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1//===================== ANALYSIS TRAIN =========================================
2// To use: copy this macro to your work directory, modify the global part to match
3// your needs, then run root.
4// root[0] .L AnalysisTrain.C
5// Grid full mode as below (other modes: test, offline, submit, terminate)
6// root[1] AnalysisTrainPWG-244Jets("grid", "full")
7// CAF mode (requires root v5-23-02 + aliroot v4-16-Rev08)
8// root[2] AnalysisTrainPWG4Jets("proof")
9// Local mode requires AliESds.root or AliAOD.root in ./data directory
10// root[3] AnalysisTrainPWG4Jets("local")
11// In proof and grid modes, a token is needed and sourcing the produced environment file.
12//
13// If 'saveTrain' flag is set, the train will generate a directory name and run
14// in this directory. A configuration file 'ConfigTrain.C' will be generated.
15// One can replay at any time the train via:
16// root[1] AnalysisTrainPWG4Jets(ana_mode, plugin_mode, "train_default_<date>/ConfigTrain.C")
17
18// For Usage with fastjet run in "offline" first and then "submit"
19// jdl and analysismacro are automatically patched after "offline" mode
20
21// =============================================================================
22// ### General Steering variables
23// =============================================================================
24//== general setup variables
25TString kTrainName = "testAnalysis"; // *CHANGE ME* (no blancs or special characters)
26TString kJobTag = "PWG4 Jet Tasks analysis train configured"; // *CHANGE ME*
27
28// Usage of par files ONLY in grid mode and ONLY if the code is not available
29// in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
30// To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
31// AliRoot.
32Bool_t kUsePAR = kFALSE; // use par files for extra libs
33Bool_t kUseCPAR = kFALSE; // use par files for common libs
34Bool_t kFillAOD = kFALSE; // switch of AOD filling for on the fly analysis
35Bool_t kFilterAOD = kTRUE;
36Int_t kSaveAOD = 8; // Bit switch 1 = Full AOD 2 = Jet AOD , 4 = PartCorr, 8 = JCORRAN
37//== general input and output variables
38
39Int_t iAODanalysis = 1; // Analysis on input AOD's
40Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
41Int_t iCentralitySelection = 0; // Use the centrality
42Int_t iESDfilter = 0; // ESD to AOD filter (barrel + muon tracks)
43Int_t iPhysicsSelection = 1; // ESD to AOD filter (barrel + muon tracks)
44UInt_t iPhysicsSelectionFlag = 1; // set by pyshics selection and passed to the task, kMB, kUserDefined etc
45Bool_t useTender = kFALSE; // use tender wagon
46Bool_t kUseKinefilter = kFALSE; // use Kinematics filter
47Bool_t kUseMuonfilter = kFALSE; // use Kinematics filter
48TString kCommonOutputFileName = "PWG4_JetTasksOutput.root";
49TString kCaloQAOutputFileName = "PWG4_CaloQAOutput.root";
50
51
52//== general process variables
53
54// ### Other flags to steer the analysis
55//==============================================================================
56Bool_t kSkipTerminate = kTRUE; // Do not call Teminate
57Bool_t kUseDate = kFALSE; // use date in train name
58Bool_t kUseDebug = kTRUE; // activate debugging
59Int_t kErrorIgnoreLevel = -1; // takes the errror print level from .rootrc
60// From TError.h:
61// const Int_t kUnset = -1;
62// const Int_t kPrint = 0;
63// const Int_t kInfo = 1000;
64// const Int_t kWarning = 2000;
65// const Int_t kError = 3000;
66// const Int_t kBreak = 4000;
67// const Int_t kSysError = 5000;
68// const Int_t kFatal = 6000;
69Int_t kUseSysInfo = 0; // activate debugging
70Long64_t kNumberOfEvents = 1234567890; // number of events to process from the chain
71Bool_t kUseMC = kTRUE; // use MC info
72Bool_t kIsMC = kTRUE; // is MC info, if false it overwrites Use(AOD)MC
73Bool_t kUseAODMC = kTRUE; // use MC infA
74Bool_t kUseESDTags = kFALSE; // use ESD tags for selection
75Bool_t kUseTR = kFALSE; // use track references
76Bool_t kUseAODTags = kFALSE; // use AOD tags
77Bool_t kSaveTrain = kFALSE; // save train configuration as:
78Bool_t kIsPbPb = kFALSE; // Pb+Pb
79
80
81// ### Analysis modules to be included. Some may not be yet fully implemented.
82//==============================================================================
83Int_t iJETAN = 1; // Jet analysis (PWG4) // 1 write standard 2 write non-standard jets, 3 wrtie both
84Int_t iJETSUBTRACT = 1; // Jet background subtration
85TString kDefaultJetBranch = ""; // is currently set when filled (iJETAN or clusters) or from config macro
86TString kDefaultJetBackgroundBranch = ""; // is currently set when filled (jet clsuters
87TString kDefaultJetBackgroundBranch_extra = ""; // is currently set when filled (jet clsuters)
88TString kJetSubtractBranches = ""; // is currently set when filled (jet clsuters
89TString kJetSubtractBranches_extra = ""; // is currently set when filled (jet clsuters
90
91TString kDefaultJetBranchMC = ""; // is currently set when filled (iJETAN or clusters) or from config macro
92TString kDefaultJetBackgroundBranchMC = ""; // is currently set when filled (jet clsuters
93TString kDefaultJetBranchMC2 = ""; // is currently set when filled (iJETAN or clusters) or from config macro
94TString kDefaultJetBackgroundBranchMC2 = ""; // is currently set when filled (jet clsuters
95TString kJetSubtractMask1 = "B0";
96TString kJetSubtractMask2 = "B%d";
97Int_t iDIJETAN = 1;
98Int_t iJETANLib = 1;
99Int_t iPWG1QASym = 0; // Eva's QA task compiled on the fly...
100Int_t iPWG4FastEmbedding = 0; // Generate non-standard AOD for embedding
101Int_t iPWG4JetTasks = 0; // all jet tasks flag for lib laoding
102Int_t iPWG4JetServices = 0; // jet spectrum analysis
103Int_t iPWG4JetSpectrum = 0; // jet spectrum analysis
104Int_t iPWG4JetResponse = 0; // jet response matrix
105Int_t iPWG4JCORRAN = 0; // JCORRAN module
106Int_t iPWG4UE = 0; // Underlying Event analysis
107Int_t iPWG4LeadingUE = 0; // Underlying Event analysis
108Int_t iPWG4CorrectionsUE = 0; // Underlying Event analysis
109Int_t iPWG4TmpSourceSara = 0; // Underlying Event analysis not in svn
110Int_t iPWG4Fragmentation = 0; // Official Fragmentation
111Int_t iPWG4JetChem = 0; // Jet chemistry
112Int_t iPWG4PtQAMC = 0; // Marta's QA tasks
113Int_t iPWG4PtSpectra = 0; // Marta's QA tasks
114Int_t iPWG4PtQATPC = 0; // Marta's QA tasks
115Int_t iPWG4Cosmics = 0; // Marta's Cosmics Taks
116Int_t iPWG4ThreeJets = 0; // Sona's thrust task
117Int_t iPWG4QGSep = 0; // Sona's QG Separation task
118Int_t iPWG4Minijet = 0; // Eva's Mini Jet Task cluster task
119Int_t iPWG4KMeans = 0; // Andreas' KMeans task
120Int_t iPWG4Cluster = 0; // CKB cluster task
121Int_t iEMCUtilLibs = 0; // Flag to satisfy dependence on EMC utils
122Int_t iPWG4PartCorrLibs = 0; // Gustavo's part corr analysis
123Int_t iPWG4PartCorr = 0; // Gustavo's part corr analysis
124Int_t iPWG4CaloQA = 0; // Gustavo's part corr analysis
125Int_t iPWG4JetCorr = 0; // Paul's jet corr analysis
126Int_t iPWG4Tagged = 0; // Gustavo's part corr analysis
127Int_t iPWG4omega3pi = 0; // Omega to 3 pi analysis (PWG4)
128Int_t iPWG4GammaConvLib = 0; // Gamma Conversio
129Int_t iPWG4GammaConv = 0; // Gamma Conversio
130Int_t iPWG4CaloConv = 0; // Gamma Conversio
131Int_t kHighPtFilterMask = 32; // change depending on the used AOD Filter
132TString kDeltaAODJetName = "AliAOD.Jets.root";
133TString kDeltaAODJCORRANName = "AliAOD.JCORRAN.root";
134TString kDeltaAODPartCorrName = "AliAOD.PartCorr.root";
135TString kFastEmbeddingAOD = "emb/AliAOD.root";
136TString kFastEmbAODList = "";
137
138//==============================================================================
139// ### PROOF Steering varibales
140//==============================================================================
141//== proof setup variables
142TString kProofCluster = "alicecaf.cern.ch";
143Bool_t kProofUseAFPAR = kFALSE; // use AF special par file
144TString kProofAFversion = "AF-v4-17";
145//== proof input and output variables
146TString kProofDataSet = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
147Bool_t kProofSaveToAlien = kFALSE; // save proof outputs in AliEn train_[trainName]_ddMonthyyyy_time.C
148TString kProofOutdir = "";
149Bool_t kProofClearPackages = kFALSE;
150Int_t kProofEvents = 10000;
151Int_t kProofOffset = 0;
152//== proof process variables
153
154
155//==============================================================================
156// ### Grid plugin Steering varibiables
157//==============================================================================
158//== grid plugin setup variables
159Bool_t kPluginUse = kTRUE; // do not change
160Bool_t kPluginUseProductionMode = kFALSE; // use the plugin in production mode
161TString kPluginRootVersion = "v5-27-06b"; // *CHANGE ME IF MORE RECENT IN GRID*
162TString kPluginAliRootVersion = "v4-19-15-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
163Bool_t kPluginMergeViaJDL = kTRUE; // merge via JDL
164Bool_t kPluginFastReadOption = kFALSE; // use xrootd tweaks
165Bool_t kPluginOverwriteMode = kTRUE; // overwrite existing collections
166Int_t kPluginOutputToRunNumber = 1; // write the output to subdirs named after run number
167// TString kPluginExecutableCommand = "root -b -q";
168TString kPluginExecutableCommand = "source /Users/kleinb/setup_32bit_aliroot_trunk_clean_root_trunk.sh; alienroot -b -q ";
169
170// == grid plugin input and output variables
171TString kGridDatadir = "/alice/sim/PDC_08b/LHC09a1/AOD/";
172Int_t kGridMaxRunsFromList = 999999999;
173Int_t kGridOffsetRunFromList = 0; // skip the first n runs from the list
174TString kGridLocalRunList = "";
175TString kGridOutdir = ""; // AliEn output directory. If blank will become output_<kTrainName>
176TString kGridDataSet = ""; // sub working directory not to confuse different run xmls
177Int_t kGridRunRange[2] = {0, -1}; // Set the run range
178TString kGridRunPattern = "%03d"; // important for leading zeroes!!
179TString kGridPassPattern = "";
180TString kGridExtraFiles = ""; // files that will be added to the input list in the JDL...
181Int_t kGridMaxMergeFiles = 25; // Number of files merged in a chunk grid run range
182TString kGridMergeExclude = "AliAOD.root"; // Files that should not be merged
183TString kGridOutputStorages = "disk=2"; // Make replicas on the storages
184// == grid process variables
185Int_t kGridRunsPerMaster = 100; // Number of runs per master job
186Int_t kGridFilesPerJob = 100; // Maximum number of files per job (gives size of AOD)
187
188//==============================================================================
189// ### Local Steering variables
190//==============================================================================
191//== local setup variables
192//== local input and output variables
193TString kLocalXMLDataset = ""; // Change local xml dataset for local interactive analysis
194TString kLocalDataList = "local_deltaaod.txt"; // Change local xml dataset for local interactive analysis
195// == local process variables
196
197TString kPluginMode = "";
198TString kAnalysisMode = "";
199
200
201// Temporaries.
202TString anaPars = "";
203TString anaLibs = "";
204TString anaLibsExtra = "";
205TString anaSources = "";
206// Function signatures
207class AliAnalysisAlien;
208
209//______________________________________________________________________________
210void AnalysisTrainPWG4Jets(const char *analysis_mode="local",
211 const char *plugin_mode="",
212 const char *config_file="",Int_t iOffset = 0,Int_t iTotal = 0)
213{
214// Main analysis train macro. If a configuration file is provided, all parameters
215// are taken from there but may be altered by CheckModuleFlags.
216
217 // these flag may be needed by the config file
218 kPluginMode = plugin_mode;
219 kAnalysisMode = analysis_mode;
220
221 if (strlen(config_file) && !LoadConfig(config_file)) return;
222 if(iTotal>0)kGridMaxRunsFromList = iTotal; // overwrites the settings from config file
223 if(iOffset)kGridOffsetRunFromList = iOffset;
224 if(iOffset)kProofOffset = iOffset;
225
226
227 TString smode(analysis_mode);
228 smode.ToUpper();
229 if (kSaveTrain)WriteConfig();
230 // Check compatibility of selected modules
231 CheckModuleFlags(smode);
232 // gROOT->ProcessLine(".trace");
233
234 printf("==================================================================\n");
235 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", kTrainName.Data(),smode.Data());
236 printf("==================================================================\n");
237 printf("= Configuring analysis train for: =\n");
238 if (iAODanalysis) printf("= AOD analysis =\n");
239 else printf("= ESD analysis =\n");
240 if (iPhysicsSelection) printf("= Physics selection =\n");
241 if(iCentralitySelection)printf("= Centrality selection =\n");
242 if (useTender) printf("= Using tender =\n");
243 if (iESDfilter) printf("= ESD filter =\n");
244 if (iJETAN) printf("= Jet analysis =\n");
245 printf("==================================================================\n");
246
247 char *printMask = ":: %20s %10d\n";
248 printf(printMask,"Fill AOD",(UInt_t)kFillAOD);
249 printf(printMask,"Save AOD", (UInt_t)kSaveAOD);
250 printf(printMask,"MC truth", (UInt_t)kUseMC);
251 printf(printMask,"KINE filter", (UInt_t)kUseKinefilter);
252 printf(printMask,"track refs", (UInt_t)kUseTR);
253 printf(printMask,"tags", (UInt_t)kUseESDTags);
254 printf(printMask,"AOD tags", (UInt_t)kUseAODTags);
255 printf(printMask,"debugging", (UInt_t)kUseDebug);
256 printf(printMask,"PAR files", (UInt_t)kUsePAR);
257 printf(printMask,"AliEn plugin", (UInt_t)kPluginUse);
258 printf(printMask,"JETAN subtract", (UInt_t)iJETSUBTRACT);
259 printf(printMask,"PWG1 QA sym", iPWG1QASym);
260 printf(printMask,"PWG4 Source Sara",iPWG4TmpSourceSara);
261 printf(printMask,"PWG4 Fragmentation",iPWG4Fragmentation);
262 printf(printMask,"PWG4 Jet Chem",iPWG4JetChem);
263 printf(printMask,"PWG4 Jet tasks",iPWG4JetTasks);
264 printf(printMask,"PWG4 Jet Services",iPWG4JetServices);
265 printf(printMask,"PWG4 Jet Spectrum",iPWG4JetSpectrum);
266 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
267 printf(printMask,"PWG4 UE",iPWG4UE);
268 printf(printMask,"PWG4 Leading UE",iPWG4LeadingUE);
269 printf(printMask,"PWG4 Corrections UE",iPWG4CorrectionsUE);
270 printf(printMask,"PWG4 Pt QA MC",iPWG4PtQAMC);
271 printf(printMask,"PWG4 Pt Spectra",iPWG4PtSpectra);
272 printf(printMask,"PWG4 Pt QA TPC",iPWG4PtQATPC);
273 printf(printMask,"PWG4 Cosmics",iPWG4Cosmics);
274 printf(printMask,"PWG4 Three Jets",iPWG4ThreeJets);
275 printf(printMask,"PWG4 QGSep",iPWG4QGSep);
276 printf(printMask,"PWG4 Minijet",iPWG4Minijet);
277 printf(printMask,"PWG4 KMeans",iPWG4KMeans);
278 printf(printMask,"PWG4 Cluster",iPWG4Cluster);
279 printf(printMask,"PWG4 Part Corr",iPWG4PartCorr);
280 printf(printMask,"PWG4 Calo QA",iPWG4CaloQA);
281 printf(printMask,"PWG4 Jet Corr",iPWG4JetCorr);
282 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
283 printf(printMask,"PWG4 Tagged",iPWG4Tagged);
284 printf(printMask,"PWG4 omega to 3 pi ",iPWG4omega3pi);
285 printf(printMask,"PWG4 Gamma Conv",iPWG4GammaConv);
286 printf(printMask,"PWG4 Calo Conv",iPWG4CaloConv);
287 printf(printMask,"HighPt FilterMask",kHighPtFilterMask);
288
289 //==========================================================================
290 // Connect to back-end system
291 if (!Connect(smode)) {
292 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
293 return;
294 }
295
296 // Load common libraries and set include path
297 if (!LoadCommonLibraries(smode)) {
298 ::Error("AnalysisTrain", "Could not load common libraries");
299 return;
300 }
301
302
303
304 // Make the analysis manager and connect event handlers
305 AliAnalysisManager *mgr = new AliAnalysisManager("PWG4Train", "pwg4 mini train");
306 if (kCommonOutputFileName.Length()>0)mgr->SetCommonFileName(kCommonOutputFileName.Data());
307 if (kProofSaveToAlien) mgr->SetSpecialOutputLocation(kProofOutdir);
308 mgr->SetNSysInfo(0);
309 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
310 if (kUseSysInfo)mgr->SetNSysInfo(kUseSysInfo);
311 mgr->SetSkipTerminate(kSkipTerminate);
312
313 // Load analysis specific libraries
314 if (!LoadAnalysisLibraries(smode)) {
315 ::Error("AnalysisTrain", "Could not load analysis libraries");
316 return;
317 }
318
319 // Create input handler (input container created automatically)
320 if (iAODanalysis) {
321 // AOD input handler
322 AliAODInputHandler *aodH = new AliAODInputHandler();
323 mgr->SetInputEventHandler(aodH);
324 // if (iPWG4JetTasks) aodH->AddFriend(Form("deltas/%s",kDeltaAODJetName.Data()));
325 // if (iPWG4PartCorr) aodH->AddFriend(Form("deltas/%s"kDeltaAODJetName.Data()));
326 } else {
327 // ESD input handler
328 AliESDInputHandler *esdHandler = new AliESDInputHandler();
329 if (kUseESDTags) esdHandler->SetReadTags();
330 esdHandler->SetReadFriends(kFALSE);
331 mgr->SetInputEventHandler(esdHandler);
332 // if(iPWG4PtQATPC&& !kTrainName.Contains("pass5"))esdHandler->SetActiveBranches("ESDfriend");
333
334 }
335
336 // Monte Carlo handler
337 if (kUseMC && !iAODanalysis) {
338 AliMCEventHandler* mcHandler = new AliMCEventHandler();
339 mgr->SetMCtruthEventHandler(mcHandler);
340 mcHandler->SetReadTR(kUseTR);
341 }
342 // AOD output container, created automatically when setting an AOD handler
343 if (iAODhandler) {
344 // AOD output handler
345 AliAODHandler* aodHandler = new AliAODHandler();
346 aodHandler->SetOutputFileName("AliAOD.root");
347 aodHandler->SetFillAODforRun(kFillAOD);
348 //
349 mgr->SetOutputEventHandler(aodHandler);
350 AliAnalysisDataContainer * cout_aod = mgr->GetCommonOutputContainer();
351 cout_aod->SetSpecialOutput();
352 }
353 // Debugging if needed
354
355 if (kUseDebug){
356 mgr->SetDebugLevel(3);
357 }
358 if(kUseSysInfo>0){
359 mgr->RegisterExtraFile("syswatch.root");
360 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
361 kGridMergeExclude += "syswatch.root";
362 }
363 else{
364 AliLog::SetGlobalLogLevel(AliLog::kError);
365 }
366
367
368 //==========================================================================
369 // Create the chain. In this example it is created only from ALIEN files but
370 // can be done to work in batch or grid mode as well.
371 TChain *chain = CreateChain(smode, plugin_mode);
372
373 //==========================================================================
374 // Load the tasks configuration macros for all wagons. These files are supposed now to be
375 // in the current workdir, but in AliEn they will be in the file catalog,
376 // mapped from AliRoot and pecified in the jdl input list.
377
378 // For now connection to top input container and common AOD output container
379 // is done in this macro, but in future these containers will be connected
380 // from each task configuration macro.
381
382 //
383 // Tender and supplies. Needs to be called for every event.
384 //
385
386 if (useTender) {
387 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/TenderSupplies/AddTaskTender.C");
388 AliAnalysisTaskSE *tender = AddTaskTender(kTRUE);
389 // tender->SelectCollisionCandidates();
390 tender->SetDebugLevel(2);
391 }
392
393
394 Float_t fTrackEtaWindow = 0.9;
395 Float_t fJetEtaWindow = 0.5;
396
397 if(kIsPbPb){// for pass1
398 Float_t fTrackEtaWindow = 0.8;
399 Float_t fJetEtaWindow = 0.4;
400 }
401
402 if(iPhysicsSelection && !iAODanalysis){
403 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
404 Int_t iTriggerHIC = 0;
405 Bool_t rejectBkg = true;
406 if(kIsPbPb){
407 iTriggerHIC = 2;
408 rejectBkg = false; // for the moment...
409 }
410 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kIsMC,rejectBkg);
411 iPhysicsSelectionFlag = AliVEvent::kMB;
412 mgr->RegisterExtraFile("EventStat_temp.root");
413 mgr->AddStatisticsTask();
414 }
415
416 if(iCentralitySelection){
417
418 // has to run before AOD filter
419 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskCentrality.C");
420 // const char* file1="$ALICE_ROOT/ANALYSIS/macros/AliCentralityBy1D_137161.root";
421 // const char* file2="$ALICE_ROOT/ANALYSIS/macros/AliCentralityByFunction_137161.root";
422 AliCentralitySelectionTask *taskC = AddTaskCentrality();
423 if (!taskC) ::Warning("AnalysisTrainPWG4Jets", "AliCentralitySelectionTask cannot run for this train conditions - EXCLUDED");
424 }
425
426 if (iESDfilter && !iAODanalysis) {
427 // ESD filter task configuration.
428 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskESDFilterPWG4Train.C");
429 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilter(kUseKinefilter,kUseMuonfilter);
430 taskesdfilter->SetEnableFillAOD(!kFilterAOD);
431
432 if(kIsMC){
433 mgr->RegisterExtraFile("pyxsec_hists.root");
434 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
435 kGridMergeExclude += "pyxsec_hists.root";
436
437 }
438 }
439
440 // AOD tags
441 if (kUseAODTags) {
442 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
443 mgr->AddTask(tagTask);
444 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
445 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
446 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
447 mgr->ConnectOutput(tagTask, 1, coutTags);
448 }
449
450 if (iPWG4FastEmbedding) {
451 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFastEmbedding.C");
452 AliAnalysisTaskFastEmbedding *taskEmbedding = 0;
453 if(kFastEmbAODList.Length()) taskEmbedding = AddTaskFastEmbedding(kFastEmbAODList, 1);
454 else taskEmbedding = AddTaskFastEmbedding(kFastEmbeddingAOD, 0);
455 taskEmbedding->SetJetBranch("jetsAOD_UA104_B0_Filter00256_Cut01000");
456 // taskEmbedding->SetEvtSelecMode(AliAnalysisTaskFastEmbedding::kEventsAll);
457 // taskEmbedding->SetDebugLevel(10);
458 }
459
460 // Jet analysis
461 if (iJETAN) {
462 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJets.C");
463 AliAnalysisTaskJets *taskjets = 0;
464 if(iJETAN&1){
465 /*
466 taskjets = AddTaskJets(kHighPtFilterMask);
467 taskjets->SetName("StandardJets");
468 taskjets->SetNonStdBranch("");
469 */
470 }
471 if(iJETAN&2){
472 // Set only few jet finders backgroudn subtraction w an wo
473
474 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
475 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
476
477 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
478 if(kIsPbPb){
479 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
480 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
481 }
482
483 TString cTmp("");
484
485 // SICONE
486 taskjets = AddTaskJets("AOD","SISCONE",0.4,kHighPtFilterMask,0.15,0); //no background subtraction to be done later....
487 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
488 cTmp = taskjets->GetNonStdBranch();
489 if(cTmp.Length()>0)kJetSubtractBranches += Form("%s ",cTmp.Data());
490
491 if(kUseAODMC){
492 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
493 if(kIsPbPb){
494 taskjets = AddTaskJets("AODMC","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
495 taskjets = AddTaskJets("AODMC2","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
496 }
497 else{
498 taskjets = AddTaskJets("AODMC","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
499 taskjets = AddTaskJets("AODMC2","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
500 }
501 }
502 if(kDeltaAODJetName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJetName.Data());
503 }
504 if (!taskjets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
505 }
506
507
508 if (iPWG4FastEmbedding && iJETAN) {
509 AliAnalysisTaskJets *taskEmbJets = AddTaskJets("AODextra", "FASTJET", 0.4, kHighPtFilterMask);
510 taskEmbJets->ReadAODFromOutput();
511 kJetSubtractBranches_extra += Form("%s ", taskEmbJets->GetNonStdBranch());
512
513 taskEmbJets = AddTaskJets("AODextraonly", "FASTJET", 0.4, kHighPtFilterMask);
514 taskEmbJets->ReadAODFromOutput();
515
516 taskEmbJets = AddTaskJets("AODextra", "UA1", 0.4, kHighPtFilterMask,1.,0);
517 taskEmbJets->ReadAODFromOutput();
518 taskEmbJets = AddTaskJets("AODextraonly", "UA1", 0.4, kHighPtFilterMask,1.,0);
519 taskEmbJets->ReadAODFromOutput();
520 taskEmbJets = AddTaskJets("AODextra", "UA1", 0.4, kHighPtFilterMask,1.,2);
521 taskEmbJets->ReadAODFromOutput();
522 }
523
524 if(iPWG4Cluster){
525 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCluster.C");
526 AliAnalysisTaskJetCluster *taskCl = 0;
527 Float_t fCenUp = 0;
528 Float_t fCenLo = 0;
529 if(kIsPbPb&&!kIsMC){
530 fCenLo = 0;
531 fCenUp = 80;
532 }
533 if(iPWG4Cluster&1){
534
535 if(kIsPbPb){
536 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
537 taskCl->SetBackgroundCalc(kTRUE);
538 taskCl->SetCentralityCut(fCenLo,fCenUp);
539 taskCl->SetGhostEtamax(0.9);
540 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
541
542 if (iPWG4FastEmbedding) {
543 AliAnalysisTaskJetCluster *taskClEmb = 0;
544 taskClEmb = AddTaskJetCluster("AODextra","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
545 taskClEmb->SetBackgroundCalc(kTRUE);
546 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
547 taskClEmb->SetGhostEtamax(fTrackEtaWindow);
548 kDefaultJetBackgroundBranch_extra = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskClEmb->GetJetOutputBranch());
549
550 taskClEmb = AddTaskJetCluster("AODextraonly","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
551 taskClEmb->SetBackgroundCalc(kFALSE);
552 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
553 taskClEmb->SetGhostEtamax(fTrackEtaWindow);
554
555 taskClEmb = AddTaskJetCluster("AODextra","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow);
556 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
557 taskClEmb->SetBackgroundBranch(kDefaultJetBackgroundBranch_extra.Data());
558 kJetSubtractBranches_extra += Form("%s ",taskClEmb->GetJetOutputBranch());
559
560 taskClEmb = AddTaskJetCluster("AODextraonly","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow);
561 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
562 }
563
564 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.2,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
565 taskCl->SetBackgroundCalc(kTRUE);
566 taskCl->SetCentralityCut(fCenLo,fCenUp);
567 taskCl->SetGhostEtamax(fTrackEtaWindow);
568 }
569 else{
570 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1,kDeltaAODJetName.Data(),0.15); // this one is for the background jets
571 taskCl->SetBackgroundCalc(kTRUE);
572 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
573 taskCl->SetGhostEtamax(fTrackEtaWindow);
574
575 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1,kDeltaAODJetName.Data(),0.15);
576 taskCl->SetBackgroundCalc(kTRUE);
577 taskCl->SetGhostEtamax(fTrackEtaWindow);
578 }
579
580 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,2,1,kDeltaAODJetName.Data(),0.15);
581 taskCl->SetCentralityCut(fCenLo,fCenUp);
582 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
583 taskCl->SetNRandomCones(10);
584 kDefaultJetBranch = taskCl->GetJetOutputBranch();
585 if(kDeltaAODJetName.Length()==0&&kFilterAOD){
586 if(kIsPbPb)taskCl->SetJetTriggerPtCut(40.);
587 else taskCl->SetJetTriggerPtCut(20.);
588 }
589
590 kJetSubtractBranches += Form("%s ",taskCl->GetJetOutputBranch());
591
592 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.2,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow);
593 taskCl->SetCentralityCut(fCenLo,fCenUp);
594 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
595 kJetSubtractBranches += Form("%s ",taskCl->GetJetOutputBranch());
596
597 if(kUseAODMC){
598 if(kIsPbPb){
599 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
600 taskCl->SetBackgroundCalc(kTRUE);
601 taskCl->SetGhostEtamax(0.9);
602 kDefaultJetBackgroundBranchMC = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
603
604 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
605 taskCl->SetBackgroundCalc(kTRUE);
606 taskCl->SetGhostEtamax(fTrackEtaWindow);
607 kDefaultJetBackgroundBranchMC2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch(),fTrackEtaWindow);
608 }
609 else{
610 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
611 taskCl->SetBackgroundCalc(kTRUE);
612 taskCl->SetGhostEtamax(fTrackEtaWindow);
613 kDefaultJetBackgroundBranchMC = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
614
615 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
616 taskCl->SetBackgroundCalc(kTRUE);
617 taskCl->SetGhostEtamax(fTrackEtaWindow);
618 kDefaultJetBackgroundBranchMC2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
619 // pp background calcs...
620 }
621
622 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow);
623 taskCl->SetGhostEtamax(fTrackEtaWindow);
624 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC.Data());
625 kDefaultJetBranchMC = taskCl->GetJetOutputBranch();
626
627 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow);
628 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC2.Data());
629 kDefaultJetBranchMC2 = taskCl->GetJetOutputBranch();
630
631 }
632
633
634 if (!taskCl) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCluster cannot run for this train conditions - EXCLUDED");
635 }
636 }
637
638
639 if(iJETSUBTRACT){
640 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetBackgroundSubtract.C");
641 AliAnalysisTaskJetBackgroundSubtract *taskSubtract = 0;
642 if(kJetSubtractBranches.Length()){
643
644 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches,3,kJetSubtractMask1.Data(),kJetSubtractMask2.Data());
645 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
646 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
647
648 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches,2,kJetSubtractMask1.Data(),kJetSubtractMask2.Data());
649 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data()); taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
650 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
651
652 // taskSubtract->SetDebugLevel(3);
653
654 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches,1,kJetSubtractMask1.Data(),kJetSubtractMask2.Data());
655 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data()); taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
656 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
657
658 if(kJetSubtractBranches.Contains(kDefaultJetBranch.Data())&&kIsPbPb){
659 kDefaultJetBranch.ReplaceAll(taskSubtract->GetToReplace(),Form(taskSubtract->GetReplacementMask(),taskSubtract->GetSubtractionMethod()));
660 }
661 }
662 if(kJetSubtractBranches_extra.Length()){
663 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches_extra,1,kJetSubtractMask1.Data(),kJetSubtractMask2.Data(),"extra");
664 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch_extra.Data());
665 taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
666 //taskSubtract->SetDebugLevel(3);
667 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
668 if(kJetSubtractBranches_extra.Contains(kDefaultJetBranch.Data())){
669 kDefaultJetBranch.ReplaceAll(taskSubtract->GetToReplace(),Form(taskSubtract->GetReplacementMask(),taskSubtract->GetSubtractionMethod()));
670 }
671 }
672 if (!taskSubtract) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetBackgroundSubtrac cannot run for this train conditions - EXCLUDED");
673 }
674
675 if (iDIJETAN) {
676 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskDiJets.C");
677 AliAnalysisTaskDiJets *taskdijets = 0;
678 if(iDIJETAN&1)taskdijets = AddTaskDiJets();
679 if (!taskdijets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
680 if(iDIJETAN&2){
681 taskdijets = AddTaskDiJets("jetsAOD_CDF07");
682 taskdijets = AddTaskDiJets("jetsAOD_DA07");
683 taskdijets = AddTaskDiJets("jetsAOD_FASTJET07");
684 taskdijets = AddTaskDiJets("jetsAOD_FASTKT07");
685 taskdijets = AddTaskDiJets("jetsAOD_SISCONE07");
686 taskdijets = AddTaskDiJets("jetsAOD_UA107");
687 }
688 }
689
690 if(iPWG1QASym){
691 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskQAsym.C");
692 AliAnalysisTaskQASym *taskQASym = AddTaskQAsym(-1);
693 if (!taskQASym) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQASym cannot run for this train conditions - EXCLUDED");
694 }
695
696
697
698 if(iPWG4TmpSourceSara){
699 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskEta.C");
700 AliAnalysisTaskEta *taskEta = AddTaskEta();
701 if (!taskEta) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskEta cannot run for this train conditions - EXCLUDED");
702 }
703
704
705 if(iPWG4JetServices){
706 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetServices.C");
707 AliAnalysisTaskJetServices *taskjetServ = 0;
708 taskjetServ = AddTaskJetServices();
709 if (!taskjetServ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetServices cannot run for this train conditions - EXCLUDED");
710 if(kGridRunRange[0]>0)taskjetServ->SetRunRange(kGridRunRange[0],kGridRunRange[1]);
711 else taskjetServ->SetRunRange(110000,160000);
712 taskjetServ->SetMCData(kIsMC);
713 taskjetServ->SetUsePhysicsSelection((Bool_t)iPhysicsSelection);
714 taskjetServ->SetPhysicsSelectionFlag(iPhysicsSelectionFlag); //
715 taskjetServ->SetNonStdFile(kDeltaAODJetName.Data());
716 if(kIsPbPb){
717 if(kDeltaAODJetName.Length()>0&&kFilterAOD)taskjetServ->SetFilterAODCollisions(kTRUE);
718 // else if(iAODanalysis)taskjetServ->SetFilterAODCollisions(kTRUE);
719
720 taskjetServ->SetZVertexCut(8.);
721 }
722 if(iAODanalysis){
723 // taskjetServ->SetDebugLevel(3);
724 taskjetServ->SetAODInput(kTRUE);
725 }
726 }
727
728if(iPWG4JetSpectrum){
729 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetSpectrum2.C");
730 AliAnalysisTaskJetSpectrum2 *taskjetSpectrum = 0;
731 TString bkgClusters = kDefaultJetBackgroundBranch.Data();
732 bkgClusters.ReplaceAll(Form("%s_",AliAODJetEventBackground::StdBranchName()),"");
733
734 if(iPWG4JetSpectrum&1){
735 if(kIsPbPb){
736 for(int i = 0;i<5;i++){
737 TString tmp(kDefaultJetBranch.Data());
738 // tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),1),kJetSubtractMask1.Data());
739 // tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),1),kJetSubtractMask1.Data());
740 tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),1),Form(kJetSubtractMask1.Data(),0));
741
742 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),tmp.Data(),"",kHighPtFilterMask,AliVEvent::kMB,0,i);
743 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
744 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
745
746 // taskjetSpectrum->SetDebugLevel(3);
747 // taskjetSpectrum->SetMinJetPt(10);
748 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
749 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
750 if(iAODanalysis)SetAODInput(taskjetSpectrum);
751
752
753 // check the old subtracted vs. the new subtracted
754 TString tmp2(kDefaultJetBranch.Data());
755 tmp2.ReplaceAll(Form(kJetSubtractMask2.Data(),1),Form(kJetSubtractMask2.Data(),2));
756 taskjetSpectrum = AddTaskJetSpectrum2(tmp2.Data(),kDefaultJetBranch.Data(),"",kHighPtFilterMask,AliVEvent::kMB,0,i);
757 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
758 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
759 // taskjetSpectrum->SetDebugLevel(3);
760 // taskjetSpectrum->SetMinJetPt(10);
761 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
762 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
763 if(iAODanalysis)SetAODInput(taskjetSpectrum);
764
765 // check the old subtracted vs. the new subtracted
766 TString tmp3(kDefaultJetBranch.Data());
767 tmp3.ReplaceAll(Form(kJetSubtractMask2.Data(),1),Form(kJetSubtractMask2.Data(),3));
768
769 taskjetSpectrum = AddTaskJetSpectrum2(tmp3.Data(),kDefaultJetBranch.Data(),"",kHighPtFilterMask,AliVEvent::kMB,0,i);
770 // taskjetSpectrum->SetDebugLevel(3);
771 // taskjetSpectrum->SetMinJetPt(10);
772 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
773 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
774 taskjetSpectrum->SetTrackEtaWindow(0.8);
775 taskjetSpectrum->SetJetEtaWindow(0.4);
776 if(iAODanalysis)SetAODInput(taskjetSpectrum);
777
778
779 taskjetSpectrum = AddTaskJetSpectrum2(Form("jetsAOD_UA104_B2_Filter%05d_Cut01000",kHighPtFilterMask),kDefaultJetBranch.Data(),"",kHighPtFilterMask,AliVEvent::kMB,0,i);
780 // taskjetSpectrum->SetDebugLevel(3);
781 // taskjetSpectrum->SetMinJetPt(10);
782 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
783 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
784 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
785 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
786 if(iAODanalysis)SetAODInput(taskjetSpectrum);
787
788 }
789 }
790 else{ // ! PbPb
791 Int_t i = 0;
792 TString tmp(kDefaultJetBranch.Data());
793 // tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),1),kJetSubtractMask1.Data());
794 // tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),1),kJetSubtractMask1.Data());
795 tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),0),Form(kJetSubtractMask1.Data(),1));
796 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),tmp.Data(),"",kHighPtFilterMask,AliVEvent::kMB,0,i);
797 taskjetSpectrum->SetDebugLevel(3);
798 // taskjetSpectrum->SetMinJetPt(10);
799 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
800 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
801 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
802 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
803 if(iAODanalysis)SetAODInput(taskjetSpectrum);
804
805
806 /*
807 TString tmp2(kDefaultJetBranch.Data());
808 tmp2.ReplaceAll(Form(kJetSubtractMask2.Data(),0),Form(kJetSubtractMask2.Data(),2));
809 taskjetSpectrum = AddTaskJetSpectrum2(tmp2.Data(),kDefaultJetBranch.Data(),"",kHighPtFilterMask,AliVEvent::kMB,0,i);
810 // taskjetSpectrum->SetDebugLevel(3);
811 // taskjetSpectrum->SetMinJetPt(10);
812 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
813 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
814 taskjetSpectrum->SetTrackEtaWindow(0.8);
815 taskjetSpectrum->SetJetEtaWindow(0.4);
816
817 // check the old subtracted vs. the new subtracted
818 TString tmp3(kDefaultJetBranch.Data());
819 tmp3.ReplaceAll(Form(kJetSubtractMask2.Data(),0),Form(kJetSubtractMask2.Data(),3));
820 taskjetSpectrum = AddTaskJetSpectrum2(tmp3.Data(),kDefaultJetBranch.Data(),"",kHighPtFilterMask,AliVEvent::kMB,0,i);
821 // taskjetSpectrum->SetDebugLevel(3);
822 // taskjetSpectrum->SetMinJetPt(10);
823 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
824 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
825 taskjetSpectrum->SetTrackEtaWindow(0.8);
826 taskjetSpectrum->SetJetEtaWindow(0.4);
827 if(iAODanalysis)SetAODInput(taskjetSpectrum);
828 */
829 }
830 if (!taskjetSpectrum) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetSpectrum2 cannot run for this train conditions - EXCLUDED");
831 }
832 }
833
834 if(iPWG4Fragmentation){
835 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFragmentationFunction.C");
836 AliAnalysisTaskFragmentationFunction *taskFrag = 0;
837 if(kUseAODMC){
838
839 }
840 else{
841 taskFrag = AddTaskFragmentationFunction(kDefaultJetBranch.Data(),"","","",kHighPtFilterMask);
842 }
843 if (!taskFrag) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskFragmentationFunction cannot run for this train conditions - EXCLUDED");
844 }
845
846 if(iPWG4JetChem){
847 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetChem.C");
848 AliAnalysisTask *taskChem = AddTaskJetChem(kHighPtFilterMask);
849 if (!taskChem) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetChem cannot run for this train conditions - EXCLUDED");
850 }
851
852 if (iPWG4JetResponse) {
853 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetResponse.C");
854 AliAnalysisTask *taskJetResponse = 0;
855
856 if(iJETAN){
857 taskJetResponse = AddTaskJetResponse("jets", "FASTJET", 0.4, kHighPtFilterMask, 0.15, 0);
858 taskJetResponse = AddTaskJetResponse("jets", "FASTJET", 0.4, kHighPtFilterMask, 0.15, 1);
859
860 taskJetResponse = AddTaskJetResponse("jets", "UA1", 0.4, kHighPtFilterMask, 1., 0);
861 taskJetResponse = AddTaskJetResponse("jets", "UA1", 0.4, kHighPtFilterMask, 1., 2);
862 }
863 if(iPWG4Cluster){
864 taskJetResponse = AddTaskJetResponse("clusters", "ANTIKT", 0.4, kHighPtFilterMask, 0.15, 0);
865 taskJetResponse = AddTaskJetResponse("clusters", "ANTIKT", 0.4, kHighPtFilterMask, 0.15, 1);
866 }
867 if (!taskJetResponse) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetResponse cannot run for this train conditions - EXCLUDED");
868
869 }
870
871 if(iPWG4JCORRAN){
872 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJCORRANTask.C");
873 AliJCORRANTask* corran = AddTaskJCORRAN(kDeltaAODJCORRANName.Data(),0);
874 if(!corran)::Warning("AnalysisTrainPWG4Jets", "AliJCORRANTask cannot run for this train conditions - EXCLUDED");
875 else{
876 if(kDeltaAODJCORRANName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJCORRANName.Data());
877 }
878 }
879
880 if(iPWG4UE){
881 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskUE.C");
882 AliAnalysisTaskUE *taskUE = 0;
883 if(iPWG4UE&1)taskUE = AddTaskUE();
884 if(iPWG4UE&2){
885 taskUE =AddTaskUE("jetsAOD_CDF04","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
886 // taskUE =AddTaskUE("jetsAOD_CDF07","CDF", "LJ", "TRANSV","MSP");
887 taskUE =AddTaskUE("jetsAOD_SISCONE04","CDF", "LJ", "TRANSV","MSP");
888 // taskUE =AddTaskUE("jetsAOD_SISCONE07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
889 taskUE =AddTaskUE("jetsAOD_ICDF","CDF","LJ","TRANSV","MSP");
890 taskUE =AddTaskUE("jetsAOD_FASTKT04","CDF", "LJ", "TRANSV","MSP");
891 // taskUE =AddTaskUE("jetsAOD_FASTKT07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
892 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta05", "TRANSV","MSP");
893 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta09", "TRANSV","MSP");
894 }
895
896 if (!taskUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskUE cannot run for this train conditions - EXCLUDED");
897 }
898
899 if(iPWG4LeadingUE){
900 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskLeadingTrackUE.C");
901 AliAnalysisTaskLeadingTrackUE *taskLeadingUE = AddTaskLeadingTrackUE(kUseMC);
902 if (!taskLeadingUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTasLeadingTrackkUE cannot run for this train conditions - EXCLUDED");
903 // taskLeadingUE->SetFilterBit(64);
904 }
905
906
907 if(iPWG4CorrectionsUE){
908 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCorrectionsUE.C");
909 AliAnalysisTaskCorrectionsUE *taskCorrectionsUE = 0;
910 if(iPWG4CorrectionsUE&1)taskCorrectionsUE = AddTaskCorrectionsUE("jetsAOD_NONE","CDF","MP_eta05","TRANSV","MSP",kFALSE);
911 if (!taskCorrectionsUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCorrectionsUE cannot run for this train conditions - EXCLUDED");
912 }
913
914 if(iPWG4ThreeJets){
915 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskThreeJets.C");
916 AliAnalysisTaskThreeJets *taskThree = AddTaskThreeJets();
917 if(!taskThree)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskThreets cannot run for this train conditions - EXCLUDED");
918 }
919 if(iPWG4QGSep){
920 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskQGSep.C");
921 AliAnalysisTaskQGSep *taskQGSep = AddTaskQGSep(kUseMC,iAODanalysis);
922 if(!taskQGSep)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQGSep cannot run for this train conditions - EXCLUDED");
923 }
924
925
926 if(iPWG4Minijet){
927 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskMinijet.C");
928 AliAnalysisTaskMinijet *taskMini = AddTaskMinijet(-1,"esd",kUseMC,kGridDataSet);
929 // if we ha highmult trigger add another task
930 if(!taskMini)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskMinjet cannot run for this train conditions - EXCLUDED");
931 }
932
933
934 if(iPWG4PtQAMC){
935 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQAMC.C");
936 AliPWG4HighPtQAMC *taskQAMC = 0;
937 if(kUseMC){
938 if(iPWG4PtQAMC&1){
939 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),0);
940 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),1);
941 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),2);
942 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),3);
943 }
944 }
945 if (!taskQAMC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQAMC cannot run for this train conditions - EXCLUDED");
946 }
947
948 if(iPWG4PtQATPC){
949 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQATPConly.C");
950 AliPWG4HighPtQATPConly *taskQATPC = 0;
951 if(iPWG4PtQATPC&1)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),1);
952 if(iPWG4PtQATPC&2)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),2);
953
954 if (!taskQATPC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQATPC cannot run for this train conditions - EXCLUDED");
955 }
956
957 if(iPWG4Cosmics){
958 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4CosmicCandidates.C");
959
960 AliPWG4CosmicCandidates *taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(0);
961 taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(1);
962
963 if (!taskPWG4CosmicCandidates) ::Warning("AnalysisTrainPWG4Jets", "AddTaskPWG4CosmicCandidates cannot run for this train conditions - EXCLUDED");
964 }
965
966
967 if(iPWG4PtSpectra){
968 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtSpectra.C");
969 AliPWG4HighPtSpectra *taskPtSpectra = AddTaskPWG4HighPtSpectra(kGridDataSet.Data(),0);
970 AliPWG4HighPtSpectra *taskPtSpectra = AddTaskPWG4HighPtSpectra(kGridDataSet.Data(),1);
971 if (!taskPtSpectra) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskPtSpectra cannot run for this train conditions - EXCLUDED");
972 }
973
974 if(iPWG4KMeans){
975 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskKMeans.C");
976 AliAnalysisTaskKMeans *taskKMeans = AddTaskKMeans();
977 if (!taskKMeans) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskKMenans cannot run for this train conditions - EXCLUDED");
978 }
979
980 if(iPWG4PartCorr){
981 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPartCorr.C");
982 AliAnalysisTaskParticleCorrelation *taskpartcorrPHOS = AddTaskPartCorr("AOD", "PHOS",kFALSE,kIsMC);
983 if (!taskpartcorrPHOS) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation PHOS cannot run for this train conditions - EXCLUDED");
984 AliAnalysisTaskParticleCorrelation *taskpartcorrEMCAL = AddTaskPartCorr("AOD", "EMCAL",kFALSE,kIsMC);
985 if (!taskpartcorrEMCAL) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation EMCAL cannot run for this train conditions - EXCLUDED");
986 if(kDeltaAODPartCorrName.Length()>0)mgr->RegisterExtraFile(kDeltaAODPartCorrName.Data());
987 }
988
989 if(iPWG4CaloQA){
990 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/QA/AddTaskCalorimeterQA.C");
991 AliAnalysisTaskParticleCorrelation *taskcaloQA = AddTaskCalorimeterQA("ESD",kFALSE,kIsMC,kCaloQAOutputFileName.Data());
992 if(!taskcaloQA)::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation QA cannot run - EXCLUDED");
993 // if(kCaloQAOutputFileName.Length()>0)mgr->RegisterExtraFile(kCaloQAOutputFileName.Data());
994 }
995
996 if(iPWG4JetCorr){
997 // using namespace JetCorrelHD;
998 TString cdir = gSystem->WorkingDirectory();
999 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
1000 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCorrel.C");
1001 AliAnalysisTaskJetCorrel *taskjetcorr = AddTaskJetCorrel();
1002 gSystem->ChangeDirectory(cdir);
1003 if (!taskjetcorr) ::Warning("AnalysisTrainNew", "AliAnalysisTaskJetCorrel cannot run for this train conditions - EXCLUDED");
1004 }
1005
1006 if(iPWG4Tagged){
1007 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskTaggedPhotons.C");
1008 AliAnalysisTaskTaggedPhotons * taskTagged = AddTaskTaggedPhotons(kFALSE); // EMCAL
1009 taskTagged = AddTaskTaggedPhotons(kTRUE); // PHOS
1010 if (!taskTagged) ::Warning("AnalysisTrainNew", "AliAnalysisTaskTaggedPhotons cannot run for this train conditions - EXCLUDED");
1011 }
1012 if (iPWG4omega3pi) {
1013 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskomega3pi.C");
1014 AliAnalysisTaskOmegaPi0PiPi *taskomega3pi = AddTaskomega3pi();
1015 if (!taskomega3pi) ::Warning("AnalysisTrainNew", "AliAnalysisTaskomega3pi cannot run\
1016 for these train conditions - EXCLUDED");
1017 }
1018
1019 // PWG4 gamma conversion analysis
1020 if (iPWG4GammaConv) {
1021 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskGammaConversion.C");
1022 TString cdir = gSystem->WorkingDirectory();
1023 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
1024 // TString gcArguments = "-run-on-train -run-jet -run-chic -run-neutralmeson -run-cf";
1025 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
1026 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
1027 TString gcArguments = "-run-on-train -run-jet -run-omega-meson -use-own-xyz -run-neutralmeson -no-aod";
1028 // TString kGCAnalysisCutSelectionId="9003562000100310";
1029 // TString kGCAnalysisCutSelectionId="9003562000100312";
1030 // gcArguments.Append(Form(" -set-cut-selection %s ",kGCAnalysisCutSelectionId.Data()));
1031 if(!kIsMC)gcArguments += " -mc-off";
1032 AliAnalysisTaskGammaConversion * taskGammaConversion = AddTaskGammaConversion(gcArguments,mgr->GetCommonInputContainer());
1033 gSystem->ChangeDirectory(cdir);
1034 taskGammaConversion->SelectCollisionCandidates();
1035 if (!taskGammaConversion) ::Warning("AnalysisTrainNew", "AliAnalysisTaskGammaConversion cannot run for these train conditions - EXCLUDED");
1036 }
1037
1038 if (iPWG4CaloConv) {
1039 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCaloConv.C");
1040 AliAnalysisTaskCaloConv * taskCaloConv = AddTaskCaloConv();
1041 if (!taskCaloConv) ::Warning("AnalysisTrainNew", "AliAnalysisTaskCaloConv cannot run for these train conditions - EXCLUDED");
1042 }
1043
1044
1045
1046 //==========================================================================
1047 // FOR THE REST OF THE TASKS THE MACRO AddTaskXXX() is not yet implemented/
1048 // Run the analysis
1049 //
1050 if (kPluginUse) {
1051 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1052 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1053 }
1054
1055 if (mgr->InitAnalysis()) {
1056 mgr->PrintStatus();
1057 // if (kSaveTrain || strlen(config_file)) gSystem->ChangeDirectory(kTrainName);
1058 if (!strcmp(plugin_mode,"submit")&&smode=="GRID"){
1059 TString alien_workdir = gGrid->GetHomeDirectory();
1060 if (iAODanalysis) alien_workdir += "analysisAOD";
1061 else alien_workdir += "analysisESD";
1062 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1063 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1064 printf("=== AnalysisTrainPWG4Jets:: Registering jdl in the work directory alien://%s/%s, should be done by the manager! ===\n",
1065 alien_workdir.Data(),gridhandler->GetGridOutputDir());
1066
1067 TString dest;
1068 dest = Form("%s/%s/%s.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1069 if(AliAnalysisAlien::FileExists(dest.Data())){
1070 Printf("%s exist on grid removing...",dest.Data());
1071 gGrid->Rm(dest.Data());
1072 }
1073 Printf("%s copy ...",dest.Data());
1074 TFile::Cp(Form("file:%s.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
1075
1076
1077 TString dest;
1078 dest = Form("%s/%s/%s_merge.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1079 if(AliAnalysisAlien::FileExists(dest.Data())){
1080 Printf("%s exist on grid removing...",dest.Data());
1081 gGrid->Rm(dest.Data());
1082 }
1083 Printf("%s copy ...",dest.Data());
1084 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
1085
1086 dest = Form("%s/%s/%s_merge_final.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1087 if(AliAnalysisAlien::FileExists(dest.Data())){
1088 Printf("%s exist on grid removing...",dest.Data());
1089 gGrid->Rm(dest.Data());
1090 }
1091 Printf("%s copy ...",dest.Data());
1092 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
1093
1094
1095 /*
1096 dest = Form("%s/rootfiles/STEER/LQ1dRef_v1.root",gGrid->GetHomeDirectory());
1097 if(AliAnalysisAlien::FileExists(dest.Data())){
1098 Printf("%s exist on grid removing...",dest.Data());
1099 gGrid->Rm(dest.Data());
1100 }
1101 TFile::Cp(Form("file:%s/STEER/LQ1dRef_v1.root",
1102 gSystem->ExpandPathName("$ALICE_ROOT")),Form("alien://%s",dest.Data()));
1103 */
1104 }
1105 AliLog::SetGlobalLogLevel(AliLog::kError);
1106 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
1107 TFile * fM = TFile::Open("manager_local.root","RECREATE");
1108 mgr->Write();
1109 fM->Close();
1110 }
1111
1112 // grmpf, aliroot error handler overwrites root
1113 gErrorIgnoreLevel = kErrorIgnoreLevel;
1114 if(gErrorIgnoreLevel>3000) AliLog::SetGlobalLogLevel(AliLog::kFatal);
1115 StartAnalysis(smode, chain);
1116 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
1117 for(int i = 0;i < mgr->GetTopTasks()->GetEntries();i++){
1118 mgr->ProfileTask(i);
1119 }
1120 }
1121 if (!strcmp(plugin_mode, "offline")&&smode=="GRID"){
1122 // Offline mode path files
1123 // PatchJDL();
1124 // PatchAnalysisMacro();
1125 }
1126
1127 if (kSaveTrain && smode=="GRID") {
1128 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1129 TString alien_workdir = gGrid->GetHomeDirectory();
1130 if (iAODanalysis) alien_workdir += "analysisAOD";
1131 else alien_workdir += "analysisESD";
1132 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1133 // kGridOutdir = gridhandler->GetGridOutputDir();
1134 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
1135 alien_workdir.Data());
1136 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data())))
1137 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
1138 if (strcmp(plugin_mode, "test"))
1139 TFile::Cp(Form("file:%sConfig.C",kTrainName.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
1140 }
1141 }
1142}
1143
1144//______________________________________________________________________________
1145void StartAnalysis(const char *mode, TChain *chain) {
1146// Start analysis.
1147 Int_t imode = -1;
1148 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1149 if (!strcmp(mode, "LOCAL")) imode = 0;
1150 if (!strcmp(mode, "PROOF")) imode = 1;
1151 if (!strcmp(mode, "GRID")) imode = 2;
1152 switch (imode) {
1153 case 0:
1154 if (!chain) {
1155 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1156 return;
1157 }
1158 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
1159 return;
1160 case 1:
1161 if (!kProofDataSet.Length()) {
1162 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "kProofDataSet is empty");
1163 return;
1164 }
1165 mgr->StartAnalysis(mode, kProofDataSet, kProofEvents,kProofOffset);
1166 return;
1167 case 2:
1168 if (kPluginUse) {
1169 if (!mgr->GetGridHandler()) {
1170 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Grid plugin not initialized");
1171 return;
1172 }
1173 mgr->StartAnalysis("grid",chain,kNumberOfEvents);
1174 } else {
1175 if (!chain) {
1176 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1177 return;
1178 }
1179 mgr->StartAnalysis(mode, chain);
1180 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
1181 }
1182 return;
1183 }
1184}
1185
1186//______________________________________________________________________________
1187void CheckModuleFlags(const char *mode) {
1188// Checks selected modules and insure compatibility
1189 Int_t imode = -1;
1190 if (!strcmp(mode, "LOCAL")) imode = 0;
1191 if (!strcmp(mode, "PROOF")) imode = 1;
1192 if (!strcmp(mode, "GRID")) imode = 2;
1193
1194
1195 if (kUseCPAR) {
1196 kPluginAliRootVersion = ""; // NO aliroot if we use CPAR
1197 }
1198
1199 if (imode==1) {
1200 if (!kUsePAR) {
1201 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
1202 kUsePAR = kTRUE;
1203 }
1204 }
1205 if (imode != 2) {
1206 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
1207 kPluginUse = kFALSE;
1208 }
1209
1210
1211 if(!kIsMC){
1212 // switch off anthin related to MC
1213 kUseMC = 0;
1214 kUseAODMC = 0;
1215 kUseTR = kFALSE;
1216 }
1217
1218 // Decide if we have PbPb
1219 if(kGridDataSet.CompareTo("LHC10h")==0||kGridDataSet.Contains("LHC10h")) {
1220 Printf("Using settings for Pb+Pb");
1221 kIsPbPb = true;
1222 }
1223
1224
1225
1226 if (iAODanalysis) {
1227 // AOD analysis
1228 if (kUseMC)
1229 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
1230 if (kUseAODTags)
1231 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
1232 kUseMC = kFALSE;
1233 kUseTR = kFALSE;
1234 kUseAODTags = kFALSE;
1235 if (iESDfilter)
1236 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
1237 iESDfilter = 0;
1238 if (iPhysicsSelection)
1239 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "Physics Selection disabled in analysis on AOD's");
1240 iPhysicsSelection = 0;
1241 if (!iAODhandler) {
1242 if (iJETAN)
1243 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
1244 iJETAN = 0;
1245 iDIJETAN = 0;
1246 }
1247 // Disable tasks that do not work yet on AOD data
1248 if(iPWG4JCORRAN)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 JCORRAN disabled in analysis on AOD's");
1249 iPWG4JCORRAN = 0;
1250 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
1251 iPWG4PtQAMC = 0;
1252 if( iPWG4PtQATPC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtTPC disabled in analysis on AOD's");
1253 iPWG4PtQATPC = 0;
1254 if( iPWG4Cosmics)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Comics disabled in analysis on AOD's");
1255 iPWG4Cosmics = 0;
1256
1257 if( iPWG4PtSpectra)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
1258 iPWG4PtSpectra = 0;
1259 if(iPWG4KMeans)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4KMeans disabled on AOD's");
1260 iPWG4KMeans = 0;
1261 if (iPWG4JetCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4Jetcorr disabled on AOD's");
1262 iPWG4JetCorr = 0;
1263 if (iPWG4PartCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
1264 iPWG4PartCorr = 0;
1265 if (iPWG4CaloQA)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4CaloQA disabled on AOD's");
1266 iPWG4CaloQA = 0;
1267 if (iPWG4Tagged)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4tagged disabled on AOD's");
1268 iPWG4Tagged = 0;
1269 if (iPWG4omega3pi)
1270 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
1271 iPWG4omega3pi = 0;
1272 if(iPWG1QASym)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG1 QA Sym disabled in analysis on AOD's");
1273 if (iPWG4GammaConv)::Info("AnalysisPWG4Jets.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's");
1274 iPWG4GammaConv = 0;
1275 iPWG1QASym = 0;
1276 iCentralitySelection = 0;
1277 } else {
1278 // ESD analysis
1279
1280 if(kIsPbPb){
1281 iCentralitySelection = 1;
1282 }
1283
1284 if (!kUseMC){
1285 kUseTR = kFALSE;
1286
1287 if(kUseKinefilter)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Kine Filter disabled in analysis without MC");
1288 kUseKinefilter = kFALSE;
1289 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis without MC");
1290 iPWG4PtQAMC = 0;
1291 if( iPWG4CorrectionsUE)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 CorrectionsUE disabled in analysis without MC");
1292 iPWG4CorrectionsUE = 0;
1293 }
1294 if (!kUseTR) {
1295 if(iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "iPWG4QATPCMC disabled if not reading track references");
1296 iPWG4PtQAMC = 0;
1297 }
1298 if (iJETAN){
1299 iESDfilter=1;
1300 }
1301 if (!iESDfilter){
1302 kUseKinefilter = kFALSE;
1303 kUseMuonfilter = kFALSE;
1304 }
1305 if(!iJETAN){
1306 iPWG4JetSpectrum = iPWG4UE = iPWG4CorrectionsUE = iPWG4ThreeJets = iPWG4QGSep = iDIJETAN = 0;
1307 }
1308 }
1309 iPWG4JetTasks = iPWG4JetServices||iPWG4JetSpectrum||iPWG4UE||iPWG4LeadingUE||iPWG4PtQAMC||iPWG4PtSpectra||iPWG4PtQATPC||iPWG4Cosmics||iPWG4ThreeJets||iPWG4QGSep||iPWG4JetChem||iPWG4Minijet||iPWG4Fragmentation;
1310 iPWG4PartCorrLibs = iPWG4PartCorr||iPWG4Tagged||iPWG4CaloQA;
1311 iPWG4GammaConvLib = iPWG4GammaConv||iPWG4CaloConv;
1312
1313
1314 iEMCUtilLibs = iPWG4PartCorrLibs||iPWG4JCORRAN||iPWG4GammaConvLib;
1315 iJETANLib = iPWG4JetTasks||iJETAN||iDIJETAN;
1316
1317 if (iESDfilter) {iAODhandler=1;}
1318 if (kUseKinefilter && !kUseMC) kUseKinefilter = kFALSE;
1319 if (kUseAODTags && !iAODhandler) kUseAODTags = kFALSE;
1320
1321
1322
1323}
1324
1325//______________________________________________________________________________
1326Bool_t Connect(const char *mode) {
1327// Connect <username> to the back-end system.
1328 Int_t imode = -1;
1329 if (!strcmp(mode, "LOCAL")) imode = 0;
1330 if (!strcmp(mode, "PROOF")) imode = 1;
1331 if (!strcmp(mode, "GRID")) imode = 2;
1332 TString username = gSystem->Getenv("alien_API_USER");
1333 switch (imode) {
1334 case 0:
1335 break;
1336 case 1:
1337 if (!username.Length()) {
1338 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1339 1. Have called: alien-token-init <username>\n \
1340 2. Have called: >source /tmp/gclient_env_$UID");
1341 return kFALSE;
1342 }
1343 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
1344 username.Data(), kProofCluster.Data());
1345 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
1346// TProof::Open(Form("%s@%s:31093", username.Data(), kProofCluster.Data()));
1347 TProof::Open(Form("%s@%s", username.Data(), kProofCluster.Data()));
1348 if (!gProof) {
1349 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
1350 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
1351 return kFALSE;
1352 }
1353 if(kProofClearPackages)gProof->ClearPackages();
1354
1355 if(kProofSaveToAlien){
1356 TGrid::Connect("alien://");
1357 if (gGrid) {
1358 TString homedir = gGrid->GetHomeDirectory();
1359 TString workdir = homedir + kTrainName;
1360 if (!gGrid->Cd(workdir)) {
1361 gGrid->Cd(homedir);
1362 if (gGrid->Mkdir(workdir)) {
1363 gGrid->Cd(kTrainName);
1364 ::Info("AnalysisTrainPWG4Jets::Connect()", "Directory %s created", gGrid->Pwd());
1365 }
1366 }
1367 gGrid->Mkdir("proof_output");
1368 gGrid->Cd("proof_output");
1369 kProofOutdir = Form("alien://%s", gGrid->Pwd());
1370 }
1371 }
1372 break;
1373 case 2:
1374 if (!username.Length()) {
1375 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1376 1. Have called: alien-token-init <username>\n \
1377 2. Have called: >source /tmp/gclient_env_$UID");
1378 return kFALSE;
1379 }
1380 if (kPluginUse && !gSystem->Getenv("alien_CLOSE_SE")) {
1381 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode),
1382 "When using the AliEn plugin it is preferable to define the \
1383 variable alien_CLOSE_SE in your environment.");
1384 return kFALSE;
1385 }
1386 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to AliEn ...",
1387 username.Data());
1388 TGrid::Connect("alien://");
1389 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
1390 break;
1391 default:
1392 ::Error("AnalysisTrainPWG4Jets.C::Connect", "Unknown run mode: %s", mode);
1393 return kFALSE;
1394 }
1395 ::Info("AnalysisTrainPWG4Jets.C::Connect","Connected in %s mode", mode);
1396 return kTRUE;
1397}
1398
1399//______________________________________________________________________________
1400Bool_t LoadCommonLibraries(const char *mode)
1401{
1402 if (!gSystem->Getenv("ALICE_ROOT")) {
1403 ::Error("AnalysisTrainPWG4Jets.C", "Analysis train requires that ALICE_ROOT is set to pick up Configurations");
1404 return kFALSE;
1405 }
1406
1407 // Load common analysis libraries.
1408 Int_t imode = -1;
1409 if (!strcmp(mode, "LOCAL")) imode = 0;
1410 if (!strcmp(mode, "PROOF")) imode = 1;
1411 if (!strcmp(mode, "GRID")) imode = 2;
1412 Bool_t success = kTRUE;
1413 // ROOT libraries
1414 gSystem->Load("libTree.so");
1415 gSystem->Load("libGeom.so");
1416 gSystem->Load("libVMC.so");
1417 gSystem->Load("libPhysics.so");
1418
1419 // Load framework classes. Par option ignored here.
1420 switch (imode) {
1421 case 0:
1422 case 2:
1423 if (kUseCPAR) {
1424 success &= LoadLibrary("STEERBase", mode, kTRUE);
1425 success &= LoadLibrary("ESD", mode, kTRUE);
1426 success &= LoadLibrary("AOD", mode, kTRUE);
1427 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
1428 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
1429 success &= LoadLibrary("ROOTFILES", mode, kTRUE);
1430 // success &= LoadLibrary("EventMixing", mode,kTRUE);
1431 success &= LoadLibrary("CORRFW", mode, kTRUE);
1432 } else {
1433 success &= LoadLibrary("libSTEERBase.so", mode);
1434 success &= LoadLibrary("libESD.so", mode);
1435 success &= LoadLibrary("libAOD.so", mode);
1436 success &= LoadLibrary("libANALYSIS.so", mode);
1437 success &= LoadLibrary("libANALYSISalice.so", mode);
1438 // success &= LoadLibrary("libEventMixing.so", mode);
1439 success &= LoadLibrary("libCORRFW.so", mode);
1440 gROOT->ProcessLine(".include $ALICE_ROOT/include");
1441 }
1442 break;
1443 case 1:
1444 Int_t ires = -1;
1445 if (kProofUseAFPAR && !gSystem->AccessPathName(kProofAFversion)) ires = gProof->UploadPackage(kProofAFversion);
1446 if (ires < 0) {
1447 success &= LoadLibrary("STEERBase", mode);
1448 success &= LoadLibrary("ESD", mode);
1449 success &= LoadLibrary("AOD", mode);
1450 success &= LoadLibrary("ANALYSIS", mode);
1451 success &= LoadLibrary("ANALYSISalice", mode);
1452 success &= LoadLibrary("EventMixing", mode);
1453 success &= LoadLibrary("CORRFW", mode);
1454 } else {
1455 ires = gProof->EnablePackage(kProofAFversion);
1456 if (ires<0) success = kFALSE;
1457 success &= LoadLibrary("CORRFW", mode);
1458 }
1459 break;
1460 default:
1461 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
1462 return kFALSE;
1463 }
1464 if (success) {
1465 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
1466 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
1467 gSystem->GetIncludePath());
1468 } else {
1469 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: FAILED");
1470 }
1471
1472 return success;
1473}
1474
1475//______________________________________________________________________________
1476Bool_t LoadAnalysisLibraries(const char *mode)
1477{
1478// Load common analysis libraries.
1479 Bool_t success = kTRUE;
1480 if (useTender) {
1481 if (!LoadLibrary("TENDER", mode, kTRUE) ||
1482 !LoadLibrary("TENDERSupplies", mode, kTRUE)) return kFALSE;
1483 }
1484 if (iESDfilter) {
1485 /*
1486 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
1487 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
1488 */
1489 }
1490 // JETAN
1491 if (iJETANLib) {
1492 // this part needs some rework in case we do not need the fastjed finders for processing
1493 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
1494 if (!strcmp(mode, "PROOF")){
1495 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libCGAL.so\"\)", kTRUE);
1496 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libfastjet.so\"\)", kTRUE);
1497 // problem when loading siscone copiled with different gcc version??
1498 // gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libsiscone.so\"\)", kTRUE);
1499 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libSISConePlugin.so\"\)", kTRUE);
1500 }
1501 if(!kUsePAR){
1502 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
1503 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
1504 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
1505 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
1506 }
1507 else{
1508 // par files plus FASTJET needs some extra work... need to change
1509 // the loading sequence in the auto generated .C file
1510 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
1511 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
1512 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
1513 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
1514 }
1515 if (!LoadLibrary("FASTJETAN", mode, kTRUE)) return kFALSE;
1516 }
1517 if(iPWG4JetTasks){
1518 if (!LoadLibrary("PWG4JetTasks", mode, kTRUE)) return kFALSE;
1519 }
1520
1521 if(iPWG1QASym){
1522 if (!LoadSource(Form("%s/PWG1/AliAnalysisTaskQASym.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1523 }
1524 if(iPWG4TmpSourceSara){
1525 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
1526 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskEta.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1527 }
1528
1529 if(iEMCUtilLibs){
1530 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
1531 !LoadLibrary("PHOSUtils", mode, kTRUE)) return kFALSE;
1532 }
1533
1534 if (iPWG4PartCorrLibs) {
1535 if (!LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
1536 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
1537 }
1538 if(iPWG4JCORRAN){
1539 // PWG4 particle correlations
1540 if(!LoadLibrary("PWG4JCORRAN",mode,kTRUE))return kFALSE;
1541 }
1542 if (iPWG4JetCorr) {
1543 if (!LoadLibrary("PWG4JetCorrel", mode, kTRUE)) return kFALSE;
1544 }
1545 if (iPWG4omega3pi) {
1546 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
1547 }
1548 if (iPWG4GammaConvLib) {
1549 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
1550 }
1551
1552 ::Info("AnalysisTrainPWG4Jets.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
1553 return kTRUE;
1554}
1555
1556//______________________________________________________________________________
1557Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
1558{
1559// Load a module library in a given mode. Reports success.
1560 Int_t imode = -1;
1561 Int_t result;
1562 TString smodule(module);
1563 if (!strcmp(mode, "LOCAL")) imode = 0;
1564 if (!strcmp(mode, "PROOF")) imode = 1;
1565 if (!strcmp(mode, "GRID")) imode = 2;
1566 TString mod(module);
1567 if (!mod.Length()) {
1568 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Empty module name");
1569 return kFALSE;
1570 }
1571 // If a library is specified, just load it
1572 if (smodule.EndsWith(".so")) {
1573 mod.Remove(mod.Index(".so"));
1574 result = gSystem->Load(mod);
1575 if (result < 0) {
1576 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load library %s", module);
1577 return kFALSE;
1578 }
1579 if (rec) anaLibs += Form("%s.so ",mod.Data());
1580 if (rec) anaLibsExtra += Form("%s.so ",mod.Data());
1581 return kTRUE;
1582 }
1583 // Check if the library is already loaded
1584 if (strlen(gSystem->GetLibraries(Form("%s.so", module), "", kFALSE)) > 0)
1585 return kTRUE;
1586 switch (imode) {
1587 case 0:
1588 case 2:
1589 if (kUsePAR) {
1590 result = SetupPar(module);
1591 if (rec) anaPars += Form("%s.par ", module);
1592 } else {
1593 result = gSystem->Load(Form("lib%s.so", module));
1594 if (rec) anaLibs += Form("lib%s.so ", module);
1595 }
1596 break;
1597 case 1:
1598 if(!gSystem->AccessPathName(module)){
1599 ::Info("AnalysisTrainPWG4Jets.C::LoadLibrary", "Removing directory %s",module);
1600 gSystem->Exec(Form("rm -rf %s",module));
1601 }
1602 result = gProof->UploadPackage(module);
1603 if (result<0) {
1604 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
1605 if (result<0) {
1606 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
1607 return kFALSE;
1608 }
1609 }
1610 result = gProof->EnablePackage(module);
1611 break;
1612 default:
1613 return kFALSE;
1614 }
1615 if (result < 0) {
1616 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load module %s", module);
1617 return kFALSE;
1618 }
1619 return kTRUE;
1620}
1621
1622
1623
1624//______________________________________________________________________________
1625Bool_t LoadSource(const char *source, const char *mode, Bool_t rec=kFALSE)
1626{
1627// Load a module library in a given mode. Reports success.
1628 Int_t imode = -1;
1629 Int_t result = -1;
1630 if (!strcmp(mode, "LOCAL")) imode = 0;
1631 if (!strcmp(mode, "PROOF")) imode = 1;
1632 if (!strcmp(mode, "GRID")) imode = 2;
1633 TString ssource(source);
1634 TString basename = gSystem->BaseName(ssource.Data());
1635 if (!ssource.Length()) {
1636 ::Error("AnalysisTrainPWG4Jets.C::LoadSource", "Empty task name");
1637 return kFALSE;
1638 }
1639 // we have a source code so compile it
1640 if (ssource.EndsWith(".cxx")) {
1641 // need to copy it here other wise the path is also used on grid...
1642 ssource.Remove(ssource.Index(".cxx"));
1643 basename.Remove(basename.Index(".cxx"));
1644 Printf("LoadSources:: Copying... path %s{cxx,h}",ssource.Data());
1645 gSystem->Exec(Form("cp %s.cxx . ",ssource.Data()));
1646 gSystem->Exec(Form("cp %s.h . ",ssource.Data()));
1647 // Path to code
1648 // only needed for local compilation, in grid and proof mode
1649 // the task headers are uploaded
1650 // path.Remove(path.Index(gSystem->BaseName(path.Data())));
1651 // Printf("LoadSources:: Including path %s",path.Data());
1652 // if(path.Length()>0)gROOT->ProcessLine(Form(".include %s",path.Data()));
1653 Printf("LoadSources:: Loading... path %s",basename.Data());
1654 switch (imode) {
1655 case 0:
1656 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
1657 break;
1658 case 1:
1659 result = gProof->LoadMacro(Form("%s.cxx++g",basename.Data()));
1660 break;
1661 case 2:
1662 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
1663 if (rec){
1664 // what we want to compile
1665 anaSources += Form("%s.cxx ",basename.Data());
1666 // what we need as input...
1667 anaLibs += Form("%s.cxx %s.h ",basename.Data(),basename.Data());
1668 }
1669 break;
1670 default:
1671 return kFALSE;
1672 }
1673 }
1674 if (result < 0) {
1675 ::Error("AnalysisTrainPWG4Jets.C::LoadSources", "Could not load source %s", source);
1676 return kFALSE;
1677 }
1678 return kTRUE;
1679}
1680
1681
1682//______________________________________________________________________________
1683TChain *CreateChain(const char *mode, const char *plugin_mode)
1684{
1685// Create the input chain
1686 Int_t imode = -1;
1687 if (!strcmp(mode, "LOCAL")) imode = 0;
1688 if (!strcmp(mode, "PROOF")) imode = 1;
1689 if (!strcmp(mode, "GRID")) imode = 2;
1690 TChain *chain = NULL;
1691 // Local chain
1692 switch (imode) {
1693 case 0:
1694 if (iAODanalysis) {
1695 if (!kLocalXMLDataset.Length()) {
1696 // Local AOD
1697 chain = new TChain("aodTree");
1698 TString line;
1699 ifstream in;
1700 in.open(kLocalDataList.Data());
1701 Int_t ic = 0;
1702 while (in.good()) {
1703 in >> line;
1704 if (line.Length() == 0) continue;
1705 Printf("%d adding %s",ic,line.Data());
1706 chain->Add(line.Data());
1707 ic++;
1708 }
1709 } else {
1710 // Interactive AOD
1711 chain = CreateChainSingle(kLocalXMLDataset, "aodTree");
1712 }
1713 } else {
1714 if (!kLocalXMLDataset.Length()) {
1715 // Local ESD
1716 chain = new TChain("esdTree");
1717 TString line;
1718 ifstream in;
1719 in.open(kLocalDataList.Data());
1720 while (in.good()) {
1721 in >> line;
1722 if (line.Length() == 0) continue;
1723 cout << " line = " << line << endl;
1724 chain->Add(line.Data());
1725 }
1726 } else {
1727 // Interactive ESD
1728 chain = CreateChainSingle(kLocalXMLDataset, "esdTree");
1729 }
1730 }
1731 break;
1732 case 1:
1733 break;
1734 case 2:
1735 if (kPluginUse) {
1736// AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1737// AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1738 } else {
1739 TString treeName = "esdTree";
1740 if (iAODanalysis) treeName = "aodTree";
1741 chain = CreateChainSingle("wn.xml", treeName);
1742 }
1743 break;
1744 default:
1745 }
1746 if (chain && chain->GetNtrees()) return chain;
1747 return NULL;
1748}
1749
1750//______________________________________________________________________________
1751TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
1752{
1753 printf("*******************************\n");
1754 printf("*** Getting the ESD Chain ***\n");
1755 printf("*******************************\n");
1756 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
1757
1758 if (!myCollection) {
1759 ::Error("AnalysisTrainPWG4Jets.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
1760 return NULL ;
1761 }
1762
1763 TChain* chain = new TChain(treeName);
1764 myCollection->Reset() ;
1765 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
1766 chain->ls();
1767 return chain;
1768}
1769
1770//______________________________________________________________________________
1771Int_t SetupPar(char* pararchivename)
1772{
1773 if (!pararchivename || !strlen(pararchivename)) return -1;
1774 char processline[1024];
1775 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
1776 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
1777 ::Info("AnalysisTrainPWG4Jets.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
1778 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
1779 Form("%s.par",pararchivename));
1780 } else {
1781 ::Error("AnalysisTrainPWG4Jets.C::SetupPar", "Cannot find %s.par", pararchivename);
1782 return -1;
1783 }
1784 }
1785 if (kPluginUse && kSaveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, kTrainName.Data()));
1786 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
1787
1788 TString ocwd = gSystem->WorkingDirectory();
1789 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
1790
1791 // check for BUILD.sh and execute
1792 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
1793 printf("*******************************\n");
1794 printf("*** Building PAR archive ***\n");
1795 printf("*******************************\n");
1796 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
1797 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
1798 return -1;
1799 }
1800 }
1801
1802 // check for SETUP.C and execute
1803 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
1804 printf("*******************************\n");
1805 printf("*** Setup PAR archive ***\n");
1806 printf("*******************************\n");
1807 gROOT->Macro("PROOF-INF/SETUP.C");
1808 }
1809 if (!gSystem->ChangeDirectory(ocwd.Data())){
1810 Error("Change back directory",Form("Cannot change to %s",ocwd.Data()));
1811 return -1;
1812 }
1813 return 0;
1814}
1815
1816//______________________________________________________________________________
1817AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
1818{
1819// Check if user has a valid token, otherwise make one. This has limitations.
1820// One can always follow the standard procedure of calling alien-token-init then
1821// source /tmp/gclient_env_$UID in the current shell.
1822// if (!AliAnalysisGrid::CreateToken()) return NULL;
1823 AliAnalysisAlien *plugin = new AliAnalysisAlien();
1824// Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
1825 plugin->SetRunMode(plugin_mode);
1826 if (kPluginUseProductionMode) plugin->SetProductionMode();
1827 plugin->SetJobTag(kJobTag);
1828 plugin->SetNtestFiles(1);
1829// plugin->SetPreferedSE("ALICE::NIHAM::File");
1830// Set versions of used packages
1831 plugin->SetAPIVersion("V1.1x");
1832 // plugin->SetAPIVersion("V1.0x");
1833// plugin->SetAPIVersion("V2.4");
1834 plugin->SetROOTVersion(kPluginRootVersion);
1835 plugin->SetAliROOTVersion(kPluginAliRootVersion);
1836// Declare input data to be processed.
1837// Method 1: Create automatically XML collections using alien 'find' command.
1838// Define production directory LFN
1839 plugin->SetGridDataDir(kGridDatadir.Data());
1840// Set data search pattern
1841 if (iAODanalysis) plugin->SetDataPattern(" *AliAOD.Jets.root");
1842 // else plugin->SetDataPattern(Form(" %s/*/*ESD.tag.root",kGridPassPattern.Data()));
1843 else plugin->SetDataPattern(Form(" %s/*/*AliESDs.root",kGridPassPattern.Data()));
1844// ...then add run numbers to be considered
1845// plugin->SetRunRange(kGridRunRange[0], kGridRunRange[1]);
1846 for (Int_t i=kGridRunRange[0]; i<=kGridRunRange[1]; i++) {
1847 Printf("AnalysisTrainPWG4Jets Adding run number %s", Form(kGridRunPattern.Data(),i));
1848 plugin->AddRunNumber(Form(kGridRunPattern.Data(),i));
1849 }
1850
1851 if(kGridLocalRunList.Length()>0){
1852 ifstream in1;
1853 in1.open(kGridLocalRunList.Data());
1854 int iRun;
1855 int icount = 0;
1856 /*
1857 char c;
1858 char cLine[250];
1859 while(!in1.eof()){
1860 c = in1.get();
1861 if ( (c >= '0') && (c <= '9') )
1862 {
1863 in1.putback (c)s;
1864 in1>>iRun;
1865 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1866 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1867 }
1868 else
1869 {
1870 in1.putback (c);
1871 in1.getline(cLine,250);
1872
1873 }
1874 }
1875 */
1876
1877 Int_t nRun = 0;
1878
1879 // just use run numbers, negatives will be excluded
1880 while(in1>>iRun){
1881 if(iRun>=0){
1882 if(iRun>=0&&nRun>=kGridOffsetRunFromList&&(nRun<kGridMaxRunsFromList)){
1883 Printf("AnalysisTrainPWG4Jets Adding run number from File %d: %s",nRun,Form(kGridRunPattern.Data(),iRun));
1884 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1885
1886 }
1887 else{
1888 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d: %d",nRun, iRun);
1889 }
1890 nRun++;
1891 }
1892 else{
1893 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d: %d",nRun, iRun);
1894 }
1895 }
1896 }
1897
1898// Method 2: Declare existing data files (raw collections, xml collections, root file)
1899// If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
1900// XML collections added via this method can be combined with the first method if
1901// the content is compatible (using or not tags)
1902// plugin->AddDataFile("tag.xml");
1903// plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
1904// Define alien work directory where all files will be copied. Relative to alien $HOME.
1905 TString alien_workdir = "";
1906
1907 if (iAODanalysis) alien_workdir += "analysisAOD";
1908 else alien_workdir += "analysisESD";
1909 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1910 plugin->SetGridWorkingDir(alien_workdir.Data());
1911
1912 // Declare alien output directory. Relative to working directory.
1913 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1914 plugin->SetGridOutputDir(kGridOutdir);
1915
1916 // Add external packages
1917 if (iJETAN||iDIJETAN) {
1918 plugin->AddExternalPackage("boost::v1_43_0");
1919 plugin->AddExternalPackage("cgal::v3.6");
1920 plugin->AddExternalPackage("fastjet::v2.4.2");
1921 }
1922
1923
1924 // set extra libs before par file compilation
1925 anaLibs += kGridExtraFiles;
1926 anaLibs = anaLibs.Strip();
1927 Printf("anaLibs %s",anaLibs.Data());
1928 Printf("anaLibsExtra %s",anaLibsExtra.Data());
1929
1930 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs.Data());
1931 if (anaLibsExtra.Length()) plugin->SetAdditionalRootLibs(anaLibsExtra.Data());
1932
1933 TString ana_sources = "";
1934 TString ana_add = "";
1935 if (kUsePAR && anaPars.Length()) {
1936 printf("%s\n", anaPars.Data());
1937 TObjArray *arr;
1938 TObjString *objstr;
1939 arr = anaPars.Tokenize(" ");
1940 TIter next(arr);
1941 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
1942 delete arr;
1943 }
1944
1945// Declare the analysis source files names separated by blancs. To be compiled runtime
1946// using ACLiC on the worker nodes.
1947 ana_sources = anaSources.Strip();
1948// Declare all libraries (other than the default ones for the framework. These will be
1949// loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
1950
1951 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
1952 plugin->SetExecutableCommand(kPluginExecutableCommand.Data());
1953 // Declare the output file names separated by blancs.
1954 // (can be like: file.root or file.root@ALICE::Niham::File)
1955 plugin->SetMergeExcludes(kGridMergeExclude);
1956 plugin->SetMaxMergeFiles(kGridMaxMergeFiles);
1957 plugin->SetNrunsPerMaster(kGridRunsPerMaster);
1958 plugin->SetMergeViaJDL(kPluginMergeViaJDL);
1959 // Use fastread option
1960 plugin->SetFastReadOption(kPluginFastReadOption);
1961 // UseOverwrite mode
1962 plugin->SetOverwriteMode(kPluginOverwriteMode);
1963 // Optionally define the files to be archived.
1964 // plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
1965 plugin->SetOutputToRunNo(kPluginOutputToRunNumber); // write the output to subdirs named after run number
1966
1967 // Put default output files to archive
1968 TString listhists = "";
1969 TString listaods = "";
1970 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1971 TIter next(mgr->GetOutputs());
1972 AliAnalysisDataContainer *output;
1973 while ((output=(AliAnalysisDataContainer*)next())) {
1974 const char *filename = output->GetFileName();
1975 if (!(strcmp(filename, "default"))) {
1976 if (!mgr->GetOutputEventHandler()) continue;
1977 filename = mgr->GetOutputEventHandler()->GetOutputFileName();
1978 if (listaods.Length()) listaods += " ";
1979 listaods += filename;
1980 } else {
1981 if(!listhists.Contains(filename)){
1982 if (listhists.Length()) listhists += " ";
1983 listhists += filename;
1984 }
1985 }
1986 }
1987
1988 if (mgr->GetExtraFiles().Length()) {
1989 if (listaods.Length()) listaods += " ";
1990 listaods += mgr->GetExtraFiles();
1991 }
1992
1993 // if we do not fill the aod we do not need to store it
1994 // kGridMergeExclude = listaods;
1995
1996 if(kSaveAOD>=0){
1997 TString outputFiles = "";
1998 outputFiles += mgr->GetExtraFiles();
1999 if (listhists.Length()) outputFiles += " ";
2000 outputFiles += listhists;
2001 plugin->SetDefaultOutputs(kFALSE);
2002 Printf("%s:%d Starting with the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
2003 // remove
2004 // no harm done when we try to remove something that is not there :)
2005 if(!(kSaveAOD&(1<<0))){
2006 outputFiles.ReplaceAll("AliAOD.root ","");
2007 listaods.ReplaceAll("AliAOD.root ","");
2008 }
2009 if(!(kSaveAOD&(1<<1))){
2010 if(kDeltaAODJetName.Length())outputFiles.ReplaceAll(kDeltaAODJetName.Data(),"");
2011 if(kDeltaAODJetName.Length())listaods.ReplaceAll(kDeltaAODJetName.Data(),"");
2012
2013 }
2014 if(!(kSaveAOD&(1<<2))){
2015 if(kDeltaAODPartCorrName.Length())outputFiles.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
2016 if(kDeltaAODPartCorrName.Length())listaods.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
2017 }
2018 if(!(kSaveAOD&(1<<3))){
2019 if(kDeltaAODJCORRANName.Length())outputFiles.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
2020 if(kDeltaAODJCORRANName.Length())listaods.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
2021 }
2022
2023 //
2024 plugin->SetDefaultOutputs(kFALSE);
2025 Printf("%s:%d Saving the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
2026 plugin->SetOutputFiles(outputFiles.Data());
2027 }
2028
2029 TString outputArchive;
2030 outputArchive = Form("log_archive.zip:std*@%s","disk=1");
2031 listaods.ReplaceAll(" ", ",");
2032 listhists.ReplaceAll(" ", ",");
2033 if (listhists.Length()){
2034 outputArchive += " ";
2035 outputArchive += "root_archive.zip:";
2036 outputArchive += listhists;
2037 if (listaods.Length()){
2038 outputArchive += ",";
2039 outputArchive += listaods;
2040 }
2041 outputArchive += Form("@%s", kGridOutputStorages.Data());
2042 }
2043 else{
2044
2045 if (listaods.Length()){
2046 // we have only aod'ish output
2047 outputArchive += " ";
2048 outputArchive += "root_archive.zip:";
2049 outputArchive += listaods;
2050 outputArchive += Form("@%s", kGridOutputStorages.Data());
2051 }
2052 else{
2053 // no other outputs than std..
2054 ::Fatal("AnalysisTrainPWG4Jets", "No task output !");
2055 }
2056 }
2057
2058 plugin->SetDefaultOutputs(kFALSE);
2059 plugin->SetOutputArchive(outputArchive);
2060
2061
2062 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
2063 plugin->SetAnalysisMacro(Form("%s.C", kTrainName.Data()));
2064 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
2065 plugin->SetSplitMaxInputFileNumber(kGridFilesPerJob);
2066 // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
2067 // plugin->SetMaxInitFailed(5);
2068 // Optionally resubmit threshold.
2069 // plugin->SetMasterResubmitThreshold(90);
2070 // Optionally set time to live (default 30000 sec)
2071 plugin->SetTTL(54000); // 15h...
2072 // Optionally set input format (default xml-single)
2073 plugin->SetInputFormat("xml-single");
2074 // Optionally modify the name of the generated JDL (default analysis.jdl)
2075 plugin->SetJDLName(Form("%s.jdl", kTrainName.Data()));
2076 // Optionally modify the executable name (default analysis.sh)
2077 plugin->SetExecutable(Form("%s.sh", kTrainName.Data()));
2078 // Optionally modify job price (default 1)
2079 plugin->SetPrice(1);
2080 // Optionally modify split mode (default 'se')
2081 plugin->SetSplitMode("se");
2082 return plugin;
2083}
2084
2085//______________________________________________________________________________
2086void WriteConfig()
2087{
2088// Write train configuration in a file. The file name has the format:
2089// train_[trainName]_ddMonthyyyy_time.C
2090 if (kUseDate) {
2091 gSystem->Exec("date +%d%b%Y_%Hh%M > date.tmp");
2092 ifstream fdate("date.tmp");
2093 if (!fdate.is_open()) {
2094 ::Error("AnalysisTrainPWG4Jets.C::Export","Could not generate file name");
2095 return;
2096 }
2097 const char date[64];
2098 fdate.getline(date,64);
2099 fdate.close();
2100 gSystem->Exec("rm date.tmp");
2101 kTrainName = Form("train_%s_%s", kTrainName.Data(), date);
2102 } else {
2103 kTrainName = Form("train_%s", kTrainName.Data());
2104 }
2105 TString cdir = gSystem->WorkingDirectory();
2106 gSystem->MakeDirectory(kTrainName);
2107 gSystem->ChangeDirectory(kTrainName);
2108 ofstream out;
2109 out.open(Form("%sConfig.C",kTrainName.Data()), ios::out);
2110 if (out.bad()) {
2111 ::Error("AnalysisTrainPWG4Jets.C::Export", "Cannot open ConfigTrain.C for writing");
2112 return;
2113 }
2114 out << "{" << endl;
2115 out << " kTrainName = " << "\"" << kTrainName.Data() << "\";" << endl;
2116 out << " kProofCluster = " << "\"" << kProofCluster.Data() << "\";" << endl;
2117 out << " kProofUseAFPAR = " << kProofUseAFPAR << ";" << endl;
2118 if (kProofUseAFPAR)
2119 out << " kProofAFversion = " << kProofAFversion.Data() << ";" << endl;
2120 out << " kProofDataSet = " << "\"" << kProofDataSet.Data() << "\";" << endl;
2121 out << " kPluginUse = " << kPluginUse << ";" << endl;
2122 out << " kUsePAR = " << kUsePAR << ";" << endl;
2123 out << " kUseCPAR = " << kUseCPAR << ";" << endl;
2124 out << " kPluginRootVersion = " << "\"" << kPluginRootVersion.Data() << "\";" << endl;
2125 out << " kPluginAliRootVersion = " << "\"" << kPluginAliRootVersion.Data() << "\";" << endl;
2126 out << " kGridDatadir = " << "\"" << kGridDatadir.Data() << "\";" << endl;
2127 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
2128 out << " kGridOutdir = " << "\"" << kGridOutdir.Data() << "\";" << endl;
2129 out << " kGridMaxMergeFiles = " << kGridMaxMergeFiles << ";" << endl;
2130 out << " kGridMergeExclude = " << "\"" << kGridMergeExclude.Data() << "\";" << endl;
2131 out << " kGridRunsPerMaster = " << kGridRunsPerMaster << ";" << endl;
2132 out << " kGridFilesPerJob = " << kGridFilesPerJob << ";" << endl;
2133 out << " kGridRunRange[0] = " << kGridRunRange[0] << ";" << endl;
2134 out << " kGridRunRange[1] = " << kGridRunRange[1] << ";" << endl;
2135 out << " kUseDebug = " << kUseDebug << ";" << endl;
2136 out << " kUseMC = " << kUseMC << ";" << endl;
2137 out << " kUseESDTags = " << kUseESDTags << ";" << endl;
2138 out << " kUseKinefilter = " << kUseKinefilter << ";" << endl;
2139 out << " kUseTR = " << kUseTR << ";" << endl;
2140 out << " kUseAODTags = " << kUseAODTags << ";" << endl;
2141 out << " kSaveTrain = " << "kFALSE;" << endl << endl;
2142 out << " // Analysis modules" << endl;
2143 out << " iAODanalysis = " << iAODanalysis << ";" << endl;
2144 out << " iAODhandler = " << iAODhandler << ";" << endl;
2145 out << " iESDfilter = " << iESDfilter << ";" << endl;
2146 out << " iJETAN = " << iJETAN << ";" << endl;
2147 out << "// Configuration fot the wagons" << endl;
2148 out << "}" << endl;
2149 ::Info("AnalysisTrainPWG4Jets.C::WriteConfig", "Train configuration wrote to file %s", Form("config_%s.C", kTrainName.Data()));
2150 gSystem->ChangeDirectory(cdir);
2151}
2152
2153//______________________________________________________________________________
2154Bool_t LoadConfig(const char *filename)
2155{
2156// Read train configuration from file
2157 if (gSystem->AccessPathName(filename)) {
2158 ::Error("AnalysisTrainPWG4Jets.C::LoadConfig", "Config file name not found");
2159 return kFALSE;
2160 }
2161 gROOT->ProcessLine(Form(".x %s", filename));
2162 ::Info("AnalysisTrainPWG4Jets.C::LoadConfig", "Train configuration loaded from file %s", filename);
2163 return kTRUE;
2164}
2165
2166Bool_t PatchJDL(){
2167 Printf(">>> Patching JDL");
2168 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
2169 AliAnalysisAlien* gridHandler = (AliAnalysisAlien*)mgr->GetGridHandler();
2170 TGridJDL *jdl = gridHandler->GetGridJDL();
2171 if(iJETAN)jdl->AddToPackages("fastjet","v2.4.0");
2172 gridHandler->WriteJDL(kFALSE);
2173 Printf("<<< Patching JDL");
2174 return kTRUE;
2175}
2176
2177Bool_t PatchAnalysisMacro(){
2178 Printf(">>> Patching AnalysisMacro");
2179 gSystem->Exec(Form("mv %s.C %s.C_tmp",kTrainName.Data(),kTrainName.Data()));
2180
2181 ifstream in1;
2182 in1.open(Form("%s.C_tmp", kTrainName.Data()));
2183 char cLine[250];
2184 TString st;
2185 while(in1.getline(cLine,250)){
2186 st += cLine;
2187 st += "\n";
2188 }
2189 Int_t index= -1;
2190 index = st.Index("gSystem->Load(\"libPhysics\");");
2191 index += strlen("gSystem->Load(\"libPhysics\");");
2192 /*
2193 TObjArray *arr;
2194 TObjString *objstr;
2195 arr = anaLibs.Tokenize(" ");
2196 TIter next(arr);
2197
2198 add += "\n\n // added by CKB \n";
2199 while ((objstr=(TObjString*)next())){
2200 if(objstr->GetString().Contains("PWG3"))continue;
2201 if(objstr->GetString().EndsWith(".so"))add += Form("gSystem->Load(\"%s\");\n",objstr->GetString().Data());
2202 }
2203 delete arr;
2204 */
2205 // add += Form("AliLog::SetGlobalLogLevel(%d);\n",AliLog::GetGlobalLogLevel());
2206 TString add = "";
2207
2208 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2209 add += "\n\n // added by CKB \n";
2210 if(kErrorIgnoreLevel>0)add += Form("gErrorIgnoreLevel = %d;\n",kErrorIgnoreLevel);
2211 add += "\n gSystem->AddIncludePath(\"./\"); \n";
2212 add += "\n gSystem->SetFPEMask(); \n";
2213
2214
2215 if(gGrid&&kPluginAliRootVersion.Length()==0){
2216 /*
2217 add += "\n // Dirty hack for TRD reference data \n";
2218 add += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2219 add += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2220 add += "\"); \n";
2221 */
2222 }
2223
2224 add += "// BKC \n\n";
2225 st.Insert(index,add.Data());
2226
2227 if(kUseDebug){
2228 // st.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
2229 }
2230
2231 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
2232 index = st.Index("gSystem->AddIncludePath(\"-I$"); // uncommen $ALICE_ROOT include for par files
2233 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2234 st.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2235 }
2236
2237 if(AliLog::GetGlobalLogLevel()==AliLog::kFatal){
2238 index = st.Index("AliLog::SetGlobal"); // ncomment setting of log level, do my own
2239 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2240 st.Insert(index,"AliLog::SetGlobalLogLevel(AliLog::kFatal);// CKB \n // CKB comment out for own setting \n //");
2241 }
2242
2243 ofstream out;
2244 out.open(Form("%s.C", kTrainName.Data()));
2245 if (out.bad()) {
2246 return kFALSE;
2247 }
2248 out << st << endl;
2249 Printf("<<< Patching AnalysisMacro");
2250
2251
2252
2253
2254
2255 Printf(">>> Patching Merge Macro");
2256 gSystem->Exec(Form("mv %s_merge.C %s_merge.C_tmp",kTrainName.Data(),kTrainName.Data()));
2257
2258 ifstream in2;
2259 in2.open(Form("%s_merge.C_tmp", kTrainName.Data()));
2260 TString st2;
2261 while(in2.getline(cLine,250)){
2262 st2 += cLine;
2263 st2 += "\n";
2264 }
2265 index = st2.Index("gSystem->Load(\"libPhysics\");");
2266 index += strlen("gSystem->Load(\"libPhysics\");");
2267 TString add2 = "";
2268 add2 += "\n gSystem->AddIncludePath(\"./\"); \n";
2269 if(gGrid&&kPluginAliRootVersion.Length()==0){
2270 /*
2271 add2 += "\n // Dirty hack for TRD reference data \n";
2272 add2 += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2273 add2 += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2274 add2 += "\"); \n";
2275 */
2276 }
2277 add2 += "// BKC \n\n";
2278 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2279 st2.Insert(index,add.Data());
2280
2281
2282 if(kUseDebug){
2283 // st2.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
2284 }
2285
2286 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
2287 index = st2.Index("gSystem->AddIncludePath(\"-I$"); // uncomment $ALICE_ROOT include for par files
2288 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2289 st2.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2290 }
2291
2292 // do not exclude the extra files from merign, this is done explicitly in this train script
2293 // index = st2.Index("mergeExcludes +="); // uncommen $ALICE_ROOT include for par files
2294 // if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2295 // st2.Insert(index,"// CKB comment out, handled explicitly by the train macro \n //");
2296
2297
2298 ofstream out2;
2299 out2.open(Form("%s_merge.C", kTrainName.Data()));
2300 if (out2.bad()) {
2301 return kFALSE;
2302 }
2303 out2 << st2 << endl;
2304 Printf("<<< Patching Merging Macro");
2305
2306
2307
2308 return kTRUE;
2309
2310}