[u/mrichter/AliRoot.git] / TPC / AliTPCcalibBase.cxx

/**************************************************************************
 * Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. *
 *                                                                        *
 * Author: The ALICE Off-line Project.                                    *
 * Contributors are mentioned in the code where appropriate.              *
 *                                                                        *
 * Permission to use, copy, modify and distribute this software and its   *
 * documentation strictly for non-commercial purposes is hereby granted   *
 * without fee, provided that the above copyright notice appears in all   *
 * copies and that both the copyright notice and this permission notice   *
 * appear in the supporting documentation. The authors make no claims     *
 * about the suitability of this software for any purpose. It is          *
 * provided "as is" without express or implied warranty.                  *
 **************************************************************************/


///////////////////////////////////////////////////////////////////////////////
//                                                                           //
//  Base class for the calibration components using 
//  as input TPCseeds and ESDs
//  Event loop outside of the component
//
//
// Base functionality to be implemeneted by component 
/* 
   //In some cases only one of this function to be implemented
   virtual void     Process(AliESDEvent *event)
   virtual void     Process(AliTPCseed *track)
   //
   virtual Long64_t Merge(TCollection *li);
   virtual void     Analyze()
   void             Terminate();
*/
// Functionality provided by base class for Algorith debuging:
//  TTreeSRedirector * cstream =  GetDebugStreamer() - get debug streamer which can be use for numerical debugging
//                      


//  marian.ivanov@cern.ch
// 
#include "AliTPCcalibBase.h"
#include "TSystem.h"
#include "TFile.h"
#include "TTreeStream.h"
#include "TTimeStamp.h"
#include "TGraph.h"
#include "TGraphErrors.h"
#include "TF1.h"
#include "TH1.h"
#include "THnSparse.h"
#include "TH1D.h"
#include "TH2D.h"
#include "TAxis.h"


#include "AliLog.h"
#include "AliESDEvent.h"


ClassImp(AliTPCcalibBase)

AliTPCcalibBase::AliTPCcalibBase():
    TNamed(),
    fDebugStreamer(0),
    fStreamLevel(0),   
    fRun(0),                  //!  current Run number
    fEvent(0),                //!  current Event number
    fTime(0),                 //!  current Time
    fTrigger(0),              //! current trigger type
    fMagF(0),                 //! current magnetic field
    fTriggerMaskReject(-1),   //trigger mask - reject trigger
    fTriggerMaskAccept(-1),   //trigger mask - accept trigger
    fHasLaser(kFALSE),                    //flag the laser is overlayed with given event 
    fRejectLaser(kTRUE),                 //flag- reject laser
    fTriggerClass(),
    fCurrentEvent(0),           //! current event
    fCurrentTrack(0),           //! current esd track
    fCurrentFriendTrack(0),           //! current esd track
    fCurrentSeed(0),            //! current seed
    fDebugLevel(0)
{
  //
  // Constructor
  //
}

AliTPCcalibBase::AliTPCcalibBase(const char * name, const char * title):
  TNamed(name,title),
  fDebugStreamer(0),
  fStreamLevel(0),   
  fRun(0),                  //!  current Run number
  fEvent(0),                //!  current Event number
  fTime(0),                 //!  current Time
  fTrigger(0),              //! current trigger type
  fMagF(0),                 //! current magnetic field
  fTriggerMaskReject(-1),   //trigger mask - reject trigger
  fTriggerMaskAccept(-1),   //trigger mask - accept trigger
  fHasLaser(kFALSE),                    //flag the laser is overlayed with given event 
  fRejectLaser(kTRUE),                 //flag- reject laser
  fTriggerClass(),
  fCurrentEvent(0),           //! current event
  fCurrentTrack(0),           //! current esd track
  fCurrentFriendTrack(0),           //! current esd track
  fCurrentSeed(0),            //! current seed
  fDebugLevel(0)
{
  //
  // Constructor
  //
}

AliTPCcalibBase::AliTPCcalibBase(const AliTPCcalibBase&calib):
  TNamed(calib),
  fDebugStreamer(0),
  fStreamLevel(calib.fStreamLevel),
  fRun(0),                  //!  current Run number
  fEvent(0),                //!  current Event number
  fTime(0),                 //!  current Time
  fTrigger(0),              //! current trigger type
  fMagF(0),                 //! current magnetic field
  fTriggerMaskReject(calib.fTriggerMaskReject),   //trigger mask - reject trigger
  fTriggerMaskAccept(calib.fTriggerMaskAccept),   //trigger mask - accept trigger
  fHasLaser(calib.fHasLaser),                    //flag the laser is overlayed with given event
  fRejectLaser(calib.fRejectLaser),                 //flag- reject laser
  fTriggerClass(calib.fTriggerClass),
  fCurrentEvent(0),           //! current event
  fCurrentTrack(0),           //! current esd track
  fCurrentFriendTrack(0),           //! current esd track
  fCurrentSeed(0),            //! current seed
  fDebugLevel(calib.fDebugLevel)
{
  //
  // copy constructor
  //
}

AliTPCcalibBase &AliTPCcalibBase::operator=(const AliTPCcalibBase&calib){
  //
  // operator=
  //
  ((TNamed *)this)->operator=(calib);
  fDebugStreamer=0;
  fStreamLevel=calib.fStreamLevel;
  fDebugLevel=calib.fDebugLevel;
  return *this;
}


AliTPCcalibBase::~AliTPCcalibBase() {
  //
  // destructor
  //
  if (fDebugLevel>0) printf("AliTPCcalibBase::~AliTPCcalibBase\n");
  if (fDebugStreamer) delete fDebugStreamer;
  fDebugStreamer=0;
}

void  AliTPCcalibBase::Terminate(){
  //
  //
  //
  if (fDebugLevel>0) printf("AliTPCcalibBase::Terminate\n");
  if (fDebugStreamer) delete fDebugStreamer;
  fDebugStreamer = 0;
  return;
}

TTreeSRedirector *AliTPCcalibBase::GetDebugStreamer(){
  //
  // Get Debug streamer
  // In case debug streamer not yet initialized and StreamLevel>0 create new one
  //
  if (fStreamLevel==0) return 0;
  if (fDebugStreamer) return fDebugStreamer;
  TString dsName;
  dsName=GetName();
  dsName+="Debug.root";
  dsName.ReplaceAll(" ",""); 
  fDebugStreamer = new TTreeSRedirector(dsName.Data());
  return fDebugStreamer;
}


void    AliTPCcalibBase::UpdateEventInfo(AliESDEvent * event){
  //
  //
  //
  fRun     = event->GetRunNumber();
  fEvent   = event->GetEventNumberInFile();
  fTime    = event->GetTimeStamp();
  fTrigger = event->GetTriggerMask();
  fMagF    = event->GetMagneticField();
  fTriggerClass = event->GetFiredTriggerClasses().Data();
  fHasLaser = HasLaser(event); 
  
}


Bool_t AliTPCcalibBase::HasLaser(AliESDEvent *event){
  //
  //
  //
  // Thresholds more than 8 tracks with small dip angle
  
  const Int_t kMinLaserTracks = 8;
  const Float_t kThrLaser       = 0.3;
  const Float_t kLaserTgl       = 0.01;

  Int_t ntracks = event->GetNumberOfTracks();
  if (ntracks<kMinLaserTracks) return kFALSE;
  Float_t nlaser=0;
  Float_t nall=0;
  for (Int_t i=0;i<ntracks;++i) {
    AliESDtrack *track=event->GetTrack(i);
    if (!track) continue;
    if (track->GetTPCNcls()<=0) continue; 
    nall++;
    if (TMath::Abs(track->GetTgl())<kLaserTgl) nlaser++;
  }
  if (nlaser>kMinLaserTracks) return kTRUE;
  if (nall>0 && nlaser/nall>kThrLaser) return kTRUE;
  return kFALSE;
}


Bool_t AliTPCcalibBase::AcceptTrigger(){
  //
  // Apply trigger mask - Don't do calibration for non proper triggers
  // 
  if (fTriggerMaskReject==(Int_t)fTrigger) return kFALSE;
  if (fTriggerMaskAccept>0 && fTriggerMaskAccept!=(Int_t)fTrigger) return kFALSE;
  if (fHasLaser && fRejectLaser) return kFALSE;
  return kTRUE;
}


void AliTPCcalibBase::RegisterDebugOutput(const char *path){
  //
  // store  - copy debug output to the destination position
  // currently ONLY for local copy
  if (fDebugLevel>0) printf("AliTPCcalibBase::RegisterDebugOutput(%s)\n",path);
  if (fStreamLevel==0) return;
  TString dsName;
  dsName=GetName();
  dsName+="Debug.root";
  dsName.ReplaceAll(" ",""); 
  TString dsName2=path;
  gSystem->MakeDirectory(dsName2.Data());
  dsName2+=gSystem->HostName();
  gSystem->MakeDirectory(dsName2.Data());
  dsName2+="/";
  TTimeStamp s;
  dsName2+=Int_t(s.GetNanoSec());
  dsName2+="/";
  gSystem->MakeDirectory(dsName2.Data());
  dsName2+=dsName;
  AliInfo(Form("copy %s\t%s\n",dsName.Data(),dsName2.Data()));
  printf("copy %s\t%s\n",dsName.Data(),dsName2.Data());
  TFile::Cp(dsName.Data(),dsName2.Data());
}


TGraphErrors * AliTPCcalibBase::FitSlices(THnSparse *h, Int_t axisDim1, Int_t axisDim2, Int_t minEntries, Int_t nmaxBin, Float_t fracLow, Float_t fracUp, Bool_t useMedian, TTreeSRedirector *cstream, Int_t ival){
  //
  // Fitting slices of the projection(axisDim1,axisDim2) of a sparse histogram
  // 
  TF1 funcGaus("funcGaus","gaus");
  TH2D * hist = h->Projection(axisDim1, axisDim2);
  Double_t *xvec = new Double_t[hist->GetNbinsX()];
  Double_t *yvec = new Double_t[hist->GetNbinsX()];
  Double_t *xerr = new Double_t[hist->GetNbinsX()];
  Double_t *yerr = new Double_t[hist->GetNbinsX()];
  Int_t counter  = 0;
  TH1D * projectionHist =0;
  //

  for(Int_t i=1; i <= hist->GetNbinsX(); i++) {
    Int_t nsum=0;
    Int_t imin   =  i;
    Int_t imax   =  i;

    for (Int_t idelta=0; idelta<nmaxBin; idelta++){
      //
      imin   =  TMath::Max(i-idelta,1);
      imax   =  TMath::Min(i+idelta,hist->GetNbinsX());
      nsum = TMath::Nint(hist->Integral(imin,imax,0,hist->GetNbinsY()));
      if (nsum==0) break;
      if (nsum>minEntries) break;
    }
    if (nsum<minEntries) continue;
    //
    hist->GetXaxis()->SetRange(imin,imax);
    projectionHist = hist->ProjectionY("gain",imin,imax);
    // Determine Median:
    Float_t xMin = projectionHist->GetXaxis()->GetXmin();
    Float_t xMax = projectionHist->GetXaxis()->GetXmax();
    Float_t xMedian = (xMin+xMax)*0.5;
    Float_t integral = 0;
    for(Int_t jbin=1; jbin<projectionHist->GetNbinsX()-1; jbin++) {
      integral+=projectionHist->GetBinContent(jbin);
    }
    //printf("Integral %f\t%f\n",integral, projectionHist->GetSum());
    //
    //
    Float_t currentSum=0;
    for(Int_t jbin=1; jbin<projectionHist->GetNbinsX()-1; jbin++) {
      currentSum += projectionHist->GetBinContent(jbin);
      if (currentSum<fracLow*integral) xMin = projectionHist->GetBinCenter(jbin);
      if (currentSum<fracUp*integral)  xMax = projectionHist->GetBinCenter(jbin+1);      
      if (currentSum<0.5*integral && projectionHist->GetBinContent(jbin)>0){
	xMedian = (projectionHist->GetBinCenter(jbin)*projectionHist->GetBinContent(jbin)+
		   projectionHist->GetBinCenter(jbin+1)*projectionHist->GetBinContent(jbin+1))/
	  (projectionHist->GetBinContent(jbin)+projectionHist->GetBinContent(jbin+1));
      }
    }
    //
    Float_t rms  = projectionHist->GetRMS();
    //    i += interval;
    //
    Double_t xcenter =  hist->GetMean(); 
    Double_t xrms    =  hist->GetRMS()+hist->GetXaxis()->GetBinWidth(1)/TMath::Sqrt(12.); 
    Double_t binWidth = projectionHist->GetXaxis()->GetBinWidth(1);
    if (rms>0){
      // cut on +- 4 RMS
      projectionHist->Fit(&funcGaus,"QN","",xMin, xMax);
      Double_t chi2 = funcGaus.GetChisquare();
      //  
      xvec[counter] = xcenter;
      yvec[counter] = funcGaus.GetParameter(ival);
      xerr[counter] = xrms;
      yerr[counter] = funcGaus.GetParError(ival); 
      if (useMedian) yvec[counter] = xMedian;
      if (cstream){
	(*cstream)<<"fitDebug"<<
	  "xcenter="<<xcenter<<
	  "xMin="<<xMin<<
	  "xMax="<<xMax<<
	  "xMedian="<<xMedian<<
	  "xFitM"<<yvec[counter]<<
	  "xFitS"<<yerr[counter]<<
	  "chi2="<<chi2<<	  
	  "\n";
      }
      counter++;
    }else{
      xvec[counter] = xcenter;
      yvec[counter] = xMedian;
      xerr[counter] = xrms;
      yerr[counter] = binWidth/TMath::Sqrt(12.); 
      counter++;
    }
    delete projectionHist;
  }
  
  TGraphErrors * graphErrors = new TGraphErrors(counter, xvec, yvec, xerr, yerr);
  delete [] xvec;
  delete [] yvec;
  delete [] xerr;
  delete [] yerr;
  delete hist;
  return graphErrors;
}


void AliTPCcalibBase::BinLogX(THnSparse *h, Int_t axisDim) {

  // Method for the correct logarithmic binning of histograms

  TAxis *axis = h->GetAxis(axisDim);
  int bins = axis->GetNbins();

  Double_t from = axis->GetXmin();
  Double_t to = axis->GetXmax();
  Double_t *new_bins = new Double_t[bins + 1];

  new_bins[0] = from;
  Double_t factor = pow(to/from, 1./bins);

  for (int i = 1; i <= bins; i++) {
   new_bins[i] = factor * new_bins[i-1];
  }
  axis->Set(bins, new_bins);
  delete [] new_bins;

}
void AliTPCcalibBase::BinLogX(TH1 *h) {

  // Method for the correct logarithmic binning of histograms

  TAxis *axis = h->GetXaxis();
  int bins = axis->GetNbins();

  Double_t from = axis->GetXmin();
  Double_t to = axis->GetXmax();
  Double_t *new_bins = new Double_t[bins + 1];

  new_bins[0] = from;
  Double_t factor = pow(to/from, 1./bins);

  for (int i = 1; i <= bins; i++) {
   new_bins[i] = factor * new_bins[i-1];
  }
  axis->Set(bins, new_bins);
  delete [] new_bins;

}
Commit	Line	Data
3ab35fc5	1	/**************************************************************************
	2	* Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. *
	3	* *
	4	* Author: The ALICE Off-line Project. *
	5	* Contributors are mentioned in the code where appropriate. *
	6	* *
	7	* Permission to use, copy, modify and distribute this software and its *
	8	* documentation strictly for non-commercial purposes is hereby granted *
	9	* without fee, provided that the above copyright notice appears in all *
	10	* copies and that both the copyright notice and this permission notice *
	11	* appear in the supporting documentation. The authors make no claims *
	12	* about the suitability of this software for any purpose. It is *
	13	* provided "as is" without express or implied warranty. *
	14	**************************************************************************/
	15
	16
	17	///////////////////////////////////////////////////////////////////////////////
	18	// //
	19	// Base class for the calibration components using
	20	// as input TPCseeds and ESDs
	21	// Event loop outside of the component
	22	//
	23	//
ae28e92e	24	// Base functionality to be implemeneted by component
	25	/*
	26	//In some cases only one of this function to be implemented
	27	virtual void Process(AliESDEvent *event)
	28	virtual void Process(AliTPCseed *track)
	29	//
	30	virtual Long64_t Merge(TCollection *li);
	31	virtual void Analyze()
	32	void Terminate();
	33	*/
	34	// Functionality provided by base class for Algorith debuging:
	35	// TTreeSRedirector * cstream = GetDebugStreamer() - get debug streamer which can be use for numerical debugging
	36	//
	37
	38
	39
	40	// marian.ivanov@cern.ch
3ab35fc5	41	//
3ab35fc5	42	#include "AliTPCcalibBase.h"
f7f33dec	43	#include "TSystem.h"
f7f33dec	44	#include "TFile.h"
ae28e92e	45	#include "TTreeStream.h"
47328338	46	#include "TTimeStamp.h"
52a5850f	47	#include "TGraph.h"
	48	#include "TGraphErrors.h"
	49	#include "TF1.h"
3226e48f	50	#include "TH1.h"
3226e48f	51	#include "THnSparse.h"
52a5850f	52	#include "TH1D.h"
52a5850f	53	#include "TH2D.h"
3226e48f	54	#include "TAxis.h"
52a5850f	55
	56
	57	#include "AliLog.h"
108953e9	58	#include "AliESDEvent.h"
f7f33dec	59
3ab35fc5	60
	61	ClassImp(AliTPCcalibBase)
	62
ae28e92e	63	AliTPCcalibBase::AliTPCcalibBase():
	64	TNamed(),
	65	fDebugStreamer(0),
108953e9	66	fStreamLevel(0),
	67	fRun(0), //! current Run number
	68	fEvent(0), //! current Event number
	69	fTime(0), //! current Time
	70	fTrigger(0), //! current trigger type
	71	fMagF(0), //! current magnetic field
c51653e8	72	fTriggerMaskReject(-1), //trigger mask - reject trigger
c51653e8	73	fTriggerMaskAccept(-1), //trigger mask - accept trigger
2d22fa36	74	fHasLaser(kFALSE), //flag the laser is overlayed with given event
2d22fa36	75	fRejectLaser(kTRUE), //flag- reject laser
15e48021	76	fTriggerClass(),
b842d904	77	fCurrentEvent(0), //! current event
b842d904	78	fCurrentTrack(0), //! current esd track
4486a91f	79	fCurrentFriendTrack(0), //! current esd track
b842d904	80	fCurrentSeed(0), //! current seed
ae28e92e	81	fDebugLevel(0)
3ab35fc5	82	{
	83	//
	84	// Constructor
	85	//
	86	}
	87
8cf12c96	88	AliTPCcalibBase::AliTPCcalibBase(const char * name, const char * title):
	89	TNamed(name,title),
	90	fDebugStreamer(0),
	91	fStreamLevel(0),
	92	fRun(0), //! current Run number
	93	fEvent(0), //! current Event number
	94	fTime(0), //! current Time
	95	fTrigger(0), //! current trigger type
	96	fMagF(0), //! current magnetic field
	97	fTriggerMaskReject(-1), //trigger mask - reject trigger
	98	fTriggerMaskAccept(-1), //trigger mask - accept trigger
	99	fHasLaser(kFALSE), //flag the laser is overlayed with given event
	100	fRejectLaser(kTRUE), //flag- reject laser
15e48021	101	fTriggerClass(),
b842d904	102	fCurrentEvent(0), //! current event
b842d904	103	fCurrentTrack(0), //! current esd track
4486a91f	104	fCurrentFriendTrack(0), //! current esd track
b842d904	105	fCurrentSeed(0), //! current seed
8cf12c96	106	fDebugLevel(0)
	107	{
	108	//
	109	// Constructor
	110	//
	111	}
	112
ae28e92e	113	AliTPCcalibBase::AliTPCcalibBase(const AliTPCcalibBase&calib):
	114	TNamed(calib),
	115	fDebugStreamer(0),
	116	fStreamLevel(calib.fStreamLevel),
e5cbd73f	117	fRun(0), //! current Run number
	118	fEvent(0), //! current Event number
	119	fTime(0), //! current Time
	120	fTrigger(0), //! current trigger type
	121	fMagF(0), //! current magnetic field
c51653e8	122	fTriggerMaskReject(calib.fTriggerMaskReject), //trigger mask - reject trigger
c51653e8	123	fTriggerMaskAccept(calib.fTriggerMaskAccept), //trigger mask - accept trigger
2d22fa36	124	fHasLaser(calib.fHasLaser), //flag the laser is overlayed with given event
2d22fa36	125	fRejectLaser(calib.fRejectLaser), //flag- reject laser
fe8454d9	126	fTriggerClass(calib.fTriggerClass),
b842d904	127	fCurrentEvent(0), //! current event
b842d904	128	fCurrentTrack(0), //! current esd track
4486a91f	129	fCurrentFriendTrack(0), //! current esd track
b842d904	130	fCurrentSeed(0), //! current seed
ae28e92e	131	fDebugLevel(calib.fDebugLevel)
	132	{
	133	//
	134	// copy constructor
	135	//
	136	}
	137
	138	AliTPCcalibBase &AliTPCcalibBase::operator=(const AliTPCcalibBase&calib){
	139	//
4486a91f	140	// operator=
ae28e92e	141	//
	142	((TNamed *)this)->operator=(calib);
	143	fDebugStreamer=0;
	144	fStreamLevel=calib.fStreamLevel;
	145	fDebugLevel=calib.fDebugLevel;
525062ee	146	return *this;
ae28e92e	147	}
	148
	149
3ab35fc5	150	AliTPCcalibBase::~AliTPCcalibBase() {
	151	//
	152	// destructor
	153	//
f7f33dec	154	if (fDebugLevel>0) printf("AliTPCcalibBase::~AliTPCcalibBase\n");
ae28e92e	155	if (fDebugStreamer) delete fDebugStreamer;
	156	fDebugStreamer=0;
	157	}
	158
	159	void AliTPCcalibBase::Terminate(){
	160	//
	161	//
	162	//
f7f33dec	163	if (fDebugLevel>0) printf("AliTPCcalibBase::Terminate\n");
ae28e92e	164	if (fDebugStreamer) delete fDebugStreamer;
	165	fDebugStreamer = 0;
	166	return;
	167	}
	168
	169	TTreeSRedirector *AliTPCcalibBase::GetDebugStreamer(){
	170	//
	171	// Get Debug streamer
	172	// In case debug streamer not yet initialized and StreamLevel>0 create new one
	173	//
	174	if (fStreamLevel==0) return 0;
	175	if (fDebugStreamer) return fDebugStreamer;
	176	TString dsName;
	177	dsName=GetName();
	178	dsName+="Debug.root";
	179	dsName.ReplaceAll(" ","");
	180	fDebugStreamer = new TTreeSRedirector(dsName.Data());
	181	return fDebugStreamer;
3ab35fc5	182	}
f7f33dec	183
f7f33dec	184
108953e9	185	void AliTPCcalibBase::UpdateEventInfo(AliESDEvent * event){
	186	//
	187	//
	188	//
	189	fRun = event->GetRunNumber();
	190	fEvent = event->GetEventNumberInFile();
	191	fTime = event->GetTimeStamp();
	192	fTrigger = event->GetTriggerMask();
	193	fMagF = event->GetMagneticField();
15e48021	194	fTriggerClass = event->GetFiredTriggerClasses().Data();
2d22fa36	195	fHasLaser = HasLaser(event);
15e48021	196
108953e9	197	}
108953e9	198
2d22fa36	199
	200	Bool_t AliTPCcalibBase::HasLaser(AliESDEvent *event){
	201	//
	202	//
	203	//
	204	// Thresholds more than 8 tracks with small dip angle
	205
	206	const Int_t kMinLaserTracks = 8;
	207	const Float_t kThrLaser = 0.3;
	208	const Float_t kLaserTgl = 0.01;
	209
	210	Int_t ntracks = event->GetNumberOfTracks();
	211	if (ntracks<kMinLaserTracks) return kFALSE;
	212	Float_t nlaser=0;
	213	Float_t nall=0;
	214	for (Int_t i=0;i<ntracks;++i) {
	215	AliESDtrack *track=event->GetTrack(i);
	216	if (!track) continue;
	217	if (track->GetTPCNcls()<=0) continue;
	218	nall++;
	219	if (TMath::Abs(track->GetTgl())<kLaserTgl) nlaser++;
	220	}
	221	if (nlaser>kMinLaserTracks) return kTRUE;
	222	if (nall>0 && nlaser/nall>kThrLaser) return kTRUE;
	223	return kFALSE;
	224	}
	225
	226
	227
c51653e8	228	Bool_t AliTPCcalibBase::AcceptTrigger(){
	229	//
	230	// Apply trigger mask - Don't do calibration for non proper triggers
	231	//
2d22fa36	232	if (fTriggerMaskReject==(Int_t)fTrigger) return kFALSE;
	233	if (fTriggerMaskAccept>0 && fTriggerMaskAccept!=(Int_t)fTrigger) return kFALSE;
	234	if (fHasLaser && fRejectLaser) return kFALSE;
c51653e8	235	return kTRUE;
	236	}
	237
	238
f7f33dec	239	void AliTPCcalibBase::RegisterDebugOutput(const char *path){
	240	//
	241	// store - copy debug output to the destination position
	242	// currently ONLY for local copy
	243	if (fDebugLevel>0) printf("AliTPCcalibBase::RegisterDebugOutput(%s)\n",path);
	244	if (fStreamLevel==0) return;
	245	TString dsName;
	246	dsName=GetName();
	247	dsName+="Debug.root";
	248	dsName.ReplaceAll(" ","");
	249	TString dsName2=path;
	250	gSystem->MakeDirectory(dsName2.Data());
	251	dsName2+=gSystem->HostName();
	252	gSystem->MakeDirectory(dsName2.Data());
	253	dsName2+="/";
47328338	254	TTimeStamp s;
	255	dsName2+=Int_t(s.GetNanoSec());
	256	dsName2+="/";
	257	gSystem->MakeDirectory(dsName2.Data());
f7f33dec	258	dsName2+=dsName;
	259	AliInfo(Form("copy %s\t%s\n",dsName.Data(),dsName2.Data()));
	260	printf("copy %s\t%s\n",dsName.Data(),dsName2.Data());
	261	TFile::Cp(dsName.Data(),dsName2.Data());
	262	}
52a5850f	263
	264
	265
70b0f0bf	266	TGraphErrors * AliTPCcalibBase::FitSlices(THnSparse h, Int_t axisDim1, Int_t axisDim2, Int_t minEntries, Int_t nmaxBin, Float_t fracLow, Float_t fracUp, Bool_t useMedian, TTreeSRedirector cstream, Int_t ival){
52a5850f	267	//
	268	// Fitting slices of the projection(axisDim1,axisDim2) of a sparse histogram
	269	//
3d549531	270	TF1 funcGaus("funcGaus","gaus");
52a5850f	271	TH2D * hist = h->Projection(axisDim1, axisDim2);
	272	Double_t *xvec = new Double_t[hist->GetNbinsX()];
	273	Double_t *yvec = new Double_t[hist->GetNbinsX()];
	274	Double_t *xerr = new Double_t[hist->GetNbinsX()];
	275	Double_t *yerr = new Double_t[hist->GetNbinsX()];
	276	Int_t counter = 0;
	277	TH1D * projectionHist =0;
	278	//
	279
6b8ef6d1	280	for(Int_t i=1; i <= hist->GetNbinsX(); i++) {
52a5850f	281	Int_t nsum=0;
	282	Int_t imin = i;
	283	Int_t imax = i;
	284
	285	for (Int_t idelta=0; idelta<nmaxBin; idelta++){
	286	//
	287	imin = TMath::Max(i-idelta,1);
	288	imax = TMath::Min(i+idelta,hist->GetNbinsX());
	289	nsum = TMath::Nint(hist->Integral(imin,imax,0,hist->GetNbinsY()));
	290	if (nsum==0) break;
	291	if (nsum>minEntries) break;
	292	}
	293	if (nsum<minEntries) continue;
	294	//
	295	hist->GetXaxis()->SetRange(imin,imax);
	296	projectionHist = hist->ProjectionY("gain",imin,imax);
	297	// Determine Median:
	298	Float_t xMin = projectionHist->GetXaxis()->GetXmin();
	299	Float_t xMax = projectionHist->GetXaxis()->GetXmax();
	300	Float_t xMedian = (xMin+xMax)*0.5;
d0b31f57	301	Float_t integral = 0;
	302	for(Int_t jbin=1; jbin<projectionHist->GetNbinsX()-1; jbin++) {
	303	integral+=projectionHist->GetBinContent(jbin);
	304	}
7f766801	305	//printf("Integral %f\t%f\n",integral, projectionHist->GetSum());
52a5850f	306	//
	307	//
	308	Float_t currentSum=0;
	309	for(Int_t jbin=1; jbin<projectionHist->GetNbinsX()-1; jbin++) {
	310	currentSum += projectionHist->GetBinContent(jbin);
d0b31f57	311	if (currentSum<fracLow*integral) xMin = projectionHist->GetBinCenter(jbin);
	312	if (currentSum<fracUp*integral) xMax = projectionHist->GetBinCenter(jbin+1);
	313	if (currentSum<0.5*integral && projectionHist->GetBinContent(jbin)>0){
52a5850f	314	xMedian = (projectionHist->GetBinCenter(jbin)*projectionHist->GetBinContent(jbin)+
	315	projectionHist->GetBinCenter(jbin+1)*projectionHist->GetBinContent(jbin+1))/
	316	(projectionHist->GetBinContent(jbin)+projectionHist->GetBinContent(jbin+1));
	317	}
	318	}
	319	//
	320	Float_t rms = projectionHist->GetRMS();
	321	// i += interval;
	322	//
	323	Double_t xcenter = hist->GetMean();
	324	Double_t xrms = hist->GetRMS()+hist->GetXaxis()->GetBinWidth(1)/TMath::Sqrt(12.);
	325	Double_t binWidth = projectionHist->GetXaxis()->GetBinWidth(1);
	326	if (rms>0){
52a5850f	327	// cut on +- 4 RMS
52a5850f	328	projectionHist->Fit(&funcGaus,"QN","",xMin, xMax);
3d549531	329	Double_t chi2 = funcGaus.GetChisquare();
52a5850f	330	//
52a5850f	331	xvec[counter] = xcenter;
70b0f0bf	332	yvec[counter] = funcGaus.GetParameter(ival);
52a5850f	333	xerr[counter] = xrms;
70b0f0bf	334	yerr[counter] = funcGaus.GetParError(ival);
3d549531	335	if (useMedian) yvec[counter] = xMedian;
	336	if (cstream){
	337	(*cstream)<<"fitDebug"<<
	338	"xcenter="<<xcenter<<
	339	"xMin="<<xMin<<
	340	"xMax="<<xMax<<
	341	"xMedian="<<xMedian<<
	342	"xFitM"<<yvec[counter]<<
	343	"xFitS"<<yerr[counter]<<
	344	"chi2="<<chi2<<
	345	"\n";
	346	}
52a5850f	347	counter++;
	348	}else{
	349	xvec[counter] = xcenter;
	350	yvec[counter] = xMedian;
	351	xerr[counter] = xrms;
	352	yerr[counter] = binWidth/TMath::Sqrt(12.);
	353	counter++;
	354	}
	355	delete projectionHist;
	356	}
	357
	358	TGraphErrors * graphErrors = new TGraphErrors(counter, xvec, yvec, xerr, yerr);
	359	delete [] xvec;
	360	delete [] yvec;
	361	delete [] xerr;
	362	delete [] yerr;
	363	delete hist;
	364	return graphErrors;
	365	}
3226e48f	366
	367
	368	void AliTPCcalibBase::BinLogX(THnSparse *h, Int_t axisDim) {
	369
	370	// Method for the correct logarithmic binning of histograms
	371
	372	TAxis *axis = h->GetAxis(axisDim);
	373	int bins = axis->GetNbins();
	374
	375	Double_t from = axis->GetXmin();
	376	Double_t to = axis->GetXmax();
	377	Double_t *new_bins = new Double_t[bins + 1];
	378
	379	new_bins[0] = from;
	380	Double_t factor = pow(to/from, 1./bins);
	381
	382	for (int i = 1; i <= bins; i++) {
	383	new_bins[i] = factor * new_bins[i-1];
	384	}
	385	axis->Set(bins, new_bins);
4ce766eb	386	delete [] new_bins;
3226e48f	387
	388	}
	389	void AliTPCcalibBase::BinLogX(TH1 *h) {
	390
	391	// Method for the correct logarithmic binning of histograms
	392
	393	TAxis *axis = h->GetXaxis();
	394	int bins = axis->GetNbins();
	395
	396	Double_t from = axis->GetXmin();
	397	Double_t to = axis->GetXmax();
	398	Double_t *new_bins = new Double_t[bins + 1];
	399
	400	new_bins[0] = from;
	401	Double_t factor = pow(to/from, 1./bins);
	402
	403	for (int i = 1; i <= bins; i++) {
	404	new_bins[i] = factor * new_bins[i-1];
	405	}
	406	axis->Set(bins, new_bins);
4ce766eb	407	delete [] new_bins;
3226e48f	408
3226e48f	409	}