remove unused code
[u/mrichter/AliRoot.git] / MUON / MUONSurveyCh3.C
1 /**************************************************************************
2  * Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. *
3  *                                                                        *
4  * Author: The ALICE Off-line Project.                                    *
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15
16 /* $Id:$ */
17
18 /// \ingroup macros
19 /// \file MUONSurveyCh3.C
20 /// \brief Macro to process survey and photogrammetry data of chamber 3
21 /// 
22 /// Macro loads the survey data from .txt file using AliSurveyObj.
23 /// Macro uses AliMUONSurvey... classes.
24 /// The transformations of the detection elements or chambers can be obtained 
25 /// in three ways:
26 /// - A: Fit of local to global transformation using the fixed button targets.
27 /// - B: Fit a plane to the sticker targets -> psi, theta
28 ///      Use above psi and theta and fit remaining 4 parameters using the fixed 
29 ///      button targets
30 /// - C: Fit a plane to the sticker targets -> psi, theta
31 ///      Use above psi and theta to calculate xc, yc, zc and phi by solving 
32 ///      the equations from a local to global transformation of the fixed button 
33 ///      targets
34 ///
35 /// Methods A and B are prefered to C, and B is better if sticker targets are 
36 /// available and lie on a plane!
37 /// For slats only methods B and C can be used.
38 /// Various histograms are filled and printed for monitoring.
39 /// MisAlignment object is then created.
40 ///
41 /// \author Javier Castillo
42
43 #if !defined(__CINT__) || defined(__MAKECINT__)
44
45 #include "AliMUONGeometryTransformer.h"
46 #include "AliMUONGeometryModuleTransformer.h"
47 #include "AliMUONGeometryDetElement.h"
48 #include "AliMUONGeometryMisAligner.h"
49 #include "AliMUONSurveyChamber.h"
50 #include "AliMUONSurveyDetElem.h"
51 #include "AliMUONSurveyUtil.h"
52
53 #include "AliSurveyObj.h"
54 #include "AliSurveyPoint.h"
55 #include "AliGeomManager.h"
56 #include "AliCDBManager.h"
57 #include "AliCDBMetaData.h"
58 #include "AliCDBId.h"
59 #include "AliAlignObjMatrix.h"
60 #include "AliAlignObj.h"
61
62 #include <TROOT.h>
63 #include <TGeoManager.h>
64 #include <TClonesArray.h>
65 #include <TObjArray.h>
66 #include <TArrayD.h>
67 #include <TMath.h>
68 #include <TString.h>
69 #include <TFitter.h>
70 #include <TH2.h>
71 #include <TF2.h>
72 #include <TGraphErrors.h>
73 #include <TCanvas.h>
74 #include <TPad.h>
75 #include <TLine.h>
76 #include <TPostScript.h>
77 #include <TPaveLabel.h>
78 #include <TStyle.h>
79 #include <TFile.h>
80 #include <TMatrixDSym.h>
81
82 #include <fstream>
83
84 #endif
85
86 void MUONSurveyCh3() {
87   
88   TString str;
89   TString title;
90   
91   Bool_t bMonitor = kTRUE;
92   Bool_t bOCDB = kTRUE;
93   Bool_t saveps = kFALSE;
94   const int cWidth = (int)(700*(29./21.));
95   const int cHeight = 700;
96   const int filetype  = 112; // landscape  
97
98   Int_t chId = 2;
99   Int_t nChs = 2;
100   Int_t nDetElems = 4;
101   Int_t nDetElemsI = 2;
102   //  Int_t nDetElemsO = 2;
103   Int_t iDetElemToDetElemId[4] = {300,301,302,303};
104   Int_t iDetElemPseudoIdToDetElem[4] = {0,1,2,3};
105   Int_t iDetElemsOfChamber[2][2] = {{0,3},
106                                     {1,2}};
107   
108   TObjArray *myChamberArray = new TObjArray(); 
109   myChamberArray->Add(new AliMUONSurveyChamber(chId));  
110   myChamberArray->Add(new AliMUONSurveyChamber(chId));  
111
112   AliMUONSurveyChamber *myChamberI = 0x0;
113   AliMUONSurveyChamber *myChamberO = 0x0;
114   AliMUONSurveyChamber *myChamber = 0x0;
115   AliMUONSurveyDetElem *myDetElem = 0x0;
116
117   myChamberI = (AliMUONSurveyChamber*)myChamberArray->At(0);
118   myChamberI->GetSurveyObj()->FillFromLocalFile("../Reports/AliceSt2_TC3_2571e.txt");
119   myChamberO = (AliMUONSurveyChamber*)myChamberArray->At(1);
120   myChamberO->GetSurveyObj()->FillFromLocalFile("../Reports/AliceSt2_TC3_2571e.txt");
121
122   myChamber = myChamberI;
123   myChamber->PrintSurveyReport();
124
125   // Chamber & DetElems button targets local coordinates
126   AliSurveyObj *lSO = new AliSurveyObj();    
127   lSO->FillFromLocalFile("$ALICE_ROOT/MUON/data/MUONTrackingTargetsLocal.txt");
128
129   // Set survey targets for chambers 
130   myChamberI->AddGButtonTargets(TString("T1_3520"),3);
131   myChamberI->AddStickerTargets(TString("T1_3620"),6);
132   myChamberI->AddLButtonTargets(lSO->GetData(),Form("%d_520",chId+1),3);
133   myChamberI->AddGButtonTargets(TString("T1_3510"),3);
134   myChamberI->AddStickerTargets(TString("T1_3610"),6);
135   myChamberI->AddLButtonTargets(lSO->GetData(),Form("%d_510",chId+1),3);
136   myChamberO->AddGButtonTargets(TString("T1_3520"),3);
137   myChamberO->AddStickerTargets(TString("T1_3620"),6);
138   myChamberO->AddLButtonTargets(lSO->GetData(),Form("%d_520",chId+1),3);
139   myChamberO->AddGButtonTargets(TString("T1_3510"),3);
140   myChamberO->AddStickerTargets(TString("T1_3610"),6);
141   myChamberO->AddLButtonTargets(lSO->GetData(),Form("%d_510",chId+1),3);
142
143   // Set survey targets for detection elements 
144   for (int iCh =0; iCh<=1; iCh++) {
145     myChamber = (AliMUONSurveyChamber*)myChamberArray->At(iCh);
146     for (int iDetElemI=0; iDetElemI<nDetElemsI; iDetElemI++){
147       Int_t iDetElem = iDetElemsOfChamber[iCh][iDetElemI];
148       myChamber->AddSurveyDetElem(iDetElemToDetElemId[iDetElem]);
149       TString baseName;
150       myDetElem =  myChamber->GetDetElem(iDetElemI);
151       if (myDetElem) {
152         baseName = Form("T1_353%d",iDetElem+1);
153         myDetElem->AddGButtonTargets(baseName,3);
154         baseName = Form("T1_363%d",iDetElem+1);
155         myDetElem->AddStickerTargets(baseName,6);
156         baseName = Form("T2_363%d",iDetElem+1);
157         myDetElem->AddStickerTargets(baseName,6);
158         baseName = Form("%d_53%d",chId+1,iDetElem+1);
159         myDetElem->AddLButtonTargets(lSO->GetData(),baseName,3);
160       }
161     }
162   }
163   printf("All targets added! \n");
164
165   Double_t **lCenDetElem = new Double_t*[nDetElems+nChs];
166   Double_t **lRotDetElem = new Double_t*[nDetElems+nChs];
167   Double_t **lDiffCenDetElem0 = new Double_t*[nDetElems+nChs];
168   Double_t **lDiffRotDetElem0 = new Double_t*[nDetElems+nChs];
169   Double_t **lDiffThCenDetElem0 = new Double_t*[nDetElems+nChs];
170   Double_t **lDiffThRotDetElem0 = new Double_t*[nDetElems+nChs];
171   Double_t **lDeltaDiffCenDetElem0 = new Double_t*[nDetElems+nChs];
172   Double_t **lDeltaDiffRotDetElem0 = new Double_t*[nDetElems+nChs];
173
174   for (int iDetElem=0; iDetElem<nDetElems+nChs; iDetElem++) {
175     lCenDetElem[iDetElem] = new Double_t[3];
176     lRotDetElem[iDetElem] = new Double_t[3];
177     lDiffCenDetElem0[iDetElem] = new Double_t[3];
178     lDiffRotDetElem0[iDetElem] = new Double_t[3];
179     lDiffThCenDetElem0[iDetElem] = new Double_t[3];
180     lDiffThRotDetElem0[iDetElem] = new Double_t[3];
181     lDeltaDiffCenDetElem0[iDetElem] = new Double_t[3];
182     lDeltaDiffRotDetElem0[iDetElem] = new Double_t[3];
183   }
184
185   TGeoCombiTrans dtrfDetElem[nDetElems+nChs];
186   TGeoCombiTrans localTrfDetElem[nDetElems+nChs];
187   TGeoCombiTrans localTrfThDetElem[nDetElems+nChs];
188
189   // Import TGeo geometry 
190   char* geoFilename = "geometry.root";
191   if ( ! AliGeomManager::GetGeometry() ) {
192     AliGeomManager::LoadGeometry(geoFilename);
193     if (! AliGeomManager::GetGeometry() ) {
194       printf("MUONSurveyCh%d: getting geometry from file %s failed\n", chId+1,geoFilename);
195       return;
196     }
197     cout << "geometry imported" << endl;
198   }
199
200   AliMUONGeometryTransformer *transform = new AliMUONGeometryTransformer();
201   transform->LoadGeometryData();
202
203   TGeoCombiTrans trfThChamber;
204   TGeoCombiTrans trfThDetElem;
205
206   for (int iCh =0; iCh<=1; iCh++) {
207     myChamber = (AliMUONSurveyChamber*)myChamberArray->At(iCh);
208
209     trfThChamber = TGeoCombiTrans(*transform->GetModuleTransformerByDEId(iDetElemToDetElemId[iCh*nDetElemsI])->GetTransformation());
210     trfThChamber.Print();
211     myChamber->SetLocalTransformation(new TGeoCombiTrans(trfThChamber),kTRUE);
212
213     // Set Chamber plane function
214     cout << "Setting plane for Chamber" << iCh+1 << " ..." << endl;
215     myChamber->SetPlane(Form("fChamber%d",iCh+1));
216     myChamber->SetPlaneParameters(0.,0.,0.);
217
218     // Fit a plane to sticker targets
219     Double_t lCChi2 = myChamber->FitPlane();
220     cout << "... chi2 = " << lCChi2 << " ..." << endl; 
221     
222     // Get best transformation from fitting method 
223     // (local to global transformation)
224     cout << "Trying fitting method for chamber " << iCh << endl;
225     myChamber->SurveyToAlign();    
226     //    myChamber->SurveyToAlign(myChamber->GetPlane()->GetParameter(0),myChamber->GetPlane()->GetParameter(1),myChamber->GetPlane()->GetParError(0),myChamber->GetPlane()->GetParError(1));    
227     
228     for (int iDetElemI=0; iDetElemI<nDetElemsI; iDetElemI++){
229       myDetElem =  myChamber->GetDetElem(iDetElemI);
230       Int_t iDetElem = iDetElemsOfChamber[iCh][iDetElemI];
231
232       trfThDetElem.Clear();
233       trfThDetElem = TGeoCombiTrans(*transform->GetDetElement(iDetElemToDetElemId[iDetElem])->GetLocalTransformation());
234       trfThDetElem.Print();
235       myDetElem->SetLocalTransformation(new TGeoCombiTrans(trfThDetElem),kTRUE);
236
237       for (int iCor=0; iCor<3; iCor++){
238         lCenDetElem[iDetElem][iCor] = 0;
239         lRotDetElem[iDetElem][iCor] = 0;
240       }
241
242       if (bMonitor){
243         // MONITOR: Draw graph with sticker targets for plane fitting
244         myDetElem->DrawSTargets();
245         gPad->Update();
246       }
247
248       // Get DetElem transformation. 
249       // Psi and Theta are obtained by fitting a plane to the sticker targets.
250       // Then Xc, Yc, Zc and Phi are obtained by solving the equations to the ref.
251       // syst. transformation of the button targets
252
253       // Set DetElem plane function
254       cout << "Setting plane for DetElem" << iDetElem+1 << " ..." << endl;
255       myDetElem->SetPlane(Form("fDetElem%d",iDetElem+1));
256       myDetElem->SetPlaneParameters(0.,0.,3.)
257 ;
258       // Fit a plane to sticker targets
259       Double_t lChi2 = myDetElem->FitPlane();
260       cout << "... chi2 = " << lChi2 << " ..." << endl; 
261       
262       lRotDetElem[iDetElem][0]=TMath::ATan(myDetElem->GetPlane()->GetParameter(0));
263       lRotDetElem[iDetElem][1]=TMath::ATan(myDetElem->GetPlane()->GetParameter(1));
264       
265       // Calculate Mean transformation using previous plane fit 
266       // and pairs of button targets
267       myDetElem->CalculateMeanTransf(lCenDetElem[iDetElem],lRotDetElem[iDetElem]);
268     
269       cout << "DetElem" << iDetElem+1 << " : mycen(" << lCenDetElem[iDetElem][0] << "," << lCenDetElem[iDetElem][1] << "," << lCenDetElem[iDetElem][2] << "); rot(" << lRotDetElem[iDetElem][0] << "," << lRotDetElem[iDetElem][1] << "," << lRotDetElem[iDetElem][2] << ")"  << endl;          
270       
271      
272       // Get best transformation from fitting method 
273       // (local to global transformation)
274       cout << "Trying fitting method for DetElemId " << iDetElemToDetElemId[iDetElem] << endl;
275       //      myDetElem->SurveyToAlign();     
276       myDetElem->SurveyToAlign(lRotDetElem[iDetElem][0],lRotDetElem[iDetElem][1],myDetElem->GetPlane()->GetParError(0),myDetElem->GetPlane()->GetParError(1));    
277     }
278   }
279
280   // Print found transformation of Detection Element (plane fit + loop)        
281   for (int iCh =0; iCh<=1; iCh++) {
282     for (int iDetElemI=0; iDetElemI<nDetElemsI; iDetElemI++){
283       Int_t iDetElem = iDetElemsOfChamber[iCh][iDetElemI];
284       cout << "DetElem" << iDetElem+1 << " : mycen(" << lCenDetElem[iDetElem][0] << "," << lCenDetElem[iDetElem][1] << "," << lCenDetElem[iDetElem][2] << "); rot(" << lRotDetElem[iDetElem][0] << "," << lRotDetElem[iDetElem][1] << "," << lRotDetElem[iDetElem][2] << ")"  << endl;          
285     }
286   }
287
288   // Print Theoretical transformation of Detection Element
289   for (int iCh =0; iCh<=1; iCh++) {
290     myChamber = (AliMUONSurveyChamber*)myChamberArray->At(iCh);
291     for (int iDetElemI=0; iDetElemI<nDetElemsI; iDetElemI++){
292       myChamber->GetDetElem(iDetElemI)->PrintLocalTrf();
293     }
294   }
295
296   // Print found delta transformation of Detection Element
297   for (int iCh =0; iCh<=1; iCh++) {
298     myChamber = (AliMUONSurveyChamber*)myChamberArray->At(iCh);      
299     for (int iDetElemI=0; iDetElemI<nDetElemsI; iDetElemI++){
300       myChamber->GetDetElem(iDetElemI)->PrintAlignTrf();
301     }
302   }
303
304   //
305   // Compare transformations to expected ones 
306   //
307   Int_t iDetElemToPos[18] = {0, 1, 2, 3};
308  
309   TGraphErrors *gDeltaDiffCenXDetElem0 = new TGraphErrors(nDetElems);
310   TGraphErrors *gDeltaDiffCenYDetElem0 = new TGraphErrors(nDetElems);
311   TGraphErrors *gDeltaDiffCenZDetElem0 = new TGraphErrors(nDetElems);
312   TGraphErrors *gDeltaDiffPsiDetElem0 = new TGraphErrors(nDetElems);
313   TGraphErrors *gDeltaDiffThtDetElem0 = new TGraphErrors(nDetElems);
314   TGraphErrors *gDeltaDiffPhiDetElem0 = new TGraphErrors(nDetElems);
315
316   for (int iCh =0; iCh<=1; iCh++) {
317     myChamber = (AliMUONSurveyChamber*)myChamberArray->At(iCh);      
318     for (int iDetElemI=0; iDetElemI<nDetElemsI; iDetElemI++){
319       myChamber->GetDetElem(iDetElemI)->GetAlignTrf()->Print();
320     }
321   }
322
323   for (int iCh =0; iCh<=1; iCh++) {
324     myChamber = (AliMUONSurveyChamber*)myChamberArray->At(iCh);
325     // Store delta transformations to use for CDB entry creation
326     dtrfDetElem[nDetElems+iCh].Clear();
327     dtrfDetElem[nDetElems+iCh] = *(myChamber->GetAlignTrf());
328
329     // Those are for checks and visualizations
330     localTrfDetElem[nDetElems+iCh].Clear();
331     localTrfDetElem[nDetElems+iCh] = (*(myChamber->GetLocalTrf())*(*(myChamber->GetAlignTrf())));
332     localTrfDetElem[nDetElems+iCh].Print();
333     lDiffCenDetElem0[nDetElems+iCh] = (Double_t*)localTrfDetElem[nDetElems+iCh].GetTranslation();
334     AliMUONSurveyUtil::MatrixToAngles(localTrfDetElem[nDetElems+iCh].GetRotationMatrix(),lDiffRotDetElem0[nDetElems+iCh]);
335     
336     localTrfThDetElem[nDetElems+iCh].Clear();
337     localTrfThDetElem[nDetElems+iCh] = (*(myChamber->GetLocalTrf()));
338     localTrfThDetElem[nDetElems+iCh].Print();
339     lDiffThCenDetElem0[nDetElems+iCh] = (Double_t*)localTrfThDetElem[nDetElems+iCh].GetTranslation();
340     AliMUONSurveyUtil::MatrixToAngles(localTrfThDetElem[nDetElems+iCh].GetRotationMatrix(),lDiffThRotDetElem0[nDetElems+iCh]);
341
342     for (int iCor=0; iCor<3; iCor++){
343       lDeltaDiffCenDetElem0[nDetElems+iCh][iCor] = lDiffCenDetElem0[nDetElems+iCh][iCor]-lDiffThCenDetElem0[nDetElems+iCh][iCor];
344       lDeltaDiffRotDetElem0[nDetElems+iCh][iCor] = lDiffRotDetElem0[nDetElems+iCh][iCor]-lDiffThRotDetElem0[nDetElems+iCh][iCor];
345       if (lDeltaDiffRotDetElem0[nDetElems+iCh][iCor]>TMath::Pi()) lDeltaDiffRotDetElem0[nDetElems+iCh][iCor]-=TMath::TwoPi();
346       if (lDeltaDiffRotDetElem0[nDetElems+iCh][iCor]<-TMath::Pi()) lDeltaDiffRotDetElem0[nDetElems+iCh][iCor]+=TMath::TwoPi();
347     }      
348
349     for (int iDetElemI=0; iDetElemI<nDetElemsI; iDetElemI++){
350       Int_t iDetElem = iDetElemsOfChamber[iCh][iDetElemI];
351       myDetElem =  myChamber->GetDetElem(iDetElemI);
352       // Store delta transformations to use for CDB entry creation
353       dtrfDetElem[iDetElem].Clear();
354       dtrfDetElem[iDetElem] = *(myDetElem->GetAlignTrf());
355
356       // Those are for checks and visualizations
357       localTrfDetElem[iDetElem].Clear();
358       localTrfDetElem[iDetElem] = (*(myDetElem->GetLocalTrf())*(*(myDetElem->GetAlignTrf())));
359       //      localTrfDetElem[iDetElem] = (*(myDetElem->GetBaseTrf())*(*(myDetElem->GetAlignTrf())));
360       localTrfDetElem[iDetElem].Print();
361       lDiffCenDetElem0[iDetElem] = (Double_t*)localTrfDetElem[iDetElem].GetTranslation();
362       AliMUONSurveyUtil::MatrixToAngles(localTrfDetElem[iDetElem].GetRotationMatrix(),lDiffRotDetElem0[iDetElem]);
363 //       lDiffCenDetElem0[iDetElem] = lCenDetElem[iDetElem];
364 //       lDiffRotDetElem0[iDetElem] = lRotDetElem[iDetElem];
365
366       localTrfThDetElem[iDetElem].Clear();
367       localTrfThDetElem[iDetElem] = (*(myDetElem->GetLocalTrf()));
368       //      localTrfThDetElem[iDetElem] = (*(myDetElem->GetBaseTrf()));
369       localTrfThDetElem[iDetElem].Print();
370       lDiffThCenDetElem0[iDetElem] = (Double_t*)localTrfThDetElem[iDetElem].GetTranslation();
371       AliMUONSurveyUtil::MatrixToAngles(localTrfThDetElem[iDetElem].GetRotationMatrix(),lDiffThRotDetElem0[iDetElem]);
372       
373       for (int iCor=0; iCor<3; iCor++){
374         lDeltaDiffCenDetElem0[iDetElem][iCor] = lDiffCenDetElem0[iDetElem][iCor]-lDiffThCenDetElem0[iDetElem][iCor];
375         lDeltaDiffRotDetElem0[iDetElem][iCor] = lDiffRotDetElem0[iDetElem][iCor]-lDiffThRotDetElem0[iDetElem][iCor];
376         if (lDeltaDiffRotDetElem0[iDetElem][iCor]>TMath::Pi()) lDeltaDiffRotDetElem0[iDetElem][iCor]-=TMath::TwoPi();
377         if (lDeltaDiffRotDetElem0[iDetElem][iCor]<-TMath::Pi()) lDeltaDiffRotDetElem0[iDetElem][iCor]+=TMath::TwoPi();
378       }
379
380       gDeltaDiffCenXDetElem0->SetPoint(iDetElem,1e1*lDeltaDiffCenDetElem0[iDetElem][0],iDetElemToPos[iDetElem]+1);
381       gDeltaDiffCenYDetElem0->SetPoint(iDetElem,1e1*lDeltaDiffCenDetElem0[iDetElem][1],iDetElemToPos[iDetElem]+1);
382       gDeltaDiffCenZDetElem0->SetPoint(iDetElem,1e1*lDeltaDiffCenDetElem0[iDetElem][2],iDetElemToPos[iDetElem]+1);
383       gDeltaDiffPsiDetElem0->SetPoint(iDetElem,1e3*lDeltaDiffRotDetElem0[iDetElem][0],iDetElemToPos[iDetElem]+1);
384       gDeltaDiffThtDetElem0->SetPoint(iDetElem,1e3*lDeltaDiffRotDetElem0[iDetElem][1],iDetElemToPos[iDetElem]+1);
385       gDeltaDiffPhiDetElem0->SetPoint(iDetElem,1e3*lDeltaDiffRotDetElem0[iDetElem][2],iDetElemToPos[iDetElem]+1);
386       gDeltaDiffCenXDetElem0->SetPointError(iDetElem,1e1*myDetElem->GetFitter()->GetParError(0),0.);
387       gDeltaDiffCenYDetElem0->SetPointError(iDetElem,1e1*myDetElem->GetFitter()->GetParError(1),0.);
388       gDeltaDiffCenZDetElem0->SetPointError(iDetElem,1e1*myDetElem->GetFitter()->GetParError(2),0.);
389       gDeltaDiffPsiDetElem0->SetPointError(iDetElem,1e3*myDetElem->GetFitter()->GetParError(3),0.);
390       gDeltaDiffThtDetElem0->SetPointError(iDetElem,1e3*myDetElem->GetFitter()->GetParError(4),0.);
391       gDeltaDiffPhiDetElem0->SetPointError(iDetElem,1e3*myDetElem->GetFitter()->GetParError(5),0.);  
392     }
393   }
394
395   // Apply the found misalignments to the geometry
396   AliMUONGeometryTransformer *newTransform = AliMUONSurveyUtil::ReAlign(transform,chId,nDetElems,iDetElemPseudoIdToDetElem,dtrfDetElem,true); 
397   newTransform->WriteTransformations(Form("transform2ReAlignSurveyCh%d.dat",chId+1));
398
399   if(bOCDB){
400     // Generate realigned data in local cdb
401     const TClonesArray* array = newTransform->GetMisAlignmentData();
402     
403     // Set the alignment resolution in the align objects for this chamber
404     Double_t chResX = myChamberI->GetAlignResX();
405     Double_t chResY = myChamberI->GetAlignResY();
406     Double_t deResX = (myChamberI->GetMeanDetElemAlignResX()+myChamberO->GetMeanDetElemAlignResX())/2.;
407     Double_t deResY = (myChamberI->GetMeanDetElemAlignResY()+myChamberO->GetMeanDetElemAlignResY())/2.;
408     printf("Chamber alignment resolutions: resX=%f , resY=%f\n",chResX,chResY); 
409     printf("Detection Elements alignment resolutions: resX=%f , resY=%f\n",deResX,deResY); 
410     chResX = TMath::Sqrt(0.1*0.1+chResX*chResX);
411     chResY = TMath::Sqrt(0.1*0.1+chResY*chResY);
412     AliMUONSurveyUtil::SetAlignmentResolution(array,chId,chResX,chResY,deResX,deResY);
413     
414     // CDB manager
415     AliCDBManager* cdbManager = AliCDBManager::Instance();
416     cdbManager->SetDefaultStorage(Form("local://ReAlignSurveyCh%dCDB",chId+1));
417     
418     AliCDBMetaData* cdbData = new AliCDBMetaData();
419     cdbData->SetResponsible("Dimuon Offline project");
420     cdbData->SetComment("MUON alignment objects with survey realignment");
421     AliCDBId id("MUON/Align/Data", 0, AliCDBRunRange::Infinity()); 
422     cdbManager->Put(const_cast<TClonesArray*>(array), id, cdbData);
423   }
424
425   for(Int_t iCor=0; iCor<3; iCor++){
426     for(Int_t iDetElem=0; iDetElem<nDetElems; iDetElem++){
427       cout << lDeltaDiffCenDetElem0[iDetElem][iCor] << " " << lDiffCenDetElem0[iDetElem][iCor] << " " << lDiffThCenDetElem0[iDetElem][iCor] << endl;
428     }
429     cout << endl;
430   }
431   cout << endl;
432   for(Int_t iCor=0; iCor<3; iCor++){
433     for(Int_t iDetElem=0; iDetElem<nDetElems; iDetElem++){
434       cout << lDeltaDiffRotDetElem0[iDetElem][iCor] << " " << lDiffRotDetElem0[iDetElem][iCor] << " " << lDiffThRotDetElem0[iDetElem][iCor] << endl;
435     }
436     cout << endl;
437   }
438
439   TH1F *myDetElemDeltaDiffCenX = new TH1F("myDetElemDeltaDiffCenX","myDetElemDeltaDiffCenX",100,-10,10);
440   myDetElemDeltaDiffCenX->SetMaximum(nDetElems+1);
441   myDetElemDeltaDiffCenX->SetMinimum(0);
442   TH1F *myDetElemDeltaDiffCenY = new TH1F("myDetElemDeltaDiffCenY","myDetElemDeltaDiffCenY",100,-10,10);
443   myDetElemDeltaDiffCenY->SetMaximum(nDetElems+1);
444   myDetElemDeltaDiffCenY->SetMinimum(0);
445   TH1F *myDetElemDeltaDiffCenZ = new TH1F("myDetElemDeltaDiffCenZ","myDetElemDeltaDiffCenZ",100,-20,20);
446   myDetElemDeltaDiffCenZ->SetMaximum(nDetElems+1);
447   myDetElemDeltaDiffCenZ->SetMinimum(0);
448
449   TH1F *myDetElemDeltaDiffRotX = new TH1F("myDetElemDeltaDiffRotX","myDetElemDeltaDiffRotX",100,-15,15);
450   myDetElemDeltaDiffRotX->SetMaximum(nDetElems+1);
451   myDetElemDeltaDiffRotX->SetMinimum(0);
452   TH1F *myDetElemDeltaDiffRotY = new TH1F("myDetElemDeltaDiffRotY","myDetElemDeltaDiffRotY",100,-15,15);
453   myDetElemDeltaDiffRotY->SetMaximum(nDetElems+1);
454   myDetElemDeltaDiffRotY->SetMinimum(0);
455   TH1F *myDetElemDeltaDiffRotZ = new TH1F("myDetElemDeltaDiffRotZ","myDetElemDeltaDiffRotZ",100,-5,5);
456   myDetElemDeltaDiffRotZ->SetMaximum(nDetElems+1);
457   myDetElemDeltaDiffRotZ->SetMinimum(0);
458
459   //
460   // ******** Starting plots 
461   //
462   TCanvas *canvas;
463   TPad *pad;
464   TPaveLabel *theTitle;
465   gStyle->SetPalette(1);
466
467   TPostScript *ps = 0;
468   
469   if( saveps ){
470     ps = new TPostScript(Form("surveyChamber%d",chId+1),filetype); 
471     ps->NewPage();
472   }
473
474   // Observed misalignments
475   str = Form("Chamber %d",chId+1);
476   TCanvas *cvn2 = new TCanvas("cvn2",str,cWidth,cHeight);
477   canvas = cvn2;
478   canvas->Range(0,0,21,29);
479   
480   title = Form(" MisAlignments Chamber %d - PL2G - In Single Frame ",chId+1);
481   TPaveLabel *theTitle2 = new TPaveLabel(3,27.0,18,28.5,title,"br");
482   theTitle = theTitle2;
483   theTitle->SetFillColor(18);
484   theTitle->SetTextFont(32);
485   theTitle->SetTextSize(0.4);
486   theTitle->SetTextColor(1);
487   theTitle->Draw();
488  
489   TPad *pad2 = new TPad("pad2","pad2",0.01,0.01,0.98,0.91,0);
490   pad = pad2;
491   pad->Draw();
492   TLine *ch0Line = new TLine(0,1,0,2);
493   TLine *ch1Line = new TLine(0,1,0,2);
494   ch1Line->SetLineStyle(2);
495   pad->Divide(3,2);
496   
497   pad->cd(1);
498   myDetElemDeltaDiffCenX->Draw();
499   myDetElemDeltaDiffCenX->SetXTitle("#Delta[xc_{i}^{m}-xc_{i}^{th}] (mm)");
500   myDetElemDeltaDiffCenX->SetYTitle("DetElem arbitrary ordering");
501   gDeltaDiffCenXDetElem0->SetMarkerStyle(20);
502   gDeltaDiffCenXDetElem0->Draw("P");
503   ch0Line->DrawLine(1e1*lDeltaDiffCenDetElem0[nDetElems+0][0],0.5,1e1*lDeltaDiffCenDetElem0[nDetElems+0][0],1.5);
504   ch0Line->DrawLine(1e1*lDeltaDiffCenDetElem0[nDetElems+0][0],3.5,1e1*lDeltaDiffCenDetElem0[nDetElems+0][0],4.5);
505   ch1Line->DrawLine(1e1*lDeltaDiffCenDetElem0[nDetElems+1][0],1.5,1e1*lDeltaDiffCenDetElem0[nDetElems+1][0],3.5);
506
507   pad->cd(2);
508   myDetElemDeltaDiffCenY->Draw();
509   myDetElemDeltaDiffCenY->SetXTitle("#Delta[yc_{i}^{m}-yc_{i}^{th}] (mm)");
510   myDetElemDeltaDiffCenY->SetYTitle("DetElem arbitrary ordering");
511   gDeltaDiffCenYDetElem0->SetMarkerStyle(20);
512   gDeltaDiffCenYDetElem0->Draw("P");
513   ch0Line->DrawLine(1e1*lDeltaDiffCenDetElem0[nDetElems+0][1],0.5,1e1*lDeltaDiffCenDetElem0[nDetElems+0][1],1.5);
514   ch0Line->DrawLine(1e1*lDeltaDiffCenDetElem0[nDetElems+0][1],3.5,1e1*lDeltaDiffCenDetElem0[nDetElems+0][1],4.5);
515   ch1Line->DrawLine(1e1*lDeltaDiffCenDetElem0[nDetElems+1][1],1.5,1e1*lDeltaDiffCenDetElem0[nDetElems+1][1],3.5);
516
517   pad->cd(3);
518   myDetElemDeltaDiffCenZ->Draw();
519   myDetElemDeltaDiffCenZ->SetXTitle("#Delta[zc_{i}^{m}-zc_{i}^{th}] (mm)");
520   myDetElemDeltaDiffCenZ->SetYTitle("DetElem arbitrary ordering");
521   gDeltaDiffCenZDetElem0->SetMarkerStyle(20);
522   gDeltaDiffCenZDetElem0->Draw("P");
523   ch0Line->DrawLine(1e1*lDeltaDiffCenDetElem0[nDetElems+0][2],0.5,1e1*lDeltaDiffCenDetElem0[nDetElems+0][2],1.5);
524   ch0Line->DrawLine(1e1*lDeltaDiffCenDetElem0[nDetElems+0][2],3.5,1e1*lDeltaDiffCenDetElem0[nDetElems+0][2],4.5);
525   ch1Line->DrawLine(1e1*lDeltaDiffCenDetElem0[nDetElems+1][2],1.5,1e1*lDeltaDiffCenDetElem0[nDetElems+1][2],3.5);
526
527   pad->cd(4);
528   myDetElemDeltaDiffRotX->Draw();
529   myDetElemDeltaDiffRotX->SetXTitle("#Delta[#psi_{i}^{m}-#psi_{i}^{th}] (mrad)");
530   myDetElemDeltaDiffRotX->SetYTitle("DetElem arbitrary ordering");
531   gDeltaDiffPsiDetElem0->SetMarkerStyle(20);
532   gDeltaDiffPsiDetElem0->Draw("P");
533   ch0Line->DrawLine(1e3*lDeltaDiffRotDetElem0[nDetElems+0][0],0.5,1e3*lDeltaDiffRotDetElem0[nDetElems+0][0],1.5);
534   ch0Line->DrawLine(1e3*lDeltaDiffRotDetElem0[nDetElems+0][0],3.5,1e3*lDeltaDiffRotDetElem0[nDetElems+0][0],4.5);
535   ch1Line->DrawLine(1e3*lDeltaDiffRotDetElem0[nDetElems+1][0],1.5,1e3*lDeltaDiffRotDetElem0[nDetElems+1][0],3.5);
536
537   pad->cd(5);
538   myDetElemDeltaDiffRotY->Draw();
539   myDetElemDeltaDiffRotY->SetXTitle("#Delta[#theta_{i}^{m}-#theta_{i}^{th}] (mrad)");
540   myDetElemDeltaDiffRotY->SetYTitle("DetElem arbitrary ordering");
541   gDeltaDiffThtDetElem0->SetMarkerStyle(20);
542   gDeltaDiffThtDetElem0->Draw("P");
543   ch0Line->DrawLine(1e3*lDeltaDiffRotDetElem0[nDetElems+0][1],0.5,1e3*lDeltaDiffRotDetElem0[nDetElems+0][1],1.5);
544   ch0Line->DrawLine(1e3*lDeltaDiffRotDetElem0[nDetElems+0][1],3.5,1e3*lDeltaDiffRotDetElem0[nDetElems+0][1],4.5);
545   ch1Line->DrawLine(1e3*lDeltaDiffRotDetElem0[nDetElems+1][1],1.5,1e3*lDeltaDiffRotDetElem0[nDetElems+1][1],3.5);
546
547   pad->cd(6);
548   myDetElemDeltaDiffRotZ->Draw();
549   myDetElemDeltaDiffRotZ->SetXTitle("#Delta[#phi_{i}^{m}-#phi_{i}^{th}] (mrad)");
550   myDetElemDeltaDiffRotZ->SetYTitle("DetElem arbitrary ordering");
551   gDeltaDiffPhiDetElem0->SetMarkerStyle(20);
552   gDeltaDiffPhiDetElem0->Draw("P");
553   ch0Line->DrawLine(1e3*lDeltaDiffRotDetElem0[nDetElems+0][2],0.5,1e3*lDeltaDiffRotDetElem0[nDetElems+0][2],1.5);
554   ch0Line->DrawLine(1e3*lDeltaDiffRotDetElem0[nDetElems+0][2],3.5,1e3*lDeltaDiffRotDetElem0[nDetElems+0][2],4.5);
555   ch1Line->DrawLine(1e3*lDeltaDiffRotDetElem0[nDetElems+1][2],1.5,1e3*lDeltaDiffRotDetElem0[nDetElems+1][2],3.5);
556
557   pad->Update();
558  
559   if(bMonitor){    
560     // MONITOR: Histograms for monitoring
561     TH2F *hCPSTa = new TH2F("hCPSTa","hCPSTa",100,-200,200,100,-200,200);
562     TH2F *hCPSTc = new TH2F("hCPSTc","hCPSTc",100,-200,200,100,-200,200);
563     TH2F *hSSTa = new TH2F("hSSTa","hSSTa",100,-200,200,100,-200,200);
564     TH2F *hSSTc = new TH2F("hSSTc","hSSTc",100,-200,200,100,-200,200);
565     TH2F *hSSTap = new TH2F("hSSTap","hSSTap",800,-200,200,800,-200,200);
566     TH2F *hSSTcp = new TH2F("hSSTcp","hSSTcp",800,-200,200,800,-200,200);
567     
568     // MONITOR: Fill histograms with chambers and slats sticker target positions
569     for (int iCh =0; iCh<=1; iCh++) {
570       myChamber = (AliMUONSurveyChamber*)myChamberArray->At(iCh);            
571       cout << "Filling histograms of sticker target for chamber" << iCh+1 << " ..." << endl;
572       myChamber->FillCPSTHistograms(Form("T1_36%d",2-iCh),hCPSTc);
573       myChamber->FillDESTHistograms(TString("T1_36"),hSSTc,TString("T2_36"),hSSTa);
574
575       for (int iDetElemI=0; iDetElemI<nDetElemsI; iDetElemI++){
576         //      Int_t iDetElem = iDetElemsOfChamber[iCh][iDetElemI];
577         myDetElem =  myChamber->GetDetElem(iDetElemI);
578         // MONITOR: Fill slat plane for fit monitor.
579         Double_t pl[3] = {0};
580         Double_t pg[3] = {0};
581         AliSurveyPoint *pointSBT0 = myDetElem->GetLButtonTarget(0);
582         AliSurveyPoint *pointSBT1 = myDetElem->GetLButtonTarget(2);
583         if(pointSBT0&&pointSBT1) {
584           if (pointSBT0->GetX()>pointSBT1->GetX()){
585             pointSBT0=myDetElem->GetLButtonTarget(2);
586             pointSBT1=myDetElem->GetLButtonTarget(0);
587           }
588           Double_t lX = pointSBT0->GetX();
589           while(lX<pointSBT1->GetX()){
590             Double_t lY = pointSBT1->GetY()-50;
591             while(lY<pointSBT1->GetY()+50){
592               pl[0] = lX;  pl[1] = lY;  pl[2] = 0.;
593               (TGeoCombiTrans((*(myDetElem->GetBaseTrf()))*(*(myDetElem->GetAlignTrf())))).LocalToMaster(pl,pg);
594               if(myDetElem->GetGButtonTarget(0)->GetPointName().Contains("A")){
595                 if (hSSTap->GetBinContent(hSSTap->FindBin(pg[0],pg[1]))==0)
596                   hSSTap->Fill(pg[0],pg[1],-pg[2]);
597               }
598               else {
599                 if (hSSTcp->GetBinContent(hSSTcp->FindBin(pg[0],pg[1]))==0)
600                   hSSTcp->Fill(pg[0],pg[1],-pg[2]);
601               }
602               lY+=hSSTap->GetYaxis()->GetBinWidth(1);
603             }
604             lX+=hSSTap->GetXaxis()->GetBinWidth(1);
605           }
606         }
607       }
608     }
609
610     if( saveps ){
611       ps->NewPage();
612     }
613
614     // View from side A
615     str = Form("Chamber %d - side A",chId+1);
616     TCanvas *cvn0 = new TCanvas("cvn0",str,cWidth,cHeight);
617     canvas = cvn0;
618     canvas->Range(0,0,21,29);
619   
620     title = Form(" Deformations of chamber %d - View from side A ",chId+1);
621     TPaveLabel *theTitle0 = new TPaveLabel(3,27.0,18,28.5,title,"br");
622     theTitle = theTitle0;
623     theTitle->SetFillColor(18);
624     theTitle->SetTextFont(32);
625     theTitle->SetTextSize(0.4);
626     theTitle->SetTextColor(1);
627     theTitle->Draw();
628  
629     TPad *pad0 = new TPad("pad0","pad0",0.01,0.01,0.98,0.91,0);
630     pad = pad0;
631     pad->Draw();
632     pad->Divide(2,2);
633
634     Double_t lMin, lMax;
635
636     pad->cd(1);
637     hCPSTa->SetMinimum(950);
638     hCPSTa->SetMaximum(975);
639 //     hCPSTa->Draw("lego2z");
640
641     pad->cd(2);
642     lMin = hSSTa->GetMinimum(0);
643     hSSTa->SetMinimum(TMath::Floor(lMin));
644     lMax = hSSTa->GetMaximum();
645     hSSTa->SetMaximum(TMath::Ceil(lMax));
646     hSSTa->Draw("lego2z");
647
648     pad->cd(3);
649
650     pad->cd(4);
651 //     lMin = hSSTap->GetMinimum(0);
652 //     hSSTap->SetMinimum(TMath::Floor(lMin));
653 //     lMax = hSSTap->GetMaximum();
654 //     hSSTap->SetMaximum(TMath::Ceil(lMax));
655 //     hSSTap->Draw("surf2z");
656
657     pad->Update();
658     if(saveps){
659       ps->NewPage();
660     }
661
662     // Inv Mass, Multiplicity
663     str = Form("Chamber %d - side C",chId+1);
664     TCanvas *cvn1 = new TCanvas("cvn1",str,cWidth,cHeight);
665     canvas = cvn1;
666     canvas->Range(0,0,21,29);
667
668     title = Form(" Deformations of chamber %d - View from side C ",chId+1);
669     TPaveLabel *theTitle1 = new TPaveLabel(3,27.0,18,28.5,title,"br");
670     theTitle = theTitle1;
671     theTitle->SetFillColor(18);
672     theTitle->SetTextFont(32);
673     theTitle->SetTextSize(0.4);
674     theTitle->SetTextColor(1);
675     theTitle->Draw();
676  
677     TPad *pad1 = new TPad("pad1","pad1",0.01,0.01,0.98,0.91,0);
678     pad = pad1;
679     pad->Draw();
680     pad->Divide(2,2);
681
682     pad->cd(1);
683     lMin = hCPSTc->GetMinimum(0);
684     hCPSTc->SetMinimum(TMath::Floor(lMin));
685     lMax = hCPSTc->GetMaximum();
686     hCPSTc->SetMaximum(TMath::Ceil(lMax));
687     hCPSTc->Draw("lego2z");
688
689     pad->cd(2);
690     lMin = hSSTc->GetMinimum(0);
691     hSSTc->SetMinimum(TMath::Floor(lMin));
692     lMax = hSSTc->GetMaximum();
693     hSSTc->SetMaximum(TMath::Ceil(lMax));
694     hSSTc->Draw("lego2z");
695
696     pad->cd(3);
697
698     pad->cd(4);
699     lMin = hSSTcp->GetMinimum(0);
700     hSSTcp->SetMinimum(TMath::Floor(lMin));
701     lMax = hSSTcp->GetMaximum();
702     hSSTcp->SetMaximum(TMath::Ceil(lMax));
703     hSSTcp->Draw("surf2z");
704   }
705
706   pad->Update();
707   if( saveps ){
708     ps->Close();
709   }
710
711   TFile *hFile = new TFile(Form("spCH%d_PL2G_ISF.root",chId+1),"RECREATE");
712   gDeltaDiffCenXDetElem0->Write("gDeltaDiffCenXDetElem0");
713   gDeltaDiffCenYDetElem0->Write("gDeltaDiffCenYDetElem0");
714   gDeltaDiffCenZDetElem0->Write("gDeltaDiffCenZDetElem0");
715   gDeltaDiffPsiDetElem0->Write("gDeltaDiffPsiDetElem0");
716   gDeltaDiffThtDetElem0->Write("gDeltaDiffThtDetElem0");
717   gDeltaDiffPhiDetElem0->Write("gDeltaDiffPhiDetElem0");
718   myDetElemDeltaDiffCenX->Write();
719   myDetElemDeltaDiffCenY->Write();
720   myDetElemDeltaDiffCenZ->Write();
721   myDetElemDeltaDiffRotX->Write();
722   myDetElemDeltaDiffRotY->Write();
723   myDetElemDeltaDiffRotZ->Write();
724   hFile->Close();
725   hFile->Delete();
726 }