[u/mrichter/AliRoot.git] / TPC / TPCPEDESTALda.cxx

/*
TPC DA for online calibration

Contact: Haavard.Helstrup@cern.ch
Link:
Run Type: PEDESTAL
DA Type: LDC
Number of events needed: 100
Input Files: 
Output Files: tpcPedestal.root, to be exported to the DAQ FXS
fileId:   pedestals    
Trigger types used: CALIBRATION_EVENT

*/

/*

TPCda_pedestal.cxx - calibration algorithm for TPC pedestal runs

10/06/2007  sylvain.chapeland@cern.ch :  first version - clean skeleton based on DAQ DA case1
19/10/2007  christian.lippmann@cern.ch :  Possibility to write output to ASCII file
24/10/2007  christian.lippmann@cern.ch :  Including pedestal calibration for time bins
23/11/2007  christian.lippmann@cern.ch :  Fix in order to avoid streamer problems in case of
                                          invalid ROOTSTYS. The famous magic line provided by Rene.
28/11/2007  christian.lippmann@cern.ch :  TPC mapping file is read from DaqDetDB
18/09/2008  christian.lippmann@cern.ch :  Noisy channels are output to ASCII file. Use max noise in ALTRO.
19/09/2008  J.Wiechula@gsi.de:            Added export of the calibration data to the AMORE data base.
                                          Added support for configuration files.
31/01/2011  Christian.Lippmann@cern.ch :  Updates for changed setup at P2 with 2 LDCs per sector

contact: marian.ivanov@cern.ch

This process reads RAW data from the files provided as command line arguments
and save results in a file (named from RESULT_FILE define - see below).

*/

#define RESULT_FILE  "tpcPedestal.root"
#define FILE_ID "pedestals"
#define MAPPING_FILE "tpcMapping.root"
#define CONFIG_FILE "TPCPEDESTALda.conf"
#define PED_FILE "tpcPedestals.data"
#define NOISE_FILE "tpcNoise.data"
#define PEDMEM_FILE "tpcPedestalMem.data"
#define NOISY_FILE "tpcNoisyChannels.data"
#define VERYNOISY_FILE "tpcVeryNoisyChannels.data"
#define DEAD_FILE "tpcDeadChannels.data"
#define AliDebugLevel() -1

extern "C" {
#include <daqDA.h>
}
#include "event.h"
#include "monitor.h"

#include "stdio.h"
#include "stdlib.h"
#include <fstream>

//
//Root includes
//
#include "TFile.h"
#include "TArrayF.h"
#include "TROOT.h"
#include "TPluginManager.h"
#include "TSystem.h"
#include "TString.h"
#include "TObjString.h"
#include "TDatime.h"
//
//AliRoot includes
//
#include "AliRawReader.h"
#include "AliRawReaderDate.h"
#include "AliTPCmapper.h"
#include "AliTPCRawStream.h"
#include "AliTPCROC.h"
#include "AliTPCCalROC.h"
#include "AliTPCCalPad.h"
#include "AliMathBase.h"
#include "TTreeStream.h"
#include "AliLog.h"
#include "AliTPCConfigDA.h"

//
//AMORE
//
#include <AmoreDA.h>

//
// TPC calibration algorithm includes
//
#include "AliTPCCalibPedestal.h"

/*
  Main routine, TPC pedestal detector algorithm to be run on TPC LDC
  Arguments: list of DATE raw data files
*/

int main(int argc, char **argv) {
  //
  // Main for TPC pedestal detector algorithm
  //
  /* log start of process */
  printf("TPC DA started - %s\n",__FILE__);
  
  if (argc<2) {
    printf("Wrong number of arguments\n");
    return -1;
  }

  TString daterolename(gSystem->Getenv("DATE_ROLE_NAME"));
  if ( daterolename == "" ) {
    printf("Error: Variable DATE_ROLE_NAME not defined! Exiting ...\n");
    return -1;
  }
  bool inner;
  if      ( daterolename.EndsWith("-0") ) inner = true;
  else if ( daterolename.EndsWith("-1") ) inner = false;
  else {
    printf("Error: Variable DATE_ROLE_NAME neither ends with -0 nor -1 (E.g. ldc-TPC-C12-1)! Exiting ...\n");
    return -1;
  }

  AliLog::SetClassDebugLevel("AliTPCRawStream",-5);
  AliLog::SetClassDebugLevel("AliRawReaderDate",-5);
  AliLog::SetClassDebugLevel("AliTPCAltroMapping",-5);
  AliLog::SetModuleDebugLevel("RAW",-5);

  /* magic line */
  gROOT->GetPluginManager()->AddHandler("TVirtualStreamerInfo",
					"*",
					"TStreamerInfo",
					"RIO",
					"TStreamerInfo()");

  /* declare monitoring program */
  int i, status;
  status=monitorDeclareMp( __FILE__ );
  if (status!=0) {
    printf("monitorDeclareMp() failed : %s\n",monitorDecodeError(status));
    return -1;
  }
  
  // variables
  AliTPCmapper *mapping = 0;   // The TPC mapping
  char localfile[255];
  unsigned long32 runNb=0;     // run number
  // configuration options 
  Bool_t timeAnalysis = kTRUE;
  Bool_t fastDecoding = kFALSE;

  if (!mapping){
    /* copy locally the mapping file from daq detector config db */
    sprintf(localfile,"./%s",MAPPING_FILE);
    status = daqDA_DB_getFile(MAPPING_FILE,localfile);
    if (status) {
      printf("Failed to get mapping file (%s) from DAQdetDB, status=%d\n", MAPPING_FILE, status);
      return -1;
    }

    /* open the mapping file and retrieve mapping object */
    TFile *fileMapping = new TFile(MAPPING_FILE, "read");
    mapping = (AliTPCmapper*) fileMapping->Get("tpcMapping");
    delete fileMapping;
  }

  if (mapping == 0) {
    printf("Failed to get mapping object from %s.  ...\n", MAPPING_FILE);
    return -1;
  } else {
    printf("Got mapping object from %s\n", MAPPING_FILE);
  }

  //
  // DA configuration from configuration file
  //
  // retrieve configuration file
  sprintf(localfile,"./%s",CONFIG_FILE);
  status = daqDA_DB_getFile(CONFIG_FILE,localfile);
  if (status) {
    printf("Failed to get configuration file (%s) from DAQdetDB, status=%d\n", CONFIG_FILE, status);
    return -1;
  }
  AliTPCConfigDA config(CONFIG_FILE);
  // check configuration
  if ( (Int_t)config.GetValue("NoTimeAnalysis") == 1 ) {
    printf("WARNING: Time analysis was switched off in the configuration file!\n");
    timeAnalysis=kFALSE;
  }
  if ( (Int_t)config.GetValue("UseFastDecoder") == 1 ){
    printf("Info: The fast decoder will be used for the processing.\n");
    fastDecoding=kTRUE;
  }
  
  // create calibration object
  AliTPCCalibPedestal calibPedestal(config.GetConfigurationMap()); // pedestal and noise calibration
  calibPedestal.SetAltroMapping(mapping->GetAltroMapping()); // Use altro mapping we got from daqDetDb
  calibPedestal.SetTimeAnalysis(timeAnalysis);               // pedestal(t) calibration 
  
  //===========================//
  // loop over RAW data files //
  //==========================//
  int nevents=0;
  for ( i=1; i<argc; i++ ) {
    
    /* define data source : this is argument i */
    printf("Processing file %s\n", argv[i]);
    status=monitorSetDataSource( argv[i] );
    if (status!=0) {
      printf("monitorSetDataSource() failed. Error=%s. Exiting ...\n", monitorDecodeError(status));
      return -1;
    }
    
    /* read until EOF */
    for ( ; ; ) {
      struct eventHeaderStruct *event;
      
      /* check shutdown condition */
      if (daqDA_checkShutdown()) {break;}
      
      /* get next event (blocking call until timeout) */
      status=monitorGetEventDynamic((void **)&event);
      if (status==MON_ERR_EOF) {
        printf ("End of File %d (%s) detected\n", i, argv[i]);
        break; /* end of monitoring file has been reached */
      }
      
      if (status!=0) {
        printf("monitorGetEventDynamic() failed : %s\n",monitorDecodeError(status));
        break;
      }

      /* retry if got no event */
      if (event==NULL)
        continue;
      
      /* skip start/end of run events */
      if ( (event->eventType != physicsEvent) && (event->eventType != calibrationEvent) )
        continue;

      nevents++;
      // get the run number
      runNb = event->eventRunNb;
      //  Pedestal calibration
      calibPedestal.ProcessEvent(event);

      /* free resources */
      free(event);
    }
  }

  //
  // Analyse pedestals and write them to rootfile
  //
  calibPedestal.Analyse();
  calibPedestal.AnalyseTime(nevents);
  printf ("%d physics/calibration events processed.\n",nevents);

  TFile *fileTPC = new TFile(RESULT_FILE, "recreate");
  calibPedestal.Write("tpcCalibPedestal");
  delete fileTPC;
  printf("Wrote %s.\n",RESULT_FILE);

  /* store the result file on FES */
  status=daqDA_FES_storeFile(RESULT_FILE,FILE_ID);
  if (status) {
    status = -2;
  }
  //
  //Send objects to the AMORE DB
  //
  printf ("AMORE part\n");
  const char *amoreDANameorig=gSystem->Getenv("AMORE_DA_NAME");
  //cheet a little -- temporary solution (hopefully)
  //
  //currently amoreDA uses the environment variable AMORE_DA_NAME to create the mysql
  //table in which the calib objects are stored. This table is dropped each time AmoreDA
  //is initialised. This of course makes a problem if we would like to store different
  //calibration entries in the AMORE DB. Therefore in each DA which writes to the AMORE DB
  //the AMORE_DA_NAME env variable is overwritten.  

  //find processed sector
  Char_t sideName='A';
  Int_t sector = -1;
  for ( Int_t roc = 0; roc < 72; roc++ ) {
    if ( !calibPedestal.GetCalRocPedestal(roc) ) continue;
    if (mapping->GetSideFromRoc(roc)==1) sideName='C';
    sector = mapping->GetSectorFromRoc(roc);
  }
//   gSystem->Setenv("AMORE_DA_NAME",Form("TPC-%c%02d-%s",sideName,sector,FILE_ID));
  gSystem->Setenv("AMORE_DA_NAME",Form("%s-%s",gSystem->Getenv("DATE_ROLE_NAME"),FILE_ID));
  
  //
  // end cheet
  if (sector>-1){
    TDatime time;
    TObjString info(Form("Run: %u; Date: %s",runNb,time.AsSQLString()));
    
    amore::da::AmoreDA amoreDA(amore::da::AmoreDA::kSender);
    Int_t statusDA=0;
    statusDA+=amoreDA.Send("Pedestals",calibPedestal.GetCalPadPedestal());
    statusDA+=amoreDA.Send("Noise",calibPedestal.GetCalPadRMS());
    statusDA+=amoreDA.Send("Info",&info);
    if ( statusDA )
      printf("Warning: Failed to write one of the calib objects to the AMORE database\n");
  }  else {
    printf("Warning: No data found!\n");
  }
  // reset env var
  if (amoreDANameorig) gSystem->Setenv("AMORE_DA_NAME",amoreDANameorig);
  
  //
  // Now prepare ASCII files for local ALTRO configuration through DDL.
  //
  ofstream pedfile;
  ofstream noisefile;
  ofstream pedmemfile;
  ofstream noisychannelfile;
  ofstream verynoisychannelfile;
  ofstream deadchannelfile;

  pedfile.open(PED_FILE);
  noisefile.open(NOISE_FILE);
  pedmemfile.open(PEDMEM_FILE);
  noisychannelfile.open(NOISY_FILE);
  verynoisychannelfile.open(VERYNOISY_FILE);
  deadchannelfile.open(DEAD_FILE);

  TArrayF **timePed = calibPedestal.GetTimePedestals();  // pedestal values for each time bin

  Int_t ctr_channel = 0;
  Int_t ctr_altro   = 0;
  Int_t ctr_pattern = 0;
  Int_t ctr_noisy   = 0;
  Int_t ctr_vnoisy  = 0;
  Int_t ctr_dead    = 0;

  pedfile              << 10 << std::endl; // Mark file to contain PEDESTALS per channel
  noisefile            << 11 << std::endl; // Mark file to contain NOISE per altro
  pedmemfile           << 12 << std::endl; // Mark file to contain PEDESTALs per time bin
  noisychannelfile     << 14 << std::endl; // Mark file to contain NOISY or DEAD CHANNELS
  verynoisychannelfile << 14 << std::endl; // Mark file to contain NOISY or DEAD CHANNELS
  deadchannelfile      << 14 << std::endl; // Mark file to contain NOISY or DEAD CHANNELS

  // inner==true : calROC from ldc-0 contains: rcus 0,1 for IROC and rcu 2 for OROC 
  // inner==false: calROC from ldc-1 contains: nothing  for IROC and rcus 3,4,5 for OROC 
  for ( Int_t roc = 0; roc < 72; roc++ ) {
    if ( !calibPedestal.GetCalRocPedestal(roc) ) continue;
    bool isIROC  = mapping->IsIROC(roc);
    Int_t side   = mapping->GetSideFromRoc(roc);
    Int_t sector = mapping->GetSectorFromRoc(roc);
    Int_t minrcu, maxrcu;
    if      ( isIROC ) { minrcu=0; maxrcu=1; }
    else if ( inner  ) { minrcu=2; maxrcu=2; }
    else               { minrcu=3; maxrcu=5; }
    for ( int rcu = minrcu; rcu <= maxrcu; rcu++ ) {
      //Int_t patch = mapping->IsIROC(roc) ? rcu : rcu+2;
      for ( int branch = 0; branch < 2; branch++ ) {
        for ( int fec = 0; fec < mapping->GetNfec(rcu, branch); fec++ ) {
          for ( int altro = 0; altro < 8; altro++ ) {
            Float_t rms = 0.;
            Float_t maxrms = 0.;
            Float_t ctr_altrochannel = 0.;
            for ( int channel = 0; channel < 16; channel++ ) {
              Int_t hwadd     = mapping->CodeHWAddress(branch, fec, altro, channel);
              Int_t row       = mapping->GetPadRow(rcu, hwadd);        // row in a ROC
              Int_t globalrow = mapping->GetGlobalPadRow(rcu, hwadd);  // row in full sector
              Int_t pad       = mapping->GetPad(rcu, hwadd);
              Float_t ped     = calibPedestal.GetCalRocPedestal(roc)->GetValue(row,pad);
              // fixed pedestal
              pedfile << ctr_channel++ << "\t" << side << "\t" << sector << "\t" << rcu << "\t"
		      << hwadd << "\t" << ped << std::endl;
              // pedestal(t)=pedestal memories
              if ( timePed && fabs(timePed[globalrow][pad].GetSum()) > 1e-10 ) {
                pedmemfile << ctr_pattern++ << "\t" << side << "\t" << sector << "\t" << rcu
                    << "\t" << hwadd;
                for ( Int_t timebin = 0; timebin < 1024; timebin++ )
                  pedmemfile << "\t" << timePed[globalrow][pad].At(timebin);
                pedmemfile << std::endl;
              }
              // rms=noise
              Float_t rms2 = calibPedestal.GetCalRocRMS(roc)->GetValue(row,pad);
              if ( fabs(ped) < 1.e-10 ) {                        // dead channel
                deadchannelfile << ctr_dead++ << "\t" << side << "\t" << sector << "\t"
				<< rcu << "\t" << hwadd << "\t" << rms2 << std::endl;
              } else if ( (ped > 1.e-10) && (rms2 > 1.e-10) ) {  // not dead
		// Find noisy channels
                if ( rms2 > 6.0 ) { // VERY noisy
                  verynoisychannelfile << ctr_vnoisy++ << "\t" << side << "\t" << sector << "\t"
				       << rcu << "\t" << hwadd << "\t" << rms2 << std::endl;
		  
		} else if ( ((roc<36)             && (rms2 > 2.0))  ||  // IROC
			    ((roc>35) && (row<65) && (rms2 > 2.0))  ||  // OROC, small pads
			    ((roc>35) && (row>64) && (rms2 > 3.0)) ) {  // OROC, large pads (50% more signal)
                  noisychannelfile << ctr_noisy++ << "\t" << side << "\t" << sector << "\t"
				   << rcu << "\t" << hwadd << "\t" << rms2 << std::endl;
		} else {
		  // Not noisy. Get average and maximum noise in this ALTRO
		  rms += rms2;
		  ctr_altrochannel += 1.;
		  if (rms2 > maxrms) maxrms = rms2;
		} // end if noisy
              } // end if some signal
            } // end channel for loop
            Int_t hwadd = mapping->CodeHWAddress(branch, fec, altro, 0);   // ALTRO address
	    // Noise data (rms) averaged over all channels in this ALTRO.
            if ( ctr_altrochannel > 1.e-10 ) {
	      /*
	      // average noise of this ALTRO (excluding high-noise channels)
              noisefile << ctr_altro << "\t" << side << "\t" << sector << "\t" << rcu << "\t"
              << hwadd << "\t" << rms/ctr_altrochannel << std::endl;
	      */
	      // maximum noise of this ALTRO (excluding high-noise channels)
              noisefile << ctr_altro << "\t" << side << "\t" << sector << "\t" << rcu << "\t"
			<< hwadd << "\t" << maxrms << std::endl;
              ctr_altro++;
            }
          } // end altro for loop
        } // end fec for loop
      } // end branch for loop
    } // end rcu for loop
  } // end roc loop
  
  pedfile.close();
  noisefile.close();
  pedmemfile.close();
  noisychannelfile.close();
  verynoisychannelfile.close();
  deadchannelfile.close();
  printf("Wrote ASCII files. Found %d noisy, %d very noisy and %d dead channels.\n", ctr_noisy, ctr_vnoisy, ctr_dead);

  return status;

}
Commit	Line	Data
9c754ce7	1	/*
	2	TPC DA for online calibration
	3
	4	Contact: Haavard.Helstrup@cern.ch
	5	Link:
1b37fc95	6	Run Type: PEDESTAL
9c754ce7	7	DA Type: LDC
	8	Number of events needed: 100
	9	Input Files:
	10	Output Files: tpcPedestal.root, to be exported to the DAQ FXS
bd955ed2	11	fileId: pedestals
9c754ce7	12	Trigger types used: CALIBRATION_EVENT
	13
	14	*/
	15
c12208b8	16	/*
	17
	18	TPCda_pedestal.cxx - calibration algorithm for TPC pedestal runs
	19
	20	10/06/2007 sylvain.chapeland@cern.ch : first version - clean skeleton based on DAQ DA case1
49efac78	21	19/10/2007 christian.lippmann@cern.ch : Possibility to write output to ASCII file
	22	24/10/2007 christian.lippmann@cern.ch : Including pedestal calibration for time bins
	23	23/11/2007 christian.lippmann@cern.ch : Fix in order to avoid streamer problems in case of
	24	invalid ROOTSTYS. The famous magic line provided by Rene.
	25	28/11/2007 christian.lippmann@cern.ch : TPC mapping file is read from DaqDetDB
ac940b58	26	18/09/2008 christian.lippmann@cern.ch : Noisy channels are output to ASCII file. Use max noise in ALTRO.
	27	19/09/2008 J.Wiechula@gsi.de: Added export of the calibration data to the AMORE data base.
	28	Added support for configuration files.
e9d80afd	29	31/01/2011 Christian.Lippmann@cern.ch : Updates for changed setup at P2 with 2 LDCs per sector
c12208b8	30
	31	contact: marian.ivanov@cern.ch
	32
c12208b8	33	This process reads RAW data from the files provided as command line arguments
	34	and save results in a file (named from RESULT_FILE define - see below).
	35
	36	*/
	37
49efac78	38	#define RESULT_FILE "tpcPedestal.root"
bd955ed2	39	#define FILE_ID "pedestals"
49efac78	40	#define MAPPING_FILE "tpcMapping.root"
ac940b58	41	#define CONFIG_FILE "TPCPEDESTALda.conf"
e9d80afd	42	#define PED_FILE "tpcPedestals.data"
	43	#define NOISE_FILE "tpcNoise.data"
	44	#define PEDMEM_FILE "tpcPedestalMem.data"
	45	#define NOISY_FILE "tpcNoisyChannels.data"
	46	#define VERYNOISY_FILE "tpcVeryNoisyChannels.data"
	47	#define DEAD_FILE "tpcDeadChannels.data"
b401648b	48	#define AliDebugLevel() -1
c12208b8	49
	50	extern "C" {
	51	#include <daqDA.h>
	52	}
	53	#include "event.h"
	54	#include "monitor.h"
49efac78	55
	56	#include "stdio.h"
	57	#include "stdlib.h"
	58	#include <fstream>
c12208b8	59
	60	//
	61	//Root includes
	62	//
49efac78	63	#include "TFile.h"
	64	#include "TArrayF.h"
	65	#include "TROOT.h"
	66	#include "TPluginManager.h"
ac940b58	67	#include "TSystem.h"
	68	#include "TString.h"
	69	#include "TObjString.h"
	70	#include "TDatime.h"
c12208b8	71	//
	72	//AliRoot includes
	73	//
	74	#include "AliRawReader.h"
	75	#include "AliRawReaderDate.h"
87d57858	76	#include "AliTPCmapper.h"
c12208b8	77	#include "AliTPCRawStream.h"
	78	#include "AliTPCROC.h"
	79	#include "AliTPCCalROC.h"
	80	#include "AliTPCCalPad.h"
	81	#include "AliMathBase.h"
	82	#include "TTreeStream.h"
b401648b	83	#include "AliLog.h"
ac940b58	84	#include "AliTPCConfigDA.h"
	85
	86	//
	87	//AMORE
	88	//
	89	#include <AmoreDA.h>
c12208b8	90
	91	//
	92	// TPC calibration algorithm includes
	93	//
	94	#include "AliTPCCalibPedestal.h"
	95
bdf99a93	96	/*
	97	Main routine, TPC pedestal detector algorithm to be run on TPC LDC
	98	Arguments: list of DATE raw data files
c12208b8	99	*/
bdf99a93	100
c12208b8	101	int main(int argc, char **argv) {
bdf99a93	102	//
	103	// Main for TPC pedestal detector algorithm
	104	//
ac940b58	105	/* log start of process */
	106	printf("TPC DA started - %s\n",__FILE__);
	107
c12208b8	108	if (argc<2) {
	109	printf("Wrong number of arguments\n");
	110	return -1;
	111	}
e9d80afd	112
	113	TString daterolename(gSystem->Getenv("DATE_ROLE_NAME"));
	114	if ( daterolename == "" ) {
	115	printf("Error: Variable DATE_ROLE_NAME not defined! Exiting ...\n");
	116	return -1;
	117	}
	118	bool inner;
	119	if ( daterolename.EndsWith("-0") ) inner = true;
	120	else if ( daterolename.EndsWith("-1") ) inner = false;
	121	else {
	122	printf("Error: Variable DATE_ROLE_NAME neither ends with -0 nor -1 (E.g. ldc-TPC-C12-1)! Exiting ...\n");
	123	return -1;
	124	}
	125
ac940b58	126	AliLog::SetClassDebugLevel("AliTPCRawStream",-5);
	127	AliLog::SetClassDebugLevel("AliRawReaderDate",-5);
	128	AliLog::SetClassDebugLevel("AliTPCAltroMapping",-5);
	129	AliLog::SetModuleDebugLevel("RAW",-5);
c12208b8	130
49efac78	131	/* magic line */
49efac78	132	gROOT->GetPluginManager()->AddHandler("TVirtualStreamerInfo",
e9d80afd	133	"*",
	134	"TStreamerInfo",
	135	"RIO",
	136	"TStreamerInfo()");
c12208b8	137
c12208b8	138	/* declare monitoring program */
ac940b58	139	int i, status;
c12208b8	140	status=monitorDeclareMp( __FILE__ );
	141	if (status!=0) {
	142	printf("monitorDeclareMp() failed : %s\n",monitorDecodeError(status));
	143	return -1;
	144	}
ac940b58	145
ac940b58	146	// variables
b401648b	147	AliTPCmapper *mapping = 0; // The TPC mapping
ac940b58	148	char localfile[255];
	149	unsigned long32 runNb=0; // run number
	150	// configuration options
	151	Bool_t timeAnalysis = kTRUE;
	152	Bool_t fastDecoding = kFALSE;
	153
b401648b	154	if (!mapping){
b401648b	155	/* copy locally the mapping file from daq detector config db */
ac940b58	156	sprintf(localfile,"./%s",MAPPING_FILE);
ac940b58	157	status = daqDA_DB_getFile(MAPPING_FILE,localfile);
b401648b	158	if (status) {
b401648b	159	printf("Failed to get mapping file (%s) from DAQdetDB, status=%d\n", MAPPING_FILE, status);
ac940b58	160	return -1;
b401648b	161	}
49efac78	162
b401648b	163	/* open the mapping file and retrieve mapping object */
	164	TFile *fileMapping = new TFile(MAPPING_FILE, "read");
	165	mapping = (AliTPCmapper*) fileMapping->Get("tpcMapping");
49efac78	166	delete fileMapping;
b401648b	167	}
	168
	169	if (mapping == 0) {
	170	printf("Failed to get mapping object from %s. ...\n", MAPPING_FILE);
ac940b58	171	return -1;
49efac78	172	} else {
	173	printf("Got mapping object from %s\n", MAPPING_FILE);
	174	}
	175
ac940b58	176	//
	177	// DA configuration from configuration file
	178	//
	179	// retrieve configuration file
	180	sprintf(localfile,"./%s",CONFIG_FILE);
	181	status = daqDA_DB_getFile(CONFIG_FILE,localfile);
	182	if (status) {
	183	printf("Failed to get configuration file (%s) from DAQdetDB, status=%d\n", CONFIG_FILE, status);
	184	return -1;
	185	}
	186	AliTPCConfigDA config(CONFIG_FILE);
	187	// check configuration
	188	if ( (Int_t)config.GetValue("NoTimeAnalysis") == 1 ) {
	189	printf("WARNING: Time analysis was switched off in the configuration file!\n");
	190	timeAnalysis=kFALSE;
	191	}
	192	if ( (Int_t)config.GetValue("UseFastDecoder") == 1 ){
	193	printf("Info: The fast decoder will be used for the processing.\n");
	194	fastDecoding=kTRUE;
b401648b	195	}
ac940b58	196
	197	// create calibration object
	198	AliTPCCalibPedestal calibPedestal(config.GetConfigurationMap()); // pedestal and noise calibration
	199	calibPedestal.SetAltroMapping(mapping->GetAltroMapping()); // Use altro mapping we got from daqDetDb
30255695	200	calibPedestal.SetTimeAnalysis(timeAnalysis); // pedestal(t) calibration
ac940b58	201
	202	//===========================//
	203	// loop over RAW data files //
	204	//==========================//
c12208b8	205	int nevents=0;
bdf99a93	206	for ( i=1; i<argc; i++ ) {
ac940b58	207
c12208b8	208	/* define data source : this is argument i */
	209	printf("Processing file %s\n", argv[i]);
	210	status=monitorSetDataSource( argv[i] );
	211	if (status!=0) {
49efac78	212	printf("monitorSetDataSource() failed. Error=%s. Exiting ...\n", monitorDecodeError(status));
c12208b8	213	return -1;
c12208b8	214	}
ac940b58	215
c12208b8	216	/* read until EOF */
bdf99a93	217	for ( ; ; ) {
c12208b8	218	struct eventHeaderStruct *event;
ac940b58	219
c12208b8	220	/* check shutdown condition */
c12208b8	221	if (daqDA_checkShutdown()) {break;}
ac940b58	222
c12208b8	223	/* get next event (blocking call until timeout) */
	224	status=monitorGetEventDynamic((void **)&event);
	225	if (status==MON_ERR_EOF) {
ac940b58	226	printf ("End of File %d (%s) detected\n", i, argv[i]);
ac940b58	227	break; /* end of monitoring file has been reached */
c12208b8	228	}
ac940b58	229
c12208b8	230	if (status!=0) {
ac940b58	231	printf("monitorGetEventDynamic() failed : %s\n",monitorDecodeError(status));
ac940b58	232	break;
c12208b8	233	}
	234
	235	/* retry if got no event */
49efac78	236	if (event==NULL)
ac940b58	237	continue;
ac940b58	238
6e7d7dc4	239	/* skip start/end of run events */
	240	if ( (event->eventType != physicsEvent) && (event->eventType != calibrationEvent) )
	241	continue;
	242
c12208b8	243	nevents++;
ac940b58	244	// get the run number
ac940b58	245	runNb = event->eventRunNb;
c12208b8	246	// Pedestal calibration
5312f439	247	calibPedestal.ProcessEvent(event);
c12208b8	248
	249	/* free resources */
	250	free(event);
	251	}
	252	}
	253
49efac78	254	//
	255	// Analyse pedestals and write them to rootfile
	256	//
49efac78	257	calibPedestal.Analyse();
	258	calibPedestal.AnalyseTime(nevents);
	259	printf ("%d physics/calibration events processed.\n",nevents);
c12208b8	260
bdf99a93	261	TFile *fileTPC = new TFile(RESULT_FILE, "recreate");
e73181c9	262	calibPedestal.Write("tpcCalibPedestal");
c12208b8	263	delete fileTPC;
49efac78	264	printf("Wrote %s.\n",RESULT_FILE);
f2c72763	265
ac940b58	266	/* store the result file on FES */
	267	status=daqDA_FES_storeFile(RESULT_FILE,FILE_ID);
	268	if (status) {
	269	status = -2;
	270	}
	271	//
	272	//Send objects to the AMORE DB
	273	//
	274	printf ("AMORE part\n");
	275	const char *amoreDANameorig=gSystem->Getenv("AMORE_DA_NAME");
	276	//cheet a little -- temporary solution (hopefully)
	277	//
	278	//currently amoreDA uses the environment variable AMORE_DA_NAME to create the mysql
	279	//table in which the calib objects are stored. This table is dropped each time AmoreDA
	280	//is initialised. This of course makes a problem if we would like to store different
	281	//calibration entries in the AMORE DB. Therefore in each DA which writes to the AMORE DB
	282	//the AMORE_DA_NAME env variable is overwritten.
6a02fd57	283
	284	//find processed sector
	285	Char_t sideName='A';
ffcfd6fa	286	Int_t sector = -1;
6a02fd57	287	for ( Int_t roc = 0; roc < 72; roc++ ) {
	288	if ( !calibPedestal.GetCalRocPedestal(roc) ) continue;
	289	if (mapping->GetSideFromRoc(roc)==1) sideName='C';
	290	sector = mapping->GetSectorFromRoc(roc);
ac940b58	291	}
e9d80afd	292	// gSystem->Setenv("AMORE_DA_NAME",Form("TPC-%c%02d-%s",sideName,sector,FILE_ID));
e9d80afd	293	gSystem->Setenv("AMORE_DA_NAME",Form("%s-%s",gSystem->Getenv("DATE_ROLE_NAME"),FILE_ID));
ffcfd6fa	294
6a02fd57	295	//
6a02fd57	296	// end cheet
ffcfd6fa	297	if (sector>-1){
	298	TDatime time;
	299	TObjString info(Form("Run: %u; Date: %s",runNb,time.AsSQLString()));
	300
	301	amore::da::AmoreDA amoreDA(amore::da::AmoreDA::kSender);
	302	Int_t statusDA=0;
	303	statusDA+=amoreDA.Send("Pedestals",calibPedestal.GetCalPadPedestal());
	304	statusDA+=amoreDA.Send("Noise",calibPedestal.GetCalPadRMS());
	305	statusDA+=amoreDA.Send("Info",&info);
	306	if ( statusDA )
e9d80afd	307	printf("Warning: Failed to write one of the calib objects to the AMORE database\n");
ffcfd6fa	308	} else {
e9d80afd	309	printf("Warning: No data found!\n");
ffcfd6fa	310	}
6a02fd57	311	// reset env var
6a02fd57	312	if (amoreDANameorig) gSystem->Setenv("AMORE_DA_NAME",amoreDANameorig);
ffcfd6fa	313
bdf99a93	314	//
49efac78	315	// Now prepare ASCII files for local ALTRO configuration through DDL.
bdf99a93	316	//
bdf99a93	317	ofstream pedfile;
	318	ofstream noisefile;
	319	ofstream pedmemfile;
ac940b58	320	ofstream noisychannelfile;
e9d80afd	321	ofstream verynoisychannelfile;
e9d80afd	322	ofstream deadchannelfile;
ac940b58	323
e9d80afd	324	pedfile.open(PED_FILE);
	325	noisefile.open(NOISE_FILE);
	326	pedmemfile.open(PEDMEM_FILE);
	327	noisychannelfile.open(NOISY_FILE);
	328	verynoisychannelfile.open(VERYNOISY_FILE);
	329	deadchannelfile.open(DEAD_FILE);
bdf99a93	330
49efac78	331	TArrayF **timePed = calibPedestal.GetTimePedestals(); // pedestal values for each time bin
87d57858	332
bdf99a93	333	Int_t ctr_channel = 0;
ac940b58	334	Int_t ctr_altro = 0;
bdf99a93	335	Int_t ctr_pattern = 0;
ac940b58	336	Int_t ctr_noisy = 0;
e9d80afd	337	Int_t ctr_vnoisy = 0;
	338	Int_t ctr_dead = 0;
	339
	340	pedfile << 10 << std::endl; // Mark file to contain PEDESTALS per channel
	341	noisefile << 11 << std::endl; // Mark file to contain NOISE per altro
	342	pedmemfile << 12 << std::endl; // Mark file to contain PEDESTALs per time bin
	343	noisychannelfile << 14 << std::endl; // Mark file to contain NOISY or DEAD CHANNELS
	344	verynoisychannelfile << 14 << std::endl; // Mark file to contain NOISY or DEAD CHANNELS
	345	deadchannelfile << 14 << std::endl; // Mark file to contain NOISY or DEAD CHANNELS
	346
	347	// inner==true : calROC from ldc-0 contains: rcus 0,1 for IROC and rcu 2 for OROC
	348	// inner==false: calROC from ldc-1 contains: nothing for IROC and rcus 3,4,5 for OROC
bdf99a93	349	for ( Int_t roc = 0; roc < 72; roc++ ) {
bdf99a93	350	if ( !calibPedestal.GetCalRocPedestal(roc) ) continue;
e9d80afd	351	bool isIROC = mapping->IsIROC(roc);
49efac78	352	Int_t side = mapping->GetSideFromRoc(roc);
49efac78	353	Int_t sector = mapping->GetSectorFromRoc(roc);
e9d80afd	354	Int_t minrcu, maxrcu;
	355	if ( isIROC ) { minrcu=0; maxrcu=1; }
	356	else if ( inner ) { minrcu=2; maxrcu=2; }
	357	else { minrcu=3; maxrcu=5; }
	358	for ( int rcu = minrcu; rcu <= maxrcu; rcu++ ) {
	359	//Int_t patch = mapping->IsIROC(roc) ? rcu : rcu+2;
bdf99a93	360	for ( int branch = 0; branch < 2; branch++ ) {
e9d80afd	361	for ( int fec = 0; fec < mapping->GetNfec(rcu, branch); fec++ ) {
ac940b58	362	for ( int altro = 0; altro < 8; altro++ ) {
	363	Float_t rms = 0.;
	364	Float_t maxrms = 0.;
	365	Float_t ctr_altrochannel = 0.;
	366	for ( int channel = 0; channel < 16; channel++ ) {
	367	Int_t hwadd = mapping->CodeHWAddress(branch, fec, altro, channel);
e9d80afd	368	Int_t row = mapping->GetPadRow(rcu, hwadd); // row in a ROC
	369	Int_t globalrow = mapping->GetGlobalPadRow(rcu, hwadd); // row in full sector
	370	Int_t pad = mapping->GetPad(rcu, hwadd);
ac940b58	371	Float_t ped = calibPedestal.GetCalRocPedestal(roc)->GetValue(row,pad);
ac940b58	372	// fixed pedestal
e9d80afd	373	pedfile << ctr_channel++ << "\t" << side << "\t" << sector << "\t" << rcu << "\t"
	374	<< hwadd << "\t" << ped << std::endl;
	375	// pedestal(t)=pedestal memories
ac940b58	376	if ( timePed && fabs(timePed[globalrow][pad].GetSum()) > 1e-10 ) {
e9d80afd	377	pedmemfile << ctr_pattern++ << "\t" << side << "\t" << sector << "\t" << rcu
ac940b58	378	<< "\t" << hwadd;
	379	for ( Int_t timebin = 0; timebin < 1024; timebin++ )
	380	pedmemfile << "\t" << timePed[globalrow][pad].At(timebin);
	381	pedmemfile << std::endl;
	382	}
	383	// rms=noise
	384	Float_t rms2 = calibPedestal.GetCalRocRMS(roc)->GetValue(row,pad);
	385	if ( fabs(ped) < 1.e-10 ) { // dead channel
e9d80afd	386	deadchannelfile << ctr_dead++ << "\t" << side << "\t" << sector << "\t"
e9d80afd	387	<< rcu << "\t" << hwadd << "\t" << rms2 << std::endl;
ac940b58	388	} else if ( (ped > 1.e-10) && (rms2 > 1.e-10) ) { // not dead
e9d80afd	389	// Find noisy channels
	390	if ( rms2 > 6.0 ) { // VERY noisy
	391	verynoisychannelfile << ctr_vnoisy++ << "\t" << side << "\t" << sector << "\t"
	392	<< rcu << "\t" << hwadd << "\t" << rms2 << std::endl;
	393
	394	} else if ( ((roc<36) && (rms2 > 2.0)) \|\| // IROC
	395	((roc>35) && (row<65) && (rms2 > 2.0)) \|\| // OROC, small pads
	396	((roc>35) && (row>64) && (rms2 > 3.0)) ) { // OROC, large pads (50% more signal)
ac940b58	397	noisychannelfile << ctr_noisy++ << "\t" << side << "\t" << sector << "\t"
e9d80afd	398	<< rcu << "\t" << hwadd << "\t" << rms2 << std::endl;
	399	} else {
	400	// Not noisy. Get average and maximum noise in this ALTRO
	401	rms += rms2;
	402	ctr_altrochannel += 1.;
	403	if (rms2 > maxrms) maxrms = rms2;
	404	} // end if noisy
ac940b58	405	} // end if some signal
	406	} // end channel for loop
	407	Int_t hwadd = mapping->CodeHWAddress(branch, fec, altro, 0); // ALTRO address
e9d80afd	408	// Noise data (rms) averaged over all channels in this ALTRO.
ac940b58	409	if ( ctr_altrochannel > 1.e-10 ) {
e9d80afd	410	/*
	411	// average noise of this ALTRO (excluding high-noise channels)
	412	noisefile << ctr_altro << "\t" << side << "\t" << sector << "\t" << rcu << "\t"
ac940b58	413	<< hwadd << "\t" << rms/ctr_altrochannel << std::endl;
e9d80afd	414	*/
	415	// maximum noise of this ALTRO (excluding high-noise channels)
	416	noisefile << ctr_altro << "\t" << side << "\t" << sector << "\t" << rcu << "\t"
	417	<< hwadd << "\t" << maxrms << std::endl;
ac940b58	418	ctr_altro++;
	419	}
	420	} // end altro for loop
	421	} // end fec for loop
bdf99a93	422	} // end branch for loop
	423	} // end rcu for loop
	424	} // end roc loop
ac940b58	425
bdf99a93	426	pedfile.close();
	427	noisefile.close();
	428	pedmemfile.close();
ac940b58	429	noisychannelfile.close();
e9d80afd	430	verynoisychannelfile.close();
	431	deadchannelfile.close();
	432	printf("Wrote ASCII files. Found %d noisy, %d very noisy and %d dead channels.\n", ctr_noisy, ctr_vnoisy, ctr_dead);
87d57858	433
c12208b8	434	return status;
ac940b58	435
c12208b8	436	}