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Adding functionality to visualize result for defferent setttings (Marian)
[u/mrichter/AliRoot.git] / TPC / CalibMacros / AnalyzeLaserCE.C
CommitLineData
9e7da9da 1/*
2
3Macro to perform fits of the Laser Central electrode data
4Several fit methods implemented
5
73e9c7cf 60. RebuildCE("ce.root","pul.root"); - rebuild data from the scratch
7 - the data will be storered in file inname
8
9e7da9da 91. RebuildData() - transform arbitrary layout of the Input data to the internal format
10 StoreData(); - The data tree expected in file inname (see variable bellow)
11 StoreTree(); - Modify inname and xxside and tcor in order to transform data
12
13
142. MakeFit(); - Make a fit of the data - already in internal format
15 StoreData(); - Store
16 StoreTree();
17
183. MakeRes(); - Make the final calibration + combination of different components
19
204. LoadViewer(); - Browse the fit parameters
21
22
23.x ~/rootlogon.C
24gSystem->AddIncludePath("-I$ALICE_ROOT/TPC -I$ALICE_ROOT/STAT");
25gSystem->Load("libSTAT.so");
26.L $ALICE_ROOT/TPC/CalibMacros/AnalyzeLaserCE.C+
0803cf01 27
9e7da9da 28// setup aliases
29qaside="CE_Q";
30taside="CE_T";
31raside="CE_RMS";
32qcside="CE_Q";
33tcside="CE_T";
34rcside="CE_RMS";
35
36
37
38
39Calibration viewer variables:
40
41Result - resulting correction
42out - outlyers not used for fit
43tcor - offset specified by user before fitting
44timeF1 - sector local fit - plane
45timeF2 - sector local fit - parabola
46timeIn - input times
47qIn - input charge
48out - outlyers not used for fit
49tcor - offset specified by user before fitting
50timeF1 - sector time local fit - plane
51timeF2 - sector time local fit - parabola
52qF1 - sector q local fit - plane
53qF2 - sector q local fit - parabola
54// fitted values
55//
56ffit0 - base fit
57ffit1 - adding common shifts - alpha dependendent
58ffit2 - adding opposite shifts - alpha dependent
59//
60fGXY - global fit parameter - XY
61fInOut - global fit parameter - inner-outer sector matching
62fLX - global LX dependence
63//
64Gloabl fit o consist of
65-fGXY~-fLX~-fTL~-fOff~:ffit0~
66
67//
68// Control variable - check results
69//
70//
0803cf01 71ffit2~-(timeIn~):lx~ - fit value minus input time
9e7da9da 72
73result cosntruction:
0803cf01 74(timeF2~-ffit2~+fTL~+fInOut~):Result~
9e7da9da 75//
76timeF2~-Result~:ffit2~-fTL~-fInOut~
77
78
79*/
2c55475e 80#include <fstream>
9e7da9da 81#include "TString.h"
82#include "TSystem.h"
83#include "TTree.h"
2c55475e 84#include "TEntryList.h"
73e9c7cf 85#include "TCut.h"
9e7da9da 86#include "TStatToolkit.h"
87#include "AliTPCCalibViewer.h"
88#include "AliTPCCalibViewerGUI.h"
89#include "AliTPCPreprocessorOnline.h"
90#include "AliTPCCalibCE.h"
73e9c7cf 91#include "AliTPCCalibPulser.h"
0803cf01 92#include "TStopwatch.h"
9e7da9da 93//
94//Define interesting variables - file names
95//
96char * inname = "treeCE.root"; // input file with tree
97//
98// variable name definition in input tree - change it according the input
99//
73e9c7cf 100TString qaside("CE_Q");
101TString taside("CE_T");
102TString raside("CE_RMS");
103TString qcside("CE_Q");
104TString tcside("CE_T");
105TString rcside("CE_RMS");
106
9e7da9da 107//
108// correction variable - usually Pulser time
109//
73e9c7cf 110TString tcor("-pulCorr");
9e7da9da 111
112//
113char * fname = "treefitCE.root"; // output file with tree
114char * oname = "fitCE.root"; // output file with CalPads fit
115
116//
117//
118// Input CalPads
119//
120AliTPCCalPad *calPadIn = 0; // original time pad
121AliTPCCalPad *calPadF1 = 0; // original time pad - fit plane
122AliTPCCalPad *calPadF2 = 0; // original time pad - fit parabola
123AliTPCCalPad *calPadQIn = 0; // original Q pad
124AliTPCCalPad *calPadQF1 = 0; // original Q pad
125AliTPCCalPad *calPadQF2 = 0; // original Q pad
126
127AliTPCCalPad *calPadCor = 0; // base correction CalPad
128AliTPCCalPad *calPadOut = 0; // outlyer CalPad
129//
130// cuts
131//
0803cf01 132const Float_t tThr=0.3; // max diff in the sector
9e7da9da 133const Float_t qThr0=0.5; // max Q diff in the sector
134const Float_t qThr1=2; // max Q diff in the sector
135
136//
137//
138// fit Cal Pads
139AliTPCCalPad *calPad0 = 0; // global fit 0 - base
140AliTPCCalPad *calPad1 = 0; // global fit 1 - common behavior rotation -A-C
141AliTPCCalPad *calPad2 = 0; // gloabl fit 2 - CE missalign rotation A-C
142//
143AliTPCCalPad *calPadInOut = 0; // misaalign in-out
144AliTPCCalPad *calPadLX = 0; // local x missalign
145AliTPCCalPad *calPadTL = 0; // tan
146AliTPCCalPad *calPadQ = 0; // time (q) correction
147AliTPCCalPad *calPadGXY = 0; // global XY missalign (drift velocity grad)
148AliTPCCalPad *calPadOff = 0; // normalization offset fit
149AliTPCCalPad *calPadRes = 0; // final calibration
150
0803cf01 151TObjString strFit0=""; // string fit 0
152TObjString strFit1=""; // string fit 1
153TObjString strFit2=""; // string fit 2
154TVectorD vecFit0; // parameters fit 0
155TVectorD vecFit1; // parameters fit 1
156TVectorD vecFit2; // parameters fit 2
2c55475e 157TEntryList *elist=0; // event list -slection criterias
9e7da9da 158//
159// working variables
160//
161AliTPCCalibViewerGUI * viewer=0; //viewerGUI
162AliTPCCalibViewer *makePad=0; //viewer
163TTree * tree=0; // working tree
164
165void LoadViewer();
166void RebuildData(); // transform the input data to the fit format
167void MakeFit(); // make fits
73e9c7cf 168void MakeFitPulser(); // make fit for pulser correction data
9e7da9da 169//
170// internal functions
171//
172void MakeAliases0(); // Make Aliases 0 - for user tree
173void MakeAliases1(); // Make Aliases 1 - for default tree
174void LoadData(); // Load data
175void StoreData(); // store current data
176void StoreTree(); // store fit data in the output tree
177
178
0803cf01 179
9e7da9da 180void AnalyzeLaser(){
181 //
182 //
183 //
184 LoadViewer();
185 MakeAliases1();
186}
187
73e9c7cf 188void MakeFitPulser(){
189 TStatToolkit stat;
190 Int_t npoints;
191 Double_t chi2;
192 TVectorD vec0,vec1,vec2;
193 TMatrixD mat;
194 TString fitvar="P_T.fElements";
195 TCut out("abs(P_T.fElements/P_T_Mean.fElements-1.001)<.002");
196 TCut fitadd("P_T.fElements>446");
197 TString fstring="";
198 fstring+="(sector>=0&&sector<9)++";
199 fstring+="(sector>=9&&sector<18)++";
200 fstring+="(sector>=18&&sector<27)++";
201 fstring+="(sector>=27&&sector<36)++";
202 fstring+="(sector>=36&&sector<45)++";
203 fstring+="(sector>=45&&sector<54)++";
204 fstring+="(sector>=54&&sector<63)++";
205 fstring+="(sector>=63&&sector<72)";
206
207 TString *pulOff =stat.FitPlane(tree,fitvar.Data(),fstring.Data(),(out+fitadd).GetTitle(),chi2,npoints,vec0,mat);
208
209 tree->SetAlias("pul0",pulOff->Data());
210 tree->SetAlias("pulCorr","P_T.fElements-pul0");
211 tree->SetAlias("pulOut",out.GetTitle());
212}
9e7da9da 213
214void MakeFit(){
215 //
216 //
217 LoadData();
0803cf01 218 //LoadViewer();
219 //
220 makePad = new AliTPCCalibViewer(fname);
221 tree = makePad->GetTree();
222 MakeAliases1();
223 //
224 // MakeFitPulser();
9e7da9da 225 TStatToolkit stat;
226 Int_t npoints;
227 Double_t chi2;
9e7da9da 228 TMatrixD mat;
229 TString fstring="";
230 //
231 //Basic correction
232 //
233 fstring+="side++"; // offset on 2 different sides //1
234 //fstring+="(1/qp)++"; // Q -threshold effect correction //2
235 //fstring+="(qp)++"; // Q -threshold effect correction //3
236 fstring+="(inn)++"; // inner outer misalign - common //4
237 fstring+="(side*inn)++"; // - opposite //5
238 //
239 fstring+="(gyr)++"; // drift velocity gradient - common //6
240 fstring+="(side*gyr)++"; // - opposite //7
241 fstring+="(gxr)++"; // global x tilt - common //8
242 fstring+="(side*gxr)++"; // - opposite //9
243 //
244 fstring+="tl^2++"; // local phi correction //10
245 //
246 fstring+="(lxr)++"; // zr angle - common //11
247 fstring+="(side*lxr)++"; // - opposite //12
248 fstring+="(inn*lxr)++"; // inner outer angle - common //13
249 fstring+="(side*inn*lxr)++";// - opposite //14
250 fstring+="(lxr^2)++"; // zr second - common //15
251 fstring+="(side*lxr^2)++"; // - opposite //16
0803cf01 252 fstring+="(inn*lxr^2)++"; // zr second - common //15
253 fstring+="(inn*side*lxr^2)++"; // - opposite //16
9e7da9da 254 //
0803cf01 255 printf("Fit0\t start\n");
256 TString *fit0 =stat.FitPlane(tree,"dt",fstring.Data(),"cutF&&cutCE",chi2,npoints,vecFit0,mat,0.9);
9e7da9da 257 tree->SetAlias("f0",fit0->Data());
0803cf01 258 strFit0 = fit0->Data();
259 printf("Fit0\t end\n");
260 printf("Chi2/npoints\t=%f\n",TMath::Sqrt(chi2/npoints));
261 fit0->Tokenize("++")->Print();
9e7da9da 262 //
0803cf01 263 printf("Global tendencies extraction\n");
9e7da9da 264 //
265 // Extract variables
266 //
267 TString tmpstr = fstring;
268 TObjArray *arr = tmpstr.Tokenize("++");
269 TString fitQ("0"); // q correction
270 TString fitLX("0"); // lx correction
271 TString fitInOut("0"); // inner-outer - match
272 TString fitGXY("0"); // global xy fit
273 TString fitOff("0"); // side offsets
274 TString fitTL("0"); // side offsets
275 //
276 fitOff+="+";
0803cf01 277 fitOff+=vecFit0[0];
9e7da9da 278 fitOff+="+side*";
0803cf01 279 fitOff+=vecFit0[1];
9e7da9da 280 {
281 for(Int_t i=0;i<arr->GetEntriesFast();i++){
282 if (!arr->At(i)) continue;
283 TString *fitstr = new TString(arr->At(i)->GetName());
284 //
285 //Bool_t isQ = fitstr->Contains("qp)");
286 Bool_t isRot = fitstr->Contains("sin(")+fitstr->Contains("cos(");
287 Bool_t isLX = fitstr->Contains("lxr");
288 Bool_t isIn = fitstr->Contains("inn");
289 Bool_t isGXY = fitstr->Contains("gxr")+fitstr->Contains("gyr");
290 if (fitstr->Contains("tl^2")){
291 fitTL+="+";
292 fitTL+=(*fitstr)+"*";
0803cf01 293 fitTL+=vecFit0[i+1];
9e7da9da 294 }
295 if (isGXY){
296 fitGXY+="+";
297 fitGXY+=(*fitstr)+"*";
0803cf01 298 fitGXY+=vecFit0[i+1];
9e7da9da 299 }
9e7da9da 300 //
301 if (isLX&&!isRot&&!isIn){
302 fitLX+="+";
303 fitLX+=(*fitstr)+"*";
0803cf01 304 fitLX+=vecFit0[i+1];
9e7da9da 305 }
306 //
307 if (!isRot&&isIn){
308 fitInOut+="+";
309 fitInOut+=(*fitstr)+"*";
0803cf01 310 fitInOut+=vecFit0[i+1];
9e7da9da 311 }
312 }
313 }
314 //
315 tree->SetAlias("fInOut",fitInOut.Data());
316 tree->SetAlias("fLX",fitLX.Data());
317 tree->SetAlias("fGXY",fitGXY.Data());
318 tree->SetAlias("fOff",fitOff.Data());
319 //tree->SetAlias("fQ",fitQ.Data());
320 tree->SetAlias("fTL",fitTL.Data());
0803cf01 321
9e7da9da 322 //
323 //
0803cf01 324 // Common "deformation" tendencies
325 //
326 fstring+="(sin(atan2(gy.fElements,gx.fElements)))++";
327 fstring+="(cos(atan2(gy.fElements,gx.fElements)))++";
328 //
329 fstring+="(sin(atan2(gy.fElements,gx.fElements)*2))++";
330 fstring+="(cos(atan2(gy.fElements,gx.fElements)*2))++";
331 fstring+="(sin(atan2(gy.fElements,gx.fElements)*3))++";
332 fstring+="(cos(atan2(gy.fElements,gx.fElements)*3))++";
333 //
334 fstring+="(sin(atan2(gy.fElements,gx.fElements)*2))*lxr++";
335 fstring+="(cos(atan2(gy.fElements,gx.fElements)*2))*lxr++";
336 fstring+="(sin(atan2(gy.fElements,gx.fElements)*3))*lxr++";
337 fstring+="(cos(atan2(gy.fElements,gx.fElements)*3))*lxr++";
338 //
339
340 TString *fit1 =stat.FitPlane(tree,"dt",fstring.Data(),"cutF&&cutCE",chi2,npoints,vecFit1,mat,0.9);
341 tree->SetAlias("f1",fit1->Data());
342 strFit1 = fit1->Data();
343 printf("Fit1\t end\n");
344 printf("Chi2/npoints\t=%f\n",TMath::Sqrt(chi2/npoints));
345 fit1->Tokenize("++")->Print();
346
347 //
348 // Central electrode "deformation"
349 //
350 fstring+="(side*sin(atan2(gy.fElements,gx.fElements)))++";
351 fstring+="(side*cos(atan2(gy.fElements,gx.fElements)))++";
352 //
353 fstring+="(side*sin(atan2(gy.fElements,gx.fElements)*2))++";
354 fstring+="(side*cos(atan2(gy.fElements,gx.fElements)*2))++";
355 fstring+="(side*sin(atan2(gy.fElements,gx.fElements)*3))++";
356 fstring+="(side*cos(atan2(gy.fElements,gx.fElements)*3))++";
9e7da9da 357 //
0803cf01 358 fstring+="(side*sin(atan2(gy.fElements,gx.fElements)*2))*lxr++";
359 fstring+="(side*cos(atan2(gy.fElements,gx.fElements)*2))*lxr++";
360 fstring+="(side*sin(atan2(gy.fElements,gx.fElements)*3))*lxr++";
361 fstring+="(side*cos(atan2(gy.fElements,gx.fElements)*3))*lxr++";
362
363 TString *fit2 =stat.FitPlane(tree,"dt",fstring.Data(),"cutF&&abs(dt-f0)<0.7&&cutCE",chi2,npoints,vecFit2,mat,0.9);
364 strFit2 = fit2->Data();
365 printf("Fit2\t end\n");
366 printf("Chi2/npoints\t=%f\n",TMath::Sqrt(chi2/npoints));
367 fit2->Tokenize("++")->Print();
368 tree->SetAlias("f2",fit2->Data());
369 //
370 //
371 //
9e7da9da 372 calPad0 = makePad->GetCalPad("f0","1", "ffit0");
373 calPad1 = makePad->GetCalPad("f1","1", "ffit1");
374 calPad2 = makePad->GetCalPad("f2","1", "ffit2");
375 calPadInOut = makePad->GetCalPad("fInOut","1", "fInOut");
376 calPadLX = makePad->GetCalPad("fLX","1", "fLX");
377 calPadTL = makePad->GetCalPad("fTL","1", "fTL");
378 //calPadQ = makePad->GetCalPad("fQ","1", "fQ");
379 calPadGXY = makePad->GetCalPad("fGXY","1", "fGXY");
380 calPadOff = makePad->GetCalPad("fOff","1", "fOff");
381}
382
73e9c7cf 383
384
9e7da9da 385void LoadViewer(){
386 //
387 // Load calib Viewer
388 //
389 TObjArray * array = AliTPCCalibViewerGUI::ShowGUI(fname);
390 viewer = (AliTPCCalibViewerGUI*)array->At(0);
391 makePad = viewer->GetViewer();
392 tree = viewer->GetViewer()->GetTree();
393 MakeAliases1();
394}
395
396
397
398
399
400
401void RebuildData(){
402 //
403 // transform the input data to the fit format
404 //
0803cf01 405 TStopwatch timer;
9e7da9da 406 makePad = new AliTPCCalibViewer(inname);
407 tree = makePad->GetTree();
0803cf01 408 //
409
410 timer.Print();
411 timer.Continue();
412 printf("-1. MaQkeFitPulser\n");
73e9c7cf 413 MakeFitPulser();
0803cf01 414 timer.Print();
415 timer.Continue();
9e7da9da 416 MakeAliases0(); //
417 //
418 printf("0. GetCalPads\n");
0803cf01 419 timer.Print();
9e7da9da 420 calPadCor = makePad->GetCalPad("tcor","1", "tcor");
0803cf01 421 calPadOut = makePad->GetCalPad("1","!((cutA||cutC)&&abs(ly.fElements/lx.fElements)<0.16)", "out");
422 calPadIn = makePad->GetCalPad("dt","1","timeIn");
423
424 calPadF1 = calPadIn->GlobalFit("timeF1", calPadOut,kFALSE,0,0,0.8); // use robust fit
9e7da9da 425 calPadQIn = makePad->GetCalPad("qa*(sector%36<18)+qc*(sector%36>17)","1","qIn");
426 //
427 //
428 printf("1. Create outlyer map\n");
0803cf01 429 timer.Print();
430 timer.Continue();
9e7da9da 431 //
432 // Update outlyer maps
433 //
434 for (Int_t isector=0;isector<72; isector++){
435 for (UInt_t ich=0;ich<calPadIn->GetCalROC(isector)->GetNchannels();ich++){
436 Float_t val0= calPadIn->GetCalROC(isector)->GetValue(ich);
437 Float_t val1= calPadF1->GetCalROC(isector)->GetValue(ich);
438 if (TMath::Abs(val0-val1)>tThr) calPadOut->GetCalROC(isector)->SetValue(ich,1);
439 }
440 }
0803cf01 441 printf("2. Fit sector parabolas\n");
442 timer.Print();
443 timer.Continue();
444 calPadF1 = calPadIn->GlobalFit("timeF1", calPadOut,kFALSE,0,0,0.9);
445 calPadF2 = calPadIn->GlobalFit("timeF2", calPadOut,kFALSE,1,0,0.9);
446 calPadQF1 = calPadQIn->GlobalFit("qF1", calPadOut,kFALSE,1);
9e7da9da 447 calPadQF2 = calPadQIn->GlobalFit("qF2", calPadOut,kFALSE,1);
448
449 //
450 // Update outlyer maps
451 //
0803cf01 452 printf("3. Update outlyer map\n");
9e7da9da 453 for (Int_t isector=0;isector<72; isector++){
454 for (UInt_t ich=0;ich<calPadIn->GetCalROC(isector)->GetNchannels();ich++){
455 Float_t val0= calPadQIn->GetCalROC(isector)->GetValue(ich);
456 Float_t val1= calPadQF2->GetCalROC(isector)->GetValue(ich);
0803cf01 457 if (val1<=0) {
9e7da9da 458 continue;
459 }
460 if (TMath::Abs(val0/val1)<qThr0) calPadOut->GetCalROC(isector)->SetValue(ich,1);
461 if (TMath::Abs(val0/val1)>qThr1) calPadOut->GetCalROC(isector)->SetValue(ich,1);
462 }
463 }
0803cf01 464 printf("4. Redo fit of the of parabola \n");
465 timer.Print();
466 timer.Continue();
73e9c7cf 467 //
468 //
469 AliTPCCalPad *calPadInCor = makePad->GetCalPad("dt","1","timeIn");
0803cf01 470 calPadF1 = calPadInCor->GlobalFit("timeF1", calPadOut,kFALSE,0,0.9);
471 calPadF2 = calPadInCor->GlobalFit("timeF2", calPadOut,kFALSE,1,0.9);
472 calPadQF1 = calPadQIn->GlobalFit("qF1", calPadOut,kFALSE,0,0,0.9);
473 calPadQF2 = calPadQIn->GlobalFit("qF2", calPadOut,kFALSE,1,0,0.9);
474 printf("5. End\n");
475 timer.Print();
476
9e7da9da 477}
478
479void LoadData(){
480 //
481 // Get Data
482 //
483 TFile f(oname);
484 calPadIn = (AliTPCCalPad*)f.Get("timeIn"); // original time pad
485 calPadF1 = (AliTPCCalPad*)f.Get("timeF1"); // original time pad - fit plane
486 calPadF2 = (AliTPCCalPad*)f.Get("timeF2"); // original time pad - fit parabola
487 //
488 calPadQIn = (AliTPCCalPad*)f.Get("qIn"); // original time pad
489 calPadQF1 = (AliTPCCalPad*)f.Get("qF1"); // original time pad - fit plane
490 calPadQF2 = (AliTPCCalPad*)f.Get("qF2"); // original time pad - fit parabola
491 //
492 calPadCor = (AliTPCCalPad*)f.Get("tcor"); // base correction CalPad
493 calPadOut = (AliTPCCalPad*)f.Get("out"); // outlyer CalPad
494 //
495 calPad0 = (AliTPCCalPad*)f.Get("ffit0"); // global fit 0 - base
496 calPad1 = (AliTPCCalPad*)f.Get("ffit1"); // global fit 1 - common behavior rotation -A-C
497 calPad2 = (AliTPCCalPad*)f.Get("ffit2"); // gloabl fit 2 - CE missalign rotation A-C
498 calPadInOut = (AliTPCCalPad*)f.Get("fInOut");// misaalign in-out
499 calPadLX = (AliTPCCalPad*)f.Get("fLX"); // local x missalign
500 calPadTL = (AliTPCCalPad*)f.Get("fTL"); // local y/x missalign
501 calPadQ = (AliTPCCalPad*)f.Get("fQ"); // time (q) correction
502 calPadGXY = (AliTPCCalPad*)f.Get("fGXY"); // global XY missalign (drift velocity grad)
503 calPadOff = (AliTPCCalPad*)f.Get("fOff"); // normalization offset fit
504 calPadRes = (AliTPCCalPad*)f.Get("Result"); //resulting calibration
505}
506
507void StoreData(){
508 //
509 // Store data
510 //
511 TFile * fstore = new TFile(oname,"recreate");
512 if (calPadIn) calPadIn->Write("timeIn"); // original time pad
513 if (calPadF1) calPadF1->Write("timeF1"); // original time pad - fit plane
514 if (calPadF2) calPadF2->Write("timeF2"); // original time pad - fit parabola
515 //
516 if (calPadQIn) calPadQIn->Write("qIn"); // original time pad
517 if (calPadQF1) calPadQF1->Write("qF1"); // original time pad - fit plane
518 if (calPadQF2) calPadQF2->Write("qF2"); // original time pad - fit parabola
519 //
520 if (calPadCor) calPadCor->Write("tcor"); // base correction CalPad
521 if (calPadOut) calPadOut->Write("out"); // outlyer CalPad
522 //
523 if (calPad0) calPad0->Write("ffit0"); // global fit 0 - base
524 if (calPad1) calPad1->Write("ffit1"); // global fit 1 - common behavior rotation -A-C
525 if (calPad2) calPad2->Write("ffit2"); // gloabl fit 2 - CE missalign rotation A-C
526 if (calPadInOut)calPadInOut->Write("fInOut"); // misaalign in-out
527 if (calPadLX) calPadLX->Write("fLX"); // local x missalign
528 if (calPadTL) calPadTL->Write("fTL"); // local y/x missalign
529 if (calPadQ) calPadQ->Write("fQ"); // time (q) correction
530 if (calPadGXY) calPadGXY->Write("fGXY"); // global XY missalign (drift velocity grad)
531 if (calPadOff) calPadOff->Write("fOff"); // normalization offset fit
532 if (calPadRes) calPadRes->Write("Result"); //resulting calibration
533 fstore->Close();
534 delete fstore;
535}
536
537void StoreTree(){
538 //
539 //
540 //
541 AliTPCPreprocessorOnline * preprocesor = new AliTPCPreprocessorOnline;
542 //
543 if (calPadIn) preprocesor->AddComponent(calPadIn->Clone());
544 if (calPadF1) preprocesor->AddComponent(calPadF1->Clone());
545 if (calPadF2) preprocesor->AddComponent(calPadF2->Clone());
546 //
547 if (calPadQIn) preprocesor->AddComponent(calPadQIn->Clone());
548 if (calPadQF1) preprocesor->AddComponent(calPadQF1->Clone());
549 if (calPadQF2) preprocesor->AddComponent(calPadQF2->Clone());
550 //
551 if (calPadCor) preprocesor->AddComponent(calPadCor->Clone());
552 if (calPadOut) preprocesor->AddComponent(calPadOut->Clone());
553 //
554 if (calPad0) preprocesor->AddComponent(calPad0->Clone());
555 if (calPad1) preprocesor->AddComponent(calPad1->Clone());
556 if (calPad2) preprocesor->AddComponent(calPad2->Clone());
557 if (calPadInOut)preprocesor->AddComponent(calPadInOut->Clone());
558 if (calPadLX) preprocesor->AddComponent(calPadLX->Clone());
559 if (calPadTL) preprocesor->AddComponent(calPadTL->Clone());
560 if (calPadQ) preprocesor->AddComponent(calPadQ->Clone());
561 if (calPadGXY) preprocesor->AddComponent(calPadGXY->Clone());
562 if (calPadOff) preprocesor->AddComponent(calPadOff->Clone());
563 if (calPadRes) preprocesor->AddComponent(calPadRes->Clone());
564 preprocesor->DumpToFile(fname);
565 delete preprocesor;
566}
567
568
569void MakeAliases0(){
570 //
571 // Define variables and selection of outliers - for user defined tree
572 //
573 tree->SetAlias("tcor",tcor.Data()); // correction variable
574 tree->SetAlias("ta",taside+".fElements");
575 tree->SetAlias("tc",tcside+".fElements");
576 tree->SetAlias("qa",qaside+".fElements");
577 tree->SetAlias("qc",qcside+".fElements");
578 tree->SetAlias("ra",raside+".fElements");
579 tree->SetAlias("rc",rcside+".fElements");
580 tree->SetAlias("side","1-(sector%36>17)*2");
581 tree->SetAlias("dt","(ta)*(sector%36<18)+(tc)*(sector%36>17)+tcor");
582 tree->SetAlias("cutA","qa>30&&qa<400&&abs(ta)<2&&ra>0.5&&ra<2");
583 tree->SetAlias("cutC","qc>30&&qc<400&&abs(tc)<2&&rc>0.5&&rc<2");
0803cf01 584 tree->SetAlias("cutF","((row.fElements+pad.fElements+sector)%19==0)"); // use just part of the statistic - 5 %
9e7da9da 585 tree->SetAlias("cutCE","V.out.fElements");
586 //
587 // fit param aliases
588 //
589 tree->SetAlias("inn","sector<36");
590 tree->SetAlias("gxr","(gx.fElements/250.)"); //
591 tree->SetAlias("gyr","(gy.fElements/250.)"); //
592 tree->SetAlias("lxr","(lx.fElements-133.41)/250.");
593 tree->SetAlias("qp","((sector%36<18)*sqrt(qa)/10.+(sector%36>17)*sqrt(qc)/10.)"); //
594 tree->SetAlias("tl","(ly.fElements/lx.fElements)/0.17");
595}
596
597
598void MakeAliases1(){
599 //
600 // Define variables and selection of outliers -for default usage
601 //
602 tree->SetAlias("tcor","tcor.fElements"); // correction variable
603 tree->SetAlias("side","1-(sector%36>17)*2");
0803cf01 604 tree->SetAlias("dt","timeIn.fElements");
9e7da9da 605 //
606 tree->SetAlias("cutA","out.fElements==1");
607 tree->SetAlias("cutC","out.fElements==1");
0803cf01 608 tree->SetAlias("cutF","((row.fElements+pad.fElements+sector.fElements)%19==0)"); // use just part of the statistic - 5 %
609
9e7da9da 610 tree->SetAlias("cutCE","out.fElements<0.5");
611 //
612 // fit param aliases
613 //
614 tree->SetAlias("inn","sector<36");
615 tree->SetAlias("gxr","(gx.fElements/250.)"); //
616 tree->SetAlias("gyr","(gy.fElements/250.)"); //
617 tree->SetAlias("lxr","(lx.fElements-133.41)/250.");
618 tree->SetAlias("qp","(sqrt(qIn.fElements)/10.+(out.fElements>0.5))"); //
619 tree->SetAlias("tl","(ly.fElements/lx.fElements)/0.17");
620}
621
622
623void MakeRes()
624{
625 //
626 // make final calibration
627 //
628 AliTPCCalPad * calPadRes0 =new AliTPCCalPad(*calPadIn);
9e7da9da 629 calPadRes0->Add(calPad2,-1); // remove global fit
630 calPadRes = calPadRes0->GlobalFit("Result", calPadOut,kTRUE,1,0.9);
631 //
632 //
633 {
634 Float_t tlmedian = calPadTL->GetMedian();
635 for (Int_t isector=0;isector<72; isector++){
636 for (UInt_t ich=0;ich<calPadIn->GetCalROC(isector)->GetNchannels();ich++){
637 //
638 //
639 Float_t val0 = calPadRes->GetCalROC(isector)->GetValue(ich);
640 if (TMath::Abs(val0)>0.5) calPadRes->GetCalROC(isector)->SetValue(ich,0);
641 Float_t tl = calPadTL->GetCalROC(isector)->GetValue(ich);
642 Float_t inOut = calPadInOut->GetCalROC(isector)->GetValue(ich);
643 calPadRes->GetCalROC(isector)->SetValue(ich,calPadRes->GetCalROC(isector)->GetValue(ich)+tl+inOut);
644 //
645 }
646 }
647 }
648 calPadRes->Add(calPadCor,-1); // remove back correction (e.g Pulser time 0)
9e7da9da 649}
650
651
652
653
73e9c7cf 654void RebuildCE(char *finname, char *pulname){
9e7da9da 655 //
656 // Transformation from the CE to the visualization-analisys output
657 //
658 // finname = CE_Vscan_Run_61684-50_170.root;
659 TFile f(finname);
660 AliTPCCalibCE * ce = (AliTPCCalibCE*)f.Get("AliTPCCalibCE");
661 //
662 AliTPCCalPad *padtime = new AliTPCCalPad((TObjArray*)ce->GetCalPadT0());
663 AliTPCCalPad *padRMS = new AliTPCCalPad((TObjArray*)ce->GetCalPadRMS());
664 AliTPCCalPad *padq = new AliTPCCalPad((TObjArray*)ce->GetCalPadQ());
665 padtime->SetName("CE_T");
666 padRMS->SetName("CE_RMS");
667 padq->SetName("CE_Q");
73e9c7cf 668
669 TFile f2(pulname);
670 AliTPCCalibPulser *pul = (AliTPCCalibPulser*)f2.Get("AliTPCCalibPulser");
671 AliTPCCalPad *pultime = new AliTPCCalPad((TObjArray*)pul->GetCalPadT0());
672 AliTPCCalPad *pulRMS = new AliTPCCalPad((TObjArray*)pul->GetCalPadRMS());
673 AliTPCCalPad *pulq = new AliTPCCalPad((TObjArray*)pul->GetCalPadQ());
674 pultime->SetName("P_T");
675 pulRMS->SetName("P_RMS");
676 pulq->SetName("P_Q");
677
678
9e7da9da 679 AliTPCPreprocessorOnline * preprocesor = new AliTPCPreprocessorOnline;
680 preprocesor->AddComponent(padtime);
681 preprocesor->AddComponent(padq);
682 preprocesor->AddComponent(padRMS);
73e9c7cf 683 preprocesor->AddComponent(pultime);
684 preprocesor->AddComponent(pulq);
685 preprocesor->AddComponent(pulRMS);
9e7da9da 686 preprocesor->DumpToFile(inname);
687}
0803cf01 688
689
690void AnalyzeLaserCE(){
691 RebuildCE("ce.root","pul.root");
692 StoreData();
693 StoreTree();
694 RebuildData();
695 StoreData();
696 StoreTree();
697 MakeFit();
698 StoreData();
699 StoreTree();
700 MakeRes();
701}
702
2c55475e 703
704
705void AddFiles(char *list){
706 //
707 // prepare viewer for data sets
708 //
709 fstream finput;
710 finput.open(list, ios_base::in);
711 //
712 TString currentFile;
713 Int_t counter=0;
714 if (!elist ) {
715 elist = new TEntryList("elist","elist");
716 tree->Draw(Form(">>elist%d",counter),"1","entrylist");
717 }
718 while(finput.good()) {
719 finput >> currentFile;
720 printf("Getting file%s\n",currentFile.Data());
721 TFile * fC = new TFile(currentFile.Data());
722 TTree * treeC = (TTree*) fC->Get("calPads");
723 makePad->AddFriend(treeC,Form("T%d",counter));
724 //
725 TString cutStrF1=Form("abs(T%d.timeIn.fElements-T%d.timeF1.fElements)<1.5",counter,counter);
726 TEntryList *celist = new TEntryList(Form("listF1%d",counter),Form("listF1%d",counter));
727 tree->Draw(Form(">>listF1%d",counter),cutStrF1,"entrylist");
728 if (celist->GetN()>0) elist->Add(celist);
729 counter++;
730 }
731 viewer->Reload();
732}
733
734void AnalyzeSectors(){
735 //
736 // Analyze sector by sector
737 //
738 TTreeSRedirector cstream("fits.root");
739 for (Int_t
740}