Bug in AliZDCQADataMakerRec corrected
[u/mrichter/AliRoot.git] / STEER / AliReconstruction.cxx
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596a855f 1/**************************************************************************
2 * Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. *
3 * *
4 * Author: The ALICE Off-line Project. *
5 * Contributors are mentioned in the code where appropriate. *
6 * *
7 * Permission to use, copy, modify and distribute this software and its *
8 * documentation strictly for non-commercial purposes is hereby granted *
9 * without fee, provided that the above copyright notice appears in all *
10 * copies and that both the copyright notice and this permission notice *
11 * appear in the supporting documentation. The authors make no claims *
12 * about the suitability of this software for any purpose. It is *
13 * provided "as is" without express or implied warranty. *
14 **************************************************************************/
15
16/* $Id$ */
17
18///////////////////////////////////////////////////////////////////////////////
19// //
20// class for running the reconstruction //
21// //
22// Clusters and tracks are created for all detectors and all events by //
23// typing: //
24// //
25// AliReconstruction rec; //
26// rec.Run(); //
27// //
28// The Run method returns kTRUE in case of successful execution. //
c71de921 29// //
30// If the input to the reconstruction are not simulated digits but raw data, //
31// this can be specified by an argument of the Run method or by the method //
32// //
33// rec.SetInput("..."); //
34// //
35// The input formats and the corresponding argument are: //
36// - DDL raw data files: directory name, ends with "/" //
37// - raw data root file: root file name, extension ".root" //
38// - raw data DATE file: DATE file name, any other non-empty string //
39// - MC root files : empty string, default //
40// //
b26c3770 41// By default all events are reconstructed. The reconstruction can be //
42// limited to a range of events by giving the index of the first and the //
43// last event as an argument to the Run method or by calling //
44// //
45// rec.SetEventRange(..., ...); //
46// //
47// The index -1 (default) can be used for the last event to indicate no //
48// upper limit of the event range. //
49// //
973388c2 50// In case of raw-data reconstruction the user can modify the default //
51// number of events per digits/clusters/tracks file. In case the option //
52// is not used the number is set 1. In case the user provides 0, than //
53// the number of events is equal to the number of events inside the //
54// raw-data file (i.e. one digits/clusters/tracks file): //
55// //
56// rec.SetNumberOfEventsPerFile(...); //
57// //
58// //
596a855f 59// The name of the galice file can be changed from the default //
e583c30d 60// "galice.root" by passing it as argument to the AliReconstruction //
61// constructor or by //
596a855f 62// //
63// rec.SetGAliceFile("..."); //
64// //
59697224 65// The local reconstruction can be switched on or off for individual //
66// detectors by //
596a855f 67// //
59697224 68// rec.SetRunLocalReconstruction("..."); //
596a855f 69// //
70// The argument is a (case sensitive) string with the names of the //
71// detectors separated by a space. The special string "ALL" selects all //
72// available detectors. This is the default. //
73// //
c71de921 74// The reconstruction of the primary vertex position can be switched off by //
75// //
76// rec.SetRunVertexFinder(kFALSE); //
77// //
b8cd5251 78// The tracking and the creation of ESD tracks can be switched on for //
79// selected detectors by //
596a855f 80// //
b8cd5251 81// rec.SetRunTracking("..."); //
596a855f 82// //
c84a5e9e 83// Uniform/nonuniform field tracking switches (default: uniform field) //
84// //
1d99986f 85// rec.SetUniformFieldTracking(); ( rec.SetUniformFieldTracking(kFALSE); ) //
c84a5e9e 86// //
596a855f 87// The filling of additional ESD information can be steered by //
88// //
89// rec.SetFillESD("..."); //
90// //
b8cd5251 91// Again, for both methods the string specifies the list of detectors. //
92// The default is "ALL". //
93// //
94// The call of the shortcut method //
95// //
96// rec.SetRunReconstruction("..."); //
97// //
98// is equivalent to calling SetRunLocalReconstruction, SetRunTracking and //
99// SetFillESD with the same detector selecting string as argument. //
596a855f 100// //
c71de921 101// The reconstruction requires digits or raw data as input. For the creation //
102// of digits and raw data have a look at the class AliSimulation. //
596a855f 103// //
cd0b062e 104// The input data of a detector can be replaced by the corresponding HLT //
105// data by calling (usual detector string) //
106// SetUseHLTData("..."); //
107// //
24f7a148 108// For debug purposes the method SetCheckPointLevel can be used. If the //
109// argument is greater than 0, files with ESD events will be written after //
110// selected steps of the reconstruction for each event: //
111// level 1: after tracking and after filling of ESD (final) //
112// level 2: in addition after each tracking step //
113// level 3: in addition after the filling of ESD for each detector //
114// If a final check point file exists for an event, this event will be //
115// skipped in the reconstruction. The tracking and the filling of ESD for //
116// a detector will be skipped as well, if the corresponding check point //
117// file exists. The ESD event will then be loaded from the file instead. //
118// //
596a855f 119///////////////////////////////////////////////////////////////////////////////
120
024a7e64 121#include <TArrayF.h>
122#include <TFile.h>
444753c6 123#include <TList.h>
024a7e64 124#include <TSystem.h>
125#include <TROOT.h>
126#include <TPluginManager.h>
3103d196 127#include <TGeoManager.h>
2bdb9d38 128#include <TLorentzVector.h>
3dd9f9e3 129#include <TArrayS.h>
130#include <TArrayD.h>
3c3709c4 131#include <TObjArray.h>
596a855f 132
133#include "AliReconstruction.h"
87932dab 134#include "AliCodeTimer.h"
b8cd5251 135#include "AliReconstructor.h"
815c2b38 136#include "AliLog.h"
596a855f 137#include "AliRunLoader.h"
138#include "AliRun.h"
b649205a 139#include "AliRawReaderFile.h"
140#include "AliRawReaderDate.h"
141#include "AliRawReaderRoot.h"
001397cd 142#include "AliRawEventHeaderBase.h"
af885e0f 143#include "AliESDEvent.h"
faffd83e 144#include "AliESDMuonTrack.h"
1d99986f 145#include "AliESDfriend.h"
2257f27e 146#include "AliESDVertex.h"
faffd83e 147#include "AliESDcascade.h"
148#include "AliESDkink.h"
149#include "AliESDtrack.h"
150#include "AliESDCaloCluster.h"
e649177a 151#include "AliESDCaloCells.h"
32e449be 152#include "AliMultiplicity.h"
c84a5e9e 153#include "AliTracker.h"
2257f27e 154#include "AliVertexer.h"
c5e3e5d1 155#include "AliVertexerTracks.h"
5e4ff34d 156#include "AliV0vertexer.h"
157#include "AliCascadeVertexer.h"
596a855f 158#include "AliHeader.h"
159#include "AliGenEventHeader.h"
b26c3770 160#include "AliPID.h"
596a855f 161#include "AliESDpid.h"
ff8bb5ae 162#include "AliESDtrack.h"
3dd9f9e3 163#include "AliESDPmdTrack.h"
f3a97c86 164
08e1a23e 165#include "AliESDTagCreator.h"
a1069ee1 166#include "AliAODTagCreator.h"
f3a97c86 167
25be1e5c 168#include "AliGeomManager.h"
98937d93 169#include "AliTrackPointArray.h"
b0314964 170#include "AliCDBManager.h"
795e4a22 171#include "AliCDBStorage.h"
6bae477a 172#include "AliCDBEntry.h"
173#include "AliAlignObj.h"
f3a97c86 174
b647652d 175#include "AliCentralTrigger.h"
b024fd7f 176#include "AliTriggerConfiguration.h"
177#include "AliTriggerClass.h"
b647652d 178#include "AliCTPRawStream.h"
179
04236e67 180#include "AliQADataMakerRec.h"
aa3c69a9 181#include "AliGlobalQADataMaker.h"
c65c502a 182#include "AliQA.h"
183#include "AliQADataMakerSteer.h"
f29f1726 184
7167ae53 185#include "AliPlaneEff.h"
186
0f88822a 187#include "AliSysInfo.h" // memory snapshots
cd0b062e 188#include "AliRawHLTManager.h"
0f88822a 189
6efecea1 190
596a855f 191ClassImp(AliReconstruction)
192
193
194//_____________________________________________________________________________
b384f8a4 195const char* AliReconstruction::fgkDetectorName[AliReconstruction::fgkNDetectors] = {"ITS", "TPC", "TRD", "TOF", "PHOS", "HMPID", "EMCAL", "MUON", "FMD", "ZDC", "PMD", "T0", "VZERO", "ACORDE", "HLT"};
c757bafd 196
197//_____________________________________________________________________________
795e4a22 198AliReconstruction::AliReconstruction(const char* gAliceFilename,
e583c30d 199 const char* name, const char* title) :
200 TNamed(name, title),
201
c84a5e9e 202 fUniformField(kTRUE),
2257f27e 203 fRunVertexFinder(kTRUE),
a84e2607 204 fRunVertexFinderTracks(kTRUE),
1f46a9ae 205 fRunHLTTracking(kFALSE),
e66fbafb 206 fRunMuonTracking(kFALSE),
d1683eef 207 fRunV0Finder(kTRUE),
208 fRunCascadeFinder(kTRUE),
1d99986f 209 fStopOnError(kFALSE),
210 fWriteAlignmentData(kFALSE),
211 fWriteESDfriend(kFALSE),
a7807689 212 fWriteAOD(kFALSE),
b647652d 213 fFillTriggerESD(kTRUE),
1d99986f 214
7f68891d 215 fCleanESD(kTRUE),
a023d8d8 216 fV0DCAmax(3.),
217 fV0CsPmin(0.),
7f68891d 218 fDmax(50.),
219 fZmax(50.),
220
1d99986f 221 fRunLocalReconstruction("ALL"),
b8cd5251 222 fRunTracking("ALL"),
e583c30d 223 fFillESD("ALL"),
48ce48d1 224 fUseTrackingErrorsForAlignment(""),
e583c30d 225 fGAliceFileName(gAliceFilename),
b649205a 226 fInput(""),
35042093 227 fEquipIdMap(""),
b26c3770 228 fFirstEvent(0),
229 fLastEvent(-1),
973388c2 230 fNumberOfEventsPerFile(1),
24f7a148 231 fCheckPointLevel(0),
b8cd5251 232 fOptions(),
6bae477a 233 fLoadAlignFromCDB(kTRUE),
234 fLoadAlignData("ALL"),
46698ae4 235 fESDPar(""),
cd0b062e 236 fUseHLTData(),
e583c30d 237
238 fRunLoader(NULL),
b649205a 239 fRawReader(NULL),
cd0b062e 240 fParentRawReader(NULL),
b8cd5251 241
98937d93 242 fVertexer(NULL),
9178838a 243 fDiamondProfile(NULL),
43c9dae1 244 fDiamondProfileTPC(NULL),
87317a47 245 fMeanVertexConstraint(kTRUE),
98937d93 246
444753c6 247 fGRPList(NULL),
248
6bae477a 249 fAlignObjArray(NULL),
795e4a22 250 fCDBUri(),
759c1df1 251 fSpecCDBUri(),
795e4a22 252 fInitCDBCalled(kFALSE),
253 fSetRunNumberFromDataCalled(kFALSE),
7e963665 254 fRunQA(kTRUE),
6b150027 255 fRunGlobalQA(kTRUE),
7167ae53 256 fInLoopQA(kFALSE),
e4a998ed 257 fSameQACycle(kFALSE),
7167ae53 258
21a3aa09 259 fRunPlaneEff(kFALSE),
260
261 fesd(NULL),
262 fhltesd(NULL),
263 fesdf(NULL),
264 ffile(NULL),
265 ftree(NULL),
266 fhlttree(NULL),
267 ffileOld(NULL),
268 ftreeOld(NULL),
269 fhlttreeOld(NULL),
270 ftVertexer(NULL),
271 fIsNewRunLoader(kFALSE)
596a855f 272{
273// create reconstruction object with default parameters
b8cd5251 274
275 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
276 fReconstructor[iDet] = NULL;
277 fLoader[iDet] = NULL;
278 fTracker[iDet] = NULL;
7e963665 279 fQADataMaker[iDet] = NULL;
280 fQACycles[iDet] = 999999;
b8cd5251 281 }
aa3c69a9 282 fQADataMaker[fgkNDetectors]=NULL; //Global QA
e47c4c2e 283 AliPID pid;
596a855f 284}
285
286//_____________________________________________________________________________
287AliReconstruction::AliReconstruction(const AliReconstruction& rec) :
e583c30d 288 TNamed(rec),
289
c84a5e9e 290 fUniformField(rec.fUniformField),
2257f27e 291 fRunVertexFinder(rec.fRunVertexFinder),
a84e2607 292 fRunVertexFinderTracks(rec.fRunVertexFinderTracks),
1f46a9ae 293 fRunHLTTracking(rec.fRunHLTTracking),
e66fbafb 294 fRunMuonTracking(rec.fRunMuonTracking),
d1683eef 295 fRunV0Finder(rec.fRunV0Finder),
296 fRunCascadeFinder(rec.fRunCascadeFinder),
1d99986f 297 fStopOnError(rec.fStopOnError),
298 fWriteAlignmentData(rec.fWriteAlignmentData),
299 fWriteESDfriend(rec.fWriteESDfriend),
a7807689 300 fWriteAOD(rec.fWriteAOD),
b647652d 301 fFillTriggerESD(rec.fFillTriggerESD),
1d99986f 302
7f68891d 303 fCleanESD(rec.fCleanESD),
a023d8d8 304 fV0DCAmax(rec.fV0DCAmax),
5e5c1aa9 305 fV0CsPmin(rec.fV0CsPmin),
7f68891d 306 fDmax(rec.fDmax),
307 fZmax(rec.fZmax),
308
1d99986f 309 fRunLocalReconstruction(rec.fRunLocalReconstruction),
e583c30d 310 fRunTracking(rec.fRunTracking),
311 fFillESD(rec.fFillESD),
48ce48d1 312 fUseTrackingErrorsForAlignment(rec.fUseTrackingErrorsForAlignment),
e583c30d 313 fGAliceFileName(rec.fGAliceFileName),
b649205a 314 fInput(rec.fInput),
35042093 315 fEquipIdMap(rec.fEquipIdMap),
b26c3770 316 fFirstEvent(rec.fFirstEvent),
317 fLastEvent(rec.fLastEvent),
973388c2 318 fNumberOfEventsPerFile(rec.fNumberOfEventsPerFile),
24f7a148 319 fCheckPointLevel(0),
b8cd5251 320 fOptions(),
6bae477a 321 fLoadAlignFromCDB(rec.fLoadAlignFromCDB),
322 fLoadAlignData(rec.fLoadAlignData),
46698ae4 323 fESDPar(rec.fESDPar),
2972d4eb 324 fUseHLTData(rec.fUseHLTData),
e583c30d 325
326 fRunLoader(NULL),
b649205a 327 fRawReader(NULL),
2972d4eb 328 fParentRawReader(NULL),
b8cd5251 329
98937d93 330 fVertexer(NULL),
9178838a 331 fDiamondProfile(NULL),
43c9dae1 332 fDiamondProfileTPC(NULL),
87317a47 333 fMeanVertexConstraint(rec.fMeanVertexConstraint),
98937d93 334
444753c6 335 fGRPList(NULL),
336
6bae477a 337 fAlignObjArray(rec.fAlignObjArray),
ec92bee0 338 fCDBUri(rec.fCDBUri),
7e963665 339 fSpecCDBUri(),
795e4a22 340 fInitCDBCalled(rec.fInitCDBCalled),
341 fSetRunNumberFromDataCalled(rec.fSetRunNumberFromDataCalled),
aa3c69a9 342 fRunQA(rec.fRunQA),
343 fRunGlobalQA(rec.fRunGlobalQA),
7167ae53 344 fInLoopQA(rec.fInLoopQA),
e4a998ed 345 fSameQACycle(rec.fSameQACycle),
21a3aa09 346 fRunPlaneEff(rec.fRunPlaneEff),
347
348 fesd(NULL),
349 fhltesd(NULL),
350 fesdf(NULL),
351 ffile(NULL),
352 ftree(NULL),
353 fhlttree(NULL),
354 ffileOld(NULL),
355 ftreeOld(NULL),
356 fhlttreeOld(NULL),
357 ftVertexer(NULL),
358 fIsNewRunLoader(rec.fIsNewRunLoader)
596a855f 359{
360// copy constructor
361
ec92bee0 362 for (Int_t i = 0; i < rec.fOptions.GetEntriesFast(); i++) {
efd2085e 363 if (rec.fOptions[i]) fOptions.Add(rec.fOptions[i]->Clone());
364 }
b8cd5251 365 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
366 fReconstructor[iDet] = NULL;
367 fLoader[iDet] = NULL;
368 fTracker[iDet] = NULL;
7e963665 369 fQADataMaker[iDet] = NULL;
370 fQACycles[iDet] = rec.fQACycles[iDet];
b8cd5251 371 }
aa3c69a9 372 fQADataMaker[fgkNDetectors]=NULL; //Global QA
ec92bee0 373 for (Int_t i = 0; i < rec.fSpecCDBUri.GetEntriesFast(); i++) {
374 if (rec.fSpecCDBUri[i]) fSpecCDBUri.Add(rec.fSpecCDBUri[i]->Clone());
375 }
596a855f 376}
377
378//_____________________________________________________________________________
379AliReconstruction& AliReconstruction::operator = (const AliReconstruction& rec)
380{
381// assignment operator
382
383 this->~AliReconstruction();
384 new(this) AliReconstruction(rec);
385 return *this;
386}
387
388//_____________________________________________________________________________
389AliReconstruction::~AliReconstruction()
390{
391// clean up
392
e583c30d 393 CleanUp();
efd2085e 394 fOptions.Delete();
ec92bee0 395 fSpecCDBUri.Delete();
87932dab 396
397 AliCodeTimer::Instance()->Print();
596a855f 398}
399
024cf675 400//_____________________________________________________________________________
795e4a22 401void AliReconstruction::InitCDB()
024cf675 402{
403// activate a default CDB storage
404// First check if we have any CDB storage set, because it is used
405// to retrieve the calibration and alignment constants
406
795e4a22 407 if (fInitCDBCalled) return;
408 fInitCDBCalled = kTRUE;
409
024cf675 410 AliCDBManager* man = AliCDBManager::Instance();
ec92bee0 411 if (man->IsDefaultStorageSet())
024cf675 412 {
413 AliWarning("!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!");
ec92bee0 414 AliWarning("Default CDB storage has been already set !");
415 AliWarning(Form("Ignoring the default storage declared in AliReconstruction: %s",fCDBUri.Data()));
024cf675 416 AliWarning("!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!");
795e4a22 417 fCDBUri = man->GetDefaultStorage()->GetURI();
ec92bee0 418 }
419 else {
795e4a22 420 if (fCDBUri.Length() > 0)
421 {
422 AliDebug(2,"!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!");
423 AliDebug(2, Form("Default CDB storage is set to: %s", fCDBUri.Data()));
424 AliDebug(2, "!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!");
425 } else {
426 fCDBUri="local://$ALICE_ROOT";
427 AliWarning("!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!");
428 AliWarning("Default CDB storage not yet set !!!!");
429 AliWarning(Form("Setting it now to: %s", fCDBUri.Data()));
430 AliWarning("!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!");
431
432 }
ec92bee0 433 man->SetDefaultStorage(fCDBUri);
434 }
435
436 // Now activate the detector specific CDB storage locations
c3a7b59a 437 for (Int_t i = 0; i < fSpecCDBUri.GetEntriesFast(); i++) {
438 TObject* obj = fSpecCDBUri[i];
439 if (!obj) continue;
b8ec52f6 440 AliDebug(2, "!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!");
441 AliDebug(2, Form("Specific CDB storage for %s is set to: %s",obj->GetName(),obj->GetTitle()));
442 AliDebug(2, "!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!");
c3a7b59a 443 man->SetSpecificStorage(obj->GetName(), obj->GetTitle());
ec92bee0 444 }
795e4a22 445
024cf675 446}
447
448//_____________________________________________________________________________
449void AliReconstruction::SetDefaultStorage(const char* uri) {
ec92bee0 450// Store the desired default CDB storage location
451// Activate it later within the Run() method
024cf675 452
ec92bee0 453 fCDBUri = uri;
024cf675 454
455}
456
457//_____________________________________________________________________________
c3a7b59a 458void AliReconstruction::SetSpecificStorage(const char* calibType, const char* uri) {
ec92bee0 459// Store a detector-specific CDB storage location
460// Activate it later within the Run() method
024cf675 461
c3a7b59a 462 AliCDBPath aPath(calibType);
463 if(!aPath.IsValid()){
464 // if calibType is not wildcard but it is a valid detector, add "/*" to make it a valid path
465 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
466 if(!strcmp(calibType, fgkDetectorName[iDet])) {
467 aPath.SetPath(Form("%s/*", calibType));
468 AliInfo(Form("Path for specific storage set to %s", aPath.GetPath().Data()));
469 break;
470 }
471 }
472 if(!aPath.IsValid()){
473 AliError(Form("Not a valid path or detector: %s", calibType));
474 return;
475 }
476 }
477
53dd3c3d 478// // check that calibType refers to a "valid" detector name
479// Bool_t isDetector = kFALSE;
480// for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
481// TString detName = fgkDetectorName[iDet];
482// if(aPath.GetLevel0() == detName) {
483// isDetector = kTRUE;
484// break;
485// }
486// }
487//
488// if(!isDetector) {
489// AliError(Form("Not a valid detector: %s", aPath.GetLevel0().Data()));
490// return;
491// }
c3a7b59a 492
493 TObject* obj = fSpecCDBUri.FindObject(aPath.GetPath().Data());
ec92bee0 494 if (obj) fSpecCDBUri.Remove(obj);
c3a7b59a 495 fSpecCDBUri.Add(new TNamed(aPath.GetPath().Data(), uri));
024cf675 496
497}
498
6bae477a 499//_____________________________________________________________________________
795e4a22 500Bool_t AliReconstruction::SetRunNumberFromData()
6bae477a 501{
502 // The method is called in Run() in order
503 // to set a correct run number.
504 // In case of raw data reconstruction the
505 // run number is taken from the raw data header
506
795e4a22 507 if (fSetRunNumberFromDataCalled) return kTRUE;
508 fSetRunNumberFromDataCalled = kTRUE;
509
510 AliCDBManager* man = AliCDBManager::Instance();
511
512 if(man->GetRun() > 0) {
21a3aa09 513 AliWarning("Run number is taken from raw-event header! Ignoring settings in AliCDBManager!");
795e4a22 514 }
515
516 if (!fRunLoader) {
6bae477a 517 AliError("No run loader is found !");
518 return kFALSE;
519 }
520 // read run number from gAlice
ec92bee0 521 if(fRunLoader->GetAliRun())
f2ee4290 522 AliCDBManager::Instance()->SetRun(fRunLoader->GetHeader()->GetRun());
ec92bee0 523 else {
524 if(fRawReader) {
525 if(fRawReader->NextEvent()) {
526 AliCDBManager::Instance()->SetRun(fRawReader->GetRunNumber());
527 fRawReader->RewindEvents();
528 }
529 else {
21a3aa09 530 if(man->GetRun() > 0) {
531 AliWarning("No raw events is found ! Using settings in AliCDBManager !");
532 man->Print();
533 return kTRUE;
534 }
535 else {
536 AliWarning("Neither raw events nor settings in AliCDBManager are found !");
537 return kFALSE;
538 }
ec92bee0 539 }
540 }
541 else {
542 AliError("Neither gAlice nor RawReader objects are found !");
543 return kFALSE;
544 }
6bae477a 545 }
795e4a22 546
547 man->Print();
548
6bae477a 549 return kTRUE;
550}
551
552//_____________________________________________________________________________
795e4a22 553void AliReconstruction::SetCDBLock() {
554 // Set CDB lock: from now on it is forbidden to reset the run number
555 // or the default storage or to activate any further storage!
556
557 AliCDBManager::Instance()->SetLock(1);
558}
559
560//_____________________________________________________________________________
6bae477a 561Bool_t AliReconstruction::MisalignGeometry(const TString& detectors)
562{
563 // Read the alignment objects from CDB.
564 // Each detector is supposed to have the
565 // alignment objects in DET/Align/Data CDB path.
566 // All the detector objects are then collected,
567 // sorted by geometry level (starting from ALIC) and
568 // then applied to the TGeo geometry.
569 // Finally an overlaps check is performed.
570
571 // Load alignment data from CDB and fill fAlignObjArray
572 if(fLoadAlignFromCDB){
6bae477a 573
25be1e5c 574 TString detStr = detectors;
575 TString loadAlObjsListOfDets = "";
576
577 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
578 if (!IsSelected(fgkDetectorName[iDet], detStr)) continue;
579 loadAlObjsListOfDets += fgkDetectorName[iDet];
580 loadAlObjsListOfDets += " ";
581 } // end loop over detectors
53dd3c3d 582 loadAlObjsListOfDets.Prepend("GRP "); //add alignment objects for non-sensitive modules
98e303d9 583 AliGeomManager::ApplyAlignObjsFromCDB(loadAlObjsListOfDets.Data());
25be1e5c 584 }else{
585 // Check if the array with alignment objects was
586 // provided by the user. If yes, apply the objects
587 // to the present TGeo geometry
588 if (fAlignObjArray) {
589 if (gGeoManager && gGeoManager->IsClosed()) {
98e303d9 590 if (AliGeomManager::ApplyAlignObjsToGeom(*fAlignObjArray) == kFALSE) {
25be1e5c 591 AliError("The misalignment of one or more volumes failed!"
592 "Compare the list of simulated detectors and the list of detector alignment data!");
593 return kFALSE;
594 }
595 }
596 else {
597 AliError("Can't apply the misalignment! gGeoManager doesn't exist or it is still opened!");
6bae477a 598 return kFALSE;
599 }
600 }
6bae477a 601 }
25be1e5c 602
8e245d15 603 delete fAlignObjArray; fAlignObjArray=0;
a03b0371 604
6bae477a 605 return kTRUE;
606}
596a855f 607
608//_____________________________________________________________________________
609void AliReconstruction::SetGAliceFile(const char* fileName)
610{
611// set the name of the galice file
612
613 fGAliceFileName = fileName;
614}
615
efd2085e 616//_____________________________________________________________________________
b58710ef 617void AliReconstruction::SetInput(const char* input)
21a3aa09 618{
b58710ef 619 // In case the input string starts with 'mem://', we run in an online mode
620 // and AliRawReaderDateOnline object is created. In all other cases a raw-data
621 // file is assumed. One can give as an input:
622 // mem://: - events taken from DAQ monitoring libs online
623 // or
624 // mem://<filename> - emulation of the above mode (via DATE monitoring libs)
625 fInput = input;
21a3aa09 626}
627
628//_____________________________________________________________________________
efd2085e 629void AliReconstruction::SetOption(const char* detector, const char* option)
630{
631// set options for the reconstruction of a detector
632
633 TObject* obj = fOptions.FindObject(detector);
634 if (obj) fOptions.Remove(obj);
635 fOptions.Add(new TNamed(detector, option));
636}
637
596a855f 638//_____________________________________________________________________________
21a3aa09 639Bool_t AliReconstruction::Run(const char* input)
596a855f 640{
21a3aa09 641 // Run Run Run
642 AliCodeTimerAuto("");
596a855f 643
21a3aa09 644 if (!InitRun(input)) return kFALSE;
87932dab 645
21a3aa09 646 //******* The loop over events
647 Int_t iEvent = 0;
648 while ((iEvent < fRunLoader->GetNumberOfEvents()) ||
649 (fRawReader && fRawReader->NextEvent())) {
650 if (!RunEvent(iEvent)) return kFALSE;
651 iEvent++;
652 }
653
654 if (!FinishRun()) return kFALSE;
655
656 return kTRUE;
657}
658
659//_____________________________________________________________________________
b58710ef 660Bool_t AliReconstruction::InitRun(const char* input)
21a3aa09 661{
662 // Initialize all the stuff before
663 // going into the event loop
664 // If the second argument is given, the first one is ignored and
665 // the reconstruction works in an online mode
666 AliCodeTimerAuto("");
667
b58710ef 668 // Overwrite the previous setting
21a3aa09 669 if (input) fInput = input;
670
671 // set the input in case of raw data
b58710ef 672 fRawReader = AliRawReader::Create(fInput.Data());
673 if (!fRawReader)
21a3aa09 674 AliInfo("Reconstruction will run over digits");
e0027792 675
35042093 676 if (!fEquipIdMap.IsNull() && fRawReader)
677 fRawReader->LoadEquipmentIdsMap(fEquipIdMap);
678
cd0b062e 679 if (!fUseHLTData.IsNull()) {
680 // create the RawReaderHLT which performs redirection of HLT input data for
681 // the specified detectors
682 AliRawReader* pRawReader=AliRawHLTManager::CreateRawReaderHLT(fRawReader, fUseHLTData.Data());
683 if (pRawReader) {
684 fParentRawReader=fRawReader;
685 fRawReader=pRawReader;
686 } else {
687 AliError(Form("can not create Raw Reader for HLT input %s", fUseHLTData.Data()));
688 }
689 }
690
0f88822a 691 AliSysInfo::AddStamp("Start");
f08fc9f5 692 // get the run loader
693 if (!InitRunLoader()) return kFALSE;
0f88822a 694 AliSysInfo::AddStamp("LoadLoader");
596a855f 695
ec92bee0 696 // Initialize the CDB storage
795e4a22 697 InitCDB();
698
699 AliSysInfo::AddStamp("LoadCDB");
ec92bee0 700
6bae477a 701 // Set run number in CDBManager (if it is not already set by the user)
795e4a22 702 if (!SetRunNumberFromData()) if (fStopOnError) return kFALSE;
703
704 // Set CDB lock: from now on it is forbidden to reset the run number
705 // or the default storage or to activate any further storage!
706 SetCDBLock();
707
6bae477a 708 // Import ideal TGeo geometry and apply misalignment
709 if (!gGeoManager) {
710 TString geom(gSystem->DirName(fGAliceFileName));
711 geom += "/geometry.root";
98e303d9 712 AliGeomManager::LoadGeometry(geom.Data());
6bae477a 713 if (!gGeoManager) if (fStopOnError) return kFALSE;
714 }
8e245d15 715
6bae477a 716 if (!MisalignGeometry(fLoadAlignData)) if (fStopOnError) return kFALSE;
0f88822a 717 AliSysInfo::AddStamp("LoadGeom");
6bae477a 718
b37ee1e8 719
aa3c69a9 720 /*
596a855f 721 // local reconstruction
59697224 722 if (!fRunLocalReconstruction.IsNull()) {
723 if (!RunLocalReconstruction(fRunLocalReconstruction)) {
e583c30d 724 if (fStopOnError) {CleanUp(); return kFALSE;}
596a855f 725 }
726 }
aa3c69a9 727 */
2257f27e 728
729 // get vertexer
730 if (fRunVertexFinder && !CreateVertexer()) {
731 if (fStopOnError) {
732 CleanUp();
733 return kFALSE;
734 }
735 }
0f88822a 736 AliSysInfo::AddStamp("Vertexer");
596a855f 737
f08fc9f5 738 // get trackers
b8cd5251 739 if (!fRunTracking.IsNull() && !CreateTrackers(fRunTracking)) {
24f7a148 740 if (fStopOnError) {
741 CleanUp();
742 return kFALSE;
743 }
596a855f 744 }
0f88822a 745 AliSysInfo::AddStamp("LoadTrackers");
24f7a148 746
b26c3770 747 // get the possibly already existing ESD file and tree
21a3aa09 748 fesd = new AliESDEvent(); fhltesd = new AliESDEvent();
b26c3770 749 if (!gSystem->AccessPathName("AliESDs.root")){
750 gSystem->CopyFile("AliESDs.root", "AliESDs.old.root", kTRUE);
21a3aa09 751 ffileOld = TFile::Open("AliESDs.old.root");
752 if (ffileOld && ffileOld->IsOpen()) {
753 ftreeOld = (TTree*) ffileOld->Get("esdTree");
754 if (ftreeOld)fesd->ReadFromTree(ftreeOld);
755 fhlttreeOld = (TTree*) ffileOld->Get("HLTesdTree");
756 if (fhlttreeOld) fhltesd->ReadFromTree(fhlttreeOld);
b26c3770 757 }
758 }
759
36711aa4 760 // create the ESD output file and tree
21a3aa09 761 ffile = TFile::Open("AliESDs.root", "RECREATE");
762 ffile->SetCompressionLevel(2);
763 if (!ffile->IsOpen()) {
815c2b38 764 AliError("opening AliESDs.root failed");
21a3aa09 765 if (fStopOnError) {CleanUp(ffile, ffileOld); return kFALSE;}
596a855f 766 }
46698ae4 767
21a3aa09 768 ftree = new TTree("esdTree", "Tree with ESD objects");
769 fesd = new AliESDEvent();
770 fesd->CreateStdContent();
771 fesd->WriteToTree(ftree);
46698ae4 772
21a3aa09 773 fhlttree = new TTree("HLTesdTree", "Tree with HLT ESD objects");
774 fhltesd = new AliESDEvent();
775 fhltesd->CreateStdContent();
776 fhltesd->WriteToTree(fhlttree);
46698ae4 777
778 /* CKB Why?
1f46a9ae 779 delete esd; delete hltesd;
780 esd = NULL; hltesd = NULL;
46698ae4 781 */
500d54ab 782 // create the branch with ESD additions
5728d3d5 783
784
785
1d99986f 786 if (fWriteESDfriend) {
21a3aa09 787 fesdf = new AliESDfriend();
788 TBranch *br=ftree->Branch("ESDfriend.","AliESDfriend", &fesdf);
46698ae4 789 br->SetFile("AliESDfriends.root");
21a3aa09 790 fesd->AddObject(fesdf);
1d99986f 791 }
5728d3d5 792
46698ae4 793
444753c6 794 // Get the GRP CDB entry
795 AliCDBEntry* entryGRP = AliCDBManager::Instance()->Get("GRP/GRP/Data");
796
797 if(entryGRP) {
798 fGRPList = dynamic_cast<TList*> (entryGRP->GetObject());
799 } else {
800 AliError("No GRP entry found in OCDB!");
801 }
802
17c86e90 803 // Get the diamond profile from OCDB
804 AliCDBEntry* entry = AliCDBManager::Instance()
805 ->Get("GRP/Calib/MeanVertex");
806
807 if(entry) {
808 fDiamondProfile = dynamic_cast<AliESDVertex*> (entry->GetObject());
809 } else {
810 AliError("No diamond profile found in OCDB!");
811 }
812
43c9dae1 813 entry = 0;
814 entry = AliCDBManager::Instance()
815 ->Get("GRP/Calib/MeanVertexTPC");
816
817 if(entry) {
818 fDiamondProfileTPC = dynamic_cast<AliESDVertex*> (entry->GetObject());
819 } else {
820 AliError("No diamond profile found in OCDB!");
821 }
822
21a3aa09 823 ftVertexer = new AliVertexerTracks(AliTracker::GetBz());
824 if(fDiamondProfile && fMeanVertexConstraint) ftVertexer->SetVtxStart(fDiamondProfile);
c5e3e5d1 825
b649205a 826 if (fRawReader) fRawReader->RewindEvents();
a5fa6165 827
95cee32f 828 ProcInfo_t ProcInfo;
829 gSystem->GetProcInfo(&ProcInfo);
830 AliInfo(Form("Current memory usage %d %d", ProcInfo.fMemResident, ProcInfo.fMemVirtual));
8661738e 831
aa3c69a9 832
833 //Initialize the QA and start of cycle for out-of-cycle QA
b37ee1e8 834 //QA
835 AliQADataMakerSteer qas ;
836 if (fRunQA && fRawReader) {
837 qas.SetEventRange(fFirstEvent, fLastEvent) ;
838 qas.Run(fRunLocalReconstruction, fRawReader) ;
839 fSameQACycle = kTRUE ;
840 }
841 // checking the QA of previous steps
842 //CheckQA() ;
2473ca62 843
b37ee1e8 844 if (fRunQA) {
2473ca62 845 // TString detStr(fFillESD);
846// for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
847// if (!IsSelected(fgkDetectorName[iDet], detStr)) continue;
848// AliQADataMakerRec *qadm = GetQADataMaker(iDet);
849// if (!qadm) continue;
850// AliInfo(Form("Initializing the QA data maker for %s",
851// fgkDetectorName[iDet]));
852//
853// qadm->Init(AliQA::kRECPOINTS, AliCDBManager::Instance()->GetRun());
854// qadm->Init(AliQA::kESDS, AliCDBManager::Instance()->GetRun());
855// if (!fInLoopQA) {
856// qadm->StartOfCycle(AliQA::kRECPOINTS, fSameQACycle);
857// qadm->StartOfCycle(AliQA::kESDS,"same");
858// }
859// }
e4a998ed 860 if (fRunGlobalQA) {
861 AliQADataMakerRec *qadm = GetQADataMaker(AliQA::kGLOBAL);
862 AliInfo(Form("Initializing the global QA data maker"));
863 TObjArray *arr=
864 qadm->Init(AliQA::kRECPOINTS, AliCDBManager::Instance()->GetRun());
865 AliTracker::SetResidualsArray(arr);
866 qadm->Init(AliQA::kESDS, AliCDBManager::Instance()->GetRun());
867 if (!fInLoopQA) {
868 qadm->StartOfCycle(AliQA::kRECPOINTS, fSameQACycle);
869 qadm->StartOfCycle(AliQA::kESDS, "same");
870 }
871 }
872 if (!fInLoopQA)
873 fSameQACycle = kTRUE;
aa3c69a9 874 }
875
7167ae53 876 //Initialize the Plane Efficiency framework
877 if (fRunPlaneEff && !InitPlaneEff()) {
21a3aa09 878 if(fStopOnError) {CleanUp(ffile, ffileOld); return kFALSE;}
7167ae53 879 }
aa3c69a9 880
21a3aa09 881 return kTRUE;
882}
883
884//_____________________________________________________________________________
885Bool_t AliReconstruction::RunEvent(Int_t iEvent)
886{
887 // run the reconstruction over a single event
888 // The event loop is steered in Run method
889
890 AliCodeTimerAuto("");
891
892 if (iEvent >= fRunLoader->GetNumberOfEvents()) {
893 fRunLoader->SetEventNumber(iEvent);
894 fRunLoader->GetHeader()->Reset(fRawReader->GetRunNumber(),
895 iEvent, iEvent);
896 //?? fRunLoader->MakeTree("H");
897 fRunLoader->TreeE()->Fill();
898 }
899
900 if ((iEvent < fFirstEvent) || ((fLastEvent >= 0) && (iEvent > fLastEvent))) {
901 // copy old ESD to the new one
902 if (ftreeOld) {
903 fesd->ReadFromTree(ftreeOld);
904 ftreeOld->GetEntry(iEvent);
905 ftree->Fill();
b26c3770 906 }
21a3aa09 907 if (fhlttreeOld) {
908 fesd->ReadFromTree(fhlttreeOld);
909 fhlttreeOld->GetEntry(iEvent);
910 fhlttree->Fill();
911 }
912 return kTRUE;
913 }
914
915 AliInfo(Form("processing event %d", iEvent));
aa3c69a9 916
917 //Start of cycle for the in-loop QA
3b378a42 918 if (fInLoopQA) {
919 if (fRunQA) {
920 TString detStr(fFillESD);
921 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
e4a998ed 922 if (!IsSelected(fgkDetectorName[iDet], detStr))
923 continue;
3b378a42 924 AliQADataMakerRec *qadm = GetQADataMaker(iDet);
e4a998ed 925 if (!qadm)
926 continue;
927 qadm->StartOfCycle(AliQA::kRECPOINTS, fSameQACycle);
3b378a42 928 qadm->StartOfCycle(AliQA::kESDS, "same") ;
929 }
e4a998ed 930 if (fRunGlobalQA) {
931 AliQADataMakerRec *qadm = GetQADataMaker(AliQA::kGLOBAL);
932 qadm->StartOfCycle(AliQA::kRECPOINTS, fSameQACycle);
933 qadm->StartOfCycle(AliQA::kESDS, "same");
934 }
935 }
aa3c69a9 936 }
937
596a855f 938 fRunLoader->GetEvent(iEvent);
24f7a148 939
bb0901a4 940 char aFileName[256];
941 sprintf(aFileName, "ESD_%d.%d_final.root",
f08fc9f5 942 fRunLoader->GetHeader()->GetRun(),
943 fRunLoader->GetHeader()->GetEventNrInRun());
21a3aa09 944 if (!gSystem->AccessPathName(aFileName)) return kTRUE;
24f7a148 945
aa3c69a9 946 // local signle event reconstruction
b26c3770 947 if (!fRunLocalReconstruction.IsNull()) {
a441bf51 948 TString detectors="HLT";
949 // run HLT event reconstruction first
950 if (IsSelected(detectors, fRunLocalReconstruction) &&
951 !RunLocalEventReconstruction(detectors)) {
952 if (fStopOnError) {CleanUp(ffile, ffileOld); return kFALSE;}
953 }
954 detectors=fRunLocalReconstruction;
955 detectors.ReplaceAll("HLT", "");
956 if (!RunLocalEventReconstruction(detectors)) {
21a3aa09 957 if (fStopOnError) {CleanUp(ffile, ffileOld); return kFALSE;}
b26c3770 958 }
959 }
960
21a3aa09 961 fesd->SetRunNumber(fRunLoader->GetHeader()->GetRun());
962 fhltesd->SetRunNumber(fRunLoader->GetHeader()->GetRun());
963 fesd->SetEventNumberInFile(fRunLoader->GetHeader()->GetEventNrInRun());
964 fhltesd->SetEventNumberInFile(fRunLoader->GetHeader()->GetEventNrInRun());
46698ae4 965
d6ee376f 966 // Set magnetic field from the tracker
21a3aa09 967 fesd->SetMagneticField(AliTracker::GetBz());
968 fhltesd->SetMagneticField(AliTracker::GetBz());
596a855f 969
46698ae4 970
971
2e3550da 972 // Fill raw-data error log into the ESD
21a3aa09 973 if (fRawReader) FillRawDataErrorLog(iEvent,fesd);
2e3550da 974
2257f27e 975 // vertex finder
976 if (fRunVertexFinder) {
21a3aa09 977 if (!ReadESD(fesd, "vertex")) {
978 if (!RunVertexFinder(fesd)) {
979 if (fStopOnError) {CleanUp(ffile, ffileOld); return kFALSE;}
2257f27e 980 }
21a3aa09 981 if (fCheckPointLevel > 0) WriteESD(fesd, "vertex");
2257f27e 982 }
983 }
984
1f46a9ae 985 // HLT tracking
986 if (!fRunTracking.IsNull()) {
987 if (fRunHLTTracking) {
21a3aa09 988 fhltesd->SetPrimaryVertexSPD(fesd->GetVertex());
989 if (!RunHLTTracking(fhltesd)) {
990 if (fStopOnError) {CleanUp(ffile, ffileOld); return kFALSE;}
1f46a9ae 991 }
992 }
993 }
994
e66fbafb 995 // Muon tracking
b8cd5251 996 if (!fRunTracking.IsNull()) {
e66fbafb 997 if (fRunMuonTracking) {
21a3aa09 998 if (!RunMuonTracking(fesd)) {
999 if (fStopOnError) {CleanUp(ffile, ffileOld); return kFALSE;}
24f7a148 1000 }
596a855f 1001 }
1002 }
1003
e66fbafb 1004 // barrel tracking
1005 if (!fRunTracking.IsNull()) {
21a3aa09 1006 if (!ReadESD(fesd, "tracking")) {
1007 if (!RunTracking(fesd)) {
1008 if (fStopOnError) {CleanUp(ffile, ffileOld); return kFALSE;}
e66fbafb 1009 }
21a3aa09 1010 if (fCheckPointLevel > 0) WriteESD(fesd, "tracking");
e66fbafb 1011 }
1012 }
21c573b7 1013
596a855f 1014 // fill ESD
1015 if (!fFillESD.IsNull()) {
21a3aa09 1016 if (!FillESD(fesd, fFillESD)) {
1017 if (fStopOnError) {CleanUp(ffile, ffileOld); return kFALSE;}
596a855f 1018 }
1019 }
a5fa6165 1020
001397cd 1021 // fill Event header information from the RawEventHeader
21a3aa09 1022 if (fRawReader){FillRawEventHeaderESD(fesd);}
596a855f 1023
1024 // combined PID
21a3aa09 1025 AliESDpid::MakePID(fesd);
1026 if (fCheckPointLevel > 1) WriteESD(fesd, "PID");
596a855f 1027
b647652d 1028 if (fFillTriggerESD) {
21a3aa09 1029 if (!ReadESD(fesd, "trigger")) {
1030 if (!FillTriggerESD(fesd)) {
1031 if (fStopOnError) {CleanUp(ffile, ffileOld); return kFALSE;}
b647652d 1032 }
21a3aa09 1033 if (fCheckPointLevel > 1) WriteESD(fesd, "trigger");
b647652d 1034 }
1035 }
1036
21a3aa09 1037 ffile->cd();
a6ee503a 1038
3c3709c4 1039 //
1040 // Propagate track to the beam pipe (if not laready done by ITS)
1041 //
21a3aa09 1042 const Int_t ntracks = fesd->GetNumberOfTracks();
1043 const Double_t kBz = fesd->GetMagneticField();
3c3709c4 1044 const Double_t kRadius = 2.8; //something less than the beam pipe radius
1045
1046 TObjArray trkArray;
1047 UShort_t *selectedIdx=new UShort_t[ntracks];
1048
1049 for (Int_t itrack=0; itrack<ntracks; itrack++){
1050 const Double_t kMaxStep = 5; //max step over the material
1051 Bool_t ok;
1052
21a3aa09 1053 AliESDtrack *track = fesd->GetTrack(itrack);
3c3709c4 1054 if (!track) continue;
1055
1056 AliExternalTrackParam *tpcTrack =
1057 (AliExternalTrackParam *)track->GetTPCInnerParam();
bcabd6af 1058 ok = kFALSE;
1059 if (tpcTrack)
1060 ok = AliTracker::
1061 PropagateTrackTo(tpcTrack,kRadius,track->GetMass(),kMaxStep,kTRUE);
43c9dae1 1062
1063
1064
3c3709c4 1065 if (ok) {
1066 Int_t n=trkArray.GetEntriesFast();
1067 selectedIdx[n]=track->GetID();
1068 trkArray.AddLast(tpcTrack);
1069 }
1070
3c3709c4 1071
71860c8e 1072 //Tracks refitted by ITS should already be at the SPD vertex
1073 if (track->IsOn(AliESDtrack::kITSrefit)) continue;
1074
1075
1076 AliTracker::
3c3709c4 1077 PropagateTrackTo(track,kRadius,track->GetMass(),kMaxStep,kTRUE);
71860c8e 1078 track->RelateToVertex(fesd->GetPrimaryVertexSPD(), kBz, kVeryBig);
1079
3c3709c4 1080 }
1081
1082 //
1083 // Improve the reconstructed primary vertex position using the tracks
1084 //
1085 TObject *obj = fOptions.FindObject("ITS");
c060d7fe 1086 if (obj) {
1087 TString optITS = obj->GetTitle();
1088 if (optITS.Contains("cosmics") || optITS.Contains("COSMICS"))
a84e2607 1089 fRunVertexFinderTracks=kFALSE;
c060d7fe 1090 }
3c3709c4 1091 if (fRunVertexFinderTracks) {
1092 // TPC + ITS primary vertex
21a3aa09 1093 ftVertexer->SetITSrefitRequired();
43c9dae1 1094 if(fDiamondProfile && fMeanVertexConstraint) {
21a3aa09 1095 ftVertexer->SetVtxStart(fDiamondProfile);
43c9dae1 1096 } else {
21a3aa09 1097 ftVertexer->SetConstraintOff();
43c9dae1 1098 }
21a3aa09 1099 AliESDVertex *pvtx=ftVertexer->FindPrimaryVertex(fesd);
3c3709c4 1100 if (pvtx) {
1101 if (pvtx->GetStatus()) {
21a3aa09 1102 fesd->SetPrimaryVertex(pvtx);
3c3709c4 1103 for (Int_t i=0; i<ntracks; i++) {
21a3aa09 1104 AliESDtrack *t = fesd->GetTrack(i);
71860c8e 1105 t->RelateToVertex(pvtx, kBz, kVeryBig);
3c3709c4 1106 }
1107 }
1108 }
1109
1110 // TPC-only primary vertex
21a3aa09 1111 ftVertexer->SetITSrefitNotRequired();
43c9dae1 1112 if(fDiamondProfileTPC && fMeanVertexConstraint) {
21a3aa09 1113 ftVertexer->SetVtxStart(fDiamondProfileTPC);
43c9dae1 1114 } else {
21a3aa09 1115 ftVertexer->SetConstraintOff();
43c9dae1 1116 }
21a3aa09 1117 pvtx=ftVertexer->FindPrimaryVertex(&trkArray,selectedIdx);
3c3709c4 1118 if (pvtx) {
1119 if (pvtx->GetStatus()) {
21a3aa09 1120 fesd->SetPrimaryVertexTPC(pvtx);
3c3709c4 1121 Int_t nsel=trkArray.GetEntriesFast();
1122 for (Int_t i=0; i<nsel; i++) {
1123 AliExternalTrackParam *t =
1124 (AliExternalTrackParam *)trkArray.UncheckedAt(i);
1125 t->PropagateToDCA(pvtx, kBz, kRadius);
1126 }
1127 }
1128 }
1129
1130 }
1131 delete[] selectedIdx;
1132
21a3aa09 1133 if(fDiamondProfile) fesd->SetDiamond(fDiamondProfile);
17c86e90 1134
c5e3e5d1 1135
d1683eef 1136 if (fRunV0Finder) {
1137 // V0 finding
1138 AliV0vertexer vtxer;
21a3aa09 1139 vtxer.Tracks2V0vertices(fesd);
5e4ff34d 1140
d1683eef 1141 if (fRunCascadeFinder) {
1142 // Cascade finding
1143 AliCascadeVertexer cvtxer;
21a3aa09 1144 cvtxer.V0sTracks2CascadeVertices(fesd);
d1683eef 1145 }
5e4ff34d 1146 }
1147
596a855f 1148 // write ESD
21a3aa09 1149 if (fCleanESD) CleanESD(fesd);
854c6476 1150
79740dfc 1151 if (fRunQA) {
1152 if (fRunGlobalQA) {
1153 AliQADataMakerRec *qadm = GetQADataMaker(AliQA::kGLOBAL);
1154 if (qadm) qadm->Exec(AliQA::kESDS, fesd);
1155 }
1156 }
854c6476 1157
1d99986f 1158 if (fWriteESDfriend) {
21a3aa09 1159 fesdf->~AliESDfriend();
1160 new (fesdf) AliESDfriend(); // Reset...
1161 fesd->GetESDfriend(fesdf);
1d99986f 1162 }
21a3aa09 1163 ftree->Fill();
500d54ab 1164
1165 // write HLT ESD
21a3aa09 1166 fhlttree->Fill();
1d99986f 1167
21a3aa09 1168 if (fCheckPointLevel > 0) WriteESD(fesd, "final");
1169 fesd->Reset();
1170 fhltesd->Reset();
5728d3d5 1171 if (fWriteESDfriend) {
21a3aa09 1172 fesdf->~AliESDfriend();
1173 new (fesdf) AliESDfriend(); // Reset...
5728d3d5 1174 }
a5fa6165 1175
21a3aa09 1176 ProcInfo_t ProcInfo;
95cee32f 1177 gSystem->GetProcInfo(&ProcInfo);
1178 AliInfo(Form("Event %d -> Current memory usage %d %d",iEvent, ProcInfo.fMemResident, ProcInfo.fMemVirtual));
a5fa6165 1179
7e963665 1180
aa3c69a9 1181 // End of cycle for the in-loop QA
3b378a42 1182 if (fInLoopQA) {
1183 if (fRunQA) {
21a3aa09 1184 RunQA(fFillESD.Data(), fesd);
3b378a42 1185 TString detStr(fFillESD);
1186 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
7c002d48 1187 if (!IsSelected(fgkDetectorName[iDet], detStr))
1188 continue;
1189 AliQADataMakerRec * qadm = GetQADataMaker(iDet);
1190 if (!qadm)
1191 continue;
1192 qadm->EndOfCycle(AliQA::kRECPOINTS);
1193 qadm->EndOfCycle(AliQA::kESDS);
1194 qadm->Finish();
1195 }
aa3c69a9 1196 }
1197 if (fRunGlobalQA) {
7c002d48 1198 AliQADataMakerRec *qadm = GetQADataMaker(AliQA::kGLOBAL);
aa3c69a9 1199 if (qadm) {
1200 qadm->EndOfCycle(AliQA::kRECPOINTS);
d7259b2e 1201 qadm->EndOfCycle(AliQA::kESDS);
aa3c69a9 1202 qadm->Finish();
1203 }
1204 }
1205 }
aa3c69a9 1206
21a3aa09 1207 return kTRUE;
1208}
1209
1210//_____________________________________________________________________________
21a3aa09 1211Bool_t AliReconstruction::FinishRun()
1212{
1213 // Finalize the run
1214 // Called after the exit
1215 // from the event loop
1216 AliCodeTimerAuto("");
1217
1218 if (fIsNewRunLoader) { // galice.root didn't exist
1219 fRunLoader->WriteHeader("OVERWRITE");
1220 fRunLoader->CdGAFile();
1221 fRunLoader->Write(0, TObject::kOverwrite);
1222 }
1223
1224 ftree->GetUserInfo()->Add(fesd);
1225 fhlttree->GetUserInfo()->Add(fhltesd);
f747912b 1226
1227 const TMap *cdbMap = AliCDBManager::Instance()->GetStorageMap();
1228 const TList *cdbList = AliCDBManager::Instance()->GetRetrievedIds();
1229
1230 TMap *cdbMapCopy = new TMap(cdbMap->GetEntries());
1231 cdbMapCopy->SetOwner(1);
1232 cdbMapCopy->SetName("cdbMap");
1233 TIter iter(cdbMap->GetTable());
1234
1235 TPair* pair = 0;
1236 while((pair = dynamic_cast<TPair*> (iter.Next()))){
1237 TObjString* keyStr = dynamic_cast<TObjString*> (pair->Key());
1238 TObjString* valStr = dynamic_cast<TObjString*> (pair->Value());
1239 cdbMapCopy->Add(new TObjString(keyStr->GetName()), new TObjString(valStr->GetName()));
1240 }
1241
1242 TList *cdbListCopy = new TList();
1243 cdbListCopy->SetOwner(1);
1244 cdbListCopy->SetName("cdbList");
1245
1246 TIter iter2(cdbList);
1247
1248 AliCDBId* id=0;
1249 while((id = dynamic_cast<AliCDBId*> (iter2.Next()))){
a4970db9 1250 cdbListCopy->Add(new TObjString(id->ToString().Data()));
f747912b 1251 }
1252
21a3aa09 1253 ftree->GetUserInfo()->Add(cdbMapCopy);
1254 ftree->GetUserInfo()->Add(cdbListCopy);
abe0c04e 1255
46698ae4 1256
1257 if(fESDPar.Contains("ESD.par")){
1258 AliInfo("Attaching ESD.par to Tree");
1259 TNamed *fn = CopyFileToTNamed(fESDPar.Data(),"ESD.par");
21a3aa09 1260 ftree->GetUserInfo()->Add(fn);
596a855f 1261 }
1262
46698ae4 1263
21a3aa09 1264 ffile->cd();
aa3c69a9 1265
a9c0e6db 1266 if (fWriteESDfriend)
21a3aa09 1267 ftree->SetBranchStatus("ESDfriend*",0);
562dd0b4 1268 // we want to have only one tree version number
21a3aa09 1269 ftree->Write(ftree->GetName(),TObject::kOverwrite);
1270 fhlttree->Write();
f3a97c86 1271
a7a1e1c7 1272// Finish with Plane Efficiency evaluation: before of CleanUp !!!
1273 if (fRunPlaneEff && !FinishPlaneEff()) {
1274 AliWarning("Finish PlaneEff evaluation failed");
1275 }
1276
eae191bc 1277 gROOT->cd();
21a3aa09 1278 CleanUp(ffile, ffileOld);
eae191bc 1279
a7807689 1280 if (fWriteAOD) {
7a3b2050 1281 AliWarning("AOD creation not supported anymore during reconstruction. See ANALYSIS/AliAnalysisTaskESDfilter.cxx instead.");
a7807689 1282 }
1283
f3a97c86 1284 // Create tags for the events in the ESD tree (the ESD tree is always present)
1285 // In case of empty events the tags will contain dummy values
08e1a23e 1286 AliESDTagCreator *esdtagCreator = new AliESDTagCreator();
444753c6 1287 esdtagCreator->CreateESDTags(fFirstEvent,fLastEvent,fGRPList);
a1069ee1 1288 if (fWriteAOD) {
7a3b2050 1289 AliWarning("AOD tag creation not supported anymore during reconstruction.");
a1069ee1 1290 }
596a855f 1291
aa3c69a9 1292 //Finish QA and end of cycle for out-of-loop QA
3b378a42 1293 if (!fInLoopQA) {
79740dfc 1294 if (fRunQA) {
1295 AliQADataMakerSteer qas;
e30aef00 1296 qas.SetEventRange(fFirstEvent, fLastEvent) ;
79740dfc 1297 qas.Run(fRunLocalReconstruction.Data(), AliQA::kRECPOINTS, fSameQACycle);
1298 //qas.Reset() ;
2473ca62 1299 qas.Run(fRunLocalReconstruction.Data(), AliQA::kESDS, fSameQACycle);
79740dfc 1300 if (fRunGlobalQA) {
1301 AliQADataMakerRec *qadm = GetQADataMaker(AliQA::kGLOBAL);
1302 if (qadm) {
1303 qadm->EndOfCycle(AliQA::kRECPOINTS);
1304 qadm->EndOfCycle(AliQA::kESDS);
1305 qadm->Finish();
1306 }
1307 }
1308 }
759c1df1 1309 }
795e4a22 1310
1311 // Cleanup of CDB manager: cache and active storages!
1312 AliCDBManager::Instance()->ClearCache();
1313
596a855f 1314 return kTRUE;
1315}
1316
1317
1318//_____________________________________________________________________________
c4aa7a4c 1319Bool_t AliReconstruction::RunLocalReconstruction(const TString& /*detectors*/)
596a855f 1320{
59697224 1321// run the local reconstruction
0f88822a 1322 static Int_t eventNr=0;
87932dab 1323 AliCodeTimerAuto("")
030b532d 1324
d76c31f4 1325 // AliCDBManager* man = AliCDBManager::Instance();
1326// Bool_t origCache = man->GetCacheFlag();
8e245d15 1327
d76c31f4 1328// TString detStr = detectors;
1329// for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
1330// if (!IsSelected(fgkDetectorName[iDet], detStr)) continue;
1331// AliReconstructor* reconstructor = GetReconstructor(iDet);
1332// if (!reconstructor) continue;
1333// if (reconstructor->HasLocalReconstruction()) continue;
b8cd5251 1334
d76c31f4 1335// AliCodeTimerStart(Form("running reconstruction for %s", fgkDetectorName[iDet]));
1336// AliInfo(Form("running reconstruction for %s", fgkDetectorName[iDet]));
87932dab 1337
d76c31f4 1338// AliCodeTimerStart(Form("Loading calibration data from OCDB for %s", fgkDetectorName[iDet]));
1339// AliInfo(Form("Loading calibration data from OCDB for %s", fgkDetectorName[iDet]));
8e245d15 1340
d76c31f4 1341// man->SetCacheFlag(kTRUE);
1342// TString calibPath = Form("%s/Calib/*", fgkDetectorName[iDet]);
1343// man->GetAll(calibPath); // entries are cached!
8e245d15 1344
d76c31f4 1345// AliCodeTimerStop(Form("Loading calibration data from OCDB for %s", fgkDetectorName[iDet]));
87932dab 1346
d76c31f4 1347// if (fRawReader) {
1348// fRawReader->RewindEvents();
1349// reconstructor->Reconstruct(fRunLoader, fRawReader);
1350// } else {
1351// reconstructor->Reconstruct(fRunLoader);
1352// }
87932dab 1353
d76c31f4 1354// AliCodeTimerStop(Form("running reconstruction for %s", fgkDetectorName[iDet]));
0f88822a 1355 // AliSysInfo::AddStamp(Form("LRec%s_%d",fgkDetectorName[iDet],eventNr));
8e245d15 1356
d76c31f4 1357// // unload calibration data
1358// man->UnloadFromCache(calibPath);
1359// //man->ClearCache();
1360// }
596a855f 1361
d76c31f4 1362// man->SetCacheFlag(origCache);
8e245d15 1363
d76c31f4 1364// if ((detStr.CompareTo("ALL") != 0) && !detStr.IsNull()) {
1365// AliError(Form("the following detectors were not found: %s",
1366// detStr.Data()));
1367// if (fStopOnError) return kFALSE;
1368// }
596a855f 1369
0f88822a 1370 eventNr++;
596a855f 1371 return kTRUE;
1372}
1373
1374//_____________________________________________________________________________
b26c3770 1375Bool_t AliReconstruction::RunLocalEventReconstruction(const TString& detectors)
1376{
1377// run the local reconstruction
aa3c69a9 1378
0f88822a 1379 static Int_t eventNr=0;
87932dab 1380 AliCodeTimerAuto("")
b26c3770 1381
1382 TString detStr = detectors;
1383 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
1384 if (!IsSelected(fgkDetectorName[iDet], detStr)) continue;
1385 AliReconstructor* reconstructor = GetReconstructor(iDet);
1386 if (!reconstructor) continue;
1387 AliLoader* loader = fLoader[iDet];
d76c31f4 1388 if (!loader) {
1389 AliWarning(Form("No loader is defined for %s!",fgkDetectorName[iDet]));
1390 continue;
1391 }
b26c3770 1392 // conversion of digits
1393 if (fRawReader && reconstructor->HasDigitConversion()) {
1394 AliInfo(Form("converting raw data digits into root objects for %s",
1395 fgkDetectorName[iDet]));
87932dab 1396 AliCodeTimerAuto(Form("converting raw data digits into root objects for %s",
1397 fgkDetectorName[iDet]));
b26c3770 1398 loader->LoadDigits("update");
1399 loader->CleanDigits();
1400 loader->MakeDigitsContainer();
1401 TTree* digitsTree = loader->TreeD();
1402 reconstructor->ConvertDigits(fRawReader, digitsTree);
1403 loader->WriteDigits("OVERWRITE");
1404 loader->UnloadDigits();
b26c3770 1405 }
b26c3770 1406 // local reconstruction
b26c3770 1407 AliInfo(Form("running reconstruction for %s", fgkDetectorName[iDet]));
87932dab 1408 AliCodeTimerAuto(Form("running reconstruction for %s", fgkDetectorName[iDet]));
b26c3770 1409 loader->LoadRecPoints("update");
1410 loader->CleanRecPoints();
1411 loader->MakeRecPointsContainer();
1412 TTree* clustersTree = loader->TreeR();
1413 if (fRawReader && !reconstructor->HasDigitConversion()) {
1414 reconstructor->Reconstruct(fRawReader, clustersTree);
1415 } else {
1416 loader->LoadDigits("read");
1417 TTree* digitsTree = loader->TreeD();
1418 if (!digitsTree) {
1419 AliError(Form("Can't get the %s digits tree", fgkDetectorName[iDet]));
1420 if (fStopOnError) return kFALSE;
1421 } else {
1422 reconstructor->Reconstruct(digitsTree, clustersTree);
1423 }
1424 loader->UnloadDigits();
1425 }
d76c31f4 1426
aa3c69a9 1427 // In-loop QA for local reconstrucion
1428 if (fRunQA && fInLoopQA) {
04236e67 1429 AliQADataMakerRec * qadm = GetQADataMaker(iDet);
aa3c69a9 1430 if (qadm) {
1431 //AliCodeTimerStart
1432 //(Form("Running QA data maker for %s", fgkDetectorName[iDet]));
1433 //AliInfo
1434 //(Form("Running QA data maker for %s", fgkDetectorName[iDet]));
1435
1436 qadm->Exec(AliQA::kRECPOINTS, clustersTree) ;
1437
1438 //AliCodeTimerStop
1439 //(Form("Running QA data maker for %s", fgkDetectorName[iDet]));
1440 }
1441 }
d76c31f4 1442
aa3c69a9 1443 loader->WriteRecPoints("OVERWRITE");
b26c3770 1444 loader->UnloadRecPoints();
6efecea1 1445 AliSysInfo::AddStamp(Form("LRec%s_%d",fgkDetectorName[iDet],eventNr), iDet,1,eventNr);
b26c3770 1446 }
1447
1448 if ((detStr.CompareTo("ALL") != 0) && !detStr.IsNull()) {
1449 AliError(Form("the following detectors were not found: %s",
1450 detStr.Data()));
1451 if (fStopOnError) return kFALSE;
1452 }
0f88822a 1453 eventNr++;
b26c3770 1454 return kTRUE;
1455}
1456
1457//_____________________________________________________________________________
af885e0f 1458Bool_t AliReconstruction::RunVertexFinder(AliESDEvent*& esd)
596a855f 1459{
1460// run the barrel tracking
1461
87932dab 1462 AliCodeTimerAuto("")
030b532d 1463
2257f27e 1464 AliESDVertex* vertex = NULL;
1465 Double_t vtxPos[3] = {0, 0, 0};
1466 Double_t vtxErr[3] = {0.07, 0.07, 0.1};
1467 TArrayF mcVertex(3);
a6b0b91b 1468 if (fRunLoader->GetHeader() && fRunLoader->GetHeader()->GenEventHeader()) {
1469 fRunLoader->GetHeader()->GenEventHeader()->PrimaryVertex(mcVertex);
1470 for (Int_t i = 0; i < 3; i++) vtxPos[i] = mcVertex[i];
1471 }
2257f27e 1472
b8cd5251 1473 if (fVertexer) {
17c86e90 1474 if(fDiamondProfile) fVertexer->SetVtxStart(fDiamondProfile);
815c2b38 1475 AliInfo("running the ITS vertex finder");
b26c3770 1476 if (fLoader[0]) fLoader[0]->LoadRecPoints();
b8cd5251 1477 vertex = fVertexer->FindVertexForCurrentEvent(fRunLoader->GetEventNumber());
b26c3770 1478 if (fLoader[0]) fLoader[0]->UnloadRecPoints();
2257f27e 1479 if(!vertex){
815c2b38 1480 AliWarning("Vertex not found");
c710f220 1481 vertex = new AliESDVertex();
d1a50cb5 1482 vertex->SetName("default");
2257f27e 1483 }
1484 else {
d1a50cb5 1485 vertex->SetName("reconstructed");
2257f27e 1486 }
1487
1488 } else {
815c2b38 1489 AliInfo("getting the primary vertex from MC");
2257f27e 1490 vertex = new AliESDVertex(vtxPos, vtxErr);
1491 }
1492
1493 if (vertex) {
1494 vertex->GetXYZ(vtxPos);
1495 vertex->GetSigmaXYZ(vtxErr);
1496 } else {
815c2b38 1497 AliWarning("no vertex reconstructed");
2257f27e 1498 vertex = new AliESDVertex(vtxPos, vtxErr);
1499 }
06cc9d95 1500 esd->SetPrimaryVertexSPD(vertex);
32e449be 1501 // if SPD multiplicity has been determined, it is stored in the ESD
25be1e5c 1502 AliMultiplicity *mult = fVertexer->GetMultiplicity();
32e449be 1503 if(mult)esd->SetMultiplicity(mult);
1504
b8cd5251 1505 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
1506 if (fTracker[iDet]) fTracker[iDet]->SetVertex(vtxPos, vtxErr);
1507 }
2257f27e 1508 delete vertex;
1509
2257f27e 1510 return kTRUE;
1511}
1512
1513//_____________________________________________________________________________
af885e0f 1514Bool_t AliReconstruction::RunHLTTracking(AliESDEvent*& esd)
1f46a9ae 1515{
1516// run the HLT barrel tracking
1517
87932dab 1518 AliCodeTimerAuto("")
1f46a9ae 1519
1520 if (!fRunLoader) {
1521 AliError("Missing runLoader!");
1522 return kFALSE;
1523 }
1524
1525 AliInfo("running HLT tracking");
1526
1527 // Get a pointer to the HLT reconstructor
1528 AliReconstructor *reconstructor = GetReconstructor(fgkNDetectors-1);
1529 if (!reconstructor) return kFALSE;
1530
1531 // TPC + ITS
1532 for (Int_t iDet = 1; iDet >= 0; iDet--) {
1533 TString detName = fgkDetectorName[iDet];
1534 AliDebug(1, Form("%s HLT tracking", detName.Data()));
1535 reconstructor->SetOption(detName.Data());
d76c31f4 1536 AliTracker *tracker = reconstructor->CreateTracker();
1f46a9ae 1537 if (!tracker) {
1538 AliWarning(Form("couldn't create a HLT tracker for %s", detName.Data()));
1539 if (fStopOnError) return kFALSE;
9dcc06e1 1540 continue;
1f46a9ae 1541 }
1542 Double_t vtxPos[3];
1543 Double_t vtxErr[3]={0.005,0.005,0.010};
1544 const AliESDVertex *vertex = esd->GetVertex();
1545 vertex->GetXYZ(vtxPos);
1546 tracker->SetVertex(vtxPos,vtxErr);
1547 if(iDet != 1) {
1548 fLoader[iDet]->LoadRecPoints("read");
1549 TTree* tree = fLoader[iDet]->TreeR();
1550 if (!tree) {
1551 AliError(Form("Can't get the %s cluster tree", detName.Data()));
1552 return kFALSE;
1553 }
1554 tracker->LoadClusters(tree);
1555 }
1556 if (tracker->Clusters2Tracks(esd) != 0) {
1557 AliError(Form("HLT %s Clusters2Tracks failed", fgkDetectorName[iDet]));
1558 return kFALSE;
1559 }
1560 if(iDet != 1) {
1561 tracker->UnloadClusters();
1562 }
1563 delete tracker;
1564 }
1565
1f46a9ae 1566 return kTRUE;
1567}
1568
1569//_____________________________________________________________________________
af885e0f 1570Bool_t AliReconstruction::RunMuonTracking(AliESDEvent*& esd)
e66fbafb 1571{
1572// run the muon spectrometer tracking
1573
87932dab 1574 AliCodeTimerAuto("")
e66fbafb 1575
1576 if (!fRunLoader) {
1577 AliError("Missing runLoader!");
1578 return kFALSE;
1579 }
1580 Int_t iDet = 7; // for MUON
1581
1582 AliInfo("is running...");
1583
1584 // Get a pointer to the MUON reconstructor
1585 AliReconstructor *reconstructor = GetReconstructor(iDet);
1586 if (!reconstructor) return kFALSE;
1587
1588
1589 TString detName = fgkDetectorName[iDet];
1590 AliDebug(1, Form("%s tracking", detName.Data()));
d76c31f4 1591 AliTracker *tracker = reconstructor->CreateTracker();
e66fbafb 1592 if (!tracker) {
1593 AliWarning(Form("couldn't create a tracker for %s", detName.Data()));
1594 return kFALSE;
1595 }
1596
e66fbafb 1597 // read RecPoints
761350a6 1598 fLoader[iDet]->LoadRecPoints("read");
c1954ee5 1599
761350a6 1600 tracker->LoadClusters(fLoader[iDet]->TreeR());
1601
1602 Int_t rv = tracker->Clusters2Tracks(esd);
1603
761350a6 1604 if ( rv )
1605 {
e66fbafb 1606 AliError(Form("%s Clusters2Tracks failed", fgkDetectorName[iDet]));
1607 return kFALSE;
1608 }
761350a6 1609
e66fbafb 1610 fLoader[iDet]->UnloadRecPoints();
1611
c1954ee5 1612 tracker->UnloadClusters();
1613
e66fbafb 1614 delete tracker;
1615
e66fbafb 1616 return kTRUE;
1617}
1618
1619
1620//_____________________________________________________________________________
af885e0f 1621Bool_t AliReconstruction::RunTracking(AliESDEvent*& esd)
2257f27e 1622{
1623// run the barrel tracking
0f88822a 1624 static Int_t eventNr=0;
87932dab 1625 AliCodeTimerAuto("")
24f7a148 1626
815c2b38 1627 AliInfo("running tracking");
596a855f 1628
91b876d1 1629 //Fill the ESD with the T0 info (will be used by the TOF)
d76c31f4 1630 if (fReconstructor[11] && fLoader[11]) {
1631 fLoader[11]->LoadRecPoints("READ");
1632 TTree *treeR = fLoader[11]->TreeR();
1633 GetReconstructor(11)->FillESD((TTree *)NULL,treeR,esd);
1634 }
91b876d1 1635
b8cd5251 1636 // pass 1: TPC + ITS inwards
1637 for (Int_t iDet = 1; iDet >= 0; iDet--) {
1638 if (!fTracker[iDet]) continue;
1639 AliDebug(1, Form("%s tracking", fgkDetectorName[iDet]));
24f7a148 1640
b8cd5251 1641 // load clusters
1642 fLoader[iDet]->LoadRecPoints("read");
6efecea1 1643 AliSysInfo::AddStamp(Form("RLoadCluster%s_%d",fgkDetectorName[iDet],eventNr),iDet,1, eventNr);
b8cd5251 1644 TTree* tree = fLoader[iDet]->TreeR();
1645 if (!tree) {
1646 AliError(Form("Can't get the %s cluster tree", fgkDetectorName[iDet]));
24f7a148 1647 return kFALSE;
1648 }
b8cd5251 1649 fTracker[iDet]->LoadClusters(tree);
6efecea1 1650 AliSysInfo::AddStamp(Form("TLoadCluster%s_%d",fgkDetectorName[iDet],eventNr), iDet,2, eventNr);
b8cd5251 1651 // run tracking
1652 if (fTracker[iDet]->Clusters2Tracks(esd) != 0) {
1653 AliError(Form("%s Clusters2Tracks failed", fgkDetectorName[iDet]));
24f7a148 1654 return kFALSE;
1655 }
b8cd5251 1656 if (fCheckPointLevel > 1) {
1657 WriteESD(esd, Form("%s.tracking", fgkDetectorName[iDet]));
1658 }
878e1fe1 1659 // preliminary PID in TPC needed by the ITS tracker
1660 if (iDet == 1) {
b26c3770 1661 GetReconstructor(1)->FillESD((TTree*)NULL, (TTree*)NULL, esd);
878e1fe1 1662 AliESDpid::MakePID(esd);
0f88822a 1663 }
6efecea1 1664 AliSysInfo::AddStamp(Form("Tracking0%s_%d",fgkDetectorName[iDet],eventNr), iDet,3,eventNr);
b8cd5251 1665 }
596a855f 1666
b8cd5251 1667 // pass 2: ALL backwards
aa3c69a9 1668
b8cd5251 1669 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
1670 if (!fTracker[iDet]) continue;
1671 AliDebug(1, Form("%s back propagation", fgkDetectorName[iDet]));
1672
1673 // load clusters
1674 if (iDet > 1) { // all except ITS, TPC
1675 TTree* tree = NULL;
7b61cd9c 1676 fLoader[iDet]->LoadRecPoints("read");
6efecea1 1677 AliSysInfo::AddStamp(Form("RLoadCluster0%s_%d",fgkDetectorName[iDet],eventNr), iDet,1, eventNr);
7b61cd9c 1678 tree = fLoader[iDet]->TreeR();
b8cd5251 1679 if (!tree) {
1680 AliError(Form("Can't get the %s cluster tree", fgkDetectorName[iDet]));
24f7a148 1681 return kFALSE;
1682 }
0f88822a 1683 fTracker[iDet]->LoadClusters(tree);
6efecea1 1684 AliSysInfo::AddStamp(Form("TLoadCluster0%s_%d",fgkDetectorName[iDet],eventNr), iDet,2, eventNr);
b8cd5251 1685 }
24f7a148 1686
b8cd5251 1687 // run tracking
283f39c6 1688 if (iDet>1) // start filling residuals for the "outer" detectors
1689 if (fRunGlobalQA) AliTracker::SetFillResiduals(kTRUE);
1690
b8cd5251 1691 if (fTracker[iDet]->PropagateBack(esd) != 0) {
1692 AliError(Form("%s backward propagation failed", fgkDetectorName[iDet]));
49dfd67a 1693 // return kFALSE;
b8cd5251 1694 }
1695 if (fCheckPointLevel > 1) {
1696 WriteESD(esd, Form("%s.back", fgkDetectorName[iDet]));
1697 }
24f7a148 1698
b8cd5251 1699 // unload clusters
1700 if (iDet > 2) { // all except ITS, TPC, TRD
1701 fTracker[iDet]->UnloadClusters();
7b61cd9c 1702 fLoader[iDet]->UnloadRecPoints();
b8cd5251 1703 }
8f37df88 1704 // updated PID in TPC needed by the ITS tracker -MI
1705 if (iDet == 1) {
8f37df88 1706 GetReconstructor(1)->FillESD((TTree*)NULL, (TTree*)NULL, esd);
1707 AliESDpid::MakePID(esd);
1708 }
6efecea1 1709 AliSysInfo::AddStamp(Form("Tracking1%s_%d",fgkDetectorName[iDet],eventNr), iDet,3, eventNr);
b8cd5251 1710 }
283f39c6 1711 //stop filling residuals for the "outer" detectors
1712 if (fRunGlobalQA) AliTracker::SetFillResiduals(kFALSE);
596a855f 1713
98937d93 1714 // write space-points to the ESD in case alignment data output
1715 // is switched on
1716 if (fWriteAlignmentData)
1717 WriteAlignmentData(esd);
1718
b8cd5251 1719 // pass 3: TRD + TPC + ITS refit inwards
aa3c69a9 1720
b8cd5251 1721 for (Int_t iDet = 2; iDet >= 0; iDet--) {
1722 if (!fTracker[iDet]) continue;
1723 AliDebug(1, Form("%s inward refit", fgkDetectorName[iDet]));
596a855f 1724
b8cd5251 1725 // run tracking
283f39c6 1726 if (iDet<2) // start filling residuals for TPC and ITS
1727 if (fRunGlobalQA) AliTracker::SetFillResiduals(kTRUE);
1728
b8cd5251 1729 if (fTracker[iDet]->RefitInward(esd) != 0) {
1730 AliError(Form("%s inward refit failed", fgkDetectorName[iDet]));
49dfd67a 1731 // return kFALSE;
b8cd5251 1732 }
db2368d0 1733 // run postprocessing
1734 if (fTracker[iDet]->PostProcess(esd) != 0) {
1735 AliError(Form("%s postprocessing failed", fgkDetectorName[iDet]));
1736 // return kFALSE;
1737 }
b8cd5251 1738 if (fCheckPointLevel > 1) {
1739 WriteESD(esd, Form("%s.refit", fgkDetectorName[iDet]));
1740 }
6efecea1 1741 AliSysInfo::AddStamp(Form("Tracking2%s_%d",fgkDetectorName[iDet],eventNr), iDet,3, eventNr);
b8cd5251 1742 // unload clusters
1743 fTracker[iDet]->UnloadClusters();
6efecea1 1744 AliSysInfo::AddStamp(Form("TUnloadCluster%s_%d",fgkDetectorName[iDet],eventNr), iDet,4, eventNr);
b8cd5251 1745 fLoader[iDet]->UnloadRecPoints();
6efecea1 1746 AliSysInfo::AddStamp(Form("RUnloadCluster%s_%d",fgkDetectorName[iDet],eventNr), iDet,5, eventNr);
b8cd5251 1747 }
283f39c6 1748 // stop filling residuals for TPC and ITS
3b378a42 1749 if (fRunGlobalQA) AliTracker::SetFillResiduals(kFALSE);
854c6476 1750
0f88822a 1751 eventNr++;
596a855f 1752 return kTRUE;
1753}
1754
1755//_____________________________________________________________________________
d64bd07d 1756Bool_t AliReconstruction::CleanESD(AliESDEvent *esd){
1757 //
1758 // Remove the data which are not needed for the physics analysis.
1759 //
1760
d64bd07d 1761 Int_t nTracks=esd->GetNumberOfTracks();
18571674 1762 Int_t nV0s=esd->GetNumberOfV0s();
cf37fd88 1763 AliInfo
1764 (Form("Number of ESD tracks and V0s before cleaning: %d %d",nTracks,nV0s));
d64bd07d 1765
18571674 1766 Float_t cleanPars[]={fV0DCAmax,fV0CsPmin,fDmax,fZmax};
7f68891d 1767 Bool_t rc=esd->Clean(cleanPars);
d64bd07d 1768
7f68891d 1769 nTracks=esd->GetNumberOfTracks();
18571674 1770 nV0s=esd->GetNumberOfV0s();
cf37fd88 1771 AliInfo
ae5d5566 1772 (Form("Number of ESD tracks and V0s after cleaning %d %d",nTracks,nV0s));
d64bd07d 1773
7f68891d 1774 return rc;
d64bd07d 1775}
1776
1777//_____________________________________________________________________________
af885e0f 1778Bool_t AliReconstruction::FillESD(AliESDEvent*& esd, const TString& detectors)
596a855f 1779{
1780// fill the event summary data
1781
87932dab 1782 AliCodeTimerAuto("")
0f88822a 1783 static Int_t eventNr=0;
596a855f 1784 TString detStr = detectors;
abe0c04e 1785
b8cd5251 1786 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
abe0c04e 1787 if (!IsSelected(fgkDetectorName[iDet], detStr)) continue;
b8cd5251 1788 AliReconstructor* reconstructor = GetReconstructor(iDet);
1789 if (!reconstructor) continue;
b8cd5251 1790 if (!ReadESD(esd, fgkDetectorName[iDet])) {
1791 AliDebug(1, Form("filling ESD for %s", fgkDetectorName[iDet]));
b26c3770 1792 TTree* clustersTree = NULL;
d76c31f4 1793 if (fLoader[iDet]) {
b26c3770 1794 fLoader[iDet]->LoadRecPoints("read");
1795 clustersTree = fLoader[iDet]->TreeR();
1796 if (!clustersTree) {
1797 AliError(Form("Can't get the %s clusters tree",
1798 fgkDetectorName[iDet]));
1799 if (fStopOnError) return kFALSE;
1800 }
1801 }
1802 if (fRawReader && !reconstructor->HasDigitConversion()) {
1803 reconstructor->FillESD(fRawReader, clustersTree, esd);
1804 } else {
1805 TTree* digitsTree = NULL;
1806 if (fLoader[iDet]) {
1807 fLoader[iDet]->LoadDigits("read");
1808 digitsTree = fLoader[iDet]->TreeD();
1809 if (!digitsTree) {
1810 AliError(Form("Can't get the %s digits tree",
1811 fgkDetectorName[iDet]));
1812 if (fStopOnError) return kFALSE;
1813 }
1814 }
1815 reconstructor->FillESD(digitsTree, clustersTree, esd);
1816 if (fLoader[iDet]) fLoader[iDet]->UnloadDigits();
1817 }
d76c31f4 1818 if (fLoader[iDet]) {
b26c3770 1819 fLoader[iDet]->UnloadRecPoints();
1820 }
1821
b8cd5251 1822 if (fCheckPointLevel > 2) WriteESD(esd, fgkDetectorName[iDet]);
596a855f 1823 }
1824 }
1825
1826 if ((detStr.CompareTo("ALL") != 0) && !detStr.IsNull()) {
815c2b38 1827 AliError(Form("the following detectors were not found: %s",
1828 detStr.Data()));
596a855f 1829 if (fStopOnError) return kFALSE;
1830 }
6efecea1 1831 AliSysInfo::AddStamp(Form("FillESD%d",eventNr), 0,1, eventNr);
0f88822a 1832 eventNr++;
596a855f 1833 return kTRUE;
1834}
1835
b647652d 1836//_____________________________________________________________________________
af885e0f 1837Bool_t AliReconstruction::FillTriggerESD(AliESDEvent*& esd)
b647652d 1838{
1839 // Reads the trigger decision which is
1840 // stored in Trigger.root file and fills
1841 // the corresponding esd entries
1842
87932dab 1843 AliCodeTimerAuto("")
1844
b647652d 1845 AliInfo("Filling trigger information into the ESD");
1846
b024fd7f 1847 AliCentralTrigger *aCTP = NULL;
1848
b647652d 1849 if (fRawReader) {
1850 AliCTPRawStream input(fRawReader);
1851 if (!input.Next()) {
1852 AliError("No valid CTP (trigger) DDL raw data is found ! The trigger information is not stored in the ESD !");
1853 return kFALSE;
1854 }
1855 esd->SetTriggerMask(input.GetClassMask());
1856 esd->SetTriggerCluster(input.GetClusterMask());
b024fd7f 1857
1858 aCTP = new AliCentralTrigger();
1859 TString configstr("");
1860 if (!aCTP->LoadConfiguration(configstr)) { // Load CTP config from OCDB
1861 AliError("No trigger configuration found in OCDB! The trigger classes information will no be stored in ESD!");
259e35c9 1862 delete aCTP;
b024fd7f 1863 return kFALSE;
1864 }
b647652d 1865 }
1866 else {
1867 AliRunLoader *runloader = AliRunLoader::GetRunLoader();
1868 if (runloader) {
1869 if (!runloader->LoadTrigger()) {
1ea86aa2 1870 aCTP = runloader->GetTrigger();
b647652d 1871 esd->SetTriggerMask(aCTP->GetClassMask());
1872 esd->SetTriggerCluster(aCTP->GetClusterMask());
1873 }
1874 else {
1875 AliWarning("No trigger can be loaded! The trigger information is not stored in the ESD !");
1876 return kFALSE;
1877 }
1878 }
1879 else {
1880 AliError("No run loader is available! The trigger information is not stored in the ESD !");
1881 return kFALSE;
1882 }
1883 }
1884
b024fd7f 1885 // Now fill the trigger class names into AliESDRun object
1886 AliTriggerConfiguration *config = aCTP->GetConfiguration();
1887 if (!config) {
1888 AliError("No trigger configuration has been found! The trigger classes information will no be stored in ESD!");
d74294be 1889 if (fRawReader) delete aCTP;
b024fd7f 1890 return kFALSE;
1891 }
1892
1893 const TObjArray& classesArray = config->GetClasses();
1894 Int_t nclasses = classesArray.GetEntriesFast();
1895 for( Int_t j=0; j<nclasses; j++ ) {
1896 AliTriggerClass* trclass = (AliTriggerClass*)classesArray.At( j );
1897 Int_t trindex = (Int_t)TMath::Log2(trclass->GetMask());
1898 esd->SetTriggerClass(trclass->GetName(),trindex);
1899 }
1900
d74294be 1901 if (fRawReader) delete aCTP;
b647652d 1902 return kTRUE;
1903}
596a855f 1904
001397cd 1905
1906
1907
1908
1909//_____________________________________________________________________________
af885e0f 1910Bool_t AliReconstruction::FillRawEventHeaderESD(AliESDEvent*& esd)
001397cd 1911{
1912 //
1913 // Filling information from RawReader Header
1914 //
1915
1916 AliInfo("Filling information from RawReader Header");
31fd97b2 1917 esd->SetBunchCrossNumber(0);
1918 esd->SetOrbitNumber(0);
9bcc1e45 1919 esd->SetPeriodNumber(0);
001397cd 1920 esd->SetTimeStamp(0);
1921 esd->SetEventType(0);
1922 const AliRawEventHeaderBase * eventHeader = fRawReader->GetEventHeader();
1923 if (eventHeader){
9bcc1e45 1924
1925 const UInt_t *id = eventHeader->GetP("Id");
1926 esd->SetBunchCrossNumber((id)[1]&0x00000fff);
1927 esd->SetOrbitNumber((((id)[0]<<20)&0xf00000)|(((id)[1]>>12)&0xfffff));
1928 esd->SetPeriodNumber(((id)[0]>>4)&0x0fffffff);
1929
001397cd 1930 esd->SetTimeStamp((eventHeader->Get("Timestamp")));
31fd97b2 1931 esd->SetEventType((eventHeader->Get("Type")));
001397cd 1932 }
1933
1934 return kTRUE;
1935}
1936
1937
596a855f 1938//_____________________________________________________________________________
1939Bool_t AliReconstruction::IsSelected(TString detName, TString& detectors) const
1940{
1941// check whether detName is contained in detectors
1942// if yes, it is removed from detectors
1943
1944 // check if all detectors are selected
1945 if ((detectors.CompareTo("ALL") == 0) ||
1946 detectors.BeginsWith("ALL ") ||
1947 detectors.EndsWith(" ALL") ||
1948 detectors.Contains(" ALL ")) {
1949 detectors = "ALL";
1950 return kTRUE;
1951 }
1952
1953 // search for the given detector
1954 Bool_t result = kFALSE;
1955 if ((detectors.CompareTo(detName) == 0) ||
1956 detectors.BeginsWith(detName+" ") ||
1957 detectors.EndsWith(" "+detName) ||
1958 detectors.Contains(" "+detName+" ")) {
1959 detectors.ReplaceAll(detName, "");
1960 result = kTRUE;
1961 }
1962
1963 // clean up the detectors string
1964 while (detectors.Contains(" ")) detectors.ReplaceAll(" ", " ");
1965 while (detectors.BeginsWith(" ")) detectors.Remove(0, 1);
1966 while (detectors.EndsWith(" ")) detectors.Remove(detectors.Length()-1, 1);
1967
1968 return result;
1969}
e583c30d 1970
1971//_____________________________________________________________________________
f08fc9f5 1972Bool_t AliReconstruction::InitRunLoader()
1973{
1974// get or create the run loader
1975
1976 if (gAlice) delete gAlice;
1977 gAlice = NULL;
1978
b26c3770 1979 if (!gSystem->AccessPathName(fGAliceFileName.Data())) { // galice.root exists
1980 // load all base libraries to get the loader classes
1981 TString libs = gSystem->GetLibraries();
1982 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
1983 TString detName = fgkDetectorName[iDet];
1984 if (detName == "HLT") continue;
1985 if (libs.Contains("lib" + detName + "base.so")) continue;
1986 gSystem->Load("lib" + detName + "base.so");
1987 }
f08fc9f5 1988 fRunLoader = AliRunLoader::Open(fGAliceFileName.Data());
1989 if (!fRunLoader) {
1990 AliError(Form("no run loader found in file %s", fGAliceFileName.Data()));
1991 CleanUp();
1992 return kFALSE;
1993 }
b26c3770 1994 fRunLoader->CdGAFile();
1995 if (gFile->GetKey(AliRunLoader::GetGAliceName())) {
1996 if (fRunLoader->LoadgAlice() == 0) {
1997 gAlice = fRunLoader->GetAliRun();
c84a5e9e 1998 AliTracker::SetFieldMap(gAlice->Field(),fUniformField);
b26c3770 1999 }
f08fc9f5 2000 }
2001 if (!gAlice && !fRawReader) {
2002 AliError(Form("no gAlice object found in file %s",
2003 fGAliceFileName.Data()));
2004 CleanUp();
2005 return kFALSE;
2006 }
2007
6cae184e 2008 //PH This is a temporary fix to give access to the kinematics
2009 //PH that is needed for the labels of ITS clusters
f2ee4290 2010 fRunLoader->LoadHeader();
6cae184e 2011 fRunLoader->LoadKinematics();
2012
f08fc9f5 2013 } else { // galice.root does not exist
2014 if (!fRawReader) {
2015 AliError(Form("the file %s does not exist", fGAliceFileName.Data()));
2016 CleanUp();
2017 return kFALSE;
2018 }
2019 fRunLoader = AliRunLoader::Open(fGAliceFileName.Data(),
2020 AliConfig::GetDefaultEventFolderName(),
2021 "recreate");
2022 if (!fRunLoader) {
2023 AliError(Form("could not create run loader in file %s",
2024 fGAliceFileName.Data()));
2025 CleanUp();
2026 return kFALSE;
2027 }
21a3aa09 2028 fIsNewRunLoader = kTRUE;
f08fc9f5 2029 fRunLoader->MakeTree("E");
21a3aa09 2030
973388c2 2031 if (fNumberOfEventsPerFile > 0)
2032 fRunLoader->SetNumberOfEventsPerFile(fNumberOfEventsPerFile);
2033 else
21a3aa09 2034 fRunLoader->SetNumberOfEventsPerFile((UInt_t)-1);
f08fc9f5 2035 }
2036
2037 return kTRUE;
2038}
2039
2040//_____________________________________________________________________________
b8cd5251 2041AliReconstructor* AliReconstruction::GetReconstructor(Int_t iDet)
c757bafd 2042{
f08fc9f5 2043// get the reconstructor object and the loader for a detector
c757bafd 2044
b8cd5251 2045 if (fReconstructor[iDet]) return fReconstructor[iDet];
2046
2047 // load the reconstructor object
2048 TPluginManager* pluginManager = gROOT->GetPluginManager();
2049 TString detName = fgkDetectorName[iDet];
2050 TString recName = "Ali" + detName + "Reconstructor";
f08fc9f5 2051 if (gAlice && !gAlice->GetDetector(detName) && (detName != "HLT")) return NULL;
b8cd5251 2052
b8cd5251 2053 AliReconstructor* reconstructor = NULL;
2054 // first check if a plugin is defined for the reconstructor
2055 TPluginHandler* pluginHandler =
2056 pluginManager->FindHandler("AliReconstructor", detName);
f08fc9f5 2057 // if not, add a plugin for it
2058 if (!pluginHandler) {
b8cd5251 2059 AliDebug(1, Form("defining plugin for %s", recName.Data()));
b26c3770 2060 TString libs = gSystem->GetLibraries();
2061 if (libs.Contains("lib" + detName + "base.so") ||
2062 (gSystem->Load("lib" + detName + "base.so") >= 0)) {
b8cd5251 2063 pluginManager->AddHandler("AliReconstructor", detName,
2064 recName, detName + "rec", recName + "()");
2065 } else {
2066 pluginManager->AddHandler("AliReconstructor", detName,
2067 recName, detName, recName + "()");
c757bafd 2068 }
b8cd5251 2069 pluginHandler = pluginManager->FindHandler("AliReconstructor", detName);
2070 }
2071 if (pluginHandler && (pluginHandler->LoadPlugin() == 0)) {
2072 reconstructor = (AliReconstructor*) pluginHandler->ExecPlugin(0);
c757bafd 2073 }
b8cd5251 2074 if (reconstructor) {
2075 TObject* obj = fOptions.FindObject(detName.Data());
2076 if (obj) reconstructor->SetOption(obj->GetTitle());
d76c31f4 2077 reconstructor->Init();
b8cd5251 2078 fReconstructor[iDet] = reconstructor;
2079 }
2080
f08fc9f5 2081 // get or create the loader
2082 if (detName != "HLT") {
2083 fLoader[iDet] = fRunLoader->GetLoader(detName + "Loader");
2084 if (!fLoader[iDet]) {
2085 AliConfig::Instance()
2086 ->CreateDetectorFolders(fRunLoader->GetEventFolder(),
2087 detName, detName);
2088 // first check if a plugin is defined for the loader
bb0901a4 2089 pluginHandler =
f08fc9f5 2090 pluginManager->FindHandler("AliLoader", detName);
2091 // if not, add a plugin for it
2092 if (!pluginHandler) {
2093 TString loaderName = "Ali" + detName + "Loader";
2094 AliDebug(1, Form("defining plugin for %s", loaderName.Data()));
2095 pluginManager->AddHandler("AliLoader", detName,
2096 loaderName, detName + "base",
2097 loaderName + "(const char*, TFolder*)");
2098 pluginHandler = pluginManager->FindHandler("AliLoader", detName);
2099 }
2100 if (pluginHandler && (pluginHandler->LoadPlugin() == 0)) {
2101 fLoader[iDet] =
2102 (AliLoader*) pluginHandler->ExecPlugin(2, detName.Data(),
2103 fRunLoader->GetEventFolder());
2104 }
2105 if (!fLoader[iDet]) { // use default loader
2106 fLoader[iDet] = new AliLoader(detName, fRunLoader->GetEventFolder());
2107 }
2108 if (!fLoader[iDet]) {
2109 AliWarning(Form("couldn't get loader for %s", detName.Data()));
6667b602 2110 if (fStopOnError) return NULL;
f08fc9f5 2111 } else {
2112 fRunLoader->AddLoader(fLoader[iDet]);
2113 fRunLoader->CdGAFile();
2114 if (gFile && !gFile->IsWritable()) gFile->ReOpen("UPDATE");
2115 fRunLoader->Write(0, TObject::kOverwrite);
2116 }
2117 }
2118 }
2119
b8cd5251 2120 return reconstructor;
c757bafd 2121}
2122
2123//_____________________________________________________________________________
2257f27e 2124Bool_t AliReconstruction::CreateVertexer()
2125{
2126// create the vertexer
2127
b8cd5251 2128 fVertexer = NULL;
2129 AliReconstructor* itsReconstructor = GetReconstructor(0);
59697224 2130 if (itsReconstructor) {
d76c31f4 2131 fVertexer = itsReconstructor->CreateVertexer();
2257f27e 2132 }
b8cd5251 2133 if (!fVertexer) {
815c2b38 2134 AliWarning("couldn't create a vertexer for ITS");
2257f27e 2135 if (fStopOnError) return kFALSE;
2136 }
2137
2138 return kTRUE;
2139}
2140
2141//_____________________________________________________________________________
b8cd5251 2142Bool_t AliReconstruction::CreateTrackers(const TString& detectors)
24f7a148 2143{
f08fc9f5 2144// create the trackers
24f7a148 2145
b8cd5251 2146 TString detStr = detectors;
2147 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
2148 if (!IsSelected(fgkDetectorName[iDet], detStr)) continue;
2149 AliReconstructor* reconstructor = GetReconstructor(iDet);
2150 if (!reconstructor) continue;
2151 TString detName = fgkDetectorName[iDet];
1f46a9ae 2152 if (detName == "HLT") {
2153 fRunHLTTracking = kTRUE;
2154 continue;
2155 }
e66fbafb 2156 if (detName == "MUON") {
2157 fRunMuonTracking = kTRUE;
2158 continue;
2159 }
2160
f08fc9f5 2161
d76c31f4 2162 fTracker[iDet] = reconstructor->CreateTracker();
f08fc9f5 2163 if (!fTracker[iDet] && (iDet < 7)) {
2164 AliWarning(Form("couldn't create a tracker for %s", detName.Data()));
8250d5f5 2165 if (fStopOnError) return kFALSE;
2166 }
6efecea1 2167 AliSysInfo::AddStamp(Form("LTracker%s",fgkDetectorName[iDet]), iDet,0);
8250d5f5 2168 }
2169
24f7a148 2170 return kTRUE;
2171}
2172
2173//_____________________________________________________________________________
b26c3770 2174void AliReconstruction::CleanUp(TFile* file, TFile* fileOld)
e583c30d 2175{
2176// delete trackers and the run loader and close and delete the file
2177
b8cd5251 2178 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
2179 delete fReconstructor[iDet];
2180 fReconstructor[iDet] = NULL;
2181 fLoader[iDet] = NULL;
2182 delete fTracker[iDet];
2183 fTracker[iDet] = NULL;
c65c502a 2184// delete fQADataMaker[iDet];
2185// fQADataMaker[iDet] = NULL;
b8cd5251 2186 }
2187 delete fVertexer;
2188 fVertexer = NULL;
21a3aa09 2189
2190 if (ftVertexer) delete ftVertexer;
2191 ftVertexer = NULL;
795e4a22 2192
2193 if(!(AliCDBManager::Instance()->GetCacheFlag())) {
2194 delete fDiamondProfile;
2195 fDiamondProfile = NULL;
43c9dae1 2196 delete fDiamondProfileTPC;
2197 fDiamondProfileTPC = NULL;
de95c208 2198 delete fGRPList;
2199 fGRPList = NULL;
795e4a22 2200 }
e583c30d 2201
444753c6 2202
e583c30d 2203 delete fRunLoader;
2204 fRunLoader = NULL;
b649205a 2205 delete fRawReader;
2206 fRawReader = NULL;
cd0b062e 2207 if (fParentRawReader) delete fParentRawReader;
2208 fParentRawReader=NULL;
e583c30d 2209
2210 if (file) {
2211 file->Close();
2212 delete file;
2213 }
b26c3770 2214
2215 if (fileOld) {
2216 fileOld->Close();
2217 delete fileOld;
2218 gSystem->Unlink("AliESDs.old.root");
2219 }
21a3aa09 2220
e583c30d 2221}
24f7a148 2222
24f7a148 2223//_____________________________________________________________________________
af885e0f 2224
2225Bool_t AliReconstruction::ReadESD(AliESDEvent*& esd, const char* recStep) const
24f7a148 2226{
2227// read the ESD event from a file
2228
2229 if (!esd) return kFALSE;
2230 char fileName[256];
2231 sprintf(fileName, "ESD_%d.%d_%s.root",
31fd97b2 2232 esd->GetRunNumber(), esd->GetEventNumberInFile(), recStep);
24f7a148 2233 if (gSystem->AccessPathName(fileName)) return kFALSE;
2234
f3a97c86 2235 AliInfo(Form("reading ESD from file %s", fileName));
815c2b38 2236 AliDebug(1, Form("reading ESD from file %s", fileName));
24f7a148 2237 TFile* file = TFile::Open(fileName);
2238 if (!file || !file->IsOpen()) {
815c2b38 2239 AliError(Form("opening %s failed", fileName));
24f7a148 2240 delete file;
2241 return kFALSE;
2242 }
2243
2244 gROOT->cd();
2245 delete esd;
af885e0f 2246 esd = (AliESDEvent*) file->Get("ESD");
24f7a148 2247 file->Close();
2248 delete file;
2249 return kTRUE;
af885e0f 2250
24f7a148 2251}
2252
af885e0f 2253
2254
24f7a148 2255//_____________________________________________________________________________
af885e0f 2256void AliReconstruction::WriteESD(AliESDEvent* esd, const char* recStep) const
24f7a148 2257{
2258// write the ESD event to a file
2259
2260 if (!esd) return;
2261 char fileName[256];
2262 sprintf(fileName, "ESD_%d.%d_%s.root",
31fd97b2 2263 esd->GetRunNumber(), esd->GetEventNumberInFile(), recStep);
24f7a148 2264
815c2b38 2265 AliDebug(1, Form("writing ESD to file %s", fileName));
24f7a148 2266 TFile* file = TFile::Open(fileName, "recreate");
2267 if (!file || !file->IsOpen()) {
815c2b38 2268 AliError(Form("opening %s failed", fileName));
24f7a148 2269 } else {
2270 esd->Write("ESD");
2271 file->Close();
2272 }
2273 delete file;
2274}
f3a97c86 2275
2276
af885e0f 2277void AliReconstruction::WriteAlignmentData(AliESDEvent* esd)
98937d93 2278{
2279 // Write space-points which are then used in the alignment procedures
2280 // For the moment only ITS, TRD and TPC
2281
2282 // Load TOF clusters
d528ee75 2283 if (fTracker[3]){
2284 fLoader[3]->LoadRecPoints("read");
2285 TTree* tree = fLoader[3]->TreeR();
2286 if (!tree) {
2287 AliError(Form("Can't get the %s cluster tree", fgkDetectorName[3]));
2288 return;
2289 }
2290 fTracker[3]->LoadClusters(tree);
98937d93 2291 }
98937d93 2292 Int_t ntracks = esd->GetNumberOfTracks();
2293 for (Int_t itrack = 0; itrack < ntracks; itrack++)
2294 {
2295 AliESDtrack *track = esd->GetTrack(itrack);
2296 Int_t nsp = 0;
ef7253ac 2297 Int_t idx[200];
98937d93 2298 for (Int_t iDet = 3; iDet >= 0; iDet--)
2299 nsp += track->GetNcls(iDet);
2300 if (nsp) {
2301 AliTrackPointArray *sp = new AliTrackPointArray(nsp);
2302 track->SetTrackPointArray(sp);
2303 Int_t isptrack = 0;
2304 for (Int_t iDet = 3; iDet >= 0; iDet--) {
2305 AliTracker *tracker = fTracker[iDet];
2306 if (!tracker) continue;
2307 Int_t nspdet = track->GetNcls(iDet);
98937d93 2308 if (nspdet <= 0) continue;
2309 track->GetClusters(iDet,idx);
2310 AliTrackPoint p;
2311 Int_t isp = 0;
2312 Int_t isp2 = 0;
4ed6fb1c 2313 while (isp2 < nspdet) {
48ce48d1 2314 Bool_t isvalid;
c12b6e44 2315 TString dets = fgkDetectorName[iDet];
2316 if ((fUseTrackingErrorsForAlignment.CompareTo(dets) == 0) ||
2317 fUseTrackingErrorsForAlignment.BeginsWith(dets+" ") ||
2318 fUseTrackingErrorsForAlignment.EndsWith(" "+dets) ||
2319 fUseTrackingErrorsForAlignment.Contains(" "+dets+" ")) {
2320 isvalid = tracker->GetTrackPointTrackingError(idx[isp2],p,track);
48ce48d1 2321 } else {
2322 isvalid = tracker->GetTrackPoint(idx[isp2],p);
2323 }
2324 isp2++;
160db090 2325 const Int_t kNTPCmax = 159;
2326 if (iDet==1 && isp2>kNTPCmax) break; // to be fixed
98937d93 2327 if (!isvalid) continue;
2328 sp->AddPoint(isptrack,&p); isptrack++; isp++;
2329 }
98937d93 2330 }
2331 }
2332 }
d528ee75 2333 if (fTracker[3]){
2334 fTracker[3]->UnloadClusters();
2335 fLoader[3]->UnloadRecPoints();
2336 }
98937d93 2337}
2e3550da 2338
2339//_____________________________________________________________________________
af885e0f 2340void AliReconstruction::FillRawDataErrorLog(Int_t iEvent, AliESDEvent* esd)
2e3550da 2341{
2342 // The method reads the raw-data error log
2343 // accumulated within the rawReader.
2344 // It extracts the raw-data errors related to
2345 // the current event and stores them into
2346 // a TClonesArray inside the esd object.
2347
2348 if (!fRawReader) return;
2349
2350 for(Int_t i = 0; i < fRawReader->GetNumberOfErrorLogs(); i++) {
2351
2352 AliRawDataErrorLog *log = fRawReader->GetErrorLog(i);
2353 if (!log) continue;
2354 if (iEvent != log->GetEventNumber()) continue;
2355
2356 esd->AddRawDataErrorLog(log);
2357 }
2358
2359}
46698ae4 2360
2361TNamed* AliReconstruction::CopyFileToTNamed(TString fPath,TString fName){
b545009a 2362 // Dump a file content into a char in TNamed
46698ae4 2363 ifstream in;
2364 in.open(fPath.Data(),ios::in | ios::binary|ios::ate);
2365 Int_t kBytes = (Int_t)in.tellg();
2366 printf("Size: %d \n",kBytes);
2367 TNamed *fn = 0;
2368 if(in.good()){
2369 char* memblock = new char [kBytes];
2370 in.seekg (0, ios::beg);
2371 in.read (memblock, kBytes);
2372 in.close();
2373 TString fData(memblock,kBytes);
2374 fn = new TNamed(fName,fData);
2375 printf("fData Size: %d \n",fData.Sizeof());
2376 printf("fName Size: %d \n",fName.Sizeof());
2377 printf("fn Size: %d \n",fn->Sizeof());
2378 delete[] memblock;
2379 }
2380 else{
2381 AliInfo(Form("Could not Open %s\n",fPath.Data()));
2382 }
2383
2384 return fn;
2385}
2386
2387void AliReconstruction::TNamedToFile(TTree* fTree, TString fName){
46698ae4 2388 // This is not really needed in AliReconstruction at the moment
2389 // but can serve as a template
2390
2391 TList *fList = fTree->GetUserInfo();
2392 TNamed *fn = (TNamed*)fList->FindObject(fName.Data());
2393 printf("fn Size: %d \n",fn->Sizeof());
2394
2395 TString fTmp(fn->GetName()); // to be 100% sure in principle fName also works
2396 const char* cdata = fn->GetTitle();
2397 printf("fTmp Size %d\n",fTmp.Sizeof());
2398
2399 int size = fn->Sizeof()-fTmp.Sizeof()-sizeof(UChar_t)-sizeof(Int_t); // see dfinition of TString::SizeOf()...
2400 printf("calculated size %d\n",size);
2401 ofstream out(fName.Data(),ios::out | ios::binary);
2402 out.write(cdata,size);
2403 out.close();
2404
2405}
6efecea1 2406
7e963665 2407//_____________________________________________________________________________
04236e67 2408AliQADataMakerRec * AliReconstruction::GetQADataMaker(Int_t iDet)
7e963665 2409{
2410 // get the quality assurance data maker object and the loader for a detector
6efecea1 2411
7e963665 2412 if (fQADataMaker[iDet])
2413 return fQADataMaker[iDet];
2414
04236e67 2415 AliQADataMakerRec * qadm = NULL;
2416 if (iDet == fgkNDetectors) { //Global QA
2417 qadm = new AliGlobalQADataMaker();
aa3c69a9 2418 fQADataMaker[iDet] = qadm;
2419 return qadm;
2420 }
2421
7e963665 2422 // load the QA data maker object
2423 TPluginManager* pluginManager = gROOT->GetPluginManager();
2424 TString detName = fgkDetectorName[iDet];
04236e67 2425 TString qadmName = "Ali" + detName + "QADataMakerRec";
7e963665 2426 if (gAlice && !gAlice->GetDetector(detName) && (detName != "HLT"))
2427 return NULL;
2428
7e963665 2429 // first check if a plugin is defined for the quality assurance data maker
04236e67 2430 TPluginHandler* pluginHandler = pluginManager->FindHandler("AliQADataMakerRec", detName);
7e963665 2431 // if not, add a plugin for it
2432 if (!pluginHandler) {
2433 AliDebug(1, Form("defining plugin for %s", qadmName.Data()));
2434 TString libs = gSystem->GetLibraries();
2435 if (libs.Contains("lib" + detName + "base.so") ||
2436 (gSystem->Load("lib" + detName + "base.so") >= 0)) {
04236e67 2437 pluginManager->AddHandler("AliQADataMakerRec", detName,
7e963665 2438 qadmName, detName + "qadm", qadmName + "()");
2439 } else {
04236e67 2440 pluginManager->AddHandler("AliQADataMakerRec", detName,
7e963665 2441 qadmName, detName, qadmName + "()");
2442 }
04236e67 2443 pluginHandler = pluginManager->FindHandler("AliQADataMakerRec", detName);
7e963665 2444 }
2445 if (pluginHandler && (pluginHandler->LoadPlugin() == 0)) {
04236e67 2446 qadm = (AliQADataMakerRec *) pluginHandler->ExecPlugin(0);
7e963665 2447 }
aa3c69a9 2448
2449 fQADataMaker[iDet] = qadm;
7e963665 2450
2451 return qadm;
2452}
46698ae4 2453
a5fa6165 2454//_____________________________________________________________________________
7e963665 2455Bool_t AliReconstruction::RunQA(const char* detectors, AliESDEvent *& esd)
2456{
2457 // run the Quality Assurance data producer
2458
2459 AliCodeTimerAuto("")
2460 TString detStr = detectors;
2461 for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
2462 if (!IsSelected(fgkDetectorName[iDet], detStr))
2463 continue;
04236e67 2464 AliQADataMakerRec * qadm = GetQADataMaker(iDet);
7e963665 2465 if (!qadm)
2466 continue;
2467 AliCodeTimerStart(Form("running quality assurance data maker for %s", fgkDetectorName[iDet]));
2468 AliInfo(Form("running quality assurance data maker for %s", fgkDetectorName[iDet]));
2469
2470 qadm->Exec(AliQA::kESDS, esd) ;
2471 qadm->Increment() ;
2472
2473 AliCodeTimerStop(Form("running quality assurance data maker for %s", fgkDetectorName[iDet]));
2474 }
2475 if ((detStr.CompareTo("ALL") != 0) && !detStr.IsNull()) {
2476 AliError(Form("the following detectors were not found: %s",
2477 detStr.Data()));
2478 if (fStopOnError)
2479 return kFALSE;
2480 }
2481
2482 return kTRUE;
2483
2484}
8661738e 2485
2486//_____________________________________________________________________________
2487void AliReconstruction::CheckQA()
2488{
2489// check the QA of SIM for this run and remove the detectors
2490// with status Fatal
2491
abe0c04e 2492 TString newRunLocalReconstruction ;
2493 TString newRunTracking ;
2494 TString newFillESD ;
2495
8661738e 2496 for (Int_t iDet = 0; iDet < AliQA::kNDET; iDet++) {
2497 TString detName(AliQA::GetDetName(iDet)) ;
96d67a8d 2498 AliQA * qa = AliQA::Instance(AliQA::DETECTORINDEX_t(iDet)) ;
2499 if ( qa->IsSet(AliQA::DETECTORINDEX_t(iDet), AliQA::kSIM, AliQA::kFATAL)) {
8661738e 2500 AliInfo(Form("QA status for %s in Hits and/or SDIGITS and/or Digits was Fatal; No reconstruction performed", detName.Data())) ;
abe0c04e 2501 } else {
2502 if ( fRunLocalReconstruction.Contains(AliQA::GetDetName(iDet)) ||
2503 fRunLocalReconstruction.Contains("ALL") ) {
2504 newRunLocalReconstruction += detName ;
2505 newRunLocalReconstruction += " " ;
2506 }
2507 if ( fRunTracking.Contains(AliQA::GetDetName(iDet)) ||
2508 fRunTracking.Contains("ALL") ) {
2509 newRunTracking += detName ;
2510 newRunTracking += " " ;
2511 }
2512 if ( fFillESD.Contains(AliQA::GetDetName(iDet)) ||
2513 fFillESD.Contains("ALL") ) {
2514 newFillESD += detName ;
2515 newFillESD += " " ;
8661738e 2516 }
2517 }
2518 }
abe0c04e 2519 fRunLocalReconstruction = newRunLocalReconstruction ;
2520 fRunTracking = newRunTracking ;
2521 fFillESD = newFillESD ;
a5fa6165 2522}
5b188f2f 2523
2524//_____________________________________________________________________________
2525Int_t AliReconstruction::GetDetIndex(const char* detector)
2526{
2527 // return the detector index corresponding to detector
2528 Int_t index = -1 ;
2529 for (index = 0; index < fgkNDetectors ; index++) {
2530 if ( strcmp(detector, fgkDetectorName[index]) == 0 )
2531 break ;
2532 }
2533 return index ;
2534}
7167ae53 2535//_____________________________________________________________________________
2536Bool_t AliReconstruction::FinishPlaneEff() {
2537 //
2538 // Here execute all the necessary operationis, at the end of the tracking phase,
2539 // in case that evaluation of PlaneEfficiencies was required for some detector.
2540 // E.g., write into a DataBase file the PlaneEfficiency which have been evaluated.
2541 //
2542 // This Preliminary version works only FOR ITS !!!!!
2543 // other detectors (TOF,TRD, etc. have to develop their specific codes)
2544 //
2545 // Input: none
2546 // Return: kTRUE if all operations have been done properly, kFALSE otherwise
2547 //
2548 Bool_t ret=kFALSE;
2549 //for (Int_t iDet = 0; iDet < fgkNDetectors; iDet++) {
2550 for (Int_t iDet = 0; iDet < 1; iDet++) { // for the time being only ITS
2551 //if (!IsSelected(fgkDetectorName[iDet], detStr)) continue;
5fbd4fd6 2552 if(fTracker[iDet]) {
2553 AliPlaneEff *planeeff=fTracker[iDet]->GetPlaneEff();
2554 ret=planeeff->WriteIntoCDB();
2555 if(planeeff->GetCreateHistos()) {
2556 TString name="PlaneEffHisto";
2557 name+=fgkDetectorName[iDet];
2558 name+=".root";
2559 ret*=planeeff->WriteHistosToFile(name,"RECREATE");
2560 }
2561 }
7167ae53 2562 }
2563 return ret;
2564}
2565//_____________________________________________________________________________
2566Bool_t AliReconstruction::InitPlaneEff() {
2567//
2568 // Here execute all the necessary operations, before of the tracking phase,
2569 // for the evaluation of PlaneEfficiencies, in case required for some detectors.
2570 // E.g., read from a DataBase file a first evaluation of the PlaneEfficiency
2571 // which should be updated/recalculated.
2572 //
2573 // This Preliminary version will work only FOR ITS !!!!!
2574 // other detectors (TOF,TRD, etc. have to develop their specific codes)
2575 //
2576 // Input: none
2577 // Return: kTRUE if all operations have been done properly, kFALSE otherwise
2578 //
2579 AliWarning(Form("Implementation of this method not yet done !! Method return kTRUE"));
2580 return kTRUE;
7520312d 2581}