Modified initial comments, since this DA should not be used for run type
[u/mrichter/AliRoot.git] / ITS / ITSSPDSCANda.cxx
1 /*
2 Contact: henrik.tydesjo@cern.ch
3 Link: tydes.home.cern.ch/tydes/doc/CalibrationOverview/CalibrationAlgorithms/
4 Run Type: DAQ_MIN_TH_SCAN,DAQ_MEAN_TH_SCAN,DAQ_UNIFORMITY_SCAN,DAQ_NOISY_PIX_SCAN,DAQ_PIX_DELAY_SCAN
5 DA Type: LDC
6 Number of events needed: Depending on scan type
7 Input Files: spd_standal_params,spd_perm_noisy ,  ./calibResults/ScanNoisy/* ,  raw data
8 Output Files: ./calibResults/ScanReference/* ,  ./calibResults/ScanDCSconfigToFXS/* ,  ./calibResults/ScanNoisyToFXS/* ,  ./calibResults/ScanNoisy/*
9 Trigger types used: PHYSICS
10 */
11
12 ////////////////////////////////////////////////////////////////////////////////
13 // This program can be compiled in two modes.                                 //
14 //                                                                            //
15 // 1. With the DAQ DA framework on. This is the default operating mode.       //
16 // Call this program with the name of the executable followed by the          //
17 // data files to process.                                                     //
18 //                                                                            //
19 // 2. Without the DAQ DA framework on. Define the SPD_DA_OFF environment var. //
20 // Call this program with the name of the executable followed by the          //
21 // runNr and the data files to process.                                       //
22 //                                                                            //
23 ////////////////////////////////////////////////////////////////////////////////
24
25 #ifndef SPD_DA_OFF
26 extern "C" {
27 #include "daqDA.h"
28 }
29 #endif
30 #include "event.h"
31 #include "monitor.h"
32 #include "AliRawReaderDate.h"
33 #include "AliITSRawStreamSPD.h"
34 #include "AliITSOnlineSPDscan.h"
35 #include "AliITSOnlineSPDscanSingle.h"
36 #include "AliITSOnlineSPDscanMultiple.h"
37 #include "AliITSOnlineSPDscanMeanTh.h"
38 #include "AliITSOnlineSPDscanAnalyzer.h"
39 #include "AliITSOnlineCalibrationSPDhandler.h"
40 #include "AliLog.h"
41 #include <iostream>
42 #include <fstream>
43 #include <TROOT.h>
44 #include <TPluginManager.h>
45 #include <TObjArray.h>
46 #include <TObjString.h>
47 #include <TString.h>
48 #include <TFitter.h>
49
50 int main(int argc, char **argv) {
51   if (argc<2) {
52     printf("Wrong number of arguments\n");
53     return -1;
54   }
55
56   // directory structure, hard coded
57   char *saveDirNoisy         = "./calibResults/ScanNoisy";          // may NOT delete content
58   char *saveDirNoisyToFXS    = "./calibResults/ScanNoisyToFXS";     //     may delete content
59   char *saveDirDCSconfigToFXS= "./calibResults/ScanDCSconfigToFXS"; //     may delete content
60   char *saveDirRef           = "./calibResults/ScanReference";      //     may delete content
61   char *saveDirIdsToFXS      = "./calibResults/IdsToFXS";           //     may delete content
62   char *configFilesDir       = "./configFiles";                     //     may delete content
63
64   // make sure the directory structure is correct:
65   system("mkdir ./calibResults >& /dev/null");
66   system("mkdir ./calibResults/ScanNoisy >& /dev/null");
67   system("mkdir ./calibResults/ScanNoisyToFXS >& /dev/null");
68   system("mkdir ./calibResults/ScanDCSconfigToFXS >& /dev/null");
69   system("mkdir ./calibResults/ScanReference >& /dev/null");
70   system("mkdir ./calibResults/IdsToFXS >& /dev/null");
71   system("mkdir ./configFiles >& /dev/null");
72   // prameters config files
73   TString paramsFileName = Form("%s/standal_params.txt",configFilesDir);
74   TString permNoisyFileName = Form("%s/perm_noisy.txt",configFilesDir);
75
76   TFitter *fitter = new TFitter(3);
77   TVirtualFitter::SetFitter(fitter);
78
79   // This line is needed in case of a stand-alone application w/o
80   // $ROOTSYS/etc/system.rootrc file
81   gROOT->GetPluginManager()->AddHandler("TVirtualStreamerInfo",
82                                         "*",
83                                         "TStreamerInfo",
84                                         "RIO",
85                                         "TStreamerInfo()");
86
87   // turn off annoying warning messages
88   new AliLog;
89   AliLog::Instance()->SetGlobalDebugLevel(-20);
90
91   // calib scan types
92   enum calib_types{MINTH,MEANTH,DAC,UNIMA,NOISE,DELAY};
93
94
95   // ********* STEP 0: Get configuration files from db (if there are any) , then read parameters*********
96   UInt_t nrTuningParams = 0;
97   TObjArray paramNames;  paramNames.SetOwner(kTRUE);
98   TObjArray paramVals;  paramVals.SetOwner(kTRUE);
99   
100   // tuning parameters:
101   Int_t status = 0;
102 #ifndef SPD_DA_OFF
103   TString idp = "spd_standal_params";
104   status=daqDA_DB_getFile(idp.Data(),paramsFileName.Data());
105   if (status) {
106     printf("Failed to get config file %s: status=%d. Using default tuning parameters.\n",idp.Data(),status);
107     TString rmCmd = Form("rm -f %s",paramsFileName.Data());
108     system(rmCmd.Data());
109   }
110 #endif
111   if (status==0) {
112     ifstream paramsFile;
113     paramsFile.open(paramsFileName.Data(), ifstream::in);
114     if (paramsFile.fail()) {
115       printf("No config file (%s) present. Using default tuning parameters.\n",paramsFileName.Data());
116     }
117     else {
118       while(1) {
119         Char_t paramN[50];
120         Char_t paramV[50];
121         paramsFile >> paramN;
122         if (paramsFile.eof()) break;
123         paramsFile >> paramV;
124         paramNames.AddAtAndExpand(new TObjString(paramN),nrTuningParams);
125         paramVals.AddAtAndExpand(new TObjString(paramV),nrTuningParams);
126         nrTuningParams++;
127         if (paramsFile.eof()) break;
128       }
129       paramsFile.close();
130     }
131   }
132   //  for (UInt_t i=0; i<nrTuningParams; i++) {
133   //  //    printf("Entry %d: N=%s , V=%s\n",i,((TString*)paramNames.At(i))->Data(),((TString*)paramVals.At(i))->Data());
134   //    printf("Entry %d: N=%s , V=%s\n",i,((TObjString*)paramNames.At(i))->GetString().Data(),((TObjString*)paramVals.At(i))->GetString().Data());
135   //  }
136
137   // perm noisy list:
138   Int_t permstatus = 0;
139 #ifndef SPD_DA_OFF
140   TString idn = "spd_perm_noisy";
141   permstatus=daqDA_DB_getFile(idn.Data(),permNoisyFileName.Data());
142   if (permstatus) {
143     printf("Failed to get config file %s: status=%d. No permanently noisy pixels will be added.\n",idn.Data(),permstatus);
144     TString rmCmd = Form("rm -f %s",permNoisyFileName.Data());
145     system(rmCmd.Data());
146   }
147 #endif
148
149
150
151
152   // ********* STEP 1: Produce scan container files (Reference Data). ***********************************
153   int startSeg = 1;
154
155 #ifndef SPD_DA_OFF
156   if (getenv("DATE_RUN_NUMBER")==0) {
157     printf("DATE_RUN_NUMBER not properly set.\n");
158     return -1;
159   }
160   int runNr = atoi(getenv("DATE_RUN_NUMBER"));
161 #else
162   int runNr = atoi(argv[1]);
163   startSeg = 2;
164 #endif
165
166   // container objects
167   AliITSOnlineSPDscan *scanObj[20];
168   Bool_t bScanInit[20];
169   for (UInt_t eqId=0; eqId<20; eqId++) {
170     scanObj[eqId]=NULL;
171     bScanInit[eqId]=kFALSE;
172   }
173   // header data variables
174   UInt_t routerNr[20];
175   Bool_t halfStaveScanned[20][6];
176   UInt_t type[20];
177   Bool_t dataFormat[20];
178   UInt_t triggers[20];
179   Bool_t chipPresent[20][6][10];
180   UInt_t dacStart[20];  
181   UInt_t dacEnd[20];
182   UInt_t dacStep[20];
183   UInt_t dacId[20];
184   UInt_t rowStart[20];  
185   UInt_t rowEnd[20];
186   UInt_t rowValue[20];
187   UInt_t dacValue[20];
188   UInt_t dacHigh[20][6];
189   UInt_t dacLow[20][6];
190   UInt_t TPAmp[20][6];
191   Bool_t minTHchipPresent[20][10];
192   // current scan step flag
193   Int_t currentStep[20];
194   for (UInt_t eqId=0; eqId<20; eqId++) currentStep[eqId] = 9999;
195
196   // loop over run segments
197   for (int segNr=startSeg; segNr<argc; segNr++) {
198
199     int status;
200
201     /* define data source : this is argument 1 */  
202     status=monitorSetDataSource( argv[segNr] );
203     if (status!=0) {
204       printf("monitorSetDataSource() failed : %s\n",monitorDecodeError(status));
205       return -1;
206     }
207     /* declare monitoring program */
208     status=monitorDeclareMp("ITS_SPD_CAL");
209     if (status!=0) {
210       printf("monitorDeclareMp() failed : %s\n",monitorDecodeError(status));
211       return -1;
212     }
213     /* define wait event timeout - 1s max */
214     monitorSetNowait();
215     monitorSetNoWaitNetworkTimeout(1000);
216     
217     
218     UInt_t eventNr=0;
219
220     /* main loop (infinite) */
221     for(;;) {
222       
223       struct eventHeaderStruct *event;
224       eventTypeType eventT;
225       
226       /* check shutdown condition */
227 #ifndef SPD_DA_OFF
228       if (daqDA_checkShutdown()) {break;}
229 #endif
230       /* get next event (blocking call until timeout) */
231       status=monitorGetEventDynamic((void **)&event);
232       if (status==MON_ERR_EOF) {
233         printf ("End of File detected\n");
234         break; /* end of monitoring file has been reached */
235       }
236       if (status!=0) {
237         printf("monitorGetEventDynamic() failed : %s\n",monitorDecodeError(status));
238         break;
239       }
240       /* retry if got no event */
241       if (event==NULL) {
242         continue;
243       }
244
245       eventT=event->eventType;
246       if (eventT == PHYSICS_EVENT) {
247         
248         eventNr++;
249         //      printf("eventNr %d\n",eventNr);
250         
251         AliRawReader *reader = new AliRawReaderDate((void*)event);
252         AliITSRawStreamSPD *str = new AliITSRawStreamSPD(reader);
253         
254         for (UInt_t eqId=0; eqId<20; eqId++) {
255           
256           reader->Reset();
257           reader->Select("ITSSPD",eqId,eqId);
258           
259           // Hit Event flags, specific for one event
260           Bool_t hitEventHSIncremented[6];
261           Bool_t hitEventChipIncremented[6][10];
262           for (UInt_t hs=0; hs<6; hs++) {
263             hitEventHSIncremented[hs] = kFALSE;
264             for (UInt_t chip=0; chip<10; chip++) {
265               hitEventChipIncremented[hs][chip] = kFALSE;
266             }
267           }
268           
269           if (str->ReadCalibHeader()>0) {
270             // first check the type:
271             if (bScanInit[eqId] && type[eqId]!=str->GetHtype()) {
272               printf("Calib header problem. Type changed (%d -> %d)!\n",type[eqId],str->GetHtype());
273             }
274
275             // read calib values
276             routerNr[eqId]    = str->GetHrouterNr();
277             type[eqId]        = str->GetHtype();
278             dataFormat[eqId]  = str->GetHdataFormat();
279             triggers[eqId]    = str->GetHtriggers();
280             dacStart[eqId]    = str->GetHdacStart();
281             dacEnd[eqId]      = str->GetHdacEnd();
282             dacStep[eqId]     = str->GetHdacStep();
283             dacId[eqId]       = str->GetHdacId();
284             rowStart[eqId]    = str->GetHrowStart();
285             rowEnd[eqId]      = str->GetHrowEnd();
286             rowValue[eqId]    = str->GetHrowValue();
287             dacValue[eqId]    = str->GetHdacValue(); // this will change below for MEANTH scan
288
289             for (UInt_t hs=0; hs<6; hs++) {
290               halfStaveScanned[eqId][hs] = str->GetHhalfStaveScanned(hs);
291               dacHigh[eqId][hs]          = str->GetHdacHigh(hs);
292               dacLow[eqId][hs]           = str->GetHdacLow(hs);
293               TPAmp[eqId][hs]            = str->GetHTPAmp(hs);
294               for (UInt_t chip=0; chip<10; chip++) {
295                 chipPresent[eqId][hs][chip] = str->GetHchipPresent(hs,chip);
296                 if (type[eqId]==MEANTH && chipPresent[eqId][hs][chip]) dacValue[eqId] = str->GetHdacLow(hs);
297               }
298             }
299             for (UInt_t chip=0; chip<10; chip++) {
300               minTHchipPresent[eqId][chip] = str->GetHminTHchipPresent(chip);
301             }
302
303             currentStep[eqId] = (dacValue[eqId]-dacStart[eqId])/dacStep[eqId];
304             if (type[eqId]==DELAY) {
305               currentStep[eqId]=currentStep[eqId]*2;
306               dacValue[eqId]=dacValue[eqId]*2;
307               if (dacHigh[eqId][0]==128) { // misc_ctrl value
308                 currentStep[eqId]=currentStep[eqId]+1;
309                 dacValue[eqId]=dacValue[eqId]+1;
310               }
311             }
312
313             // router nr check:
314             if (routerNr[eqId]!=eqId) {
315               printf("Router nr problem? Router nr %d != EqID %d\n",routerNr[eqId],eqId);
316             }
317
318             if (!bScanInit[eqId]) {
319               // initialize container object
320               TString fileName = Form("%s/SPDcal_run_%d_eq_%d.root",saveDirRef,runNr,eqId);
321               switch (type[eqId]) {
322               case NOISE:
323               case UNIMA:
324                 scanObj[eqId] = new AliITSOnlineSPDscanSingle(fileName.Data());
325                 ((AliITSOnlineSPDscanSingle*)scanObj[eqId])->ClearThis();
326                 bScanInit[eqId]=kTRUE;
327                 break;
328               case MINTH:
329               case DAC:
330               case DELAY:
331                 scanObj[eqId] = new AliITSOnlineSPDscanMultiple(fileName.Data());
332                 scanObj[eqId]->ClearThis();
333                 bScanInit[eqId]=kTRUE;
334                 break;
335               case MEANTH: 
336                 scanObj[eqId] = new AliITSOnlineSPDscanMeanTh(fileName.Data());
337                 scanObj[eqId]->ClearThis();
338                 bScanInit[eqId]=kTRUE;
339                 break;
340               default:
341                 printf("Unknown scan type: %d.\n",type[eqId]);
342               }
343               // some multiple scan data
344               if (type[eqId]==MINTH || type[eqId]==MEANTH || type[eqId]==DAC || type[eqId]==DELAY) {
345                 ((AliITSOnlineSPDscanMultiple*)scanObj[eqId])->SetDacId(dacId[eqId]);
346               }
347               // some common data
348               scanObj[eqId]->SetRunNr((UInt_t)runNr);
349               scanObj[eqId]->SetRouterNr(routerNr[eqId]);
350               for (UInt_t hs=0; hs<6; hs++) {
351                 scanObj[eqId]->SetHalfStaveScanned(hs,halfStaveScanned[eqId][hs]);
352               }
353               scanObj[eqId]->SetType(type[eqId]);
354               scanObj[eqId]->SetDataFormat(dataFormat[eqId]);
355               for (Int_t hs=0; hs<6; hs++) {          
356                 for (UInt_t chip=0; chip<10; chip++) {
357                   scanObj[eqId]->SetChipPresent(hs,chip,chipPresent[eqId][hs][chip]);
358                 }
359               }
360               scanObj[eqId]->SetRowStart(rowStart[eqId]);
361               scanObj[eqId]->SetRowEnd(rowEnd[eqId]);
362               scanObj[eqId]->SetDacStart(dacStart[eqId]);
363               scanObj[eqId]->SetDacEnd(dacEnd[eqId]);
364               scanObj[eqId]->SetDacStep(dacStep[eqId]);
365             }
366
367             if (type[eqId]==MINTH) {
368               scanObj[eqId]->SetTriggers(currentStep[eqId],triggers[eqId]);
369             }
370             if (type[eqId]==UNIMA || type[eqId]==NOISE) {
371               if (currentStep[eqId]==9999) printf("SPDcalibratorStep1 (eq %d): single step\n",eqId);
372               currentStep[eqId]=0;
373             }
374             if (type[eqId]==MINTH || type[eqId]==MEANTH || type[eqId]==DAC || type[eqId]==DELAY) {
375               ((AliITSOnlineSPDscanMultiple*)scanObj[eqId])->SetDacValue(currentStep[eqId],dacValue[eqId]);
376               if (type[eqId]==DELAY) {
377                 printf("SPDcalibratorStep1 (eq %d): DAC %d/%d , step %d\n",eqId,dacValue[eqId]/2,dacHigh[eqId][0],currentStep[eqId]);
378               }
379               else {
380                 printf("SPDcalibratorStep1 (eq %d): DAC %d , step %d\n",eqId,dacValue[eqId],currentStep[eqId]);
381               }
382             }
383             if (type[eqId]==MEANTH) {
384               for (Int_t hs=0; hs<6; hs++) {
385                 ((AliITSOnlineSPDscanMeanTh*)scanObj[eqId])->SetDacLow(currentStep[eqId],hs,dacLow[eqId][hs]);
386                 ((AliITSOnlineSPDscanMeanTh*)scanObj[eqId])->SetDacHigh(currentStep[eqId],hs,dacHigh[eqId][hs]);
387                 ((AliITSOnlineSPDscanMeanTh*)scanObj[eqId])->SetTPAmp(currentStep[eqId],hs,TPAmp[eqId][hs]);
388               }
389             }
390
391
392           }
393
394           if (bScanInit[eqId]) {
395             while (str->Next()) {
396               UInt_t hs = str->GetHalfStaveNr();
397               UInt_t chip = str->GetChipAddr();
398               //***remove last condition when minthpresent put correctly in calib header?
399 #ifndef SPD_DA_OFF
400               if (type[eqId]!=MINTH || minTHchipPresent[eqId][chip] || runNr<=416900) {
401 #else
402               if (type[eqId]!=MINTH || minTHchipPresent[eqId][chip] || runNr<=416900) {
403 #endif
404                 //*************************************************************************
405                 scanObj[eqId]->IncrementHits(currentStep[eqId],hs,chip,str->GetChipCol(),str->GetChipRow());
406                 
407                 if (!hitEventHSIncremented[hs]) {
408                   scanObj[eqId]->IncrementHitEventsTot(currentStep[eqId],hs);
409                   hitEventHSIncremented[hs]=kTRUE;
410                 }
411                 
412                 if (!hitEventChipIncremented[hs][chip]) {
413                   scanObj[eqId]->IncrementHitEvents(currentStep[eqId],hs,chip);
414                   hitEventChipIncremented[hs][chip]=kTRUE;
415                 }
416               }
417
418             }
419
420             if (type[eqId]!=MINTH) { // for minth, triggers are set from header info
421               scanObj[eqId]->IncrementTriggers(currentStep[eqId]);
422             }
423
424           }
425
426         }
427
428         delete str;
429         delete reader;
430
431       }
432
433       /* free resources */
434       free(event);
435
436     }
437
438 #ifndef SPD_DA_OFF
439     daqDA_progressReport((unsigned int)( ((Float_t)(segNr-startSeg+1))/(argc-startSeg)*50 ));
440 #else
441     printf("progress: %d\n",(unsigned int)( ((Float_t)(segNr-startSeg+1))/(argc-startSeg)*50 ));
442 #endif
443
444   }
445
446   
447   // clean up scan objects (which also saves them) , check if something happened...
448     Bool_t somethingHappened = kFALSE;
449   for (UInt_t eqId=0; eqId<20; eqId++) {
450     if (scanObj[eqId]!=NULL) {
451       delete scanObj[eqId];
452       somethingHappened = kTRUE;
453     }
454   }
455   if (!somethingHappened) {
456     printf("WARNING: No data processed. Are the calibration headers missing?\n");
457   }
458
459
460
461
462   // ********* STEP 2: Analyze scan container files. ************************************************
463
464   // clear noisyToFXS and DCSconfigToFXS dirs:
465   TString command = Form("cd %s; rm -f *",saveDirNoisyToFXS);
466   system(command.Data());
467   TString command2 = Form("cd %s; rm -f *",saveDirDCSconfigToFXS);
468   system(command2.Data());
469   UInt_t nrNoisyFilesProduced=0;
470   UInt_t nrDCSconfigFilesProduced=0;
471
472   AliITSOnlineCalibrationSPDhandler* handler = new AliITSOnlineCalibrationSPDhandler();
473   AliITSOnlineSPDscanAnalyzer *analyzer = NULL;
474   AliITSOnlineCalibrationSPDhandler* handlerPermNoisy = NULL;
475   // fill permanent noisy list to add later...
476   if (permstatus==0) { 
477     handlerPermNoisy = new AliITSOnlineCalibrationSPDhandler();
478     UInt_t permNoisy = handlerPermNoisy->ReadNoisyFromText(permNoisyFileName.Data(),240); // 240 = read for all modules
479     if (permNoisy>0) {
480       printf("%d noisy pixels read from permanent list.\n",permNoisy);
481     }
482   }
483
484   Bool_t reset_made = kFALSE;
485
486   // *** *** *** start loop over equipments (eq_id)
487   for (int eqId=0; eqId<20; eqId++) {
488
489     // create analyzer for this eq
490     TString fileName = Form("%s/SPDcal_run_%d_eq_%d.root",saveDirRef,runNr,eqId);
491     analyzer = new AliITSOnlineSPDscanAnalyzer(fileName.Data(),handler);
492
493     // configure analyzer with tuning parameters etc:
494     for (UInt_t i=0; i<nrTuningParams; i++) {
495       analyzer->SetParam(((TObjString*)paramNames.At(i))->GetString().Data(),((TObjString*)paramVals.At(i))->GetString().Data());
496     }
497
498     UInt_t type  = analyzer->GetType();
499     UInt_t dacId = analyzer->GetDacId();
500     UInt_t routerNr = analyzer->GetRouterNr();
501     if (type!=99) {
502       if (type==DAC) {
503         printf("SPD scan calibrator Step2: eqId %d, type %d, dacId %d\n",eqId,type,dacId);
504       }
505       else printf("SPD scan calibrator Step2: eqId %d type %d\n",eqId,type);  
506     }
507
508
509
510     // algorithms for the different types of scans:
511
512     if (type==UNIMA) {
513
514     }
515
516     else if (type==NOISE) {
517       // read previous noisy list (clear if overwriting)
518       handler->SetFileLocation(saveDirNoisy);
519       if (analyzer->IsOverWriteSet() && !reset_made) {
520         handler->ResetNoisy();
521         handler->WriteToFilesAlways();
522         reset_made=kTRUE;
523       }
524       else {
525         handler->ReadFromFiles();
526       }
527       if (analyzer->ProcessNoisyPixels(/*saveDirNoisy*/)) {
528         if (permstatus==0) {
529           handler->AddNoisyFrom(handlerPermNoisy);
530         }
531         // init dcs config text file
532         TString dcsConfigFileName = Form("%s/dcsConfig_run_%d_eq_%d.txt",saveDirDCSconfigToFXS,runNr,eqId);
533         ofstream dcsfile;
534         dcsfile.open(dcsConfigFileName.Data());
535         dcsfile << "[SPD SCAN]\n";
536         dcsfile << "RunNumber=" << runNr << "\n";
537         dcsfile << "Type=" << type << "\n";
538         dcsfile << "Router=" << routerNr << "\n";
539         dcsfile << "ActualDetConfiguration=" << "0,-1,-1\n"; // dummy values for now
540         dcsfile << "[NOISY]\n";
541         nrDCSconfigFilesProduced++;
542
543         for (UInt_t hs=0; hs<6; hs++) {
544           for (UInt_t chip=0; chip<10; chip++) {
545             if (analyzer->IsChipPresent(hs,chip) || analyzer->IsOverWriteSet()) {
546               dcsfile << "-" << eqId << "," << hs << "," << chip << "\n";
547               UInt_t nrNoisy = handler->GetNrNoisyC(eqId,hs,chip);
548               for (UInt_t ind=0; ind<nrNoisy; ind++) {
549                 UInt_t col = handler->GetNoisyColAtC(eqId,hs,chip,ind);
550                 UInt_t row = handler->GetNoisyRowAtC(eqId,hs,chip,ind);
551                 dcsfile << col << "," << row << "\n";
552               }
553             }
554           }
555         }
556         handler->SetFileLocation(saveDirNoisy);
557         handler->WriteNoisyToFile(eqId);
558         handler->SetFileLocation(saveDirNoisyToFXS);
559         handler->WriteNoisyToFile(eqId);
560         nrNoisyFilesProduced++;
561         
562         dcsfile.close();
563       }
564     }
565
566     else if (type==MINTH || (type==DAC && dacId==39)) {
567       // init dcs config text file
568       TString dcsConfigFileName = Form("%s/dcsConfig_run_%d_eq_%d.txt",saveDirDCSconfigToFXS,runNr,eqId);
569       ofstream dcsfile;
570       dcsfile.open(dcsConfigFileName.Data());
571       dcsfile << "[SPD SCAN]\n";
572       dcsfile << "RunNumber=" << runNr << "\n";
573       dcsfile << "Type=" << type << "\n";
574       dcsfile << "Router=" << routerNr << "\n";
575       dcsfile << "ActualDetConfiguration=" << "0,-1,-1\n"; // dummy values for now
576       dcsfile << "[DACvalues]\n";
577       nrDCSconfigFilesProduced++;
578       for (UInt_t hs=0; hs<6; hs++) {
579         for (UInt_t chipNr=0; chipNr<10; chipNr++) {
580           Int_t minTh = -1;
581           if (analyzer->GetOnlineScan()->GetChipPresent(hs,chipNr)) {
582             minTh = analyzer->GetMinTh(hs,chipNr);
583             if (minTh!=-1) {
584               dcsfile << "39," << eqId << "," << hs << "," << chipNr << "=" << minTh << "\n";
585             }
586             else {
587               printf("MinTh failed for Eq %d , HS %d , Chip %d\n",eqId,hs,chipNr);
588             }
589           }
590         }
591       }
592       dcsfile.close();
593     }
594
595     else if (type==DELAY) {
596       // init dcs config text file
597       TString dcsConfigFileName = Form("%s/dcsConfig_run_%d_eq_%d.txt",saveDirDCSconfigToFXS,runNr,eqId);
598       ofstream dcsfile;
599       dcsfile.open(dcsConfigFileName.Data());
600       dcsfile << "[SPD SCAN]\n";
601       dcsfile << "RunNumber=" << runNr << "\n";
602       dcsfile << "Type=" << type << "\n";
603       dcsfile << "Router=" << routerNr << "\n";
604       dcsfile << "ActualDetCoonfiguration=" << "0,-1,-1\n"; // dummy values for now
605       dcsfile << "[DACvalues]\n";
606       nrDCSconfigFilesProduced++;
607       for (UInt_t hs=0; hs<6; hs++) {
608         for (UInt_t chipNr=0; chipNr<10; chipNr++) {
609           Int_t clockCycle = -1;
610           Int_t delayCtrl = -1;
611           Int_t miscCtrl = -1;
612           if (analyzer->GetOnlineScan()->GetChipPresent(hs,chipNr)) {
613             clockCycle = analyzer->GetDelay(hs,chipNr);
614             delayCtrl = clockCycle/2;
615             miscCtrl = 192;
616             if (clockCycle!=-1) {
617               if (clockCycle%2==1) miscCtrl = 128;
618               dcsfile << "42," << eqId << "," << hs << "," << chipNr << "=" << delayCtrl << "\n";
619               dcsfile << "43," << eqId << "," << hs << "," << chipNr << "=" << miscCtrl << "\n";
620             }
621             else {
622               printf("Delay failed for Eq %d , HS %d , Chip %d\n",eqId,hs,chipNr);
623             }
624           }
625         }
626       }
627       dcsfile.close();
628     }
629
630     delete analyzer;
631
632 #ifndef SPD_DA_OFF
633     daqDA_progressReport((unsigned int)(50+(eqId+1)*2.5));
634 #else
635     printf("progress: %d\n",(unsigned int)(50+(eqId+1)*2.5));
636 #endif
637
638   }
639   // *** *** *** end loop over equipments (eq_id)
640
641
642   delete handler;
643   if (handlerPermNoisy!=NULL) {
644     delete handlerPermNoisy;
645   }
646
647   printf("Opening id list file\n");
648   TString idsFXSFileName = Form("%s/FXSids_run_%d.txt",saveDirIdsToFXS,runNr);
649   ofstream idsFXSfile;
650   idsFXSfile.open(idsFXSFileName.Data());
651
652
653
654   // send noisy data to FXS
655   if (nrNoisyFilesProduced>0) {
656     printf("Preparing noisy files\n");
657     // send a tared file of all new noisy maps
658     TString command = Form("cd %s; tar -cf noisy_scan.tar *",saveDirNoisyToFXS);
659     //    printf("\n\n%s\n\n",command.Data());
660     system(command.Data());
661     TString fileName = Form("%s/noisy_scan.tar",saveDirNoisyToFXS);
662     TString id = "SPD_scan_noisy";
663 #ifndef SPD_DA_OFF
664     Int_t status = daqDA_FES_storeFile(fileName.Data(),id.Data());
665     if (status!=0) {
666       printf("Failed to export file %s , status %d\n",fileName.Data(),status);
667       return -1;
668     }
669 #endif
670     idsFXSfile << Form("%s\n",id.Data());
671   }
672
673   // send dcs config files to FXS
674   if (nrDCSconfigFilesProduced>0) {
675     printf("Preparing DCS config files\n");
676     // send a tared file of all the dcsConfig text files
677     TString command = Form("cd %s; tar -cf dcsConfig.tar *",saveDirDCSconfigToFXS);
678     //    printf("\n\n%s\n\n",command.Data());
679     system(command.Data());
680     TString fileName = Form("%s/dcsConfig.tar",saveDirDCSconfigToFXS);
681     TString id = "SPD_dcsConfig";
682 #ifndef SPD_DA_OFF
683     Int_t status = daqDA_FES_storeFile(fileName.Data(),id.Data());
684     if (status!=0) {
685       printf("Failed to export file %s , status %d\n",fileName.Data(),status);
686       return -1;
687     }
688 #endif
689     //idsFXSfile << Form("%s\n",id.Data()); // do NOT write this id (this is not for preprocessor)
690   }
691
692   // send reference data to FXS
693   for (UInt_t eqId=0; eqId<20; eqId++) {
694     if (bScanInit[eqId]) {
695       printf("Preparing reference data for eq %d\n",eqId);
696       TString fileName = Form("%s/SPDcal_run_%d_eq_%d.root",saveDirRef,runNr,eqId);
697       TString id = Form("SPD_ref_scan_%d",eqId);
698 #ifndef SPD_DA_OFF
699       Int_t status = daqDA_FES_storeFile(fileName.Data(),id.Data());
700       if (status!=0) {
701         printf("Failed to export file %s , status %d\n",fileName.Data(),status);
702         return -1;
703       }
704 #endif
705       idsFXSfile << Form("%s\n",id.Data());
706     }
707   }
708
709
710   printf("Preparing id list file\n");
711   idsFXSfile.close();
712   TString id = "SPD_id_list";
713 #ifndef SPD_DA_OFF
714   status = daqDA_FES_storeFile(idsFXSFileName.Data(),id.Data());
715   if (status!=0) {
716     printf("Failed to export file %s , status %d\n",idsFXSFileName.Data(),status);
717     return -1;
718   }
719 #endif
720
721
722   printf("DA finished.\n");
723
724   return 0;
725 }