2 /**************************************************************************
3 * This file is property of and copyright by *
4 * the Relativistic Heavy Ion Group (RHIG), Yale University, US, 2009 *
6 * Primary Author: Per Thomas Hille <perthomas.hille@yale.edu> *
8 * Contributors are mentioned in the code where appropriate. *
9 * Please report bugs to perthomas.hille@yale.edu *
11 * Permission to use, copy, modify and distribute this software and its *
12 * documentation strictly for non-commercial purposes is hereby granted *
13 * without fee, provided that the above copyright notice appears in all *
14 * copies and that both the copyright notice and this permission notice *
15 * appear in the supporting documentation. The authors make no claims *
16 * about the suitability of this software for any purpose. It is *
17 * provided "as is" without express or implied warranty. *
18 **************************************************************************/
20 // The Peak-Finder algorithm
21 // The amplitude is extracted as a
22 // weighted sum of the samples using the
23 // best possible weights.
24 // The wights is calculated only once and the
25 // Actual extraction of amplitude and peak position
26 // Is done with a simple vector multiplication, allowing for
27 // Extreemely fast computations.
29 #include "AliCaloRawAnalyzerPeakFinder.h"
30 #include "AliCaloBunchInfo.h"
31 #include "AliCaloFitResults.h"
34 #include "AliCDBEntry.h"
35 #include "AliCDBManager.h"
37 #include "AliCaloPeakFinderVectors.h"
43 ClassImp( AliCaloRawAnalyzerPeakFinder )
46 AliCaloRawAnalyzerPeakFinder::AliCaloRawAnalyzerPeakFinder() :AliCaloRawAnalyzer("Peak-Finder", "PF"),
47 fPeakFinderVectors(0),
52 fAlgo= Algo::kPeakFinder;
53 InitOCDB(fRunOnAlien);
54 fPeakFinderVectors = new AliCaloPeakFinderVectors() ;
61 AliCaloRawAnalyzerPeakFinder::InitOCDB(bool alien) const
63 // Setting the default OCDB pathe depending on wether we work locally or on the GRID.
64 if( !AliCDBManager::Instance()->IsDefaultStorageSet ())
66 AliCDBManager::Instance()->SetDefaultStorage( alien == true ? "alien://$ALICE_ROOT/OCDB" : "local://$ALICE_ROOT/OCDB" );
67 AliCDBManager::Instance()->SetRun(100);
73 AliCaloRawAnalyzerPeakFinder::ResetVectors()
76 for(int i=0; i < PF::MAXSTART; i++)
78 for(int j=0; j < PF::SAMPLERANGE; j++ )
80 for(int k=0; k < 100; k++ )
82 fPFAmpVectors[i][j][k] = 0;
83 fPFTofVectors[i][j][k] = 0;
84 fPFAmpVectorsCoarse[i][j][k] = 0;
85 fPFTofVectorsCoarse[i][j][k] = 0;
92 AliCaloRawAnalyzerPeakFinder::~AliCaloRawAnalyzerPeakFinder()
99 AliCaloRawAnalyzerPeakFinder::ScanCoarse(const Double_t *const array, const int length ) const
101 // Fisrt (coarce) estimate of Amplitude using the Peak-Finder.
102 // The output of the first iteration is sued to select vectors
103 // for the second iteration.
108 for(int i=0; i < length; i++)
110 tmpTof += fPFTofVectorsCoarse[0][length][i]*array[i];
111 tmpAmp += fPFAmpVectorsCoarse[0][length][i]*array[i];
114 tmpTof = tmpTof / tmpAmp ;
120 AliCaloRawAnalyzerPeakFinder::Evaluate( const vector<AliCaloBunchInfo> &bunchvector, const UInt_t altrocfg1, const UInt_t altrocfg2 )
122 // Evaluation of amplitude and TOF
123 if( fIsInitialized == false )
125 cout << __FILE__ << ":" << __LINE__ << "ERROR, peakfinder vectors not loaded" << endl;
126 return AliCaloFitResults(kInvalid, kInvalid);
129 // Extracting the amplitude using the Peak-Finder algorithm
130 // The amplitude is a weighted sum of the samples using
133 short maxampindex; //index of maximum amplitude
134 short maxamp; //Maximum amplitude
136 int index = SelectBunch( bunchvector, &maxampindex, &maxamp );
140 Float_t ped = ReverseAndSubtractPed( &(bunchvector.at(index)) , altrocfg1, altrocfg2, fReversed );
141 Float_t maxf = TMath::MaxElement( bunchvector.at(index).GetLength(), fReversed );
142 short timebinOffset = maxampindex - (bunchvector.at( index ).GetLength()-1);
144 if( maxf < fAmpCut || ( maxamp - ped) > fOverflowCut ) // (maxamp - ped) > fOverflowCut = Close to saturation (use low gain then)
146 return AliCaloFitResults( maxamp, ped, Ret::kCrude, maxf, timebinOffset);
148 else if ( maxf >= fAmpCut )
152 short maxrev = maxampindex - bunchvector.at(index).GetStartBin();
153 SelectSubarray( fReversed, bunchvector.at(index).GetLength(), maxrev, &first, &last, fFitArrayCut);
154 int nsamples = last - first;
156 if( ( nsamples ) >= fNsampleCut ) // no if statement needed really; keep for readability
158 int startbin = bunchvector.at(index).GetStartBin();
159 int n = last - first;
160 int pfindex = n - fNsampleCut;
161 pfindex = pfindex > PF::SAMPLERANGE ? PF::SAMPLERANGE : pfindex;
163 int dt = maxampindex - startbin -2;
167 Float_t tmptof = ScanCoarse( &fReversed[dt] , n );
174 if( tmptof > -1 && tmptof < 100 )
185 for(int k=0; k < PF::SAMPLERANGE; k++ )
187 tof += fPFTofVectors[0][pfindex][k]*fReversed[ dt +k + tmpindex -1 ];
190 for( int i=0; i < PF::SAMPLERANGE; i++ )
193 fAmp += fPFAmpVectors[0][pfindex][i]*fReversed[ dt +i +tmpindex -1 ];
196 if( TMath::Abs( (maxf - fAmp )/maxf ) > 0.1 )
201 tof = timebinOffset - 0.01*tof/fAmp - fL1Phase/TIMEBINWITH; // clock
203 // use local-array time for chi2 estimate
204 Float_t chi2 = CalculateChi2(fAmp, tof-timebinOffset+maxrev, first, last);
205 Int_t ndf = last - first - 1; // nsamples - 2
206 return AliCaloFitResults( maxamp, ped , Ret::kFitPar, fAmp, tof,
207 timebinOffset, chi2, ndf,
208 Ret::kDummy, AliCaloFitSubarray(index, maxrev, first, last) );
212 Float_t chi2 = CalculateChi2(maxf, maxrev, first, last);
213 Int_t ndf = last - first - 1; // nsamples - 2
214 return AliCaloFitResults( maxamp, ped , Ret::kCrude, maxf, timebinOffset,
215 timebinOffset, chi2, ndf, Ret::kDummy, AliCaloFitSubarray(index, maxrev, first, last) );
219 return AliCaloFitResults(kInvalid, kInvalid);
224 AliCaloRawAnalyzerPeakFinder::CopyVectors( const AliCaloPeakFinderVectors *const pfv )
229 for(int i = 0; i < PF::MAXSTART ; i++)
231 for( int j=0; j < PF::SAMPLERANGE; j++)
233 pfv->GetVector( i, j, fPFAmpVectors[i][j] , fPFTofVectors[i][j],
234 fPFAmpVectorsCoarse[i][j] , fPFTofVectorsCoarse[i][j] );
236 fPeakFinderVectors->SetVector( i, j, fPFAmpVectors[i][j], fPFTofVectors[i][j],
237 fPFAmpVectorsCoarse[i][j], fPFTofVectorsCoarse[i][j] );
243 AliFatal( "pfv = ZERO !!!!!!!");
249 AliCaloRawAnalyzerPeakFinder::LoadVectorsOCDB()
251 //Loading of Peak-Finder vectors from the
252 //Offline Condition Database (OCDB)
253 AliCDBEntry* entry = AliCDBManager::Instance()->Get("EMCAL/Calib/PeakFinder/");
257 cout << __FILE__ << ":" << __LINE__ << ": Printing metadata !! " << endl;
258 entry->PrintMetaData();
259 AliCaloPeakFinderVectors *pfv = (AliCaloPeakFinderVectors *)entry->GetObject();
262 cout << __FILE__ << ":" << __LINE__ << "_ ERRROR " << endl;
268 fIsInitialized = true;
275 AliCaloRawAnalyzerPeakFinder::LoadVectorsASCII()
277 //Read in the Peak finder vecors from ASCI files
278 fIsInitialized= true;
279 const Int_t buffersize = 256;
280 for(int i = 0; i < PF::MAXSTART ; i++)
282 for( int j=0; j < PF::SAMPLERANGE; j++)
284 char filenameCoarse[buffersize];
285 char filename[buffersize];
286 int n = j+fNsampleCut;
287 double start = (double)i+0;
289 snprintf(filename, buffersize, "%s/EMCAL/vectors-emcal/start%.1fN%dtau0.235fs10dt1.0.txt", getenv("ALICE_ROOT"), start, n);
290 snprintf(filenameCoarse, buffersize, "%s/EMCAL/vectors-emcal/start%.1fN%dtau0.235fs10dt3.0.txt", getenv("ALICE_ROOT"), start, n);
292 FILE *fp = fopen(filename, "r");
293 FILE *fpc = fopen(filenameCoarse, "r");
297 AliFatal( Form( "could not open file: %s", filename ) );
301 AliFatal( Form( "could not open file: %s", filenameCoarse ) );
305 for(int m = 0; m < n ; m++ )
307 fscanf(fp, "%lf\t", &fPFAmpVectors[i][j][m] );
308 fscanf(fpc, "%lf\t", &fPFAmpVectorsCoarse[i][j][m] );
312 for(int m = 0; m < n ; m++ )
314 fscanf(fp, "%lf\t", &fPFTofVectors[i][j][m] );
315 fscanf(fpc, "%lf\t", &fPFTofVectorsCoarse[i][j][m] );
318 fPeakFinderVectors->SetVector( i, j, fPFAmpVectors[i][j], fPFTofVectors[i][j],
319 fPFAmpVectorsCoarse[i][j], fPFTofVectorsCoarse[i][j] );
332 AliCaloRawAnalyzerPeakFinder::WriteRootFile() const
334 // Utility function to write Peak-Finder vectors to an root file
335 // The output is used to create an OCDB entry.
336 fPeakFinderVectors->PrintVectors();
337 TFile *f = new TFile("peakfindervectors2.root", "recreate" );
338 fPeakFinderVectors->Write();
345 AliCaloRawAnalyzerPeakFinder::PrintVectors()
347 for(int i=0; i < 20; i++)
349 for( int j = 0; j < PF::MAXSTART; j ++ )
351 for( int k=0; k < PF::SAMPLERANGE; k++ )
353 cout << fPFAmpVectors[j][k][i] << "\t" ;
358 cout << __FILE__ << ":" << __LINE__ << ":.... DONE !!" << endl;