1 //===================== ANALYSIS TRAIN =========================================
2 // To use: copy this macro to your work directory, modify the global part to match
3 // your needs, then run root.
4 // root[0] .L AnalysisTrain.C
5 // Grid full mode as below (other modes: test, offline, submit, terminate)
6 // root[1] AnalysisTrainNew("grid", "full")
7 // CAF mode (requires root v5-23-02 + aliroot v4-16-Rev08)
8 // root[2] AnalysisTrainNew("proof")
9 // Local mode requires AliESds.root or AliAOD.root in ./data directory
10 // root[3] AnalysisTrainNew("local")
11 // In proof and grid modes, a token is needed and sourcing the produced environment file.
13 // If 'saveTrain' flag is set, the train will generate a directory name and run
14 // in this directory. A configuration file 'ConfigTrain.C' will be generated.
15 // One can replay at any time the train via:
16 // root[1] AnalysisTrainNew(ana_mode, plugin_mode, "train_default_<date>/ConfigTrain.C")
18 //================== TRAIN NAME ============================================
19 TString train_name = "TR006_LHC09a2ESD"; // *CHANGE ME* (no blancs or special characters)
20 TString job_tag = "TR006: ESD+MC analysis -> AOD + delta AOD + histograms"; // *CHANGE ME*
21 //==============================================================================
23 // ### Settings that make sense in PROOF only
24 //==============================================================================
25 TString proof_cluster = "alicecaf.cern.ch";
26 Bool_t useAFPAR = kFALSE; // use AF special par file
27 TString AFversion = "AF-v4-17";
28 // Change CAF dataset here
29 TString proof_dataset = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
30 TString proof_outdir = "";
32 // ### Settings that make sense when using the Alien plugin
33 //==============================================================================
34 Bool_t usePLUGIN = kTRUE; // do not change
35 Bool_t useProductionMode = kTRUE; // use the plugin in production mode
36 // Usage of par files ONLY in grid mode and ONLY if the code is not available
37 // in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
38 // To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
40 Bool_t usePAR = kFALSE; // use par files for extra libs
41 Bool_t useCPAR = kFALSE; // use par files for common libs
42 TString root_version = "v20091109-1"; // *CHANGE ME IF MORE RECENT IN GRID*
43 TString aliroot_version = "v4-18-11-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
44 // Change production base directory here
45 TString alien_datadir = "/alice/sim/PDC_08b/LHC09a2";
46 // AliEn output directory. If blank will become output_<train_name>
47 TString alien_outdir = "/alice/sim/PDC_08b/LHC09a2/AOD";
48 // TString alien_outdir = "";
49 // Number of files merged in a chunk
50 Int_t maxMergeFiles = 20;
51 // Files that should not be merged
52 TString mergeExclude = "AliAOD.root AliAOD.VertexingHF.root AliAOD.Jets.root deltaAODPartCorr.root forward.root";
53 // Make replicas on the storages below
54 TString outputStorages = "ALICE::NIHAM::File,ALICE::CNAF::SE,ALICE::FZK::SE,ALICE::GSI::SE";
55 // Number of runs per master job
56 Int_t nRunsPerMaster = 10;
57 // Maximum number of files per job (gives size of AOD)
58 Int_t nFilesPerJob = 20;
60 Int_t run_range[2] = {80000, 80025}; // LHC09a1 *CHANGE ME*
61 //Int_t run_range[2] = {70000, 70000};
62 // ### Settings that make sense only for local analysis
63 //==============================================================================
64 // Change local xml dataset for local interactive analysis
65 TString local_xmldataset = "";
67 // ### Other flags to steer the analysis
68 //==============================================================================
69 Bool_t useDATE = kFALSE; // use date in train name
70 Bool_t useDBG = kFALSE; // activate debugging
71 Bool_t useMC = kTRUE; // use MC info
72 Bool_t useTAGS = kTRUE; // use ESD tags for selection
73 Bool_t useKFILTER = kTRUE; // use Kinematics filter
74 Bool_t useTR = kTRUE; // use track references
75 Bool_t useCORRFW = kFALSE; // do not change
76 Bool_t useAODTAGS = kFALSE; // use AOD tags
77 Bool_t saveTrain = kTRUE; // save train configuration as:
78 Bool_t saveProofToAlien = kFALSE; // save proof outputs in AliEn
79 // train_[trainName]_ddMonthyyyy_time.C
80 // ### Analysis modules to be included. Some may not be yet fully implemented.
81 //==============================================================================
82 Int_t iAODanalysis = 0; // Analysis on input AOD's
83 Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
84 Int_t iESDfilter = 1; // ESD to AOD filter (barrel + muon tracks)
85 Int_t iMUONcopyAOD = 0; // Task that copies only muon events in a separate AOD (PWG3)
86 Int_t iJETAN = 1; // Jet analysis (PWG4) - needs ESD filter
87 Int_t iPWG4partcorr = 1; // Gamma-hadron correlations task (PWG4)
88 Int_t iPWG4gammaconv = 1; // Gamma conversion analysis (PWG4)
89 Int_t iPWG4omega3pi = 1; // Omega to 3 pi analysis (PWG4)
90 Int_t iPWG3vertexing = 1; // Vertexing HF task (PWG3)
91 Int_t iPWG3hfe = 1; // Electrons analysis (PWG3)
92 Int_t iPWG3d2h = 1; // D0->2 hadrons (PWG3)
93 Int_t iPWG3d0mass = 1; // D0 mass (PWG3D2H)
94 Int_t iPWG3d0massLS = 1; // D0 mass LS (PWG3D2H)
95 Int_t iPWG3dplus = 1; // D+ analysis (PWG3D2H)
96 Int_t iPWG3LSd0 = 1; // LS D0 analysis (PWG3D2H)
97 Int_t iPWG3LSjpsi = 1; // LS J/Psi analysis (PWG3D2H)
98 Int_t iPWG3CFd0 = 1; // CF D0 analysis (PWG3D2H)
99 Int_t iPWG3promptd0 = 1; // prompt D0 analysis (PWG3D2H)
100 Int_t iPWG2femto = 1; // Femtoscopy task (PWG2)
101 Int_t iPWG2spectra = 1; // Spectra tasks (PWG2
102 Int_t iPWG2protons = 1; // Proton-antiproton analysis
103 Int_t iPWG2checkcascade = 1; // Check cascades task
104 Int_t iPWG2perfcascade = 1; // Check performance cascade
105 Int_t iPWG2checkv0 = 1; // Check V0 task
106 Int_t iPWG2strange = 1; // Strangeness task
107 Int_t iPWG2flow = 1; // Flow analysis tasks (PWG2)
108 Int_t iPWG2res = 1; // Resonances task (PWG2)
109 Int_t iPWG2rsneff = 1; // Resonances efficiency
110 Int_t iPWG2kink = 1; // Kink analysis tasks (PWG2)
111 Int_t iPWG2kinkESDMC = 1; // Kink ESD-MC comparison (PWG2)
112 Int_t iPWG2kinklikesign = 1; // Kink like-sign (PWG2)
113 Int_t iPWG2kinkKstarESD = 1; // Kink Kstar ESD (PWG2)
114 Int_t iPWG2kinkKstarMC = 1; // Kink Kstar MC (PWG2)
115 Int_t iPWG2kinkL1520ESD = 1; // Kink L1520 ESD (PWG2)
116 Int_t iPWG2kinkL1520MC = 1; // Kink L1520 MC (PWG2)
117 Int_t iPWG2kinkPhiESD = 1; // Kink resonances Phi ESD (PWG2)
118 Int_t iPWG2kinkPhiMC = 1; // Kink resonances Phi MC (PWG2)
119 Int_t iPWG2evchar = 1; // Event characteristics (PWG2)
120 Int_t iPWG2unicor = 1; // Unicor analysis (PWG2)
121 Int_t iPWG2forward = 1; // FMD analysis (PWG2)
123 // ### Configuration macros used for each module
124 //==============================================================================
125 TString configPWG2femto = "$ALICE_ROOT/PWG2/FEMTOSCOPY/macros/Train/Train3/ConfigFemtoAnalysis.C";
126 //TString configPWG3d2h = "$ALICE_ROOT/PWG3/vertexingHF/ConfigVertexingHF_highmult.C";
127 TString configPWG3d2h = "$ALICE_ROOT/PWG3/vertexingHF/ConfigVertexingHF_highmult.C";
129 TString anaPars = "";
130 TString anaLibs = "";
131 // Function signatures
132 class AliAnalysisAlien;
134 //______________________________________________________________________________
135 void AnalysisTrainNew(const char *analysis_mode="grid",
136 const char *plugin_mode="full",
137 const char *config_file="")
139 // Main analysis train macro. If a configuration file is provided, all parameters
140 // are taken from there but may be altered by CheckModuleFlags.
141 if (strlen(config_file) && !LoadConfig(config_file)) return;
142 TString smode(analysis_mode);
144 // Check compatibility of selected modules
145 CheckModuleFlags(smode);
146 if (saveTrain) WriteConfig();
148 printf("==================================================================\n");
149 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", train_name.Data(),smode.Data());
150 printf("==================================================================\n");
151 printf("= Configuring analysis train for: =\n");
152 if (iAODanalysis) printf("= AOD analysis =\n");
153 else printf("= ESD analysis =\n");
154 if (iESDfilter) printf("= ESD filter =\n");
155 if (iMUONcopyAOD) printf("= MUON copy AOD =\n");
156 if (iJETAN) printf("= Jet analysis =\n");
158 printf("= PWG2 SPECTRA tasks : =\n");
159 if (iPWG2protons) printf("= PWG2 proton-antiproton =\n");
160 if (iPWG2checkcascade) printf("= PWG2 check cascades =\n");
161 if (iPWG2perfcascade) printf("= PWG2 performance cascades =\n");
162 if (iPWG2checkv0) printf("= PWG2 check V0 =\n");
163 if (iPWG2strange) printf("= PWG2 strangeness =\n");
166 printf("= PWG2 femtoscopy =\n");
167 printf(" +++ configured by: %s\n", configPWG2femto.Data());
169 if (iPWG2flow) printf("= PWG2 flow =\n");
170 if (iPWG2res) printf("= PWG2 resonances =\n");
171 if (iPWG2rsneff) printf("= PWG2 resonances efficiency =\n");
173 printf("= PWG2 kink analysis tasks: =\n");
174 if (iPWG2kinkESDMC) printf("= PWG2 ESD-MC kinks =\n");
175 if (iPWG2kinklikesign) printf("= PWG2 kink like-sign analysis =\n");
176 if (iPWG2kinkKstarESD) printf("= PWG2 kink Kstar ESD analysis =\n");
177 if (iPWG2kinkKstarMC) printf("= PWG2 kink Kstar MC analysis =\n");
178 if (iPWG2kinkL1520ESD) printf("= PWG2 kink L1520 ESD analysis =\n");
179 if (iPWG2kinkL1520MC) printf("= PWG2 kink L1520 MC analysis =\n");
180 if (iPWG2kinkPhiESD) printf("= PWG2 kink Phi ESD analysis =\n");
181 if (iPWG2kinkPhiMC) printf("= PWG2 kink Phi MC analysis =\n");
183 if (iPWG2evchar) printf("= PWG2 event characteristics =\n");
184 if (iPWG2unicor) printf("= PWG2 Unicor analysis =\n");
185 if (iPWG2forward) printf("= PWG2 forward: sharing, density, bkg. correction, dNdEta =\n");
186 if (iPWG3vertexing) printf("= PWG3 vertexing =\n");
187 if (iPWG3hfe) printf("= PWG3 electrons =\n");
189 printf("= PWG3 D0->2 hadrons tasks =\n");
190 printf(" +++ configured by: %s\n", configPWG3d2h.Data());
191 if (iPWG3d0mass) printf("= PWG3 D0 mass =\n");
192 if (iPWG3d0massLS) printf("= PWG3 D0 mass LS =\n");
193 if (iPWG3dplus) printf("= PWG3 D+ analysis =\n");
194 if (iPWG3LSd0) printf("= PWG3 LS D0 =\n");
195 if (iPWG3LSjpsi) printf("= PWG3 LS J/Psi =\n");
196 if (iPWG3CFd0) printf("= PWG3 CF D0 =\n");
197 if (iPWG3promptd0) printf("= PWG3 prompt D0 =\n");
199 if (iPWG4partcorr) printf("= PWG4 gamma-hadron, pi0 and gamma-jet correlations =\n");
200 if (iPWG4gammaconv) printf("= PWG4 gamma conversion =\n");
201 if (iPWG4omega3pi) printf("= PWG4 omega to 3 pions =\n");
202 printf("==================================================================\n");
203 printf(":: use MC truth %d\n", (UInt_t)useMC);
204 printf(":: use KINE filter %d\n", (UInt_t)useKFILTER);
205 printf(":: use track refs %d\n", (UInt_t)useTR);
206 printf(":: use tags %d\n", (UInt_t)useTAGS);
207 printf(":: use AOD tags %d\n", (UInt_t)useAODTAGS);
208 printf(":: use debugging %d\n", (UInt_t)useDBG);
209 printf(":: use PAR files %d\n", (UInt_t)usePAR);
210 printf(":: use AliEn plugin %d\n", (UInt_t)usePLUGIN);
212 //==========================================================================
213 // Connect to back-end system
214 if (!Connect(smode)) {
215 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
219 // Load common libraries and set include path
220 if (!LoadCommonLibraries(smode)) {
221 ::Error("AnalysisTrain", "Could not load common libraries");
225 // Make the analysis manager and connect event handlers
226 AliAnalysisManager *mgr = new AliAnalysisManager("Analysis Train", "Production train");
227 if (saveProofToAlien) mgr->SetSpecialOutputLocation(proof_outdir);
228 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
229 // Load analysis specific libraries
230 if (!LoadAnalysisLibraries(smode)) {
231 ::Error("AnalysisTrain", "Could not load analysis libraries");
235 // Create input handler (input container created automatically)
238 AliAODInputHandler *aodH = new AliAODInputHandler();
239 if (iPWG3d2h) aodH->AddFriend("AliAOD.VertexingHF.root");
240 mgr->SetInputEventHandler(aodH);
243 AliESDInputHandler *esdHandler = new AliESDInputHandler();
244 if (useTAGS) esdHandler->SetReadTags();
245 mgr->SetInputEventHandler(esdHandler);
247 // Monte Carlo handler
248 if (useMC && !iAODanalysis) {
249 AliMCEventHandler* mcHandler = new AliMCEventHandler();
250 mgr->SetMCtruthEventHandler(mcHandler);
251 mcHandler->SetReadTR(useTR);
253 // AOD output container, created automatically when setting an AOD handler
255 // AOD output handler
256 AliAODHandler* aodHandler = new AliAODHandler();
257 aodHandler->SetOutputFileName("AliAOD.root");
258 mgr->SetOutputEventHandler(aodHandler);
260 aodHandler->SetFillAOD(kFALSE);
261 aodHandler->SetCreateNonStandardAOD();
262 if (iJETAN) aodHandler->SetOutputFileName("AliAOD.Jets.root");
263 // if (iPWG3vertexing) aodHandler->SetOutputFileName("AliAOD.VertexingHF.root");
266 // Debugging if needed
267 if (useDBG) mgr->SetDebugLevel(3);
269 //==========================================================================
270 // Create the chain. In this example it is created only from ALIEN files but
271 // can be done to work in batch or grid mode as well.
272 TChain *chain = CreateChain(smode, plugin_mode);
274 //==========================================================================
275 // Load the tasks configuration macros for all wagons. These files are supposed now to be
276 // in the current workdir, but in AliEn they will be in the file catalog,
277 // mapped from AliRoot and pecified in the jdl input list.
279 // For now connection to top input container and common AOD output container
280 // is done in this macro, but in future these containers will be connected
281 // from each task configuration macro.
288 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
289 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
292 if (mgr->InitAnalysis()) {
294 if (saveTrain || strlen(config_file)) gSystem->ChangeDirectory(train_name);
295 StartAnalysis(smode, chain);
296 if (saveTrain && smode=="GRID") {
297 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
298 TString alien_workdir = gGrid->GetHomeDirectory();
299 if (iAODanalysis) alien_workdir += "analysisAOD";
300 else alien_workdir += "analysisESD";
301 alien_outdir = gridhandler->GetGridOutputDir();
302 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
303 alien_workdir.Data());
304 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), train_name.Data())))
305 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), train_name.Data()));
306 if (strcmp(plugin_mode, "test"))
307 TFile::Cp(Form("file:%sConfig.C",train_name.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), train_name.Data()));
312 //______________________________________________________________________________
313 void AddAnalysisTasks()
315 // Add all analysis task wagons to the train
316 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
317 if (iESDfilter && !iAODanalysis) {
318 // ESD filter task configuration.
319 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskESDFilter.C");
320 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilter(useKFILTER);
325 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
326 mgr->AddTask(tagTask);
327 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
328 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
329 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
330 mgr->ConnectOutput(tagTask, 1, coutTags);
333 // ********** PWG2 wagons ******************************************************
334 AliAnalysisManager::SetCommonFileName("PWG2histograms.root");
340 gROOT->LoadMacro("$ALICE_ROOT/PWG2/SPECTRA/macros/AddTaskProtons.C");
341 AliAnalysisTaskProtons *taskprotons = AddTaskProtons();
342 if (!taskprotons) ::Warning("AnalysisTrainNew", "AliAnalysisTaskProtons cannot run for this train conditions - EXCLUDED");
345 if (iPWG2checkcascade) {
346 gROOT->LoadMacro("$ALICE_ROOT/PWG2/SPECTRA/macros/AddTaskCheckCascade.C");
347 AliAnalysisTaskCheckCascade *taskcheckcascade = AddTaskCheckCascade();
348 if (!taskcheckcascade) ::Warning("AnalysisTrainNew", "AliAnalysisTaskCheckCascade cannot run for this train conditions - EXCLUDED");
352 gROOT->LoadMacro("$ALICE_ROOT/PWG2/SPECTRA/macros/AddTaskCheckV0.C");
353 AliAnalysisTaskCheckV0 *taskcheckV0 = AddTaskCheckV0();
354 if (!taskcheckV0) ::Warning("AnalysisTrainNew", "AliAnalysisTaskCheckV0 cannot run for this train conditions - EXCLUDED");
358 gROOT->LoadMacro("$ALICE_ROOT/PWG2/SPECTRA/macros/AddTaskStrange.C");
359 AliAnalysisTaskStrange *taskstrange = AddTaskStrange();
360 if (!taskstrange) ::Warning("AnalysisTrainNew", "AliAnalysisTaskStrange cannot run for this train conditions - EXCLUDED");
362 // performance cascades
363 if (iPWG2perfcascade) {
364 gROOT->LoadMacro("$ALICE_ROOT/PWG2/SPECTRA/macros/AddTaskCheckPerformanceCascade.C");
365 AliAnalysisTaskCheckPerformanceCascade *taskperfcascade = AddTaskCheckPerformanceCascade();
366 if (!taskperfcascade) ::Warning("AnalysisTrainNew", "AliAnalysisTaskCheckPerformanceCascade cannot run for this train conditions - EXCLUDED");
370 // Femtoscopy analysis modules
372 gROOT->LoadMacro("$ALICE_ROOT/PWG2/FEMTOSCOPY/macros/AddTaskFemto.C");
373 AliAnalysisTaskFemto *taskfemto = AddTaskFemto(configPWG2femto);
374 if (!taskfemto) ::Warning("AnalysisTrainNew", "AliAnalysisTaskFemto cannot run for this train conditions - EXCLUDED");
379 if (iPWG2kinkESDMC) {
380 gROOT->LoadMacro("$ALICE_ROOT/PWG2/KINK/macros/AddTaskKink.C");
381 AliAnalysisKinkESDMC *taskkink1 = AddTaskKink();
382 if (!taskkink1) ::Warning("AnalysisTrainNew", "AliAnalysisKinkESDMC cannot run for this train conditions - EXCLUDED");
384 if (iPWG2kinklikesign) {
385 gROOT->LoadMacro("$ALICE_ROOT/PWG2/KINK/macros/AddTaskKinkResonanceLikeSign.C");
386 AliResonanceKinkLikeSign *taskkink2 = AddTaskKinkResonanceLikeSign();
387 if (!taskkink2) ::Warning("AnalysisTrainNew", "AliResonanceKinkLikeSign cannot run for this train conditions - EXCLUDED");
389 if (iPWG2kinkKstarESD) {
390 gROOT->LoadMacro("$ALICE_ROOT/PWG2/KINK/macros/AddTaskKinkResonanceKstarESD.C");
391 AliAnalysisTaskKinkResonance *taskkink3 = AddTaskKinkResonanceKstarESD();
392 if (!taskkink3) ::Warning("AnalysisTrainNew", "AliAnalysisKinkResonanceKstarESD cannot run for this train conditions - EXCLUDED");
394 if (iPWG2kinkKstarMC) {
395 gROOT->LoadMacro("$ALICE_ROOT/PWG2/KINK/macros/AddTaskKinkResonanceKstarMC.C");
396 AliAnalysisTaskKinkResonance *taskkink4 = AddTaskKinkResonanceKstarMC();
397 if (!taskkink4) ::Warning("AnalysisTrainNew", "AliAnalysisKinkResonanceKstarMC cannot run for this train conditions - EXCLUDED");
399 if (iPWG2kinkL1520ESD) {
400 gROOT->LoadMacro("$ALICE_ROOT/PWG2/KINK/macros/AddTaskKinkResonanceL1520ESD.C");
401 AliAnalysisTaskKinkResonance *taskkink5 = AddTaskKinkResonanceL1520ESD();
402 if (!taskkink5) ::Warning("AnalysisTrainNew", "AliAnalysisKinkResonanceL1520ESD cannot run for this train conditions - EXCLUDED");
404 if (iPWG2kinkL1520MC) {
405 gROOT->LoadMacro("$ALICE_ROOT/PWG2/KINK/macros/AddTaskKinkResonanceL1520MC.C");
406 AliAnalysisTaskKinkResonance *taskkink6 = AddTaskKinkResonanceL1520MC();
407 if (!taskkink6) ::Warning("AnalysisTrainNew", "AliAnalysisKinkResonanceL1520MC cannot run for this train conditions - EXCLUDED");
409 if (iPWG2kinkPhiESD) {
410 gROOT->LoadMacro("$ALICE_ROOT/PWG2/KINK/macros/AddTaskKinkResonancePhiESD.C");
411 AliAnalysisTaskKinkResonance *taskkink7 = AddTaskKinkResonancePhiESD();
412 if (!taskkink7) ::Warning("AnalysisTrainNew", "AliAnalysisKinkResonancePhiESD cannot run for this train conditions - EXCLUDED");
414 if (iPWG2kinkPhiMC) {
415 gROOT->LoadMacro("$ALICE_ROOT/PWG2/KINK/macros/AddTaskKinkResonancePhiMC.C");
416 AliAnalysisTaskKinkResonance *taskkink8 = AddTaskKinkResonancePhiMC();
417 if (!taskkink8) ::Warning("AnalysisTrainNew", "AliAnalysisKinkResonancePhiMC cannot run for this train conditions - EXCLUDED");
421 // Event characterization
423 gROOT->LoadMacro("$ALICE_ROOT/PWG2/EVCHAR/macros/AddTaskSPDdNdEta.C");
424 AliAnalysisTaskSPDdNdEta *taskspddndeta = AddTaskSPDdNdEta();
425 if (!taskspddndeta) ::Warning("AnalysisTrainNew", "AliAnalysisTaskSPDdNdEta cannot run for this train conditions - EXCLUDED");
426 taskspddndeta->SetReadMC(useMC);
431 gROOT->LoadMacro("$ALICE_ROOT/PWG2/UNICOR/AddTaskUnicor.C");
432 AliAnalysisTaskUnicor *taskunicor = AddTaskUnicor();
433 if (!taskunicor) ::Warning("AnalysisTrainNew", "AliAnalysisTaskUnicor cannot run for this train conditions - EXCLUDED");
437 AliAnalysisManager::SetCommonFileName("forward.root");
439 gROOT->LoadMacro("$ALICE_ROOT/PWG2/FORWARD/analysis/AddTaskFMD.C");
440 AliFMDAnalysisTaskSE *taskfmd = AddTaskFMD();
441 if (!taskfmd) ::Warning("AnalysisTrainNew", "AliFMDAnalysisTaskSE cannot run for this train conditions - EXCLUDED");
443 AliAnalysisManager::SetCommonFileName("PWG2histograms.root");
447 gROOT->LoadMacro("$ALICE_ROOT/PWG2/FLOW/macros/AddTaskFlow.C");
449 Bool_t LYZ1SUM = kTRUE;
450 Bool_t LYZ1PROD = kTRUE;
451 Bool_t LYZ2SUM = kFALSE;
452 Bool_t LYZ2PROD = kFALSE;
453 Bool_t LYZEP = kFALSE;
457 Bool_t MCEP = kFALSE; //does not work yet 24/12/08
458 Bool_t kineFromESD = kTRUE;
459 Bool_t METHODS[] = {SP,LYZ1SUM,LYZ1PROD,LYZ2SUM,LYZ2PROD,LYZEP,GFC,QC,FQD,MCEP};
460 // Analysis type can be ESD, AOD, MC, ESDMC0, ESDMC1
461 TString type = "AOD";
462 if (!iAODanalysis) type = "ESD";
463 // Boolean to fill/not fill the QA histograms
465 // Boolean to use/not use weights for the Q vector
466 Bool_t WEIGHTS[] = {kFALSE,kFALSE,kFALSE}; //Phi, v'(pt), v'(eta)
467 AliAnalysisTaskFlowEvent* taskFE = AddTaskFlow(type,METHODS,QA,WEIGHTS);
468 if (!taskFE) ::Warning("AnalysisTrainNew", "AliAnalysisTaskFlowEvent cannot run for this train conditions - EXCLUDED");
473 gROOT->LoadMacro("$ALICE_ROOT/PWG2/RESONANCES/macros/train/AddAnalysisTaskRsn.C");
474 gROOT->LoadMacro("$ALICE_ROOT/PWG2/RESONANCES/macros/train/AddAnalysisTaskRsnEff.C");
475 TString path = gROOT->GetMacroPath();
476 path += ":$ALICE_ROOT/PWG2/RESONANCES/macros/train";
477 gROOT->SetMacroPath(path);
478 AddAnalysisTaskRsn(kTRUE);
479 AddAnalysisTaskRsnEff();
482 // ********** PWG3 wagons ******************************************************
483 AliAnalysisManager::SetCommonFileName("PWG3histograms.root");
486 if (iPWG3vertexing) {
487 gROOT->LoadMacro("$ALICE_ROOT/PWG3/vertexingHF/AddTaskVertexingHF.C");
488 if (!iPWG3d2h) TFile::Cp(gSystem->ExpandPathName(configPWG3d2h.Data()), Form("%s/ConfigVertexingHF.C", train_name.Data()));
489 AliAnalysisTaskSEVertexingHF *taskvertexingHF = AddTaskVertexingHF();
490 if (!taskvertexingHF) ::Warning("AnalysisTrainNew", "AliAnalysisTaskSEVertexingHF cannot run for this train conditions - EXCLUDED");
491 else mgr->RegisterExtraFile("AliAOD.VertexingHF.root");
496 gROOT->LoadMacro("$ALICE_ROOT/PWG3/hfe/AddTaskHFE.C");
497 AliAnalysisTaskHFE *taskHFE = AddTaskHFE();
498 if (!taskHFE) ::Warning("AnalysisTrainNew", "AliAnalysisTaskHFE cannot run for this train conditions - EXCLUDED");
503 gROOT->LoadMacro("$ALICE_ROOT/PWG3/vertexingHF/AddD2HTrain.C");
504 TFile::Cp(gSystem->ExpandPathName(configPWG3d2h.Data()), Form("%s/ConfigVertexingHF.C", train_name.Data()));
505 AddD2HTrain(iPWG3d0mass,iPWG3d0massLS,iPWG3dplus, iPWG3LSd0, iPWG3LSjpsi, iPWG3CFd0, iPWG3promptd0);
508 // ********** PWG4 wagons ******************************************************
509 AliAnalysisManager::SetCommonFileName("PWG4histograms.root");
513 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJets.C");
515 // Default jet reconstructor running on ESD's
516 AliAnalysisTaskJets * taskjets = AddTaskJets();
517 if (!taskjets) ::Warning("AnalysisTrainNew", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
519 // AOD-based analysis. Add all reconstructors to write into delta AOD's
520 // AddTaskJetsDelta();
521 AliAnalysisTaskJets * taskjets = AddTaskJets();
522 taskjets->SetNonStdBranch("jetsAOD_UA1_04");
525 // PWG4 hadron correlations
527 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPartCorr.C");
528 AliAnalysisTaskParticleCorrelation *taskpartcorrPHOS = AddTaskPartCorr("AOD", "PHOS");
529 if (!taskpartcorrPHOS) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation PHOS cannot run for this train conditions - EXCLUDED");
530 AliAnalysisTaskParticleCorrelation *taskpartcorrEMCAL = AddTaskPartCorr("AOD", "EMCAL");
531 if (!taskpartcorrEMCAL) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation EMCAL cannot run for this train conditions - EXCLUDED");
532 mgr->RegisterExtraFile("deltaAODPartCorr.root");
535 // PWG4 gamma conversion analysis
536 if (iPWG4gammaconv) {
537 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskGammaConversion.C");
538 TString cdir = gSystem->WorkingDirectory();
539 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
540 TString gcArguments = "-run-on-train -run-jet -run-chic -run-neutralmeson -run-cf";
541 AliAnalysisTaskGammaConversion * taskGammaConversion = AddTaskGammaConversion(gcArguments,mgr->GetCommonInputContainer());
542 gSystem->ChangeDirectory(cdir);
543 if (!taskGammaConversion) ::Warning("AnalysisTrainNew", "AliAnalysisTaskGammaConversion cannot run for these train conditions - EXCLUDED");
546 // PWG4 omega to 3 pions analysis
548 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskomega3pi.C");
549 AliAnalysisTaskOmegaPi0PiPi *taskomega3pi = AddTaskomega3pi();
550 if (!taskomega3pi) ::Warning("AnalysisTrainNew", "AliAnalysisTaskomega3pi cannot run for these train conditions - EXCLUDED");
554 //______________________________________________________________________________
555 void StartAnalysis(const char *mode, TChain *chain) {
558 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
559 if (!strcmp(mode, "LOCAL")) imode = 0;
560 if (!strcmp(mode, "PROOF")) imode = 1;
561 if (!strcmp(mode, "GRID")) imode = 2;
565 ::Error("AnalysisTrainNew.C::StartAnalysis", "Cannot create the chain");
568 mgr->StartAnalysis(mode, chain);
571 if (!proof_dataset.Length()) {
572 ::Error("AnalysisTrainNew.C::StartAnalysis", "proof_dataset is empty");
575 mgr->StartAnalysis(mode, proof_dataset, 1000);
579 if (!mgr->GetGridHandler()) {
580 ::Error("AnalysisTrainNew.C::StartAnalysis", "Grid plugin not initialized");
583 mgr->StartAnalysis("grid");
586 ::Error("AnalysisTrainNew.C::StartAnalysis", "Cannot create the chain");
589 mgr->StartAnalysis(mode, chain);
595 //______________________________________________________________________________
596 void CheckModuleFlags(const char *mode) {
597 // Checks selected modules and insure compatibility
599 if (!strcmp(mode, "LOCAL")) imode = 0;
600 if (!strcmp(mode, "PROOF")) imode = 1;
601 if (!strcmp(mode, "GRID")) imode = 2;
604 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
609 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
615 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
617 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
622 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
626 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
629 // Disable tasks that do not work yet on AOD data
631 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's without AOD handler");
634 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG2flow disabled on AOD's");
637 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG2femto disabled on AOD's");
640 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG2res disabled on AOD's");
643 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG2rsneff disabled on AOD's");
646 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG2kink disabled in analysis on AOD's");
649 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG2unicor disabled in analysis on AOD's");
652 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4evchar disabled on AOD's");
655 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG2forward disabled in analysis on AOD's");
658 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG3hfe disabled on AOD's");
661 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG3vertexing disabled on AOD's");
662 // iPWG3vertexing = 0;
664 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
667 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
672 if (!useMC) useTR = kFALSE;
674 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "iPWG2evchar disabled if not reading track references");
679 if (iPWG2perfcascade)
680 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG2perfcascade disabled without MC info");
681 iPWG2perfcascade = 0;
683 if (iJETAN && !iAODanalysis) iESDfilter=1;
684 if (iESDfilter) {iAODhandler=1; useCORRFW = kTRUE;}
685 if (iPWG2spectra || iPWG2flow || iPWG3vertexing || iPWG3hfe || iPWG2res || iPWG2rsneff) useCORRFW = kTRUE;
686 if (useKFILTER && !useMC) useKFILTER = kFALSE;
687 if (useAODTAGS && !iAODhandler) useAODTAGS = kFALSE;
690 //______________________________________________________________________________
691 Bool_t Connect(const char *mode) {
692 // Connect <username> to the back-end system.
694 if (!strcmp(mode, "LOCAL")) imode = 0;
695 if (!strcmp(mode, "PROOF")) imode = 1;
696 if (!strcmp(mode, "GRID")) imode = 2;
697 TString username = gSystem->Getenv("alien_API_USER");
702 if (!username.Length()) {
703 ::Error(Form("AnalysisTrainNew.C::Connect <%s>", mode), "Make sure you:\n \
704 1. Have called: alien-token-init <username>\n \
705 2. Have called: >source /tmp/gclient_env_$UID");
708 ::Info("AnalysisTrainNew.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
709 username.Data(), proof_cluster.Data());
710 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
711 // TProof::Open(Form("%s@%s:31093", username.Data(), proof_cluster.Data()));
712 TProof::Open(Form("%s@%s", username.Data(), proof_cluster.Data()));
714 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
715 ::Error(Form("AnalysisTrainNew.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
718 TGrid::Connect("alien://");
720 TString homedir = gGrid->GetHomeDirectory();
721 TString workdir = homedir + train_name;
722 if (!gGrid->Cd(workdir)) {
724 if (gGrid->Mkdir(workdir)) {
725 gGrid->Cd(train_name);
726 ::Info("AnalysisTrainNew::Connect()", "Directory %s created", gGrid->Pwd());
729 gGrid->Mkdir("proof_output");
730 gGrid->Cd("proof_output");
731 proof_outdir = Form("alien://%s", gGrid->Pwd());
735 if (!username.Length()) {
736 ::Error(Form("AnalysisTrainNew.C::Connect <%s>", mode), "Make sure you:\n \
737 1. Have called: alien-token-init <username>\n \
738 2. Have called: >source /tmp/gclient_env_$UID");
741 if (usePLUGIN && !gSystem->Getenv("alien_CLOSE_SE")) {
742 ::Error(Form("AnalysisTrainNew.C::Connect <%s>", mode),
743 "When using the AliEn plugin it is preferable to define the \
744 variable alien_CLOSE_SE in your environment.");
747 ::Info("AnalysisTrainNew.C::Connect", "Connecting user <%s> to AliEn ...",
749 TGrid::Connect("alien://");
750 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
753 ::Error("AnalysisTrainNew.C::Connect", "Unknown run mode: %s", mode);
756 ::Info("AnalysisTrainNew.C::Connect","Connected in %s mode", mode);
760 //______________________________________________________________________________
761 Bool_t LoadCommonLibraries(const char *mode)
763 // Load common analysis libraries.
765 if (!strcmp(mode, "LOCAL")) imode = 0;
766 if (!strcmp(mode, "PROOF")) imode = 1;
767 if (!strcmp(mode, "GRID")) imode = 2;
768 if (!gSystem->Getenv("ALICE_ROOT")) {
769 ::Error("AnalysisTrainNew.C::LoadCommonLibraries", "Analysis train requires that analysis libraries are compiled with a local AliRoot");
772 Bool_t success = kTRUE;
774 gSystem->Load("libTree.so");
775 gSystem->Load("libGeom.so");
776 gSystem->Load("libVMC.so");
777 gSystem->Load("libPhysics.so");
778 gSystem->Load("libMinuit.so");
780 // Load framework classes. Par option ignored here.
785 success &= LoadLibrary("STEERBase", mode, kTRUE);
786 success &= LoadLibrary("ESD", mode, kTRUE);
787 success &= LoadLibrary("AOD", mode, kTRUE);
788 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
789 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
790 if (useCORRFW) success &= LoadLibrary("CORRFW", mode, kTRUE);
792 success &= LoadLibrary("libSTEERBase.so", mode);
793 success &= LoadLibrary("libESD.so", mode);
794 success &= LoadLibrary("libAOD.so", mode);
795 success &= LoadLibrary("libANALYSIS.so", mode);
796 success &= LoadLibrary("libANALYSISalice.so", mode);
797 if (useCORRFW) success &= LoadLibrary("libCORRFW.so", mode);
798 gROOT->ProcessLine(".include $ALICE_ROOT/include");
803 if (useAFPAR && !gSystem->AccessPathName(AFversion)) ires = gProof->UploadPackage(AFversion);
805 success &= LoadLibrary("STEERBase", mode);
806 success &= LoadLibrary("ESD", mode);
807 success &= LoadLibrary("AOD", mode);
808 success &= LoadLibrary("ANALYSIS", mode);
809 success &= LoadLibrary("ANALYSISalice", mode);
810 if (useCORRFW) success &= LoadLibrary("CORRFW", mode);
812 ires = gProof->EnablePackage(AFversion);
813 if (ires<0) success = kFALSE;
814 if (useCORRFW) success &= LoadLibrary("CORRFW", mode);
818 ::Error("AnalysisTrainNew.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
822 ::Info("AnalysisTrainNew.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
823 ::Info("AnalysisTrainNew.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
824 gSystem->GetIncludePath());
826 ::Info("AnalysisTrainNew.C::LoadCommodLibraries", "Load common libraries: FAILED");
832 //______________________________________________________________________________
833 Bool_t LoadAnalysisLibraries(const char *mode)
835 // Load common analysis libraries.
836 Bool_t success = kTRUE;
838 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
839 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
843 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
845 // PWG4 particle correlations
847 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
848 !LoadLibrary("PHOSUtils", mode, kTRUE) ||
849 !LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
850 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
852 // PWG4 gamma conversion
853 if (iPWG4gammaconv) {
854 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
856 // PWG4 omega to 3 pions
858 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
862 if (!LoadLibrary("PWG2spectra", mode, kTRUE)) return kFALSE;
866 if (!LoadLibrary("PWG2flowCommon", mode, kTRUE) ||
867 !LoadLibrary("PWG2flowTasks", mode, kTRUE)) return kFALSE;
870 if (iPWG2res || iPWG2rsneff) {
871 if (!LoadLibrary("PWG2resonances", mode, kTRUE)) return kFALSE;
875 if (!LoadLibrary("PWG2kink", mode, kTRUE)) return kFALSE;
879 if (!LoadLibrary("PWG2unicor", mode, kTRUE)) return kFALSE;
883 if (!LoadLibrary("PWG2evchar", mode, kTRUE)) return kFALSE;
887 if (!LoadLibrary("PWG2AOD", mode, kTRUE) ||
888 !LoadLibrary("PWG2femtoscopy", mode, kTRUE) ||
889 !LoadLibrary("PWG2femtoscopyUser", mode, kTRUE)) return kFALSE;
890 // TFile::Cp(gSystem->ExpandPathName("$(ALICE_ROOT)/PWG2/FEMTOSCOPY/macros/ConfigFemtoAnalysis.C"), Form("%s/ConfigFemtoAnalysis.C", train_name.Data()));
891 // anaLibs += "ConfigFemtoAnalysis.C ";
895 if (!LoadLibrary("PWG2forward", mode, kTRUE)) return kFALSE;
898 if (iPWG3vertexing || iPWG3d2h) {
899 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
900 !LoadLibrary("PWG3vertexingHF", mode, kTRUE)) return kFALSE;
904 if (!LoadLibrary("PWG3hfe", mode, kTRUE)) return kFALSE;
907 ::Info("AnalysisTrainNew.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
911 //______________________________________________________________________________
912 Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
914 // Load a module library in a given mode. Reports success.
917 TString smodule(module);
918 if (!strcmp(mode, "LOCAL")) imode = 0;
919 if (!strcmp(mode, "PROOF")) imode = 1;
920 if (!strcmp(mode, "GRID")) imode = 2;
923 ::Error("AnalysisTrainNew.C::LoadLibrary", "Empty module name");
926 // If a library is specified, just load it
927 if (smodule.EndsWith(".so")) {
928 mod.Remove(mod.Index(".so"));
929 result = gSystem->Load(mod);
931 ::Error("AnalysisTrainNew.C::LoadLibrary", "Could not load library %s", module);
934 if (rec) anaLibs += Form("%s.so ",mod.Data());
937 // Check if the library is already loaded
938 if (strlen(gSystem->GetLibraries(Form("%s.so", module), "", kFALSE)) > 0)
944 result = SetupPar(module);
945 if (rec) anaPars += Form("%s.par ", module);
947 result = gSystem->Load(Form("lib%s.so", module));
948 if (rec) anaLibs += Form("lib%s.so ", module);
952 result = gProof->UploadPackage(module);
954 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
956 ::Error("AnalysisTrainNew.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
960 result = gProof->EnablePackage(module);
966 ::Error("AnalysisTrainNew.C::LoadLibrary", "Could not load module %s", module);
973 //______________________________________________________________________________
974 TChain *CreateChain(const char *mode, const char *plugin_mode)
976 // Create the input chain
978 if (!strcmp(mode, "LOCAL")) imode = 0;
979 if (!strcmp(mode, "PROOF")) imode = 1;
980 if (!strcmp(mode, "GRID")) imode = 2;
981 TChain *chain = NULL;
986 if (!local_xmldataset.Length()) {
988 chain = new TChain("aodTree");
989 if (gSystem->AccessPathName("data/AliAOD.root"))
990 ::Error("AnalysisTrainNew.C::CreateChain", "File: AliAOD.root not in ./data dir");
992 if (!saveTrain) chain->Add("data/AliAOD.root");
993 else chain->Add("../data/AliAOD.root");
997 chain = CreateChainSingle(local_xmldataset, "aodTree");
1000 if (!local_xmldataset.Length()) {
1002 chain = new TChain("esdTree");
1003 if (gSystem->AccessPathName("data/AliESDs.root"))
1004 ::Error("AnalysisTrainNew.C::CreateChain", "File: AliESDs.root not in ./data dir");
1006 if (!saveTrain) chain->Add("data/AliESDs.root");
1007 else chain->Add("../data/AliESDs.root");
1011 chain = CreateChainSingle(local_xmldataset, "esdTree");
1019 // AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1020 // AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1022 TString treeName = "esdTree";
1023 if (iAODanalysis) treeName = "aodTree";
1024 chain = CreateChainSingle("wn.xml", treeName);
1029 if (chain && chain->GetNtrees()) return chain;
1033 //______________________________________________________________________________
1034 TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
1036 printf("*******************************\n");
1037 printf("*** Getting the ESD Chain ***\n");
1038 printf("*******************************\n");
1039 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
1041 if (!myCollection) {
1042 ::Error("AnalysisTrainNew.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
1046 TChain* chain = new TChain(treeName);
1047 myCollection->Reset() ;
1048 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
1053 //______________________________________________________________________________
1054 Int_t SetupPar(char* pararchivename)
1056 if (!pararchivename || !strlen(pararchivename)) return -1;
1057 char processline[1024];
1058 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
1059 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
1060 ::Info("AnalysisTrainNew.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
1061 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
1062 Form("%s.par",pararchivename));
1064 ::Error("AnalysisTrainNew.C::SetupPar", "Cannot find %s.par", pararchivename);
1068 if (usePLUGIN && saveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, train_name.Data()));
1069 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
1071 TString ocwd = gSystem->WorkingDirectory();
1072 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
1074 // check for BUILD.sh and execute
1075 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
1076 printf("*******************************\n");
1077 printf("*** Building PAR archive ***\n");
1078 printf("*******************************\n");
1079 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
1080 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
1085 // check for SETUP.C and execute
1086 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
1087 printf("*******************************\n");
1088 printf("*** Setup PAR archive ***\n");
1089 printf("*******************************\n");
1090 gROOT->Macro("PROOF-INF/SETUP.C");
1092 if (!gSystem->ChangeDirectory(ocwd.Data())) return -1;
1096 //______________________________________________________________________________
1097 AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
1099 // Check if user has a valid token, otherwise make one. This has limitations.
1100 // One can always follow the standard procedure of calling alien-token-init then
1101 // source /tmp/gclient_env_$UID in the current shell.
1102 if (!AliAnalysisGrid::CreateToken()) return NULL;
1103 AliAnalysisAlien *plugin = new AliAnalysisAlien();
1104 // Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
1105 plugin->SetRunMode(plugin_mode);
1106 if (useProductionMode) plugin->SetProductionMode();
1107 plugin->SetJobTag(job_tag);
1108 plugin->SetNtestFiles(1);
1109 // plugin->SetPreferedSE("ALICE::NIHAM::File");
1110 // Set versions of used packages
1111 // plugin->SetAPIVersion("V2.4");
1112 plugin->SetAPIVersion("V1.0x");
1113 plugin->SetROOTVersion(root_version);
1114 plugin->SetAliROOTVersion(aliroot_version);
1115 // Declare input data to be processed.
1116 // Method 1: Create automatically XML collections using alien 'find' command.
1117 // Define production directory LFN
1118 plugin->SetGridDataDir(alien_datadir);
1119 // Set data search pattern
1120 if (iAODanalysis) plugin->SetDataPattern("*AliAOD.root");
1121 else plugin->SetDataPattern("*ESD.tag.root");
1122 // ...then add run numbers to be considered
1123 if (!iAODanalysis) plugin->SetRunRange(run_range[0], run_range[1]);
1124 // for (Int_t i=0; i<10; i++) {
1125 // if (run_numbers[i]==0) break;
1126 // plugin->AddRunNumber(run_numbers[i]);
1128 // Method 2: Declare existing data files (raw collections, xml collections, root file)
1129 // If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
1130 // XML collections added via this method can be combined with the first method if
1131 // the content is compatible (using or not tags)
1132 // plugin->AddDataFile("tag.xml");
1133 // plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
1134 // Define alien work directory where all files will be copied. Relative to alien $HOME.
1135 if (iAODanalysis) plugin->SetGridWorkingDir("analysisAOD");
1136 else plugin->SetGridWorkingDir("analysisESD");
1137 // Declare alien output directory. Relative to working directory.
1138 if (!alien_outdir.Length()) alien_outdir = Form("output_%s",train_name.Data());
1139 plugin->SetGridOutputDir(alien_outdir);
1141 TString ana_sources = "";
1142 TString ana_add = "";
1143 if (usePAR && anaPars.Length()) {
1144 printf("%s\n", anaPars.Data());
1147 arr = anaPars.Tokenize(" ");
1149 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
1153 // Declare the analysis source files names separated by blancs. To be compiled runtime
1154 // using ACLiC on the worker nodes.
1155 ana_sources = ana_sources.Strip();
1156 // Declare all libraries (other than the default ones for the framework. These will be
1157 // loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
1158 anaLibs = anaLibs.Strip();
1159 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
1160 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs);
1162 // Declare the output file names separated by blancs.
1163 // (can be like: file.root or file.root@ALICE::Niham::File)
1164 plugin->SetDefaultOutputs();
1165 plugin->SetMergeExcludes(mergeExclude);
1166 plugin->SetMaxMergeFiles(maxMergeFiles);
1167 plugin->SetNrunsPerMaster(nRunsPerMaster);
1168 // Optionally define the files to be archived.
1169 // plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
1172 // Put default output files to archive
1173 TString listhists = "";
1174 TString listaods = "";
1175 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1176 TIter next(mgr->GetOutputs());
1177 AliAnalysisDataContainer *output;
1178 while ((output=(AliAnalysisDataContainer*)next())) {
1179 const char *filename = output->GetFileName();
1180 if (!(strcmp(filename, "default"))) {
1181 if (!mgr->GetOutputEventHandler()) continue;
1182 filename = mgr->GetOutputEventHandler()->GetOutputFileName();
1183 if (listaods.Length()) listaods += ",";
1184 listaods += filename;
1186 listaods += "pyxsec_hists.root";
1188 if (!strcmp(filename, "pyxsec_hists.root")) continue;
1189 if (listhists.Contains(filename)) continue;
1190 if (listhists.Length()) listhists += ",";
1191 listhists += filename;
1194 if (mgr->GetExtraFiles().Length()) {
1195 if (listaods.Length()) listaods += ",";
1196 listaods += mgr->GetExtraFiles();
1197 listaods.ReplaceAll(" ", ",");
1199 if (listhists.Length()) listhists = Form("hist_archive.zip:%s@%s", listhists.Data(), outputStorages.Data());;
1200 if (listaods.Length()) listaods = Form("aod_archive.zip:%s@%s", listaods.Data(), outputStorages.Data());;
1201 if (!listhists.Length() && !listaods.Length()) {
1202 ::Fatal("AnalysisTrainNew", "No task output !");
1204 TString outputArchive = "log_archive.zip:stdout,stderr@ALICE::CERN::SE";
1205 if (listaods.Length()) {
1206 outputArchive += " ";
1207 outputArchive += listaods;
1209 if (listhists.Length()) {
1210 outputArchive += " ";
1211 outputArchive += listhists;
1214 // if (iAODanalysis && iPWG3d2h)
1215 // plugin->SetFriendChainName("AliAOD.VertexingHF.root");
1216 plugin->SetOutputArchive(outputArchive);
1217 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
1218 plugin->SetAnalysisMacro(Form("%s.C", train_name.Data()));
1219 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
1220 plugin->SetSplitMaxInputFileNumber(nFilesPerJob);
1221 // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
1222 // plugin->SetMaxInitFailed(5);
1223 // Optionally resubmit threshold.
1224 // plugin->SetMasterResubmitThreshold(90);
1225 // Optionally set time to live (default 30000 sec)
1226 plugin->SetTTL(70000);
1227 // Optionally set input format (default xml-single)
1228 plugin->SetInputFormat("xml-single");
1229 // Optionally modify the name of the generated JDL (default analysis.jdl)
1230 plugin->SetJDLName(Form("%s.jdl", train_name.Data()));
1231 // Optionally modify the executable name (default analysis.sh)
1232 plugin->SetExecutable(Form("%s.sh", train_name.Data()));
1233 // Optionally modify job price (default 1)
1234 plugin->SetPrice(1);
1235 // Optionally modify split mode (default 'se')
1236 plugin->SetSplitMode("se");
1240 //______________________________________________________________________________
1243 // Write train configuration in a file. The file name has the format:
1244 // train_[trainName]_ddMonthyyyy_time.C
1246 gSystem->Exec("date +%d%b%Y_%Hh%M > date.tmp");
1247 ifstream fdate("date.tmp");
1248 if (!fdate.is_open()) {
1249 ::Error("AnalysisTrainNew.C::Export","Could not generate file name");
1252 const char date[64];
1253 fdate.getline(date,64);
1255 gSystem->Exec("rm date.tmp");
1256 train_name = Form("train_%s_%s", train_name.Data(), date);
1258 train_name = Form("train_%s", train_name.Data());
1260 TString cdir = gSystem->WorkingDirectory();
1261 gSystem->MakeDirectory(train_name);
1262 gSystem->ChangeDirectory(train_name);
1264 out.open(Form("%sConfig.C",train_name.Data()), ios::out);
1266 ::Error("AnalysisTrainNew.C::Export", "Cannot open ConfigTrain.C for writing");
1270 out << " train_name = " << "\"" << train_name.Data() << "\";" << endl;
1271 out << " proof_cluster = " << "\"" << proof_cluster.Data() << "\";" << endl;
1272 out << " useAFPAR = " << useAFPAR << ";" << endl;
1274 out << " AFversion = " << AFversion.Data() << ";" << endl;
1275 out << " proof_dataset = " << "\"" << proof_dataset.Data() << "\";" << endl;
1276 out << " usePLUGIN = " << usePLUGIN << ";" << endl;
1277 out << " usePAR = " << usePAR << ";" << endl;
1278 out << " useCPAR = " << useCPAR << ";" << endl;
1279 out << " root_version = " << "\"" << root_version.Data() << "\";" << endl;
1280 out << " aliroot_version = " << "\"" << aliroot_version.Data() << "\";" << endl;
1281 out << " alien_datadir = " << "\"" << alien_datadir.Data() << "\";" << endl;
1282 if (!alien_outdir.Length()) alien_outdir = Form("output_%s",train_name.Data());
1283 out << " alien_outdir = " << "\"" << alien_outdir.Data() << "\";" << endl;
1284 out << " maxMergeFiles = " << maxMergeFiles << ";" << endl;
1285 out << " mergeExclude = " << "\"" << mergeExclude.Data() << "\";" << endl;
1286 out << " nRunsPerMaster = " << nRunsPerMaster << ";" << endl;
1287 out << " nFilesPerJob = " << nFilesPerJob << ";" << endl;
1288 // for (Int_t i=0; i<10; i++) {
1289 // if (run_numbers[i])
1290 // out << " run_numbers[" << i << "] = " << run_numbers[i] << ";" << endl;
1292 out << " run_range[0] = " << run_range[0] << ";" << endl;
1293 out << " run_range[1] = " << run_range[1] << ";" << endl;
1294 out << " useDBG = " << useDBG << ";" << endl;
1295 out << " useMC = " << useMC << ";" << endl;
1296 out << " useTAGS = " << useTAGS << ";" << endl;
1297 out << " useKFILTER = " << useKFILTER << ";" << endl;
1298 out << " useTR = " << useTR << ";" << endl;
1299 out << " useCORRFW = " << useCORRFW << ";" << endl;
1300 out << " useAODTAGS = " << useAODTAGS << ";" << endl;
1301 out << " saveTrain = " << "kFALSE;" << endl << endl;
1302 out << " // Analysis modules" << endl;
1303 out << " iAODanalysis = " << iAODanalysis << ";" << endl;
1304 out << " iAODhandler = " << iAODhandler << ";" << endl;
1305 out << " iESDfilter = " << iESDfilter << ";" << endl;
1306 out << " iMUONcopyAOD = " << iMUONcopyAOD << ";" << endl;
1307 out << " iJETAN = " << iJETAN << ";" << endl;
1308 out << " iPWG4partcorr = " << iPWG4partcorr << ";" << endl;
1309 out << " iPWG4gammaconv = " << iPWG4gammaconv << ";" << endl;
1310 out << " iPWG4omega3pi = " << iPWG4omega3pi << ";" << endl;
1311 out << " iPWG3vertexing = " << iPWG3vertexing << ";" << endl;
1312 out << " iPWG3hfe = " << iPWG3hfe << ";" << endl;
1313 out << " iPWG3d2h = " << iPWG3d2h << ";" << endl;
1314 out << " iPWG3d0mass = " << iPWG3d0mass << ";" << endl;
1315 out << " iPWG3d0massLS = " << iPWG3d0massLS << ";" << endl;
1316 out << " iPWG3dplus = " << iPWG3dplus << ";" << endl;
1317 out << " iPWG3LSd0 = " << iPWG3LSd0 << ";" << endl;
1318 out << " iPWG3LSjpsi = " << iPWG3LSjpsi << ";" << endl;
1319 out << " iPWG3CFd0 = " << iPWG3CFd0 << ";" << endl;
1320 out << " iPWG3promptd0 = " << iPWG3promptd0 << ";" << endl;
1321 out << " iPWG2femto = " << iPWG2femto << ";" << endl;
1322 out << " iPWG2spectra = " << iPWG2spectra << ";" << endl;
1323 out << " iPWG2protons = " << iPWG2protons << ";" << endl;
1324 out << " iPWG2checkcascade = " << iPWG2checkcascade << ";" << endl;
1325 out << " iPWG2perfcascade = " << iPWG2perfcascade << ";" << endl;
1326 out << " iPWG2checkv0 = " << iPWG2checkv0 << ";" << endl;
1327 out << " iPWG2strange = " << iPWG2strange << ";" << endl;
1328 out << " iPWG2flow = " << iPWG2flow << ";" << endl;
1329 out << " iPWG2res = " << iPWG2res << ";" << endl;
1330 out << " iPWG2rsneff = " << iPWG2rsneff << ";" << endl;
1331 out << " iPWG2kink = " << iPWG2kink << ";" << endl;
1332 out << " iPWG2kinkESDMC = " << iPWG2kinkESDMC << ";" << endl;
1333 out << " iPWG2kinklikesign = " << iPWG2kinklikesign << ";" << endl;
1334 out << " iPWG2kinkKstarESD = " << iPWG2kinkKstarESD << ";" << endl;
1335 out << " iPWG2kinkKstarMC = " << iPWG2kinkKstarMC << ";" << endl;
1336 out << " iPWG2kinkL1520ESD = " << iPWG2kinkL1520ESD << ";" << endl;
1337 out << " iPWG2kinkL1520MC = " << iPWG2kinkL1520MC << ";" << endl;
1338 out << " iPWG2kinkPhiESD = " << iPWG2kinkPhiESD << ";" << endl;
1339 out << " iPWG2kinkPhiMC = " << iPWG2kinkPhiMC << ";" << endl;
1340 out << " iPWG2unicor = " << iPWG2unicor << ";" << endl;
1341 out << " iPWG2evchar = " << iPWG2evchar << ";" << endl;
1342 out << " iPWG2forward = " << iPWG2forward << ";" << endl << endl;
1343 out << "// Configuration fot the wagons" << endl;
1344 out << " configPWG2femto = \"" << configPWG2femto << "\";" << endl;
1345 out << " configPWG3d2h = \"" << configPWG3d2h << "\";" << endl;
1347 ::Info("AnalysisTrainNew.C::WriteConfig", "Train configuration wrote to file %s", Form("config_%s.C", train_name.Data()));
1348 gSystem->ChangeDirectory(cdir);
1351 //______________________________________________________________________________
1352 Bool_t LoadConfig(const char *filename)
1354 // Read train configuration from file
1355 if (gSystem->AccessPathName(filename)) {
1356 ::Error("AnalysisTrainNew.C::LoadConfig", "Config file name not found");
1359 gROOT->ProcessLine(Form(".x %s", filename));
1360 ::Info("AnalysisTrainNew.C::LoadConfig", "Train configuration loaded from file %s", filename);