1st draft for pass0
[u/mrichter/AliRoot.git] / PWG4 / macros / AnalysisTrainPWG4Jets.C
... / ...
CommitLineData
1//===================== ANALYSIS TRAIN =========================================
2// To use: copy this macro to your work directory, modify the global part to match
3// your needs, then run root.
4// root[0] .L AnalysisTrain.C
5// Grid full mode as below (other modes: test, offline, submit, terminate)
6// root[1] AnalysisTrainPWG-244Jets("grid", "full")
7// CAF mode (requires root v5-23-02 + aliroot v4-16-Rev08)
8// root[2] AnalysisTrainPWG4Jets("proof")
9// Local mode requires AliESds.root or AliAOD.root in ./data directory
10// root[3] AnalysisTrainPWG4Jets("local")
11// In proof and grid modes, a token is needed and sourcing the produced environment file.
12//
13// If 'saveTrain' flag is set, the train will generate a directory name and run
14// in this directory. A configuration file 'ConfigTrain.C' will be generated.
15// One can replay at any time the train via:
16// root[1] AnalysisTrainPWG4Jets(ana_mode, plugin_mode, "train_default_<date>/ConfigTrain.C")
17
18// For Usage with fastjet run in "offline" first and then "submit"
19// jdl and analysismacro are automatically patched after "offline" mode
20
21// =============================================================================
22// ### General Steering variables
23// =============================================================================
24//== general setup variables
25TString kTrainName = "testAnalysis"; // *CHANGE ME* (no blancs or special characters)
26TString kJobTag = "PWG4 Jet Tasks analysis train configured"; // *CHANGE ME*
27
28// Usage of par files ONLY in grid mode and ONLY if the code is not available
29// in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
30// To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
31// AliRoot.
32Bool_t kUsePAR = kFALSE; // use par files for extra libs
33Bool_t kUseCPAR = kFALSE; // use par files for common libs
34Bool_t kFillAOD = kFALSE; // switch of AOD filling for on the fly analysis
35Bool_t kFilterAOD = kTRUE;
36Int_t kSaveAOD = 8; // Bit switch 1 = Full AOD 2 = Jet AOD , 4 = PartCorr, 8 = JCORRAN
37//== general input and output variables
38
39Int_t iAODanalysis = 1; // Analysis on input AOD's
40Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
41Int_t iCentralitySelection = 0; // Use the centrality
42Int_t iESDfilter = 0; // ESD to AOD filter (barrel + muon tracks)
43Int_t iPhysicsSelection = 1; // ESD to AOD filter (barrel + muon tracks)
44UInt_t iPhysicsSelectionFlag = 1; // set by pyshics selection and passed to the task, kMB, kUserDefined etc
45Bool_t useTender = kFALSE; // use tender wagon
46Bool_t kUseKinefilter = kFALSE; // use Kinematics filter
47Bool_t kUseMuonfilter = kFALSE; // use Kinematics filter
48TString kCommonOutputFileName = "PWG4_JetTasksOutput.root";
49TString kCaloQAOutputFileName = "PWG4_CaloQAOutput.root";
50
51
52//== general process variables
53
54// ### Other flags to steer the analysis
55//==============================================================================
56Bool_t kSkipTerminate = kTRUE; // Do not call Teminate
57Bool_t kUseDate = kFALSE; // use date in train name
58Bool_t kUseDebug = kTRUE; // activate debugging
59Int_t kErrorIgnoreLevel = -1; // takes the errror print level from .rootrc
60// From TError.h:
61// const Int_t kUnset = -1;
62// const Int_t kPrint = 0;
63// const Int_t kInfo = 1000;
64// const Int_t kWarning = 2000;
65// const Int_t kError = 3000;
66// const Int_t kBreak = 4000;
67// const Int_t kSysError = 5000;
68// const Int_t kFatal = 6000;
69Int_t kUseSysInfo = 0; // activate debugging
70Long64_t kNumberOfEvents = 1234567890; // number of events to process from the chain
71Bool_t kUseMC = kTRUE; // use MC info
72Bool_t kIsMC = kTRUE; // is MC info, if false it overwrites Use(AOD)MC
73Bool_t kUseAODMC = kTRUE; // use MC infA
74Bool_t kUseESDTags = kFALSE; // use ESD tags for selection
75Bool_t kUseTR = kFALSE; // use track references
76Bool_t kUseAODTags = kFALSE; // use AOD tags
77Bool_t kSaveTrain = kFALSE; // save train configuration as:
78Bool_t kIsPbPb = kFALSE; // Pb+Pb
79
80
81// ### Analysis modules to be included. Some may not be yet fully implemented.
82//==============================================================================
83Int_t iJETAN = 1; // Jet analysis (PWG4) // 1 write standard 2 write non-standard jets, 3 wrtie both
84Int_t iJETSUBTRACT = 1; // Jet background subtration
85TString kDefaultJetBranch = ""; // is currently set when filled (iJETAN or clusters) or from config macro
86TString kDefaultJetBackgroundBranch = ""; // is currently set when filled (jet clsuters
87TString kDefaultJetBackgroundBranch_extra = ""; // is currently set when filled (jet clsuters)
88TString kJetSubtractBranches = ""; // is currently set when filled (jet clsuters
89TString kJetSubtractBranches_extra = ""; // is currently set when filled (jet clsuters
90
91TString kDefaultJetBranchMC = ""; // is currently set when filled (iJETAN or clusters) or from config macro
92TString kDefaultJetBackgroundBranchMC = ""; // is currently set when filled (jet clsuters
93TString kDefaultJetBranchMC2 = ""; // is currently set when filled (iJETAN or clusters) or from config macro
94TString kDefaultJetBackgroundBranchMC2 = ""; // is currently set when filled (jet clsuters
95TString kJetSubtractMask1 = "B0";
96TString kJetSubtractMask2 = "B%d";
97Int_t iDIJETAN = 1;
98Int_t iJETANLib = 1;
99Int_t iPWG1QASym = 0; // Eva's QA task compiled on the fly...
100Int_t iPWG4FastEmbedding = 0; // Generate non-standard AOD for embedding
101Int_t iPWG4JetTasks = 0; // all jet tasks flag for lib laoding
102Int_t iPWG4JetServices = 0; // jet spectrum analysis
103Int_t iPWG4JetSpectrum = 0; // jet spectrum analysis
104Int_t iPWG4JetResponse = 0; // jet response matrix
105Int_t iPWG4JCORRAN = 0; // JCORRAN module
106Int_t iPWG4UE = 0; // Underlying Event analysis
107Int_t iPWG4LeadingUE = 0; // Underlying Event analysis
108Int_t iPWG4CorrectionsUE = 0; // Underlying Event analysis
109Int_t iPWG4TmpSourceSara = 0; // Underlying Event analysis not in svn
110Int_t iPWG4Fragmentation = 0; // Official Fragmentation
111Int_t iPWG4JetChem = 0; // Jet chemistry
112Int_t iPWG4PtQAMC = 0; // Marta's QA tasks
113Int_t iPWG4PtSpectra = 0; // Marta's QA tasks
114Int_t iPWG4PtQATPC = 0; // Marta's QA tasks
115Int_t iPWG4Cosmics = 0; // Marta's Cosmics Taks
116Int_t iPWG4ThreeJets = 0; // Sona's thrust task
117Int_t iPWG4QGSep = 0; // Sona's QG Separation task
118Int_t iPWG4Minijet = 0; // Eva's Mini Jet Task cluster task
119Int_t iPWG4KMeans = 0; // Andreas' KMeans task
120Int_t iPWG4Cluster = 0; // CKB cluster task
121Int_t iEMCUtilLibs = 0; // Flag to satisfy dependence on EMC utils
122Int_t iPWG4PartCorrLibs = 0; // Gustavo's part corr analysis
123Int_t iPWG4PartCorr = 0; // Gustavo's part corr analysis
124Int_t iPWG4CaloQA = 0; // Gustavo's part corr analysis
125Int_t iPWG4JetCorr = 0; // Paul's jet corr analysis
126Int_t iPWG4Tagged = 0; // Gustavo's part corr analysis
127Int_t iPWG4omega3pi = 0; // Omega to 3 pi analysis (PWG4)
128Int_t iPWG4GammaConvLib = 0; // Gamma Conversio
129Int_t iPWG4GammaConv = 0; // Gamma Conversio
130Int_t iPWG4CaloConv = 0; // Gamma Conversio
131Int_t kHighPtFilterMask = 32; // change depending on the used AOD Filter
132TString kDeltaAODJetName = "AliAOD.Jets.root";
133TString kDeltaAODJCORRANName = "AliAOD.JCORRAN.root";
134TString kDeltaAODPartCorrName = "AliAOD.PartCorr.root";
135TString kFastEmbeddingAOD = "emb/AliAOD.root";
136TString kFastEmbAODList = "";
137
138//==============================================================================
139// ### PROOF Steering varibales
140//==============================================================================
141//== proof setup variables
142TString kProofCluster = "alicecaf.cern.ch";
143Bool_t kProofUseAFPAR = kFALSE; // use AF special par file
144TString kProofAFversion = "AF-v4-17";
145//== proof input and output variables
146TString kProofDataSet = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
147Bool_t kProofSaveToAlien = kFALSE; // save proof outputs in AliEn train_[trainName]_ddMonthyyyy_time.C
148TString kProofOutdir = "";
149Bool_t kProofClearPackages = kFALSE;
150Int_t kProofEvents = 10000;
151Int_t kProofOffset = 0;
152//== proof process variables
153
154
155//==============================================================================
156// ### Grid plugin Steering varibiables
157//==============================================================================
158//== grid plugin setup variables
159Bool_t kPluginUse = kTRUE; // do not change
160Bool_t kPluginUseProductionMode = kFALSE; // use the plugin in production mode
161TString kPluginRootVersion = "v5-27-06b"; // *CHANGE ME IF MORE RECENT IN GRID*
162TString kPluginAliRootVersion = "v4-19-15-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
163Bool_t kPluginMergeViaJDL = kTRUE; // merge via JDL
164Bool_t kPluginFastReadOption = kFALSE; // use xrootd tweaks
165Bool_t kPluginOverwriteMode = kTRUE; // overwrite existing collections
166Int_t kPluginOutputToRunNumber = 1; // write the output to subdirs named after run number
167// TString kPluginExecutableCommand = "root -b -q";
168TString kPluginExecutableCommand = "source /Users/kleinb/setup_32bit_aliroot_trunk_clean_root_trunk.sh; alienroot -b -q ";
169
170// == grid plugin input and output variables
171TString kGridDatadir = "/alice/sim/PDC_08b/LHC09a1/AOD/";
172Int_t kGridMaxRunsFromList = 999999999;
173Int_t kGridOffsetRunFromList = 0; // skip the first n runs from the list
174TString kGridLocalRunList = "";
175TString kGridOutdir = ""; // AliEn output directory. If blank will become output_<kTrainName>
176TString kGridDataSet = ""; // sub working directory not to confuse different run xmls
177Int_t kGridRunRange[2] = {0, -1}; // Set the run range
178TString kGridRunPattern = "%03d"; // important for leading zeroes!!
179TString kGridPassPattern = "";
180TString kGridExtraFiles = ""; // files that will be added to the input list in the JDL...
181Int_t kGridMaxMergeFiles = 25; // Number of files merged in a chunk grid run range
182TString kGridMergeExclude = "AliAOD.root"; // Files that should not be merged
183TString kGridOutputStorages = "disk=2"; // Make replicas on the storages
184// == grid process variables
185Int_t kGridRunsPerMaster = 100; // Number of runs per master job
186Int_t kGridFilesPerJob = 100; // Maximum number of files per job (gives size of AOD)
187
188//==============================================================================
189// ### Local Steering variables
190//==============================================================================
191//== local setup variables
192//== local input and output variables
193TString kLocalXMLDataset = ""; // Change local xml dataset for local interactive analysis
194TString kLocalDataList = "local_deltaaod.txt"; // Change local xml dataset for local interactive analysis
195// == local process variables
196
197TString kPluginMode = "";
198TString kAnalysisMode = "";
199
200
201// Temporaries.
202TString anaPars = "";
203TString anaLibs = "";
204TString anaLibsExtra = "";
205TString anaSources = "";
206// Function signatures
207class AliAnalysisAlien;
208
209//______________________________________________________________________________
210void AnalysisTrainPWG4Jets(const char *analysis_mode="local",
211 const char *plugin_mode="",
212 const char *config_file="",Int_t iOffset = 0,Int_t iTotal = 0)
213{
214// Main analysis train macro. If a configuration file is provided, all parameters
215// are taken from there but may be altered by CheckModuleFlags.
216
217 // these flag may be needed by the config file
218 kPluginMode = plugin_mode;
219 kAnalysisMode = analysis_mode;
220
221 if (strlen(config_file) && !LoadConfig(config_file)) return;
222 if(iTotal>0)kGridMaxRunsFromList = iTotal; // overwrites the settings from config file
223 if(iOffset)kGridOffsetRunFromList = iOffset;
224 if(iOffset)kProofOffset = iOffset;
225
226
227 TString smode(analysis_mode);
228 smode.ToUpper();
229 if (kSaveTrain)WriteConfig();
230 // Check compatibility of selected modules
231 CheckModuleFlags(smode);
232 // gROOT->ProcessLine(".trace");
233
234 printf("==================================================================\n");
235 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", kTrainName.Data(),smode.Data());
236 printf("==================================================================\n");
237 printf("= Configuring analysis train for: =\n");
238 if (iAODanalysis) printf("= AOD analysis =\n");
239 else printf("= ESD analysis =\n");
240 if (iPhysicsSelection) printf("= Physics selection =\n");
241 if(iCentralitySelection)printf("= Centrality selection =\n");
242 if (useTender) printf("= Using tender =\n");
243 if (iESDfilter) printf("= ESD filter =\n");
244 if (iJETAN) printf("= Jet analysis =\n");
245 printf("==================================================================\n");
246
247 char *printMask = ":: %20s %10d\n";
248 printf(printMask,"Fill AOD",(UInt_t)kFillAOD);
249 printf(printMask,"Save AOD", (UInt_t)kSaveAOD);
250 printf(printMask,"MC truth", (UInt_t)kUseMC);
251 printf(printMask,"KINE filter", (UInt_t)kUseKinefilter);
252 printf(printMask,"track refs", (UInt_t)kUseTR);
253 printf(printMask,"tags", (UInt_t)kUseESDTags);
254 printf(printMask,"AOD tags", (UInt_t)kUseAODTags);
255 printf(printMask,"debugging", (UInt_t)kUseDebug);
256 printf(printMask,"PAR files", (UInt_t)kUsePAR);
257 printf(printMask,"AliEn plugin", (UInt_t)kPluginUse);
258 printf(printMask,"JETAN subtract", (UInt_t)iJETSUBTRACT);
259 printf(printMask,"PWG1 QA sym", iPWG1QASym);
260 printf(printMask,"PWG4 Source Sara",iPWG4TmpSourceSara);
261 printf(printMask,"PWG4 Fragmentation",iPWG4Fragmentation);
262 printf(printMask,"PWG4 Jet Chem",iPWG4JetChem);
263 printf(printMask,"PWG4 Jet tasks",iPWG4JetTasks);
264 printf(printMask,"PWG4 Jet Services",iPWG4JetServices);
265 printf(printMask,"PWG4 Jet Spectrum",iPWG4JetSpectrum);
266 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
267 printf(printMask,"PWG4 UE",iPWG4UE);
268 printf(printMask,"PWG4 Leading UE",iPWG4LeadingUE);
269 printf(printMask,"PWG4 Corrections UE",iPWG4CorrectionsUE);
270 printf(printMask,"PWG4 Pt QA MC",iPWG4PtQAMC);
271 printf(printMask,"PWG4 Pt Spectra",iPWG4PtSpectra);
272 printf(printMask,"PWG4 Pt QA TPC",iPWG4PtQATPC);
273 printf(printMask,"PWG4 Cosmics",iPWG4Cosmics);
274 printf(printMask,"PWG4 Three Jets",iPWG4ThreeJets);
275 printf(printMask,"PWG4 QGSep",iPWG4QGSep);
276 printf(printMask,"PWG4 Minijet",iPWG4Minijet);
277 printf(printMask,"PWG4 KMeans",iPWG4KMeans);
278 printf(printMask,"PWG4 Cluster",iPWG4Cluster);
279 printf(printMask,"PWG4 Part Corr",iPWG4PartCorr);
280 printf(printMask,"PWG4 Calo QA",iPWG4CaloQA);
281 printf(printMask,"PWG4 Jet Corr",iPWG4JetCorr);
282 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
283 printf(printMask,"PWG4 Tagged",iPWG4Tagged);
284 printf(printMask,"PWG4 omega to 3 pi ",iPWG4omega3pi);
285 printf(printMask,"PWG4 Gamma Conv",iPWG4GammaConv);
286 printf(printMask,"PWG4 Calo Conv",iPWG4CaloConv);
287 printf(printMask,"HighPt FilterMask",kHighPtFilterMask);
288
289 //==========================================================================
290 // Connect to back-end system
291 if (!Connect(smode)) {
292 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
293 return;
294 }
295
296 // Load common libraries and set include path
297 if (!LoadCommonLibraries(smode)) {
298 ::Error("AnalysisTrain", "Could not load common libraries");
299 return;
300 }
301
302
303
304 // Make the analysis manager and connect event handlers
305 AliAnalysisManager *mgr = new AliAnalysisManager("PWG4Train", "pwg4 mini train");
306 if (kCommonOutputFileName.Length()>0)mgr->SetCommonFileName(kCommonOutputFileName.Data());
307 if (kProofSaveToAlien) mgr->SetSpecialOutputLocation(kProofOutdir);
308 mgr->SetNSysInfo(0);
309 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
310 if (kUseSysInfo)mgr->SetNSysInfo(kUseSysInfo);
311 mgr->SetSkipTerminate(kSkipTerminate);
312
313 // Load analysis specific libraries
314 if (!LoadAnalysisLibraries(smode)) {
315 ::Error("AnalysisTrain", "Could not load analysis libraries");
316 return;
317 }
318
319 // Create input handler (input container created automatically)
320 if (iAODanalysis) {
321 // AOD input handler
322 AliAODInputHandler *aodH = new AliAODInputHandler();
323 mgr->SetInputEventHandler(aodH);
324 // if (iPWG4JetTasks) aodH->AddFriend(Form("deltas/%s",kDeltaAODJetName.Data()));
325 // if (iPWG4PartCorr) aodH->AddFriend(Form("deltas/%s"kDeltaAODJetName.Data()));
326 } else {
327 // ESD input handler
328 AliESDInputHandler *esdHandler = new AliESDInputHandler();
329 if (kUseESDTags) esdHandler->SetReadTags();
330 esdHandler->SetReadFriends(kFALSE);
331 mgr->SetInputEventHandler(esdHandler);
332 // if(iPWG4PtQATPC&& !kTrainName.Contains("pass5"))esdHandler->SetActiveBranches("ESDfriend");
333
334 }
335
336 // Monte Carlo handler
337 if (kUseMC && !iAODanalysis) {
338 AliMCEventHandler* mcHandler = new AliMCEventHandler();
339 mgr->SetMCtruthEventHandler(mcHandler);
340 mcHandler->SetReadTR(kUseTR);
341 }
342 // AOD output container, created automatically when setting an AOD handler
343 if (iAODhandler) {
344 // AOD output handler
345 AliAODHandler* aodHandler = new AliAODHandler();
346 aodHandler->SetOutputFileName("AliAOD.root");
347 aodHandler->SetFillAODforRun(kFillAOD);
348 //
349 mgr->SetOutputEventHandler(aodHandler);
350 AliAnalysisDataContainer * cout_aod = mgr->GetCommonOutputContainer();
351 cout_aod->SetSpecialOutput();
352 }
353 // Debugging if needed
354
355 if (kUseDebug){
356 mgr->SetDebugLevel(3);
357 }
358 if(kUseSysInfo>0){
359 mgr->RegisterExtraFile("syswatch.root");
360 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
361 kGridMergeExclude += "syswatch.root";
362 }
363 else{
364 AliLog::SetGlobalLogLevel(AliLog::kError);
365 }
366
367
368 //==========================================================================
369 // Create the chain. In this example it is created only from ALIEN files but
370 // can be done to work in batch or grid mode as well.
371 TChain *chain = CreateChain(smode, plugin_mode);
372
373 //==========================================================================
374 // Load the tasks configuration macros for all wagons. These files are supposed now to be
375 // in the current workdir, but in AliEn they will be in the file catalog,
376 // mapped from AliRoot and pecified in the jdl input list.
377
378 // For now connection to top input container and common AOD output container
379 // is done in this macro, but in future these containers will be connected
380 // from each task configuration macro.
381
382 //
383 // Tender and supplies. Needs to be called for every event.
384 //
385
386 if (useTender) {
387 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/TenderSupplies/AddTaskTender.C");
388 AliAnalysisTaskSE *tender = AddTaskTender(kTRUE);
389 // tender->SelectCollisionCandidates();
390 tender->SetDebugLevel(2);
391 }
392
393
394 Float_t fTrackEtaWindow = 0.9;
395 Float_t fJetEtaWindow = 0.5;
396
397 if(kIsPbPb){// for pass1
398 Float_t fTrackEtaWindow = 0.8;
399 Float_t fJetEtaWindow = 0.4;
400 }
401
402 if(iPhysicsSelection && !iAODanalysis){
403 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
404 Int_t iTriggerHIC = 0;
405 Bool_t rejectBkg = true;
406 if(kIsPbPb){
407 iTriggerHIC = 2;
408 rejectBkg = false; // for the moment...
409 }
410 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kIsMC,rejectBkg);
411 iPhysicsSelectionFlag = AliVEvent::kMB;
412 mgr->RegisterExtraFile("EventStat_temp.root");
413 mgr->AddStatisticsTask();
414 }
415
416 if(iCentralitySelection){
417
418 // has to run before AOD filter
419 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskCentrality.C");
420 // const char* file1="$ALICE_ROOT/ANALYSIS/macros/AliCentralityBy1D_137161.root";
421 // const char* file2="$ALICE_ROOT/ANALYSIS/macros/AliCentralityByFunction_137161.root";
422 AliCentralitySelectionTask *taskC = AddTaskCentrality();
423 if (!taskC) ::Warning("AnalysisTrainPWG4Jets", "AliCentralitySelectionTask cannot run for this train conditions - EXCLUDED");
424 }
425
426 if (iESDfilter && !iAODanalysis) {
427 // ESD filter task configuration.
428 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskESDFilterPWG4Train.C");
429 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilter(kUseKinefilter,kUseMuonfilter);
430 taskesdfilter->SetEnableFillAOD(!kFilterAOD);
431
432 if(kIsMC){
433 mgr->RegisterExtraFile("pyxsec_hists.root");
434 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
435 kGridMergeExclude += "pyxsec_hists.root";
436
437 }
438 }
439
440 // AOD tags
441 if (kUseAODTags) {
442 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
443 mgr->AddTask(tagTask);
444 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
445 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
446 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
447 mgr->ConnectOutput(tagTask, 1, coutTags);
448 }
449
450 if (iPWG4FastEmbedding) {
451 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFastEmbedding.C");
452 AliAnalysisTaskFastEmbedding *taskEmbedding = 0;
453 if(kFastEmbAODList.Length()) taskEmbedding = AddTaskFastEmbedding(kFastEmbAODList, 1);
454 else taskEmbedding = AddTaskFastEmbedding(kFastEmbeddingAOD, 0);
455 taskEmbedding->SetJetBranch("jetsAOD_UA104_B0_Filter00256_Cut01000");
456 // taskEmbedding->SetEvtSelecMode(AliAnalysisTaskFastEmbedding::kEventsAll);
457 // taskEmbedding->SetDebugLevel(10);
458 }
459
460 // Jet analysis
461 if (iJETAN) {
462 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJets.C");
463 AliAnalysisTaskJets *taskjets = 0;
464 if(iJETAN&1){
465 /*
466 taskjets = AddTaskJets(kHighPtFilterMask);
467 taskjets->SetName("StandardJets");
468 taskjets->SetNonStdBranch("");
469 */
470 }
471 if(iJETAN&2){
472 // Set only few jet finders backgroudn subtraction w an wo
473
474 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
475 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
476
477 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
478 if(kIsPbPb){
479 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
480 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
481 }
482
483 TString cTmp("");
484
485 // SICONE
486 taskjets = AddTaskJets("AOD","SISCONE",0.4,kHighPtFilterMask,0.15,0); //no background subtraction to be done later....
487 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
488 cTmp = taskjets->GetNonStdBranch();
489 if(cTmp.Length()>0)kJetSubtractBranches += Form("%s ",cTmp.Data());
490
491 if(kUseAODMC){
492 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
493 if(kIsPbPb){
494 taskjets = AddTaskJets("AODMC","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
495 taskjets = AddTaskJets("AODMC2","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
496 }
497 else{
498 taskjets = AddTaskJets("AODMC","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
499 taskjets = AddTaskJets("AODMC2","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
500 }
501 }
502 if(kDeltaAODJetName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJetName.Data());
503 }
504 if (!taskjets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
505 }
506
507
508 if (iPWG4FastEmbedding && iJETAN) {
509 AliAnalysisTaskJets *taskEmbJets = AddTaskJets("AODextra", "FASTJET", 0.4, kHighPtFilterMask);
510 taskEmbJets->ReadAODFromOutput();
511 kJetSubtractBranches_extra += Form("%s ", taskEmbJets->GetNonStdBranch());
512
513 taskEmbJets = AddTaskJets("AODextraonly", "FASTJET", 0.4, kHighPtFilterMask);
514 taskEmbJets->ReadAODFromOutput();
515
516 taskEmbJets = AddTaskJets("AODextra", "UA1", 0.4, kHighPtFilterMask,1.,0);
517 taskEmbJets->ReadAODFromOutput();
518 taskEmbJets = AddTaskJets("AODextraonly", "UA1", 0.4, kHighPtFilterMask,1.,0);
519 taskEmbJets->ReadAODFromOutput();
520 taskEmbJets = AddTaskJets("AODextra", "UA1", 0.4, kHighPtFilterMask,1.,2);
521 taskEmbJets->ReadAODFromOutput();
522 }
523
524 if(iPWG4Cluster){
525 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCluster.C");
526 AliAnalysisTaskJetCluster *taskCl = 0;
527 Float_t fCenUp = 0;
528 Float_t fCenLo = 0;
529 if(kIsPbPb&&!kIsMC){
530 fCenLo = 0;
531 fCenUp = 80;
532 }
533 if(iPWG4Cluster&1){
534
535 if(kIsPbPb){
536 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
537 taskCl->SetBackgroundCalc(kTRUE);
538 taskCl->SetCentralityCut(fCenLo,fCenUp);
539 taskCl->SetGhostEtamax(fTrackEtaWindow);
540 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
541
542 if (iPWG4FastEmbedding) {
543 AliAnalysisTaskJetCluster *taskClEmb = 0;
544 taskClEmb = AddTaskJetCluster("AODextra","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
545 taskClEmb->SetBackgroundCalc(kTRUE);
546 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
547 taskClEmb->SetGhostEtamax(fTrackEtaWindow);
548 kDefaultJetBackgroundBranch_extra = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskClEmb->GetJetOutputBranch());
549
550 taskClEmb = AddTaskJetCluster("AODextraonly","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
551 taskClEmb->SetBackgroundCalc(kFALSE);
552 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
553 taskClEmb->SetGhostEtamax(fTrackEtaWindow);
554
555 taskClEmb = AddTaskJetCluster("AODextra","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow);
556 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
557 taskClEmb->SetBackgroundBranch(kDefaultJetBackgroundBranch_extra.Data());
558 kJetSubtractBranches_extra += Form("%s ",taskClEmb->GetJetOutputBranch());
559
560 taskClEmb = AddTaskJetCluster("AODextraonly","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow);
561 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
562 }
563
564 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.2,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
565 taskCl->SetBackgroundCalc(kTRUE);
566 taskCl->SetCentralityCut(fCenLo,fCenUp);
567 taskCl->SetGhostEtamax(fTrackEtaWindow);
568 }
569 else{
570 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1,kDeltaAODJetName.Data(),0.15); // this one is for the background jets
571 taskCl->SetBackgroundCalc(kTRUE);
572 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
573 taskCl->SetGhostEtamax(fTrackEtaWindow);
574
575 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1,kDeltaAODJetName.Data(),0.15);
576 taskCl->SetBackgroundCalc(kTRUE);
577 taskCl->SetGhostEtamax(fTrackEtaWindow);
578 }
579
580 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,2,1,kDeltaAODJetName.Data(),0.15);
581 taskCl->SetCentralityCut(fCenLo,fCenUp);
582 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
583 taskCl->SetNRandomCones(10);
584 kDefaultJetBranch = taskCl->GetJetOutputBranch();
585 kJetSubtractBranches += Form("%s ",taskCl->GetJetOutputBranch());
586
587
588 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.2,0,1,kDeltaAODJetName.Data(),0.15);
589 taskCl->SetCentralityCut(fCenLo,fCenUp);
590 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
591 kJetSubtractBranches += Form("%s ",taskCl->GetJetOutputBranch());
592
593
594
595 if(kDeltaAODJetName.Length()==0&&kFilterAOD){
596 if(kIsPbPb)taskCl->SetJetTriggerPtCut(40.);
597 else taskCl->SetJetTriggerPtCut(20.);
598 }
599
600 if(kUseAODMC){
601 if(kIsPbPb){
602 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
603 taskCl->SetBackgroundCalc(kTRUE);
604 taskCl->SetGhostEtamax(0.9);
605 kDefaultJetBackgroundBranchMC = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
606
607 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
608 taskCl->SetBackgroundCalc(kTRUE);
609 taskCl->SetGhostEtamax(fTrackEtaWindow);
610 kDefaultJetBackgroundBranchMC2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch(),fTrackEtaWindow);
611 }
612 else{
613 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
614 taskCl->SetBackgroundCalc(kTRUE);
615 taskCl->SetGhostEtamax(fTrackEtaWindow);
616 kDefaultJetBackgroundBranchMC = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
617
618 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
619 taskCl->SetBackgroundCalc(kTRUE);
620 taskCl->SetGhostEtamax(fTrackEtaWindow);
621 kDefaultJetBackgroundBranchMC2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
622 // pp background calcs...
623 }
624
625 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow);
626 taskCl->SetGhostEtamax(fTrackEtaWindow);
627 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC.Data());
628 kDefaultJetBranchMC = taskCl->GetJetOutputBranch();
629
630 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow);
631 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC2.Data());
632 kDefaultJetBranchMC2 = taskCl->GetJetOutputBranch();
633
634 }
635
636
637 if (!taskCl) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCluster cannot run for this train conditions - EXCLUDED");
638 }
639 }
640
641
642 if(iJETSUBTRACT&&kJetSubtractBranches.Length()){
643 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetBackgroundSubtract.C");
644 AliAnalysisTaskJetBackgroundSubtract *taskSubtract = 0;
645 if(kJetSubtractBranches.Length()){
646
647 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches,3,kJetSubtractMask1.Data(),kJetSubtractMask2.Data());
648 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
649 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
650
651 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches,2,kJetSubtractMask1.Data(),kJetSubtractMask2.Data());
652 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data()); taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
653 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
654
655 // taskSubtract->SetDebugLevel(3);
656
657 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches,1,kJetSubtractMask1.Data(),kJetSubtractMask2.Data());
658 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data()); taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
659 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
660
661 if(kJetSubtractBranches.Contains(kDefaultJetBranch.Data())&&kIsPbPb){
662 kDefaultJetBranch.ReplaceAll(taskSubtract->GetToReplace(),Form(taskSubtract->GetReplacementMask(),taskSubtract->GetSubtractionMethod()));
663 }
664 }
665 if(kJetSubtractBranches_extra.Length()){
666 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches_extra,1,kJetSubtractMask1.Data(),kJetSubtractMask2.Data(),"extra");
667 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch_extra.Data());
668 taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
669 //taskSubtract->SetDebugLevel(3);
670 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
671 if(kJetSubtractBranches_extra.Contains(kDefaultJetBranch.Data())){
672 kDefaultJetBranch.ReplaceAll(taskSubtract->GetToReplace(),Form(taskSubtract->GetReplacementMask(),taskSubtract->GetSubtractionMethod()));
673 }
674 }
675 if (!taskSubtract) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetBackgroundSubtrac cannot run for this train conditions - EXCLUDED");
676 }
677
678 if (iDIJETAN) {
679 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskDiJets.C");
680 AliAnalysisTaskDiJets *taskdijets = 0;
681 if(iDIJETAN&1)taskdijets = AddTaskDiJets();
682 if (!taskdijets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
683 if(iDIJETAN&2){
684 taskdijets = AddTaskDiJets("jetsAOD_CDF07");
685 taskdijets = AddTaskDiJets("jetsAOD_DA07");
686 taskdijets = AddTaskDiJets("jetsAOD_FASTJET07");
687 taskdijets = AddTaskDiJets("jetsAOD_FASTKT07");
688 taskdijets = AddTaskDiJets("jetsAOD_SISCONE07");
689 taskdijets = AddTaskDiJets("jetsAOD_UA107");
690 }
691 }
692
693 if(iPWG1QASym){
694 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskQAsym.C");
695 AliAnalysisTaskQASym *taskQASym = AddTaskQAsym(-1);
696 if (!taskQASym) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQASym cannot run for this train conditions - EXCLUDED");
697 }
698
699
700
701 if(iPWG4TmpSourceSara){
702 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskEta.C");
703 AliAnalysisTaskEta *taskEta = AddTaskEta();
704 if (!taskEta) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskEta cannot run for this train conditions - EXCLUDED");
705 }
706
707
708 if(iPWG4JetServices){
709 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetServices.C");
710 AliAnalysisTaskJetServices *taskjetServ = 0;
711 taskjetServ = AddTaskJetServices();
712 if (!taskjetServ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetServices cannot run for this train conditions - EXCLUDED");
713 if(kGridRunRange[0]>0)taskjetServ->SetRunRange(kGridRunRange[0],kGridRunRange[1]);
714 else taskjetServ->SetRunRange(110000,160000);
715 taskjetServ->SetMCData(kIsMC);
716 taskjetServ->SetUsePhysicsSelection((Bool_t)iPhysicsSelection);
717 taskjetServ->SetPhysicsSelectionFlag(iPhysicsSelectionFlag); //
718 taskjetServ->SetNonStdFile(kDeltaAODJetName.Data());
719 if(kIsPbPb){
720 if(kDeltaAODJetName.Length()>0&&kFilterAOD)taskjetServ->SetFilterAODCollisions(kTRUE);
721 // else if(iAODanalysis)taskjetServ->SetFilterAODCollisions(kTRUE);
722
723 taskjetServ->SetZVertexCut(8.);
724 }
725 taskjetServ->SetDebugLevel(3);
726 if(iAODanalysis){
727 // taskjetServ->SetDebugLevel(3);
728 taskjetServ->SetAODInput(kTRUE);
729 }
730 }
731
732if(iPWG4JetSpectrum){
733 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetSpectrum2.C");
734 AliAnalysisTaskJetSpectrum2 *taskjetSpectrum = 0;
735 TString bkgClusters = kDefaultJetBackgroundBranch.Data();
736 bkgClusters.ReplaceAll(Form("%s_",AliAODJetEventBackground::StdBranchName()),"");
737
738 if(iPWG4JetSpectrum&1){
739 if(kIsPbPb){
740 for(int i = 0;i<5;i++){
741 TString tmp(kDefaultJetBranch.Data());
742 // tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),1),kJetSubtractMask1.Data());
743 // tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),1),kJetSubtractMask1.Data());
744 tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),1),Form(kJetSubtractMask1.Data(),0));
745
746 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),tmp.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
747 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
748 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
749
750 // taskjetSpectrum->SetDebugLevel(3);
751 // taskjetSpectrum->SetMinJetPt(10);
752 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
753 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
754 if(iAODanalysis)SetAODInput(taskjetSpectrum);
755
756
757 // check the old subtracted vs. the new subtracted
758 TString tmp2(kDefaultJetBranch.Data());
759 tmp2.ReplaceAll(Form(kJetSubtractMask2.Data(),1),Form(kJetSubtractMask2.Data(),2));
760 taskjetSpectrum = AddTaskJetSpectrum2(tmp2.Data(),kDefaultJetBranch.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
761 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
762 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
763 // taskjetSpectrum->SetDebugLevel(3);
764 // taskjetSpectrum->SetMinJetPt(10);
765 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
766 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
767 if(iAODanalysis)SetAODInput(taskjetSpectrum);
768
769 // check the old subtracted vs. the new subtracted
770 TString tmp3(kDefaultJetBranch.Data());
771 tmp3.ReplaceAll(Form(kJetSubtractMask2.Data(),1),Form(kJetSubtractMask2.Data(),3));
772
773 taskjetSpectrum = AddTaskJetSpectrum2(tmp3.Data(),kDefaultJetBranch.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
774 // taskjetSpectrum->SetDebugLevel(3);
775 // taskjetSpectrum->SetMinJetPt(10);
776 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
777 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
778 taskjetSpectrum->SetTrackEtaWindow(0.8);
779 taskjetSpectrum->SetJetEtaWindow(0.4);
780 if(iAODanalysis)SetAODInput(taskjetSpectrum);
781
782
783 taskjetSpectrum = AddTaskJetSpectrum2(Form("jetsAOD_UA104_B2_Filter%05d_Cut01000",kHighPtFilterMask),kDefaultJetBranch.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
784 // taskjetSpectrum->SetDebugLevel(3);
785 // taskjetSpectrum->SetMinJetPt(10);
786 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
787 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
788 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
789 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
790 if(iAODanalysis)SetAODInput(taskjetSpectrum);
791
792 }
793 }
794 else{ // ! PbPb
795 Int_t i = 0;
796
797 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),
798 "",kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
799
800
801
802 if(kDefaultJetBranchMC.Length()){
803 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),
804 kDefaultJetBranchMC.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
805 // taskjetSpectrum->SetMinJetPt(10);
806 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
807 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
808 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
809 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
810 if(iAODanalysis)SetAODInput(taskjetSpectrum);
811 }
812 if(kDefaultJetBranchMC2.Length()){
813 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),
814 kDefaultJetBranchMC2.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
815 // taskjetSpectrum->SetMinJetPt(10);
816 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
817 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
818 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
819 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
820 if(iAODanalysis)SetAODInput(taskjetSpectrum);
821 }
822
823 /*
824 TString tmp2(kDefaultJetBranch.Data());
825 tmp2.ReplaceAll(Form(kJetSubtractMask2.Data(),0),Form(kJetSubtractMask2.Data(),2));
826 taskjetSpectrum = AddTaskJetSpectrum2(tmp2.Data(),kDefaultJetBranch.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
827 // taskjetSpectrum->SetDebugLevel(3);
828 // taskjetSpectrum->SetMinJetPt(10);
829 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
830 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
831 taskjetSpectrum->SetTrackEtaWindow(0.8);
832 taskjetSpectrum->SetJetEtaWindow(0.4);
833
834 // check the old subtracted vs. the new subtracted
835 TString tmp3(kDefaultJetBranch.Data());
836 tmp3.ReplaceAll(Form(kJetSubtractMask2.Data(),0),Form(kJetSubtractMask2.Data(),3));
837 taskjetSpectrum = AddTaskJetSpectrum2(tmp3.Data(),kDefaultJetBranch.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
838 // taskjetSpectrum->SetDebugLevel(3);
839 // taskjetSpectrum->SetMinJetPt(10);
840 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
841 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
842 taskjetSpectrum->SetTrackEtaWindow(0.8);
843 taskjetSpectrum->SetJetEtaWindow(0.4);
844 if(iAODanalysis)SetAODInput(taskjetSpectrum);
845 */
846 }
847 if (!taskjetSpectrum) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetSpectrum2 cannot run for this train conditions - EXCLUDED");
848 }
849 }
850
851 if(iPWG4Fragmentation){
852 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFragmentationFunction.C");
853 AliAnalysisTaskFragmentationFunction *taskFrag = 0;
854 if(kUseAODMC){
855
856 }
857 else{
858 taskFrag = AddTaskFragmentationFunction(kDefaultJetBranch.Data(),"","","",kHighPtFilterMask);
859 }
860 if (!taskFrag) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskFragmentationFunction cannot run for this train conditions - EXCLUDED");
861 }
862
863 if(iPWG4JetChem){
864 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetChem.C");
865 AliAnalysisTask *taskChem = AddTaskJetChem(kHighPtFilterMask);
866 if (!taskChem) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetChem cannot run for this train conditions - EXCLUDED");
867 }
868
869 if (iPWG4JetResponse) {
870 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetResponse.C");
871 AliAnalysisTask *taskJetResponse = 0;
872
873 if(iJETAN){
874 taskJetResponse = AddTaskJetResponse("jets", "FASTJET", 0.4, kHighPtFilterMask, 0.15, 0);
875 taskJetResponse = AddTaskJetResponse("jets", "FASTJET", 0.4, kHighPtFilterMask, 0.15, 1);
876
877 taskJetResponse = AddTaskJetResponse("jets", "UA1", 0.4, kHighPtFilterMask, 1., 0);
878 taskJetResponse = AddTaskJetResponse("jets", "UA1", 0.4, kHighPtFilterMask, 1., 2);
879 }
880 if(iPWG4Cluster){
881 taskJetResponse = AddTaskJetResponse("clusters", "ANTIKT", 0.4, kHighPtFilterMask, 0.15, 0);
882 taskJetResponse = AddTaskJetResponse("clusters", "ANTIKT", 0.4, kHighPtFilterMask, 0.15, 1);
883 }
884 if (!taskJetResponse) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetResponse cannot run for this train conditions - EXCLUDED");
885
886 }
887
888 if(iPWG4JCORRAN){
889 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJCORRANTask.C");
890 AliJCORRANTask* corran = AddTaskJCORRAN(kDeltaAODJCORRANName.Data(),0);
891 if(!corran)::Warning("AnalysisTrainPWG4Jets", "AliJCORRANTask cannot run for this train conditions - EXCLUDED");
892 else{
893 if(kDeltaAODJCORRANName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJCORRANName.Data());
894 }
895 }
896
897 if(iPWG4UE){
898 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskUE.C");
899 AliAnalysisTaskUE *taskUE = 0;
900 if(iPWG4UE&1)taskUE = AddTaskUE();
901 if(iPWG4UE&2){
902 taskUE =AddTaskUE("jetsAOD_CDF04","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
903 // taskUE =AddTaskUE("jetsAOD_CDF07","CDF", "LJ", "TRANSV","MSP");
904 taskUE =AddTaskUE("jetsAOD_SISCONE04","CDF", "LJ", "TRANSV","MSP");
905 // taskUE =AddTaskUE("jetsAOD_SISCONE07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
906 taskUE =AddTaskUE("jetsAOD_ICDF","CDF","LJ","TRANSV","MSP");
907 taskUE =AddTaskUE("jetsAOD_FASTKT04","CDF", "LJ", "TRANSV","MSP");
908 // taskUE =AddTaskUE("jetsAOD_FASTKT07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
909 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta05", "TRANSV","MSP");
910 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta09", "TRANSV","MSP");
911 }
912
913 if (!taskUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskUE cannot run for this train conditions - EXCLUDED");
914 }
915
916 if(iPWG4LeadingUE){
917 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskLeadingTrackUE.C");
918 AliAnalysisTaskLeadingTrackUE *taskLeadingUE = AddTaskLeadingTrackUE(kUseMC);
919 if (!taskLeadingUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTasLeadingTrackkUE cannot run for this train conditions - EXCLUDED");
920 // taskLeadingUE->SetFilterBit(64);
921 }
922
923
924 if(iPWG4CorrectionsUE){
925 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCorrectionsUE.C");
926 AliAnalysisTaskCorrectionsUE *taskCorrectionsUE = 0;
927 if(iPWG4CorrectionsUE&1)taskCorrectionsUE = AddTaskCorrectionsUE("jetsAOD_NONE","CDF","MP_eta05","TRANSV","MSP",kFALSE);
928 if (!taskCorrectionsUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCorrectionsUE cannot run for this train conditions - EXCLUDED");
929 }
930
931 if(iPWG4ThreeJets){
932 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskThreeJets.C");
933 AliAnalysisTaskThreeJets *taskThree = AddTaskThreeJets();
934 if(!taskThree)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskThreets cannot run for this train conditions - EXCLUDED");
935 }
936 if(iPWG4QGSep){
937 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskQGSep.C");
938 AliAnalysisTaskQGSep *taskQGSep = AddTaskQGSep(kUseMC,iAODanalysis);
939 if(!taskQGSep)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQGSep cannot run for this train conditions - EXCLUDED");
940 }
941
942
943 if(iPWG4Minijet){
944 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskMinijet.C");
945 AliAnalysisTaskMinijet *taskMini = AddTaskMinijet(-1,"esd",kUseMC,kGridDataSet);
946 // if we ha highmult trigger add another task
947 if(!taskMini)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskMinjet cannot run for this train conditions - EXCLUDED");
948 }
949
950
951 if(iPWG4PtQAMC){
952 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQAMC.C");
953 AliPWG4HighPtQAMC *taskQAMC = 0;
954 if(kUseMC){
955 if(iPWG4PtQAMC&1){
956 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),0);
957 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),1);
958 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),2);
959 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),3);
960 }
961 }
962 if (!taskQAMC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQAMC cannot run for this train conditions - EXCLUDED");
963 }
964
965 if(iPWG4PtQATPC){
966 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQATPConly.C");
967 AliPWG4HighPtQATPConly *taskQATPC = 0;
968 if(iPWG4PtQATPC&1)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),1);
969 if(iPWG4PtQATPC&2)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),2);
970
971 if (!taskQATPC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQATPC cannot run for this train conditions - EXCLUDED");
972 }
973
974 if(iPWG4Cosmics){
975 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4CosmicCandidates.C");
976
977 AliPWG4CosmicCandidates *taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(0);
978 taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(1);
979
980 if (!taskPWG4CosmicCandidates) ::Warning("AnalysisTrainPWG4Jets", "AddTaskPWG4CosmicCandidates cannot run for this train conditions - EXCLUDED");
981 }
982
983
984 if(iPWG4PtSpectra){
985 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtSpectra.C");
986 AliPWG4HighPtSpectra *taskPtSpectra = AddTaskPWG4HighPtSpectra(kGridDataSet.Data(),0);
987 taskPtSpectra = AddTaskPWG4HighPtSpectra(kGridDataSet.Data(),1);
988 if (!taskPtSpectra) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskPtSpectra cannot run for this train conditions - EXCLUDED");
989 }
990
991 if(iPWG4KMeans){
992 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskKMeans.C");
993 AliAnalysisTaskKMeans *taskKMeans = AddTaskKMeans();
994 if (!taskKMeans) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskKMenans cannot run for this train conditions - EXCLUDED");
995 }
996
997 if(iPWG4PartCorr){
998 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPartCorr.C");
999 AliAnalysisTaskParticleCorrelation *taskpartcorrPHOS = AddTaskPartCorr("AOD", "PHOS",kFALSE,kIsMC);
1000 if (!taskpartcorrPHOS) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation PHOS cannot run for this train conditions - EXCLUDED");
1001 AliAnalysisTaskParticleCorrelation *taskpartcorrEMCAL = AddTaskPartCorr("AOD", "EMCAL",kFALSE,kIsMC);
1002 if (!taskpartcorrEMCAL) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation EMCAL cannot run for this train conditions - EXCLUDED");
1003 if(kDeltaAODPartCorrName.Length()>0)mgr->RegisterExtraFile(kDeltaAODPartCorrName.Data());
1004 }
1005
1006 if(iPWG4CaloQA){
1007 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/QA/AddTaskCalorimeterQA.C");
1008 AliAnalysisTaskParticleCorrelation *taskcaloQA = AddTaskCalorimeterQA("ESD",kFALSE,kIsMC,kCaloQAOutputFileName.Data());
1009 if(!taskcaloQA)::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation QA cannot run - EXCLUDED");
1010 // if(kCaloQAOutputFileName.Length()>0)mgr->RegisterExtraFile(kCaloQAOutputFileName.Data());
1011 }
1012
1013 if(iPWG4JetCorr){
1014 // using namespace JetCorrelHD;
1015 TString cdir = gSystem->WorkingDirectory();
1016 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
1017 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCorrel.C");
1018 AliAnalysisTaskJetCorrel *taskjetcorr = AddTaskJetCorrel();
1019 gSystem->ChangeDirectory(cdir);
1020 if (!taskjetcorr) ::Warning("AnalysisTrainNew", "AliAnalysisTaskJetCorrel cannot run for this train conditions - EXCLUDED");
1021 }
1022
1023 if(iPWG4Tagged){
1024 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskTaggedPhotons.C");
1025 AliAnalysisTaskTaggedPhotons * taskTagged = AddTaskTaggedPhotons(kFALSE); // EMCAL
1026 taskTagged = AddTaskTaggedPhotons(kTRUE); // PHOS
1027 if (!taskTagged) ::Warning("AnalysisTrainNew", "AliAnalysisTaskTaggedPhotons cannot run for this train conditions - EXCLUDED");
1028 }
1029 if (iPWG4omega3pi) {
1030 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskomega3pi.C");
1031 AliAnalysisTaskOmegaPi0PiPi *taskomega3pi = AddTaskomega3pi();
1032 if (!taskomega3pi) ::Warning("AnalysisTrainNew", "AliAnalysisTaskomega3pi cannot run\
1033 for these train conditions - EXCLUDED");
1034 }
1035
1036 // PWG4 gamma conversion analysis
1037 if (iPWG4GammaConv) {
1038 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskGammaConversion.C");
1039 TString cdir = gSystem->WorkingDirectory();
1040 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
1041 // TString gcArguments = "-run-on-train -run-jet -run-chic -run-neutralmeson -run-cf";
1042 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
1043 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
1044 TString gcArguments = "-run-on-train -run-jet -run-omega-meson -use-own-xyz -run-neutralmeson -no-aod";
1045 // TString kGCAnalysisCutSelectionId="9003562000100310";
1046 // TString kGCAnalysisCutSelectionId="9003562000100312";
1047 // gcArguments.Append(Form(" -set-cut-selection %s ",kGCAnalysisCutSelectionId.Data()));
1048 if(!kIsMC)gcArguments += " -mc-off";
1049 AliAnalysisTaskGammaConversion * taskGammaConversion = AddTaskGammaConversion(gcArguments,mgr->GetCommonInputContainer());
1050 gSystem->ChangeDirectory(cdir);
1051 taskGammaConversion->SelectCollisionCandidates();
1052 if (!taskGammaConversion) ::Warning("AnalysisTrainNew", "AliAnalysisTaskGammaConversion cannot run for these train conditions - EXCLUDED");
1053 }
1054
1055 if (iPWG4CaloConv) {
1056 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCaloConv.C");
1057 AliAnalysisTaskCaloConv * taskCaloConv = AddTaskCaloConv();
1058 if (!taskCaloConv) ::Warning("AnalysisTrainNew", "AliAnalysisTaskCaloConv cannot run for these train conditions - EXCLUDED");
1059 }
1060
1061
1062
1063 //==========================================================================
1064 // FOR THE REST OF THE TASKS THE MACRO AddTaskXXX() is not yet implemented/
1065 // Run the analysis
1066 //
1067 if (kPluginUse) {
1068 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1069 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1070 }
1071
1072 if (mgr->InitAnalysis()) {
1073 mgr->PrintStatus();
1074 // if (kSaveTrain || strlen(config_file)) gSystem->ChangeDirectory(kTrainName);
1075 if (!strcmp(plugin_mode,"submit")&&smode=="GRID"){
1076 TString alien_workdir = gGrid->GetHomeDirectory();
1077 if (iAODanalysis) alien_workdir += "analysisAOD";
1078 else alien_workdir += "analysisESD";
1079 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1080 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1081 printf("=== AnalysisTrainPWG4Jets:: Registering jdl in the work directory alien://%s/%s, should be done by the manager! ===\n",
1082 alien_workdir.Data(),gridhandler->GetGridOutputDir());
1083
1084 TString dest;
1085 dest = Form("%s/%s/%s.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1086 if(AliAnalysisAlien::FileExists(dest.Data())){
1087 Printf("%s exist on grid removing...",dest.Data());
1088 gGrid->Rm(dest.Data());
1089 }
1090 Printf("%s copy ...",dest.Data());
1091 TFile::Cp(Form("file:%s.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
1092
1093
1094 TString dest;
1095 dest = Form("%s/%s/%s_merge.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1096 if(AliAnalysisAlien::FileExists(dest.Data())){
1097 Printf("%s exist on grid removing...",dest.Data());
1098 gGrid->Rm(dest.Data());
1099 }
1100 Printf("%s copy ...",dest.Data());
1101 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
1102
1103 dest = Form("%s/%s/%s_merge_final.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1104 if(AliAnalysisAlien::FileExists(dest.Data())){
1105 Printf("%s exist on grid removing...",dest.Data());
1106 gGrid->Rm(dest.Data());
1107 }
1108 Printf("%s copy ...",dest.Data());
1109 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
1110
1111
1112 /*
1113 dest = Form("%s/rootfiles/STEER/LQ1dRef_v1.root",gGrid->GetHomeDirectory());
1114 if(AliAnalysisAlien::FileExists(dest.Data())){
1115 Printf("%s exist on grid removing...",dest.Data());
1116 gGrid->Rm(dest.Data());
1117 }
1118 TFile::Cp(Form("file:%s/STEER/LQ1dRef_v1.root",
1119 gSystem->ExpandPathName("$ALICE_ROOT")),Form("alien://%s",dest.Data()));
1120 */
1121 }
1122 AliLog::SetGlobalLogLevel(AliLog::kError);
1123 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
1124 TFile * fM = TFile::Open("manager_local.root","RECREATE");
1125 mgr->Write();
1126 fM->Close();
1127 }
1128
1129 // grmpf, aliroot error handler overwrites root
1130 gErrorIgnoreLevel = kErrorIgnoreLevel;
1131 if(gErrorIgnoreLevel>3000) AliLog::SetGlobalLogLevel(AliLog::kFatal);
1132 StartAnalysis(smode, chain);
1133 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
1134 for(int i = 0;i < mgr->GetTopTasks()->GetEntries();i++){
1135 mgr->ProfileTask(i);
1136 }
1137 }
1138 if (!strcmp(plugin_mode, "offline")&&smode=="GRID"){
1139 // Offline mode path files
1140 // PatchJDL();
1141 // PatchAnalysisMacro();
1142 }
1143
1144 if (kSaveTrain && smode=="GRID") {
1145 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1146 TString alien_workdir = gGrid->GetHomeDirectory();
1147 if (iAODanalysis) alien_workdir += "analysisAOD";
1148 else alien_workdir += "analysisESD";
1149 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1150 // kGridOutdir = gridhandler->GetGridOutputDir();
1151 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
1152 alien_workdir.Data());
1153 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data())))
1154 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
1155 if (strcmp(plugin_mode, "test"))
1156 TFile::Cp(Form("file:%sConfig.C",kTrainName.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
1157 }
1158 }
1159}
1160
1161//______________________________________________________________________________
1162void StartAnalysis(const char *mode, TChain *chain) {
1163// Start analysis.
1164 Int_t imode = -1;
1165 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1166 if (!strcmp(mode, "LOCAL")) imode = 0;
1167 if (!strcmp(mode, "PROOF")) imode = 1;
1168 if (!strcmp(mode, "GRID")) imode = 2;
1169 switch (imode) {
1170 case 0:
1171 if (!chain) {
1172 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1173 return;
1174 }
1175 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
1176 return;
1177 case 1:
1178 if (!kProofDataSet.Length()) {
1179 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "kProofDataSet is empty");
1180 return;
1181 }
1182 mgr->StartAnalysis(mode, kProofDataSet, kProofEvents,kProofOffset);
1183 return;
1184 case 2:
1185 if (kPluginUse) {
1186 if (!mgr->GetGridHandler()) {
1187 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Grid plugin not initialized");
1188 return;
1189 }
1190 mgr->StartAnalysis("grid",chain,kNumberOfEvents);
1191 } else {
1192 if (!chain) {
1193 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1194 return;
1195 }
1196 mgr->StartAnalysis(mode, chain);
1197 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
1198 }
1199 return;
1200 }
1201}
1202
1203//______________________________________________________________________________
1204void CheckModuleFlags(const char *mode) {
1205// Checks selected modules and insure compatibility
1206 Int_t imode = -1;
1207 if (!strcmp(mode, "LOCAL")) imode = 0;
1208 if (!strcmp(mode, "PROOF")) imode = 1;
1209 if (!strcmp(mode, "GRID")) imode = 2;
1210
1211
1212 if (kUseCPAR) {
1213 kPluginAliRootVersion = ""; // NO aliroot if we use CPAR
1214 }
1215
1216 if (imode==1) {
1217 if (!kUsePAR) {
1218 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
1219 kUsePAR = kTRUE;
1220 }
1221 }
1222 if (imode != 2) {
1223 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
1224 kPluginUse = kFALSE;
1225 }
1226
1227
1228 if(!kIsMC){
1229 // switch off anthin related to MC
1230 kUseMC = 0;
1231 kUseAODMC = 0;
1232 kUseTR = kFALSE;
1233 }
1234
1235 // Decide if we have PbPb
1236 if(kGridDataSet.CompareTo("LHC10h")==0||kGridDataSet.Contains("LHC10h")) {
1237 Printf("Using settings for Pb+Pb");
1238 kIsPbPb = true;
1239 }
1240
1241
1242
1243 if (iAODanalysis) {
1244 // AOD analysis
1245 if (kUseMC)
1246 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
1247 if (kUseAODTags)
1248 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
1249 kUseMC = kFALSE;
1250 kUseTR = kFALSE;
1251 kUseAODTags = kFALSE;
1252 if (iESDfilter)
1253 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
1254 iESDfilter = 0;
1255 if (iPhysicsSelection)
1256 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "Physics Selection disabled in analysis on AOD's");
1257 iPhysicsSelection = 0;
1258 if (!iAODhandler) {
1259 if (iJETAN)
1260 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
1261 iJETAN = 0;
1262 iDIJETAN = 0;
1263 }
1264 // Disable tasks that do not work yet on AOD data
1265 if(iPWG4JCORRAN)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 JCORRAN disabled in analysis on AOD's");
1266 iPWG4JCORRAN = 0;
1267 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
1268 iPWG4PtQAMC = 0;
1269 if( iPWG4PtQATPC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtTPC disabled in analysis on AOD's");
1270 iPWG4PtQATPC = 0;
1271 if( iPWG4Cosmics)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Comics disabled in analysis on AOD's");
1272 iPWG4Cosmics = 0;
1273
1274 if( iPWG4PtSpectra)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
1275 iPWG4PtSpectra = 0;
1276 if(iPWG4KMeans)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4KMeans disabled on AOD's");
1277 iPWG4KMeans = 0;
1278 if (iPWG4JetCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4Jetcorr disabled on AOD's");
1279 iPWG4JetCorr = 0;
1280 if (iPWG4PartCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
1281 iPWG4PartCorr = 0;
1282 if (iPWG4CaloQA)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4CaloQA disabled on AOD's");
1283 iPWG4CaloQA = 0;
1284 if (iPWG4Tagged)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4tagged disabled on AOD's");
1285 iPWG4Tagged = 0;
1286 if (iPWG4omega3pi)
1287 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
1288 iPWG4omega3pi = 0;
1289 if(iPWG1QASym)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG1 QA Sym disabled in analysis on AOD's");
1290 if (iPWG4GammaConv)::Info("AnalysisPWG4Jets.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's");
1291 iPWG4GammaConv = 0;
1292 iPWG1QASym = 0;
1293 iCentralitySelection = 0;
1294 } else {
1295 // ESD analysis
1296
1297 if(kIsPbPb){
1298 iCentralitySelection = 1;
1299 }
1300
1301 if (!kUseMC){
1302 kUseTR = kFALSE;
1303
1304 if(kUseKinefilter)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Kine Filter disabled in analysis without MC");
1305 kUseKinefilter = kFALSE;
1306 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis without MC");
1307 iPWG4PtQAMC = 0;
1308 if( iPWG4CorrectionsUE)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 CorrectionsUE disabled in analysis without MC");
1309 iPWG4CorrectionsUE = 0;
1310 }
1311 if (!kUseTR) {
1312 if(iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "iPWG4QATPCMC disabled if not reading track references");
1313 iPWG4PtQAMC = 0;
1314 }
1315 if (iJETAN){
1316 iESDfilter=1;
1317 }
1318 if (!iESDfilter){
1319 kUseKinefilter = kFALSE;
1320 kUseMuonfilter = kFALSE;
1321 }
1322 if(!iJETAN){
1323 iPWG4JetSpectrum = iPWG4UE = iPWG4CorrectionsUE = iPWG4ThreeJets = iPWG4QGSep = iDIJETAN = 0;
1324 }
1325 }
1326 iPWG4JetTasks = iPWG4JetServices||iPWG4JetSpectrum||iPWG4UE||iPWG4LeadingUE||iPWG4PtQAMC||iPWG4PtSpectra||iPWG4PtQATPC||iPWG4Cosmics||iPWG4ThreeJets||iPWG4QGSep||iPWG4JetChem||iPWG4Minijet||iPWG4Fragmentation;
1327 iPWG4PartCorrLibs = iPWG4PartCorr||iPWG4Tagged||iPWG4CaloQA;
1328 iPWG4GammaConvLib = iPWG4GammaConv||iPWG4CaloConv;
1329
1330
1331 iEMCUtilLibs = iPWG4PartCorrLibs||iPWG4JCORRAN||iPWG4GammaConvLib;
1332 iJETANLib = iPWG4JetTasks||iJETAN||iDIJETAN;
1333
1334 if (iESDfilter) {iAODhandler=1;}
1335 if (kUseKinefilter && !kUseMC) kUseKinefilter = kFALSE;
1336 if (kUseAODTags && !iAODhandler) kUseAODTags = kFALSE;
1337
1338
1339
1340}
1341
1342//______________________________________________________________________________
1343Bool_t Connect(const char *mode) {
1344// Connect <username> to the back-end system.
1345 Int_t imode = -1;
1346 if (!strcmp(mode, "LOCAL")) imode = 0;
1347 if (!strcmp(mode, "PROOF")) imode = 1;
1348 if (!strcmp(mode, "GRID")) imode = 2;
1349 TString username = gSystem->Getenv("alien_API_USER");
1350 switch (imode) {
1351 case 0:
1352 break;
1353 case 1:
1354 if (!username.Length()) {
1355 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1356 1. Have called: alien-token-init <username>\n \
1357 2. Have called: >source /tmp/gclient_env_$UID");
1358 return kFALSE;
1359 }
1360 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
1361 username.Data(), kProofCluster.Data());
1362 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
1363// TProof::Open(Form("%s@%s:31093", username.Data(), kProofCluster.Data()));
1364 TProof::Open(Form("%s@%s", username.Data(), kProofCluster.Data()));
1365 if (!gProof) {
1366 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
1367 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
1368 return kFALSE;
1369 }
1370 if(kProofClearPackages)gProof->ClearPackages();
1371
1372 if(kProofSaveToAlien){
1373 TGrid::Connect("alien://");
1374 if (gGrid) {
1375 TString homedir = gGrid->GetHomeDirectory();
1376 TString workdir = homedir + kTrainName;
1377 if (!gGrid->Cd(workdir)) {
1378 gGrid->Cd(homedir);
1379 if (gGrid->Mkdir(workdir)) {
1380 gGrid->Cd(kTrainName);
1381 ::Info("AnalysisTrainPWG4Jets::Connect()", "Directory %s created", gGrid->Pwd());
1382 }
1383 }
1384 gGrid->Mkdir("proof_output");
1385 gGrid->Cd("proof_output");
1386 kProofOutdir = Form("alien://%s", gGrid->Pwd());
1387 }
1388 }
1389 break;
1390 case 2:
1391 if (!username.Length()) {
1392 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1393 1. Have called: alien-token-init <username>\n \
1394 2. Have called: >source /tmp/gclient_env_$UID");
1395 return kFALSE;
1396 }
1397 if (kPluginUse && !gSystem->Getenv("alien_CLOSE_SE")) {
1398 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode),
1399 "When using the AliEn plugin it is preferable to define the \
1400 variable alien_CLOSE_SE in your environment.");
1401 return kFALSE;
1402 }
1403 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to AliEn ...",
1404 username.Data());
1405 TGrid::Connect("alien://");
1406 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
1407 break;
1408 default:
1409 ::Error("AnalysisTrainPWG4Jets.C::Connect", "Unknown run mode: %s", mode);
1410 return kFALSE;
1411 }
1412 ::Info("AnalysisTrainPWG4Jets.C::Connect","Connected in %s mode", mode);
1413 return kTRUE;
1414}
1415
1416//______________________________________________________________________________
1417Bool_t LoadCommonLibraries(const char *mode)
1418{
1419 if (!gSystem->Getenv("ALICE_ROOT")) {
1420 ::Error("AnalysisTrainPWG4Jets.C", "Analysis train requires that ALICE_ROOT is set to pick up Configurations");
1421 return kFALSE;
1422 }
1423
1424 // Load common analysis libraries.
1425 Int_t imode = -1;
1426 if (!strcmp(mode, "LOCAL")) imode = 0;
1427 if (!strcmp(mode, "PROOF")) imode = 1;
1428 if (!strcmp(mode, "GRID")) imode = 2;
1429 Bool_t success = kTRUE;
1430 // ROOT libraries
1431 gSystem->Load("libTree.so");
1432 gSystem->Load("libGeom.so");
1433 gSystem->Load("libVMC.so");
1434 gSystem->Load("libPhysics.so");
1435
1436 // Load framework classes. Par option ignored here.
1437 switch (imode) {
1438 case 0:
1439 case 2:
1440 if (kUseCPAR) {
1441 success &= LoadLibrary("STEERBase", mode, kTRUE);
1442 success &= LoadLibrary("ESD", mode, kTRUE);
1443 success &= LoadLibrary("AOD", mode, kTRUE);
1444 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
1445 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
1446 success &= LoadLibrary("ROOTFILES", mode, kTRUE);
1447 // success &= LoadLibrary("EventMixing", mode,kTRUE);
1448 success &= LoadLibrary("CORRFW", mode, kTRUE);
1449 } else {
1450 success &= LoadLibrary("libSTEERBase.so", mode);
1451 success &= LoadLibrary("libESD.so", mode);
1452 success &= LoadLibrary("libAOD.so", mode);
1453 success &= LoadLibrary("libANALYSIS.so", mode);
1454 success &= LoadLibrary("libANALYSISalice.so", mode);
1455 // success &= LoadLibrary("libEventMixing.so", mode);
1456 success &= LoadLibrary("libCORRFW.so", mode);
1457 gROOT->ProcessLine(".include $ALICE_ROOT/include");
1458 }
1459 break;
1460 case 1:
1461 Int_t ires = -1;
1462 if (kProofUseAFPAR && !gSystem->AccessPathName(kProofAFversion)) ires = gProof->UploadPackage(kProofAFversion);
1463 if (ires < 0) {
1464 success &= LoadLibrary("STEERBase", mode);
1465 success &= LoadLibrary("ESD", mode);
1466 success &= LoadLibrary("AOD", mode);
1467 success &= LoadLibrary("ANALYSIS", mode);
1468 success &= LoadLibrary("ANALYSISalice", mode);
1469 success &= LoadLibrary("EventMixing", mode);
1470 success &= LoadLibrary("CORRFW", mode);
1471 } else {
1472 ires = gProof->EnablePackage(kProofAFversion);
1473 if (ires<0) success = kFALSE;
1474 success &= LoadLibrary("CORRFW", mode);
1475 }
1476 break;
1477 default:
1478 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
1479 return kFALSE;
1480 }
1481 if (success) {
1482 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
1483 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
1484 gSystem->GetIncludePath());
1485 } else {
1486 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: FAILED");
1487 }
1488
1489 return success;
1490}
1491
1492//______________________________________________________________________________
1493Bool_t LoadAnalysisLibraries(const char *mode)
1494{
1495// Load common analysis libraries.
1496 Bool_t success = kTRUE;
1497 if (useTender) {
1498 if (!LoadLibrary("TENDER", mode, kTRUE) ||
1499 !LoadLibrary("TENDERSupplies", mode, kTRUE)) return kFALSE;
1500 }
1501 if (iESDfilter) {
1502 /*
1503 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
1504 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
1505 */
1506 }
1507 // JETAN
1508 if (iJETANLib) {
1509 // this part needs some rework in case we do not need the fastjed finders for processing
1510 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
1511 if (!strcmp(mode, "PROOF")){
1512 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libCGAL.so\"\)", kTRUE);
1513 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libfastjet.so\"\)", kTRUE);
1514 // problem when loading siscone copiled with different gcc version??
1515 // gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libsiscone.so\"\)", kTRUE);
1516 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libSISConePlugin.so\"\)", kTRUE);
1517 }
1518 if(!kUsePAR){
1519 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
1520 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
1521 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
1522 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
1523 }
1524 else{
1525 // par files plus FASTJET needs some extra work... need to change
1526 // the loading sequence in the auto generated .C file
1527 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
1528 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
1529 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
1530 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
1531 }
1532 if (!LoadLibrary("FASTJETAN", mode, kTRUE)) return kFALSE;
1533 }
1534 if(iPWG4JetTasks){
1535 if (!LoadLibrary("PWG4JetTasks", mode, kTRUE)) return kFALSE;
1536 }
1537
1538 if(iPWG1QASym){
1539 if (!LoadSource(Form("%s/PWG1/AliAnalysisTaskQASym.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1540 }
1541 if(iPWG4TmpSourceSara){
1542 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
1543 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskEta.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1544 }
1545
1546 if(iEMCUtilLibs){
1547 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
1548 !LoadLibrary("PHOSUtils", mode, kTRUE)) return kFALSE;
1549 }
1550
1551 if (iPWG4PartCorrLibs) {
1552 if (!LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
1553 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
1554 }
1555 if(iPWG4JCORRAN){
1556 // PWG4 particle correlations
1557 if(!LoadLibrary("PWG4JCORRAN",mode,kTRUE))return kFALSE;
1558 }
1559 if (iPWG4JetCorr) {
1560 if (!LoadLibrary("PWG4JetCorrel", mode, kTRUE)) return kFALSE;
1561 }
1562 if (iPWG4omega3pi) {
1563 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
1564 }
1565 if (iPWG4GammaConvLib) {
1566 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
1567 }
1568
1569 ::Info("AnalysisTrainPWG4Jets.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
1570 return kTRUE;
1571}
1572
1573//______________________________________________________________________________
1574Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
1575{
1576// Load a module library in a given mode. Reports success.
1577 Int_t imode = -1;
1578 Int_t result;
1579 TString smodule(module);
1580 if (!strcmp(mode, "LOCAL")) imode = 0;
1581 if (!strcmp(mode, "PROOF")) imode = 1;
1582 if (!strcmp(mode, "GRID")) imode = 2;
1583 TString mod(module);
1584 if (!mod.Length()) {
1585 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Empty module name");
1586 return kFALSE;
1587 }
1588 // If a library is specified, just load it
1589 if (smodule.EndsWith(".so")) {
1590 mod.Remove(mod.Index(".so"));
1591 result = gSystem->Load(mod);
1592 if (result < 0) {
1593 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load library %s", module);
1594 return kFALSE;
1595 }
1596 if (rec) anaLibs += Form("%s.so ",mod.Data());
1597 if (rec) anaLibsExtra += Form("%s.so ",mod.Data());
1598 return kTRUE;
1599 }
1600 // Check if the library is already loaded
1601 if (strlen(gSystem->GetLibraries(Form("%s.so", module), "", kFALSE)) > 0)
1602 return kTRUE;
1603 switch (imode) {
1604 case 0:
1605 case 2:
1606 if (kUsePAR) {
1607 result = SetupPar(module);
1608 if (rec) anaPars += Form("%s.par ", module);
1609 } else {
1610 result = gSystem->Load(Form("lib%s.so", module));
1611 if (rec) anaLibs += Form("lib%s.so ", module);
1612 }
1613 break;
1614 case 1:
1615 if(!gSystem->AccessPathName(module)){
1616 ::Info("AnalysisTrainPWG4Jets.C::LoadLibrary", "Removing directory %s",module);
1617 gSystem->Exec(Form("rm -rf %s",module));
1618 }
1619 result = gProof->UploadPackage(module);
1620 if (result<0) {
1621 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
1622 if (result<0) {
1623 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
1624 return kFALSE;
1625 }
1626 }
1627 result = gProof->EnablePackage(module);
1628 break;
1629 default:
1630 return kFALSE;
1631 }
1632 if (result < 0) {
1633 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load module %s", module);
1634 return kFALSE;
1635 }
1636 return kTRUE;
1637}
1638
1639
1640
1641//______________________________________________________________________________
1642Bool_t LoadSource(const char *source, const char *mode, Bool_t rec=kFALSE)
1643{
1644// Load a module library in a given mode. Reports success.
1645 Int_t imode = -1;
1646 Int_t result = -1;
1647 if (!strcmp(mode, "LOCAL")) imode = 0;
1648 if (!strcmp(mode, "PROOF")) imode = 1;
1649 if (!strcmp(mode, "GRID")) imode = 2;
1650 TString ssource(source);
1651 TString basename = gSystem->BaseName(ssource.Data());
1652 if (!ssource.Length()) {
1653 ::Error("AnalysisTrainPWG4Jets.C::LoadSource", "Empty task name");
1654 return kFALSE;
1655 }
1656 // we have a source code so compile it
1657 if (ssource.EndsWith(".cxx")) {
1658 // need to copy it here other wise the path is also used on grid...
1659 ssource.Remove(ssource.Index(".cxx"));
1660 basename.Remove(basename.Index(".cxx"));
1661 Printf("LoadSources:: Copying... path %s{cxx,h}",ssource.Data());
1662 gSystem->Exec(Form("cp %s.cxx . ",ssource.Data()));
1663 gSystem->Exec(Form("cp %s.h . ",ssource.Data()));
1664 // Path to code
1665 // only needed for local compilation, in grid and proof mode
1666 // the task headers are uploaded
1667 // path.Remove(path.Index(gSystem->BaseName(path.Data())));
1668 // Printf("LoadSources:: Including path %s",path.Data());
1669 // if(path.Length()>0)gROOT->ProcessLine(Form(".include %s",path.Data()));
1670 Printf("LoadSources:: Loading... path %s",basename.Data());
1671 switch (imode) {
1672 case 0:
1673 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
1674 break;
1675 case 1:
1676 result = gProof->LoadMacro(Form("%s.cxx++g",basename.Data()));
1677 break;
1678 case 2:
1679 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
1680 if (rec){
1681 // what we want to compile
1682 anaSources += Form("%s.cxx ",basename.Data());
1683 // what we need as input...
1684 anaLibs += Form("%s.cxx %s.h ",basename.Data(),basename.Data());
1685 }
1686 break;
1687 default:
1688 return kFALSE;
1689 }
1690 }
1691 if (result < 0) {
1692 ::Error("AnalysisTrainPWG4Jets.C::LoadSources", "Could not load source %s", source);
1693 return kFALSE;
1694 }
1695 return kTRUE;
1696}
1697
1698
1699//______________________________________________________________________________
1700TChain *CreateChain(const char *mode, const char *plugin_mode)
1701{
1702// Create the input chain
1703 Int_t imode = -1;
1704 if (!strcmp(mode, "LOCAL")) imode = 0;
1705 if (!strcmp(mode, "PROOF")) imode = 1;
1706 if (!strcmp(mode, "GRID")) imode = 2;
1707 TChain *chain = NULL;
1708 // Local chain
1709 switch (imode) {
1710 case 0:
1711 if (iAODanalysis) {
1712 if (!kLocalXMLDataset.Length()) {
1713 // Local AOD
1714 chain = new TChain("aodTree");
1715 TString line;
1716 ifstream in;
1717 in.open(kLocalDataList.Data());
1718 Int_t ic = 0;
1719 while (in.good()) {
1720 in >> line;
1721 if (line.Length() == 0) continue;
1722 Printf("%d adding %s",ic,line.Data());
1723 chain->Add(line.Data());
1724 ic++;
1725 }
1726 } else {
1727 // Interactive AOD
1728 chain = CreateChainSingle(kLocalXMLDataset, "aodTree");
1729 }
1730 } else {
1731 if (!kLocalXMLDataset.Length()) {
1732 // Local ESD
1733 chain = new TChain("esdTree");
1734 TString line;
1735 ifstream in;
1736 in.open(kLocalDataList.Data());
1737 while (in.good()) {
1738 in >> line;
1739 if (line.Length() == 0) continue;
1740 cout << " line = " << line << endl;
1741 chain->Add(line.Data());
1742 }
1743 } else {
1744 // Interactive ESD
1745 chain = CreateChainSingle(kLocalXMLDataset, "esdTree");
1746 }
1747 }
1748 break;
1749 case 1:
1750 break;
1751 case 2:
1752 if (kPluginUse) {
1753// AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1754// AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1755 } else {
1756 TString treeName = "esdTree";
1757 if (iAODanalysis) treeName = "aodTree";
1758 chain = CreateChainSingle("wn.xml", treeName);
1759 }
1760 break;
1761 default:
1762 }
1763 if (chain && chain->GetNtrees()) return chain;
1764 return NULL;
1765}
1766
1767//______________________________________________________________________________
1768TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
1769{
1770 printf("*******************************\n");
1771 printf("*** Getting the ESD Chain ***\n");
1772 printf("*******************************\n");
1773 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
1774
1775 if (!myCollection) {
1776 ::Error("AnalysisTrainPWG4Jets.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
1777 return NULL ;
1778 }
1779
1780 TChain* chain = new TChain(treeName);
1781 myCollection->Reset() ;
1782 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
1783 chain->ls();
1784 return chain;
1785}
1786
1787//______________________________________________________________________________
1788Int_t SetupPar(char* pararchivename)
1789{
1790 if (!pararchivename || !strlen(pararchivename)) return -1;
1791 char processline[1024];
1792 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
1793 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
1794 ::Info("AnalysisTrainPWG4Jets.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
1795 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
1796 Form("%s.par",pararchivename));
1797 } else {
1798 ::Error("AnalysisTrainPWG4Jets.C::SetupPar", "Cannot find %s.par", pararchivename);
1799 return -1;
1800 }
1801 }
1802 if (kPluginUse && kSaveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, kTrainName.Data()));
1803 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
1804
1805 TString ocwd = gSystem->WorkingDirectory();
1806 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
1807
1808 // check for BUILD.sh and execute
1809 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
1810 printf("*******************************\n");
1811 printf("*** Building PAR archive ***\n");
1812 printf("*******************************\n");
1813 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
1814 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
1815 return -1;
1816 }
1817 }
1818
1819 // check for SETUP.C and execute
1820 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
1821 printf("*******************************\n");
1822 printf("*** Setup PAR archive ***\n");
1823 printf("*******************************\n");
1824 gROOT->Macro("PROOF-INF/SETUP.C");
1825 }
1826 if (!gSystem->ChangeDirectory(ocwd.Data())){
1827 Error("Change back directory",Form("Cannot change to %s",ocwd.Data()));
1828 return -1;
1829 }
1830 return 0;
1831}
1832
1833//______________________________________________________________________________
1834AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
1835{
1836// Check if user has a valid token, otherwise make one. This has limitations.
1837// One can always follow the standard procedure of calling alien-token-init then
1838// source /tmp/gclient_env_$UID in the current shell.
1839// if (!AliAnalysisGrid::CreateToken()) return NULL;
1840 AliAnalysisAlien *plugin = new AliAnalysisAlien();
1841// Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
1842 plugin->SetRunMode(plugin_mode);
1843 if (kPluginUseProductionMode) plugin->SetProductionMode();
1844 plugin->SetJobTag(kJobTag);
1845 plugin->SetNtestFiles(1);
1846// plugin->SetPreferedSE("ALICE::NIHAM::File");
1847// Set versions of used packages
1848 plugin->SetAPIVersion("V1.1x");
1849 // plugin->SetAPIVersion("V1.0x");
1850// plugin->SetAPIVersion("V2.4");
1851 plugin->SetROOTVersion(kPluginRootVersion);
1852 plugin->SetAliROOTVersion(kPluginAliRootVersion);
1853// Declare input data to be processed.
1854// Method 1: Create automatically XML collections using alien 'find' command.
1855// Define production directory LFN
1856 plugin->SetGridDataDir(kGridDatadir.Data());
1857// Set data search pattern
1858 if (iAODanalysis) plugin->SetDataPattern(" *AliAOD.Jets.root");
1859 // else plugin->SetDataPattern(Form(" %s/*/*ESD.tag.root",kGridPassPattern.Data()));
1860 else plugin->SetDataPattern(Form(" %s/*/*AliESDs.root",kGridPassPattern.Data()));
1861// ...then add run numbers to be considered
1862// plugin->SetRunRange(kGridRunRange[0], kGridRunRange[1]);
1863 for (Int_t i=kGridRunRange[0]; i<=kGridRunRange[1]; i++) {
1864 Printf("AnalysisTrainPWG4Jets Adding run number %s", Form(kGridRunPattern.Data(),i));
1865 plugin->AddRunNumber(Form(kGridRunPattern.Data(),i));
1866 }
1867
1868 if(kGridLocalRunList.Length()>0){
1869 ifstream in1;
1870 in1.open(kGridLocalRunList.Data());
1871 int iRun;
1872 int icount = 0;
1873 /*
1874 char c;
1875 char cLine[250];
1876 while(!in1.eof()){
1877 c = in1.get();
1878 if ( (c >= '0') && (c <= '9') )
1879 {
1880 in1.putback (c)s;
1881 in1>>iRun;
1882 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1883 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1884 }
1885 else
1886 {
1887 in1.putback (c);
1888 in1.getline(cLine,250);
1889
1890 }
1891 }
1892 */
1893
1894 Int_t nRun = 0;
1895
1896 // just use run numbers, negatives will be excluded
1897 while(in1>>iRun){
1898 if(iRun>=0){
1899 if(iRun>=0&&nRun>=kGridOffsetRunFromList&&(nRun<kGridMaxRunsFromList)){
1900 Printf("AnalysisTrainPWG4Jets Adding run number from File %d: %s",nRun,Form(kGridRunPattern.Data(),iRun));
1901 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1902
1903 }
1904 else{
1905 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d: %d",nRun, iRun);
1906 }
1907 nRun++;
1908 }
1909 else{
1910 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d: %d",nRun, iRun);
1911 }
1912 }
1913 }
1914
1915// Method 2: Declare existing data files (raw collections, xml collections, root file)
1916// If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
1917// XML collections added via this method can be combined with the first method if
1918// the content is compatible (using or not tags)
1919// plugin->AddDataFile("tag.xml");
1920// plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
1921// Define alien work directory where all files will be copied. Relative to alien $HOME.
1922 TString alien_workdir = "";
1923
1924 if (iAODanalysis) alien_workdir += "analysisAOD";
1925 else alien_workdir += "analysisESD";
1926 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1927 plugin->SetGridWorkingDir(alien_workdir.Data());
1928
1929 // Declare alien output directory. Relative to working directory.
1930 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1931 plugin->SetGridOutputDir(kGridOutdir);
1932
1933 // Add external packages
1934 if (iJETAN||iDIJETAN) {
1935 plugin->AddExternalPackage("boost::v1_43_0");
1936 plugin->AddExternalPackage("cgal::v3.6");
1937 plugin->AddExternalPackage("fastjet::v2.4.2");
1938 }
1939
1940
1941 // set extra libs before par file compilation
1942 anaLibs += kGridExtraFiles;
1943 anaLibs = anaLibs.Strip();
1944 Printf("anaLibs %s",anaLibs.Data());
1945 Printf("anaLibsExtra %s",anaLibsExtra.Data());
1946
1947 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs.Data());
1948 if (anaLibsExtra.Length()) plugin->SetAdditionalRootLibs(anaLibsExtra.Data());
1949
1950 TString ana_sources = "";
1951 TString ana_add = "";
1952 if (kUsePAR && anaPars.Length()) {
1953 printf("%s\n", anaPars.Data());
1954 TObjArray *arr;
1955 TObjString *objstr;
1956 arr = anaPars.Tokenize(" ");
1957 TIter next(arr);
1958 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
1959 delete arr;
1960 }
1961
1962// Declare the analysis source files names separated by blancs. To be compiled runtime
1963// using ACLiC on the worker nodes.
1964 ana_sources = anaSources.Strip();
1965// Declare all libraries (other than the default ones for the framework. These will be
1966// loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
1967
1968 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
1969 plugin->SetExecutableCommand(kPluginExecutableCommand.Data());
1970 // Declare the output file names separated by blancs.
1971 // (can be like: file.root or file.root@ALICE::Niham::File)
1972 plugin->SetMergeExcludes(kGridMergeExclude);
1973 plugin->SetMaxMergeFiles(kGridMaxMergeFiles);
1974 plugin->SetNrunsPerMaster(kGridRunsPerMaster);
1975 plugin->SetMergeViaJDL(kPluginMergeViaJDL);
1976 // Use fastread option
1977 plugin->SetFastReadOption(kPluginFastReadOption);
1978 // UseOverwrite mode
1979 plugin->SetOverwriteMode(kPluginOverwriteMode);
1980 // Optionally define the files to be archived.
1981 // plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
1982 plugin->SetOutputToRunNo(kPluginOutputToRunNumber); // write the output to subdirs named after run number
1983
1984 // Put default output files to archive
1985 TString listhists = "";
1986 TString listaods = "";
1987 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1988 TIter next(mgr->GetOutputs());
1989 AliAnalysisDataContainer *output;
1990 while ((output=(AliAnalysisDataContainer*)next())) {
1991 const char *filename = output->GetFileName();
1992 if (!(strcmp(filename, "default"))) {
1993 if (!mgr->GetOutputEventHandler()) continue;
1994 filename = mgr->GetOutputEventHandler()->GetOutputFileName();
1995 if (listaods.Length()) listaods += " ";
1996 listaods += filename;
1997 } else {
1998 if(!listhists.Contains(filename)){
1999 if (listhists.Length()) listhists += " ";
2000 listhists += filename;
2001 }
2002 }
2003 }
2004
2005 if (mgr->GetExtraFiles().Length()) {
2006 if (listaods.Length()) listaods += " ";
2007 listaods += mgr->GetExtraFiles();
2008 }
2009
2010 // if we do not fill the aod we do not need to store it
2011 // kGridMergeExclude = listaods;
2012
2013 if(kSaveAOD>=0){
2014 TString outputFiles = "";
2015 outputFiles += mgr->GetExtraFiles();
2016 if (listhists.Length()) outputFiles += " ";
2017 outputFiles += listhists;
2018 plugin->SetDefaultOutputs(kFALSE);
2019 Printf("%s:%d Starting with the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
2020 // remove
2021 // no harm done when we try to remove something that is not there :)
2022 if(!(kSaveAOD&(1<<0))){
2023 outputFiles.ReplaceAll("AliAOD.root ","");
2024 listaods.ReplaceAll("AliAOD.root ","");
2025 }
2026 if(!(kSaveAOD&(1<<1))){
2027 if(kDeltaAODJetName.Length())outputFiles.ReplaceAll(kDeltaAODJetName.Data(),"");
2028 if(kDeltaAODJetName.Length())listaods.ReplaceAll(kDeltaAODJetName.Data(),"");
2029
2030 }
2031 if(!(kSaveAOD&(1<<2))){
2032 if(kDeltaAODPartCorrName.Length())outputFiles.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
2033 if(kDeltaAODPartCorrName.Length())listaods.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
2034 }
2035 if(!(kSaveAOD&(1<<3))){
2036 if(kDeltaAODJCORRANName.Length())outputFiles.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
2037 if(kDeltaAODJCORRANName.Length())listaods.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
2038 }
2039
2040 //
2041 plugin->SetDefaultOutputs(kFALSE);
2042 Printf("%s:%d Saving the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
2043 plugin->SetOutputFiles(outputFiles.Data());
2044 }
2045
2046 TString outputArchive;
2047 outputArchive = Form("log_archive.zip:std*@%s","disk=1");
2048 listaods.ReplaceAll(" ", ",");
2049 listhists.ReplaceAll(" ", ",");
2050 if (listhists.Length()){
2051 outputArchive += " ";
2052 outputArchive += "root_archive.zip:";
2053 outputArchive += listhists;
2054 if (listaods.Length()){
2055 outputArchive += ",";
2056 outputArchive += listaods;
2057 }
2058 outputArchive += Form("@%s", kGridOutputStorages.Data());
2059 }
2060 else{
2061
2062 if (listaods.Length()){
2063 // we have only aod'ish output
2064 outputArchive += " ";
2065 outputArchive += "root_archive.zip:";
2066 outputArchive += listaods;
2067 outputArchive += Form("@%s", kGridOutputStorages.Data());
2068 }
2069 else{
2070 // no other outputs than std..
2071 ::Fatal("AnalysisTrainPWG4Jets", "No task output !");
2072 }
2073 }
2074
2075 plugin->SetDefaultOutputs(kFALSE);
2076 plugin->SetOutputArchive(outputArchive);
2077
2078
2079 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
2080 plugin->SetAnalysisMacro(Form("%s.C", kTrainName.Data()));
2081 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
2082 plugin->SetSplitMaxInputFileNumber(kGridFilesPerJob);
2083 // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
2084 // plugin->SetMaxInitFailed(5);
2085 // Optionally resubmit threshold.
2086 // plugin->SetMasterResubmitThreshold(90);
2087 // Optionally set time to live (default 30000 sec)
2088 plugin->SetTTL(54000); // 15h...
2089 // Optionally set input format (default xml-single)
2090 plugin->SetInputFormat("xml-single");
2091 // Optionally modify the name of the generated JDL (default analysis.jdl)
2092 plugin->SetJDLName(Form("%s.jdl", kTrainName.Data()));
2093 // Optionally modify the executable name (default analysis.sh)
2094 plugin->SetExecutable(Form("%s.sh", kTrainName.Data()));
2095 // Optionally modify job price (default 1)
2096 plugin->SetPrice(1);
2097 // Optionally modify split mode (default 'se')
2098 plugin->SetSplitMode("se");
2099 return plugin;
2100}
2101
2102//______________________________________________________________________________
2103void WriteConfig()
2104{
2105// Write train configuration in a file. The file name has the format:
2106// train_[trainName]_ddMonthyyyy_time.C
2107 if (kUseDate) {
2108 gSystem->Exec("date +%d%b%Y_%Hh%M > date.tmp");
2109 ifstream fdate("date.tmp");
2110 if (!fdate.is_open()) {
2111 ::Error("AnalysisTrainPWG4Jets.C::Export","Could not generate file name");
2112 return;
2113 }
2114 const char date[64];
2115 fdate.getline(date,64);
2116 fdate.close();
2117 gSystem->Exec("rm date.tmp");
2118 kTrainName = Form("train_%s_%s", kTrainName.Data(), date);
2119 } else {
2120 kTrainName = Form("train_%s", kTrainName.Data());
2121 }
2122 TString cdir = gSystem->WorkingDirectory();
2123 gSystem->MakeDirectory(kTrainName);
2124 gSystem->ChangeDirectory(kTrainName);
2125 ofstream out;
2126 out.open(Form("%sConfig.C",kTrainName.Data()), ios::out);
2127 if (out.bad()) {
2128 ::Error("AnalysisTrainPWG4Jets.C::Export", "Cannot open ConfigTrain.C for writing");
2129 return;
2130 }
2131 out << "{" << endl;
2132 out << " kTrainName = " << "\"" << kTrainName.Data() << "\";" << endl;
2133 out << " kProofCluster = " << "\"" << kProofCluster.Data() << "\";" << endl;
2134 out << " kProofUseAFPAR = " << kProofUseAFPAR << ";" << endl;
2135 if (kProofUseAFPAR)
2136 out << " kProofAFversion = " << kProofAFversion.Data() << ";" << endl;
2137 out << " kProofDataSet = " << "\"" << kProofDataSet.Data() << "\";" << endl;
2138 out << " kPluginUse = " << kPluginUse << ";" << endl;
2139 out << " kUsePAR = " << kUsePAR << ";" << endl;
2140 out << " kUseCPAR = " << kUseCPAR << ";" << endl;
2141 out << " kPluginRootVersion = " << "\"" << kPluginRootVersion.Data() << "\";" << endl;
2142 out << " kPluginAliRootVersion = " << "\"" << kPluginAliRootVersion.Data() << "\";" << endl;
2143 out << " kGridDatadir = " << "\"" << kGridDatadir.Data() << "\";" << endl;
2144 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
2145 out << " kGridOutdir = " << "\"" << kGridOutdir.Data() << "\";" << endl;
2146 out << " kGridMaxMergeFiles = " << kGridMaxMergeFiles << ";" << endl;
2147 out << " kGridMergeExclude = " << "\"" << kGridMergeExclude.Data() << "\";" << endl;
2148 out << " kGridRunsPerMaster = " << kGridRunsPerMaster << ";" << endl;
2149 out << " kGridFilesPerJob = " << kGridFilesPerJob << ";" << endl;
2150 out << " kGridRunRange[0] = " << kGridRunRange[0] << ";" << endl;
2151 out << " kGridRunRange[1] = " << kGridRunRange[1] << ";" << endl;
2152 out << " kUseDebug = " << kUseDebug << ";" << endl;
2153 out << " kUseMC = " << kUseMC << ";" << endl;
2154 out << " kUseESDTags = " << kUseESDTags << ";" << endl;
2155 out << " kUseKinefilter = " << kUseKinefilter << ";" << endl;
2156 out << " kUseTR = " << kUseTR << ";" << endl;
2157 out << " kUseAODTags = " << kUseAODTags << ";" << endl;
2158 out << " kSaveTrain = " << "kFALSE;" << endl << endl;
2159 out << " // Analysis modules" << endl;
2160 out << " iAODanalysis = " << iAODanalysis << ";" << endl;
2161 out << " iAODhandler = " << iAODhandler << ";" << endl;
2162 out << " iESDfilter = " << iESDfilter << ";" << endl;
2163 out << " iJETAN = " << iJETAN << ";" << endl;
2164 out << "// Configuration fot the wagons" << endl;
2165 out << "}" << endl;
2166 ::Info("AnalysisTrainPWG4Jets.C::WriteConfig", "Train configuration wrote to file %s", Form("config_%s.C", kTrainName.Data()));
2167 gSystem->ChangeDirectory(cdir);
2168}
2169
2170//______________________________________________________________________________
2171Bool_t LoadConfig(const char *filename)
2172{
2173// Read train configuration from file
2174 if (gSystem->AccessPathName(filename)) {
2175 ::Error("AnalysisTrainPWG4Jets.C::LoadConfig", "Config file name not found");
2176 return kFALSE;
2177 }
2178 gROOT->ProcessLine(Form(".x %s", filename));
2179 ::Info("AnalysisTrainPWG4Jets.C::LoadConfig", "Train configuration loaded from file %s", filename);
2180 return kTRUE;
2181}
2182
2183Bool_t PatchJDL(){
2184 Printf(">>> Patching JDL");
2185 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
2186 AliAnalysisAlien* gridHandler = (AliAnalysisAlien*)mgr->GetGridHandler();
2187 TGridJDL *jdl = gridHandler->GetGridJDL();
2188 if(iJETAN)jdl->AddToPackages("fastjet","v2.4.0");
2189 gridHandler->WriteJDL(kFALSE);
2190 Printf("<<< Patching JDL");
2191 return kTRUE;
2192}
2193
2194Bool_t PatchAnalysisMacro(){
2195 Printf(">>> Patching AnalysisMacro");
2196 gSystem->Exec(Form("mv %s.C %s.C_tmp",kTrainName.Data(),kTrainName.Data()));
2197
2198 ifstream in1;
2199 in1.open(Form("%s.C_tmp", kTrainName.Data()));
2200 char cLine[250];
2201 TString st;
2202 while(in1.getline(cLine,250)){
2203 st += cLine;
2204 st += "\n";
2205 }
2206 Int_t index= -1;
2207 index = st.Index("gSystem->Load(\"libPhysics\");");
2208 index += strlen("gSystem->Load(\"libPhysics\");");
2209 /*
2210 TObjArray *arr;
2211 TObjString *objstr;
2212 arr = anaLibs.Tokenize(" ");
2213 TIter next(arr);
2214
2215 add += "\n\n // added by CKB \n";
2216 while ((objstr=(TObjString*)next())){
2217 if(objstr->GetString().Contains("PWG3"))continue;
2218 if(objstr->GetString().EndsWith(".so"))add += Form("gSystem->Load(\"%s\");\n",objstr->GetString().Data());
2219 }
2220 delete arr;
2221 */
2222 // add += Form("AliLog::SetGlobalLogLevel(%d);\n",AliLog::GetGlobalLogLevel());
2223 TString add = "";
2224
2225 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2226 add += "\n\n // added by CKB \n";
2227 if(kErrorIgnoreLevel>0)add += Form("gErrorIgnoreLevel = %d;\n",kErrorIgnoreLevel);
2228 add += "\n gSystem->AddIncludePath(\"./\"); \n";
2229 add += "\n gSystem->SetFPEMask(); \n";
2230
2231
2232 if(gGrid&&kPluginAliRootVersion.Length()==0){
2233 /*
2234 add += "\n // Dirty hack for TRD reference data \n";
2235 add += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2236 add += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2237 add += "\"); \n";
2238 */
2239 }
2240
2241 add += "// BKC \n\n";
2242 st.Insert(index,add.Data());
2243
2244 if(kUseDebug){
2245 // st.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
2246 }
2247
2248 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
2249 index = st.Index("gSystem->AddIncludePath(\"-I$"); // uncommen $ALICE_ROOT include for par files
2250 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2251 st.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2252 }
2253
2254 if(AliLog::GetGlobalLogLevel()==AliLog::kFatal){
2255 index = st.Index("AliLog::SetGlobal"); // ncomment setting of log level, do my own
2256 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2257 st.Insert(index,"AliLog::SetGlobalLogLevel(AliLog::kFatal);// CKB \n // CKB comment out for own setting \n //");
2258 }
2259
2260 ofstream out;
2261 out.open(Form("%s.C", kTrainName.Data()));
2262 if (out.bad()) {
2263 return kFALSE;
2264 }
2265 out << st << endl;
2266 Printf("<<< Patching AnalysisMacro");
2267
2268
2269
2270
2271
2272 Printf(">>> Patching Merge Macro");
2273 gSystem->Exec(Form("mv %s_merge.C %s_merge.C_tmp",kTrainName.Data(),kTrainName.Data()));
2274
2275 ifstream in2;
2276 in2.open(Form("%s_merge.C_tmp", kTrainName.Data()));
2277 TString st2;
2278 while(in2.getline(cLine,250)){
2279 st2 += cLine;
2280 st2 += "\n";
2281 }
2282 index = st2.Index("gSystem->Load(\"libPhysics\");");
2283 index += strlen("gSystem->Load(\"libPhysics\");");
2284 TString add2 = "";
2285 add2 += "\n gSystem->AddIncludePath(\"./\"); \n";
2286 if(gGrid&&kPluginAliRootVersion.Length()==0){
2287 /*
2288 add2 += "\n // Dirty hack for TRD reference data \n";
2289 add2 += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2290 add2 += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2291 add2 += "\"); \n";
2292 */
2293 }
2294 add2 += "// BKC \n\n";
2295 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2296 st2.Insert(index,add.Data());
2297
2298
2299 if(kUseDebug){
2300 // st2.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
2301 }
2302
2303 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
2304 index = st2.Index("gSystem->AddIncludePath(\"-I$"); // uncomment $ALICE_ROOT include for par files
2305 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2306 st2.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2307 }
2308
2309 // do not exclude the extra files from merign, this is done explicitly in this train script
2310 // index = st2.Index("mergeExcludes +="); // uncommen $ALICE_ROOT include for par files
2311 // if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2312 // st2.Insert(index,"// CKB comment out, handled explicitly by the train macro \n //");
2313
2314
2315 ofstream out2;
2316 out2.open(Form("%s_merge.C", kTrainName.Data()));
2317 if (out2.bad()) {
2318 return kFALSE;
2319 }
2320 out2 << st2 << endl;
2321 Printf("<<< Patching Merging Macro");
2322
2323
2324
2325 return kTRUE;
2326
2327}