 vV0FromCascade,
2006 kTRUE, // check if this is right
2007 kFALSE, // check if this is right
2008 AliAODTrack::kSecondary)
2009 );
2010 aodTrack->ConvertAliPIDtoAODPID();
2011 }
2012 else {
2013 cerr << "Error: event " << iEvent << " cascade " << nCascade
2014 << " track " << posFromV0 << " has already been used!" << endl;
2015 }
2016
2017 // Add the negative tracks from the V0
2018
2019 if (!usedTrack[negFromV0]) {
2020
2021 usedTrack[negFromV0] = kTRUE;
2022
2023 AliESDtrack *esdTrack = esd->GetTrack(negFromV0);
2024 esdTrack->GetPxPyPz(p);
2025 esdTrack->GetXYZ(pos);
2026 esdTrack->GetCovarianceXYZPxPyPz(covTr);
2027 esdTrack->GetESDpid(pid);
2028
2029 vV0FromCascade->AddDaughter(aodTrack =
2030 new(tracks[jTracks++]) AliAODTrack(esdTrack->GetID(),
2031 esdTrack->GetLabel(),
2032 p,
2033 kTRUE,
2034 pos,
2035 kFALSE,
2036 covTr,
b97637d4 2037 (Short_t)esdTrack->Charge(),
f29f1726 2038 esdTrack->GetITSClusterMap(),
2039 pid,
2040 vV0FromCascade,
2041 kTRUE, // check if this is right
2042 kFALSE, // check if this is right
2043 AliAODTrack::kSecondary)
2044 );
2045 aodTrack->ConvertAliPIDtoAODPID();
2046 }
2047 else {
2048 cerr << "Error: event " << iEvent << " cascade " << nCascade
2049 << " track " << negFromV0 << " has already been used!" << endl;
2050 }
2051
2052 // Add the bachelor track from the cascade
2053
2054 Int_t bachelor = cascade->GetBindex();
2055
2056 if(!usedTrack[bachelor]) {
2057
2058 usedTrack[bachelor] = kTRUE;
2059
2060 AliESDtrack *esdTrack = esd->GetTrack(bachelor);
2061 esdTrack->GetPxPyPz(p);
2062 esdTrack->GetXYZ(pos);
2063 esdTrack->GetCovarianceXYZPxPyPz(covTr);
2064 esdTrack->GetESDpid(pid);
2065
2066 vcascade->AddDaughter(aodTrack =
2067 new(tracks[jTracks++]) AliAODTrack(esdTrack->GetID(),
2068 esdTrack->GetLabel(),
2069 p,
2070 kTRUE,
2071 pos,
2072 kFALSE,
2073 covTr,
b97637d4 2074 (Short_t)esdTrack->Charge(),
f29f1726 2075 esdTrack->GetITSClusterMap(),
2076 pid,
2077 vcascade,
2078 kTRUE, // check if this is right
2079 kFALSE, // check if this is right
2080 AliAODTrack::kSecondary)
2081 );
2082 aodTrack->ConvertAliPIDtoAODPID();
2083 }
2084 else {
2085 cerr << "Error: event " << iEvent << " cascade " << nCascade
2086 << " track " << bachelor << " has already been used!" << endl;
2087 }
2088
2089 // Add the primary track of the cascade (if any)
2090
2091 } // end of the loop on cascades
2092
2093 // V0s
2094
2095 for (Int_t nV0 = 0; nV0 < nV0s; ++nV0) {
2096
2097 if (usedV0[nV0]) continue; // skip if aready added to the AOD
2098
2099 AliESDv0 *v0 = esd->GetV0(nV0);
2100
2101 v0->GetXYZ(pos[0], pos[1], pos[2]);
2102 v0->GetPosCov(covVtx);
2103
2104 AliAODVertex * vV0 =
2105 new(vertices[jVertices++]) AliAODVertex(pos,
2106 covVtx,
2107 v0->GetChi2V0(), // = chi2/NDF since NDF = 2*2-3
2108 primary,
02153d58 2109 nV0,
f29f1726 2110 AliAODVertex::kV0);
2111 primary->AddDaughter(vV0);
2112
2113 Int_t posFromV0 = v0->GetPindex();
2114 Int_t negFromV0 = v0->GetNindex();
2115
2116 // Add the positive tracks from the V0
2117
2118 if (!usedTrack[posFromV0]) {
2119
2120 usedTrack[posFromV0] = kTRUE;
2121
2122 AliESDtrack *esdTrack = esd->GetTrack(posFromV0);
2123 esdTrack->GetPxPyPz(p);
2124 esdTrack->GetXYZ(pos);
2125 esdTrack->GetCovarianceXYZPxPyPz(covTr);
2126 esdTrack->GetESDpid(pid);
2127
2128 vV0->AddDaughter(aodTrack =
2129 new(tracks[jTracks++]) AliAODTrack(esdTrack->GetID(),
2130 esdTrack->GetLabel(),
2131 p,
2132 kTRUE,
2133 pos,
2134 kFALSE,
2135 covTr,
b97637d4 2136 (Short_t)esdTrack->Charge(),
f29f1726 2137 esdTrack->GetITSClusterMap(),
2138 pid,
2139 vV0,
2140 kTRUE, // check if this is right
2141 kFALSE, // check if this is right
2142 AliAODTrack::kSecondary)
2143 );
2144 aodTrack->ConvertAliPIDtoAODPID();
2145 }
2146 else {
2147 cerr << "Error: event " << iEvent << " V0 " << nV0
2148 << " track " << posFromV0 << " has already been used!" << endl;
2149 }
a7807689 2150
f29f1726 2151 // Add the negative tracks from the V0
2152
2153 if (!usedTrack[negFromV0]) {
2154
2155 usedTrack[negFromV0] = kTRUE;
2156
2157 AliESDtrack *esdTrack = esd->GetTrack(negFromV0);
2158 esdTrack->GetPxPyPz(p);
2159 esdTrack->GetXYZ(pos);
2160 esdTrack->GetCovarianceXYZPxPyPz(covTr);
2161 esdTrack->GetESDpid(pid);
2162
2163 vV0->AddDaughter(aodTrack =
2164 new(tracks[jTracks++]) AliAODTrack(esdTrack->GetID(),
2165 esdTrack->GetLabel(),
2166 p,
2167 kTRUE,
2168 pos,
2169 kFALSE,
2170 covTr,
b97637d4 2171 (Short_t)esdTrack->Charge(),
f29f1726 2172 esdTrack->GetITSClusterMap(),
2173 pid,
2174 vV0,
2175 kTRUE, // check if this is right
2176 kFALSE, // check if this is right
2177 AliAODTrack::kSecondary)
2178 );
2179 aodTrack->ConvertAliPIDtoAODPID();
2180 }
2181 else {
2182 cerr << "Error: event " << iEvent << " V0 " << nV0
2183 << " track " << negFromV0 << " has already been used!" << endl;
2184 }
2185
2186 } // end of the loop on V0s
2187
2188 // Kinks: it is a big mess the access to the information in the kinks
2189 // The loop is on the tracks in order to find the mother and daugther of each kink
2190
2191
2192 for (Int_t iTrack=0; iTrack<nTracks; ++iTrack) {
2193
2194
2195 AliESDtrack * esdTrack = esd->GetTrack(iTrack);
2196
2197 Int_t ikink = esdTrack->GetKinkIndex(0);
2198
2199 if (ikink) {
2200 // Negative kink index: mother, positive: daughter
2201
2202 // Search for the second track of the kink
2203
2204 for (Int_t jTrack = iTrack+1; jTrack<nTracks; ++jTrack) {
2205
2206 AliESDtrack * esdTrack1 = esd->GetTrack(jTrack);
2207
2208 Int_t jkink = esdTrack1->GetKinkIndex(0);
2209
2210 if ( TMath::Abs(ikink)==TMath::Abs(jkink) ) {
2211
2212 // The two tracks are from the same kink
2213
2214 if (usedKink[TMath::Abs(ikink)-1]) continue; // skip used kinks
2215
2216 Int_t imother = -1;
2217 Int_t idaughter = -1;
2218
2219 if (ikink<0 && jkink>0) {
2220
2221 imother = iTrack;
2222 idaughter = jTrack;
2223 }
2224 else if (ikink>0 && jkink<0) {
2225
2226 imother = jTrack;
2227 idaughter = iTrack;
2228 }
2229 else {
2230 cerr << "Error: Wrong combination of kink indexes: "
2231 << ikink << " " << jkink << endl;
2232 continue;
2233 }
2234
2235 // Add the mother track
2236
2237 AliAODTrack * mother = NULL;
2238
2239 if (!usedTrack[imother]) {
2240
2241 usedTrack[imother] = kTRUE;
2242
2243 AliESDtrack *esdTrack = esd->GetTrack(imother);
2244 esdTrack->GetPxPyPz(p);
2245 esdTrack->GetXYZ(pos);
2246 esdTrack->GetCovarianceXYZPxPyPz(covTr);
2247 esdTrack->GetESDpid(pid);
2248
2249 mother =
2250 new(tracks[jTracks++]) AliAODTrack(esdTrack->GetID(),
2251 esdTrack->GetLabel(),
2252 p,
2253 kTRUE,
2254 pos,
2255 kFALSE,
2256 covTr,
b97637d4 2257 (Short_t)esdTrack->Charge(),
f29f1726 2258 esdTrack->GetITSClusterMap(),
2259 pid,
2260 primary,
2261 kTRUE, // check if this is right
2262 kTRUE, // check if this is right
2263 AliAODTrack::kPrimary);
2264 primary->AddDaughter(mother);
2265 mother->ConvertAliPIDtoAODPID();
2266 }
2267 else {
2268 cerr << "Error: event " << iEvent << " kink " << TMath::Abs(ikink)-1
2269 << " track " << imother << " has already been used!" << endl;
2270 }
2271
2272 // Add the kink vertex
2273 AliESDkink * kink = esd->GetKink(TMath::Abs(ikink)-1);
2274
2275 AliAODVertex * vkink =
2276 new(vertices[jVertices++]) AliAODVertex(kink->GetPosition(),
2277 NULL,
2278 0.,
2279 mother,
02153d58 2280 esdTrack->GetID(), // This is the track ID of the mother's track!
f29f1726 2281 AliAODVertex::kKink);
2282 // Add the daughter track
2283
2284 AliAODTrack * daughter = NULL;
2285
2286 if (!usedTrack[idaughter]) {
2287
2288 usedTrack[idaughter] = kTRUE;
2289
2290 AliESDtrack *esdTrack = esd->GetTrack(idaughter);
2291 esdTrack->GetPxPyPz(p);
2292 esdTrack->GetXYZ(pos);
2293 esdTrack->GetCovarianceXYZPxPyPz(covTr);
2294 esdTrack->GetESDpid(pid);
2295
2296 daughter =
2297 new(tracks[jTracks++]) AliAODTrack(esdTrack->GetID(),
2298 esdTrack->GetLabel(),
2299 p,
2300 kTRUE,
2301 pos,
2302 kFALSE,
2303 covTr,
b97637d4 2304 (Short_t)esdTrack->Charge(),
f29f1726 2305 esdTrack->GetITSClusterMap(),
2306 pid,
2307 vkink,
2308 kTRUE, // check if this is right
2309 kTRUE, // check if this is right
2310 AliAODTrack::kPrimary);
2311 vkink->AddDaughter(daughter);
2312 daughter->ConvertAliPIDtoAODPID();
2313 }
2314 else {
2315 cerr << "Error: event " << iEvent << " kink " << TMath::Abs(ikink)-1
2316 << " track " << idaughter << " has already been used!" << endl;
2317 }
2318
2319
2320 }
2321 }
2322
2323 }
2324
2325 }
2326
2327
2328 // Tracks (primary and orphan)
2329
2330 for (Int_t nTrack = 0; nTrack < nTracks; ++nTrack) {
2331
2332
2333 if (usedTrack[nTrack]) continue;
2334
2335 AliESDtrack *esdTrack = esd->GetTrack(nTrack);
2336 esdTrack->GetPxPyPz(p);
2337 esdTrack->GetXYZ(pos);
2338 esdTrack->GetCovarianceXYZPxPyPz(covTr);
2339 esdTrack->GetESDpid(pid);
2340
2341 Float_t impactXY, impactZ;
2342
2343 esdTrack->GetImpactParameters(impactXY,impactZ);
2344
2345 if (impactXY<3) {
2346 // track inside the beam pipe
2347
2348 primary->AddDaughter(aodTrack =
2349 new(tracks[jTracks++]) AliAODTrack(esdTrack->GetID(),
2350 esdTrack->GetLabel(),
2351 p,
2352 kTRUE,
2353 pos,
2354 kFALSE,
2355 covTr,
b97637d4 2356 (Short_t)esdTrack->Charge(),
f29f1726 2357 esdTrack->GetITSClusterMap(),
2358 pid,
2359 primary,
2360 kTRUE, // check if this is right
2361 kTRUE, // check if this is right
2362 AliAODTrack::kPrimary)
2363 );
2364 aodTrack->ConvertAliPIDtoAODPID();
2365 }
2366 else {
2367 // outside the beam pipe: orphan track
2368 aodTrack =
2369 new(tracks[jTracks++]) AliAODTrack(esdTrack->GetID(),
2370 esdTrack->GetLabel(),
2371 p,
2372 kTRUE,
2373 pos,
2374 kFALSE,
2375 covTr,
b97637d4 2376 (Short_t)esdTrack->Charge(),
f29f1726 2377 esdTrack->GetITSClusterMap(),
2378 pid,
2379 NULL,
2380 kFALSE, // check if this is right
2381 kFALSE, // check if this is right
2382 AliAODTrack::kOrphan);
2383 aodTrack->ConvertAliPIDtoAODPID();
2384 }
2385 } // end of loop on tracks
2386
2387 // muon tracks
2388 Int_t nMuTracks = esd->GetNumberOfMuonTracks();
2389 for (Int_t nMuTrack = 0; nMuTrack < nMuTracks; ++nMuTrack) {
2390
2391 AliESDMuonTrack *esdMuTrack = esd->GetMuonTrack(nMuTrack);
2392 p[0] = esdMuTrack->Px();
2393 p[1] = esdMuTrack->Py();
2394 p[2] = esdMuTrack->Pz();
2395 pos[0] = primary->GetX();
2396 pos[1] = primary->GetY();
2397 pos[2] = primary->GetZ();
2398
2399 // has to be changed once the muon pid is provided by the ESD
2400 for (Int_t i = 0; i < 10; pid[i++] = 0.); pid[AliAODTrack::kMuon]=1.;
2401
85ba66b8 2402 primary->AddDaughter(aodTrack =
f29f1726 2403 new(tracks[jTracks++]) AliAODTrack(0, // no ID provided
2404 0, // no label provided
2405 p,
2406 kTRUE,
2407 pos,
2408 kFALSE,
2409 NULL, // no covariance matrix provided
b97637d4 2410 esdMuTrack->Charge(),
e704c7d4 2411 0, // ITSClusterMap is set below
f29f1726 2412 pid,
2413 primary,
85ba66b8 2414 kFALSE, // muon tracks are not used to fit the primary vtx
2415 kFALSE, // not used for vertex fit
f29f1726 2416 AliAODTrack::kPrimary)
2417 );
85ba66b8 2418
2419 aodTrack->SetHitsPatternInTrigCh(esdMuTrack->GetHitsPatternInTrigCh());
2420 Int_t track2Trigger = esdMuTrack->GetMatchTrigger();
2421 aodTrack->SetMatchTrigger(track2Trigger);
2422 if (track2Trigger)
2423 aodTrack->SetChi2MatchTrigger(esdMuTrack->GetChi2MatchTrigger());
2424 else
2425 aodTrack->SetChi2MatchTrigger(0.);
f29f1726 2426 }
2427
2428 // Access to the AOD container of clusters
2429 TClonesArray &clusters = *(aod->GetClusters());
2430 Int_t jClusters=0;
2431
2432 // Calo Clusters
2433 Int_t nClusters = esd->GetNumberOfCaloClusters();
2434
2435 for (Int_t iClust=0; iClust<nClusters; ++iClust) {
2436
2437 AliESDCaloCluster * cluster = esd->GetCaloCluster(iClust);
2438
2439 Int_t id = cluster->GetID();
2440 Int_t label = -1;
53ec9628 2441 Float_t energy = cluster->E();
2442 cluster->GetPosition(posF);
f29f1726 2443 AliAODVertex *prodVertex = primary;
2444 AliAODTrack *primTrack = NULL;
2445 Char_t ttype=AliAODCluster::kUndef;
85ba66b8 2446
f29f1726 2447 if (cluster->IsPHOS()) ttype=AliAODCluster::kPHOSNeutral;
2448 else if (cluster->IsEMCAL()) {
85ba66b8 2449
f29f1726 2450 if (cluster->GetClusterType() == AliESDCaloCluster::kPseudoCluster)
2451 ttype = AliAODCluster::kEMCALPseudoCluster;
2452 else
2453 ttype = AliAODCluster::kEMCALClusterv1;
85ba66b8 2454
f29f1726 2455 }
85ba66b8 2456
f29f1726 2457 new(clusters[jClusters++]) AliAODCluster(id,
2458 label,
2459 energy,
2460 pos,
2461 NULL, // no covariance matrix provided
2462 NULL, // no pid for clusters provided
2463 prodVertex,
2464 primTrack,
2465 ttype);
85ba66b8 2466
f29f1726 2467 } // end of loop on calo clusters
85ba66b8 2468
2469 // tracklets
2470 const AliMultiplicity *mult = esd->GetMultiplicity();
2471 if (mult) {
2472 if (mult->GetNumberOfTracklets()>0) {
2473 aod->GetTracklets()->CreateContainer(mult->GetNumberOfTracklets());
2474
2475 for (Int_t n=0; n<mult->GetNumberOfTracklets(); n++) {
2476 aod->GetTracklets()->SetTracklet(n, mult->GetTheta(n), mult->GetPhi(n), mult->GetDeltaPhi(n), mult->GetLabel(n));
2477 }
2478 }
2479 } else {
2480 Printf("ERROR: AliMultiplicity could not be retrieved from ESD");
2481 }
2482
f29f1726 2483 delete [] usedTrack;
2484 delete [] usedV0;
2485 delete [] usedKink;
85ba66b8 2486
f29f1726 2487 // fill the tree for this event
2488 aodTree->Fill();
2489 } // end of event loop
85ba66b8 2490
f29f1726 2491 aodTree->GetUserInfo()->Add(aod);
85ba66b8 2492
f29f1726 2493 // close ESD file
2494 esdFile->Close();
85ba66b8 2495
f29f1726 2496 // write the tree to the specified file
2497 aodFile = aodTree->GetCurrentFile();
2498 aodFile->cd();
2499 aodTree->Write();
85ba66b8 2500
a7807689 2501 return;
2502}
2503
af885e0f 2504void AliReconstruction::WriteAlignmentData(AliESDEvent* esd)
98937d93 2505{
2506 // Write space-points which are then used in the alignment procedures
2507 // For the moment only ITS, TRD and TPC
2508
2509 // Load TOF clusters
d528ee75 2510 if (fTracker[3]){
2511 fLoader[3]->LoadRecPoints("read");
2512 TTree* tree = fLoader[3]->TreeR();
2513 if (!tree) {
2514 AliError(Form("Can't get the %s cluster tree", fgkDetectorName[3]));
2515 return;
2516 }
2517 fTracker[3]->LoadClusters(tree);
98937d93 2518 }
98937d93 2519 Int_t ntracks = esd->GetNumberOfTracks();
2520 for (Int_t itrack = 0; itrack < ntracks; itrack++)
2521 {
2522 AliESDtrack *track = esd->GetTrack(itrack);
2523 Int_t nsp = 0;
ef7253ac 2524 Int_t idx[200];
98937d93 2525 for (Int_t iDet = 3; iDet >= 0; iDet--)
2526 nsp += track->GetNcls(iDet);
2527 if (nsp) {
2528 AliTrackPointArray *sp = new AliTrackPointArray(nsp);
2529 track->SetTrackPointArray(sp);
2530 Int_t isptrack = 0;
2531 for (Int_t iDet = 3; iDet >= 0; iDet--) {
2532 AliTracker *tracker = fTracker[iDet];
2533 if (!tracker) continue;
2534 Int_t nspdet = track->GetNcls(iDet);
98937d93 2535 if (nspdet <= 0) continue;
2536 track->GetClusters(iDet,idx);
2537 AliTrackPoint p;
2538 Int_t isp = 0;
2539 Int_t isp2 = 0;
2540 while (isp < nspdet) {
2541 Bool_t isvalid = tracker->GetTrackPoint(idx[isp2],p); isp2++;
160db090 2542 const Int_t kNTPCmax = 159;
2543 if (iDet==1 && isp2>kNTPCmax) break; // to be fixed
98937d93 2544 if (!isvalid) continue;
2545 sp->AddPoint(isptrack,&p); isptrack++; isp++;
2546 }
98937d93 2547 }
2548 }
2549 }
d528ee75 2550 if (fTracker[3]){
2551 fTracker[3]->UnloadClusters();
2552 fLoader[3]->UnloadRecPoints();
2553 }
98937d93 2554}
2e3550da 2555
2556//_____________________________________________________________________________
af885e0f 2557void AliReconstruction::FillRawDataErrorLog(Int_t iEvent, AliESDEvent* esd)
2e3550da 2558{
2559 // The method reads the raw-data error log
2560 // accumulated within the rawReader.
2561 // It extracts the raw-data errors related to
2562 // the current event and stores them into
2563 // a TClonesArray inside the esd object.
2564
2565 if (!fRawReader) return;
2566
2567 for(Int_t i = 0; i < fRawReader->GetNumberOfErrorLogs(); i++) {
2568
2569 AliRawDataErrorLog *log = fRawReader->GetErrorLog(i);
2570 if (!log) continue;
2571 if (iEvent != log->GetEventNumber()) continue;
2572
2573 esd->AddRawDataErrorLog(log);
2574 }
2575
2576}
46698ae4 2577
2578TNamed* AliReconstruction::CopyFileToTNamed(TString fPath,TString fName){
b545009a 2579 // Dump a file content into a char in TNamed
46698ae4 2580 ifstream in;
2581 in.open(fPath.Data(),ios::in | ios::binary|ios::ate);
2582 Int_t kBytes = (Int_t)in.tellg();
2583 printf("Size: %d \n",kBytes);
2584 TNamed *fn = 0;
2585 if(in.good()){
2586 char* memblock = new char [kBytes];
2587 in.seekg (0, ios::beg);
2588 in.read (memblock, kBytes);
2589 in.close();
2590 TString fData(memblock,kBytes);
2591 fn = new TNamed(fName,fData);
2592 printf("fData Size: %d \n",fData.Sizeof());
2593 printf("fName Size: %d \n",fName.Sizeof());
2594 printf("fn Size: %d \n",fn->Sizeof());
2595 delete[] memblock;
2596 }
2597 else{
2598 AliInfo(Form("Could not Open %s\n",fPath.Data()));
2599 }
2600
2601 return fn;
2602}
2603
2604void AliReconstruction::TNamedToFile(TTree* fTree, TString fName){
46698ae4 2605 // This is not really needed in AliReconstruction at the moment
2606 // but can serve as a template
2607
2608 TList *fList = fTree->GetUserInfo();
2609 TNamed *fn = (TNamed*)fList->FindObject(fName.Data());
2610 printf("fn Size: %d \n",fn->Sizeof());
2611
2612 TString fTmp(fn->GetName()); // to be 100% sure in principle fName also works
2613 const char* cdata = fn->GetTitle();
2614 printf("fTmp Size %d\n",fTmp.Sizeof());
2615
2616 int size = fn->Sizeof()-fTmp.Sizeof()-sizeof(UChar_t)-sizeof(Int_t); // see dfinition of TString::SizeOf()...
2617 printf("calculated size %d\n",size);
2618 ofstream out(fName.Data(),ios::out | ios::binary);
2619 out.write(cdata,size);
2620 out.close();
2621
2622}
2623
a5fa6165 2624//_____________________________________________________________________________
2625AliQualAssDataMaker * AliReconstruction::GetQualAssDataMaker(Int_t iDet)
2626{
2627// get the quality assurance data maker object and the loader for a detector
2628
2629 if (fQualAssDataMaker[iDet])
2630 return fQualAssDataMaker[iDet];
2631
2632 // load the QA data maker object
2633 TPluginManager* pluginManager = gROOT->GetPluginManager();
2634 TString detName = fgkDetectorName[iDet];
2635 TString qadmName = "Ali" + detName + "QualAssDataMaker";
2636 if (gAlice && !gAlice->GetDetector(detName) && (detName != "HLT"))
2637 return NULL;
2638
2639 AliQualAssDataMaker * qadm = NULL;
2640 // first check if a plugin is defined for the quality assurance data maker
2641 TPluginHandler* pluginHandler = pluginManager->FindHandler("AliQualAssDataMaker", detName);
2642 // if not, add a plugin for it
2643 if (!pluginHandler) {
2644 AliDebug(1, Form("defining plugin for %s", qadmName.Data()));
2645 TString libs = gSystem->GetLibraries();
2646 if (libs.Contains("lib" + detName + "base.so") ||
2647 (gSystem->Load("lib" + detName + "base.so") >= 0)) {
2648 pluginManager->AddHandler("AliQualAssDataMaker", detName,
2649 qadmName, detName + "qadm", qadmName + "()");
2650 } else {
2651 pluginManager->AddHandler("AliQualAssDataMaker", detName,
2652 qadmName, detName, qadmName + "()");
2653 }
2654 pluginHandler = pluginManager->FindHandler("AliQualAssDataMaker", detName);
2655 }
2656 if (pluginHandler && (pluginHandler->LoadPlugin() == 0)) {
2657 qadm = (AliQualAssDataMaker *) pluginHandler->ExecPlugin(0);
2658 }
2659 if (qadm) {
2660 // TObject* obj = fOptions.FindObject(detName.Data());
2661 // if (obj) reconstructor->SetOption(obj->GetTitle());
2662 fQualAssDataMaker[iDet] = qadm;
2663 }
2664
2665 // get or create the loader
2666 fLoader[iDet] = fRunLoader->GetLoader(detName + "Loader");
2667 if (!fLoader[iDet]) {
2668 AliConfig::Instance()
2669 ->CreateDetectorFolders(fRunLoader->GetEventFolder(),
2670 detName, detName);
2671 // first check if a plugin is defined for the loader
2672 pluginHandler =
2673 pluginManager->FindHandler("AliLoader", detName);
2674 // if not, add a plugin for it
2675 if (!pluginHandler) {
2676 TString loaderName = "Ali" + detName + "Loader";
2677 AliDebug(1, Form("defining plugin for %s", loaderName.Data()));
2678 pluginManager->AddHandler("AliLoader", detName,
2679 loaderName, detName + "base",
2680 loaderName + "(const char*, TFolder*)");
2681 pluginHandler = pluginManager->FindHandler("AliLoader", detName);
2682 }
2683 if (pluginHandler && (pluginHandler->LoadPlugin() == 0)) {
2684 fLoader[iDet] =
2685 (AliLoader*) pluginHandler->ExecPlugin(2, detName.Data(),
2686 fRunLoader->GetEventFolder());
2687 }
2688 if (!fLoader[iDet]) { // use default loader
2689 fLoader[iDet] = new AliLoader(detName, fRunLoader->GetEventFolder());
2690 }
2691 if (!fLoader[iDet]) {
2692 AliWarning(Form("couldn't get loader for %s", detName.Data()));
2693 if (fStopOnError) return NULL;
2694 } else {
2695 fRunLoader->AddLoader(fLoader[iDet]);
2696 fRunLoader->CdGAFile();
2697 if (gFile && !gFile->IsWritable()) gFile->ReOpen("UPDATE");
2698 fRunLoader->Write(0, TObject::kOverwrite);
2699 }
2700 }
2701
2702 return qadm;
2703}
2704
2705//_____________________________________________________________________________
2706Bool_t AliReconstruction::RunQualAss(const char* detectors, AliESDEvent *& esd)
2707{
2708 // run the Quality Assurance data producer
2709
2710 AliCodeTimerAuto("")
2711 TString detStr = detectors;
2712 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
2713 if (!IsSelected(fgkDetectorName[iDet], detStr))
2714 continue;
2715 AliQualAssDataMaker * qadm = GetQualAssDataMaker(iDet);
2716 if (!qadm)
2717 continue;
2718 AliCodeTimerStart(Form("running quality assurance data maker for %s", fgkDetectorName[iDet]));
2719 AliInfo(Form("running quality assurance data maker for %s", fgkDetectorName[iDet]));
2720
2721 qadm->SetData(esd) ;
2722 qadm->Exec(AliQualAss::kESDS) ;
2723
2724 AliCodeTimerStop(Form("running quality assurance data maker for %s", fgkDetectorName[iDet]));
2725 }
2726 if ((detStr.CompareTo("ALL") != 0) && !detStr.IsNull()) {
2727 AliError(Form("the following detectors were not found: %s",
2728 detStr.Data()));
2729 if (fStopOnError)
2730 return kFALSE;
2731 }
2732
2733 return kTRUE;
2734}