1 //===================== ANALYSIS TRAIN =========================================
2 // To use: copy this macro to your work directory, modify the global part to match
3 // your needs, then run root.
4 // root[0] .L AnalysisTrain.C
5 // Grid full mode as below (other modes: test, offline, submit, terminate)
6 // root[1] AnalysisTrainPWG-244Jets("grid", "full")
7 // CAF mode (requires root v5-23-02 + aliroot v4-16-Rev08)
8 // root[2] AnalysisTrainPWG4Jets("proof")
9 // Local mode requires AliESds.root or AliAOD.root in ./data directory
10 // root[3] AnalysisTrainPWG4Jets("local")
11 // In proof and grid modes, a token is needed and sourcing the produced environment file.
13 // If 'saveTrain' flag is set, the train will generate a directory name and run
14 // in this directory. A configuration file 'ConfigTrain.C' will be generated.
15 // One can replay at any time the train via:
16 // root[1] AnalysisTrainPWG4Jets(ana_mode, plugin_mode, "train_default_<date>/ConfigTrain.C")
18 // For Usage with fastjet run in "offline" first and then "submit"
19 // jdl and analysismacro are automatically patched after "offline" mode
21 // =============================================================================
22 // ### General Steering variables
23 // =============================================================================
24 //== general setup variables
25 TString kTrainName = "testAnalysis"; // *CHANGE ME* (no blancs or special characters)
26 TString kJobTag = "PWG4 Jet Tasks analysis train configured"; // *CHANGE ME*
28 // Usage of par files ONLY in grid mode and ONLY if the code is not available
29 // in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
30 // To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
32 Bool_t kUsePAR = kFALSE; // use par files for extra libs
33 Bool_t kUseCPAR = kFALSE; // use par files for common libs
34 Bool_t kFillAOD = kFALSE; // switch of AOD filling for on the fly analysis
35 Bool_t kFilterAOD = kTRUE;
36 Int_t kSaveAOD = 8; // Bit switch 1 = Full AOD 2 = Jet AOD , 4 = PartCorr, 8 = JCORRAN
37 //== general input and output variables
39 Int_t iAODanalysis = 1; // Analysis on input AOD's
40 Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
41 Int_t iCentralitySelection = 0; // Use the centrality
42 Int_t iESDfilter = 0; // ESD to AOD filter (barrel + muon tracks)
43 Int_t iPhysicsSelection = 1; // ESD to AOD filter (barrel + muon tracks)
44 UInt_t iPhysicsSelectionFlag = 1; // set by pyshics selection and passed to the task, kMB, kUserDefined etc
45 Bool_t useTender = kFALSE; // use tender wagon
46 Bool_t kUseKinefilter = kFALSE; // use Kinematics filter
47 Bool_t kUseMuonfilter = kFALSE; // use Kinematics filter
48 TString kCommonOutputFileName = "PWG4_JetTasksOutput.root";
49 TString kCaloQAOutputFileName = "PWG4_CaloQAOutput.root";
52 //== general process variables
54 // ### Other flags to steer the analysis
55 //==============================================================================
56 Bool_t kSkipTerminate = kTRUE; // Do not call Teminate
57 Bool_t kUseDate = kFALSE; // use date in train name
58 Bool_t kUseDebug = kTRUE; // activate debugging
59 Int_t kErrorIgnoreLevel = -1; // takes the errror print level from .rootrc
61 // const Int_t kUnset = -1;
62 // const Int_t kPrint = 0;
63 // const Int_t kInfo = 1000;
64 // const Int_t kWarning = 2000;
65 // const Int_t kError = 3000;
66 // const Int_t kBreak = 4000;
67 // const Int_t kSysError = 5000;
68 // const Int_t kFatal = 6000;
69 Int_t kUseSysInfo = 0; // activate debugging
70 Long64_t kNumberOfEvents = 1234567890; // number of events to process from the chain
71 Bool_t kUseMC = kTRUE; // use MC info
72 Bool_t kIsMC = kTRUE; // is MC info, if false it overwrites Use(AOD)MC
73 Bool_t kUseAODMC = kTRUE; // use MC infA
74 Bool_t kUseESDTags = kFALSE; // use ESD tags for selection
75 Bool_t kUseTR = kFALSE; // use track references
76 Bool_t kUseAODTags = kFALSE; // use AOD tags
77 Bool_t kSaveTrain = kFALSE; // save train configuration as:
78 Bool_t kIsPbPb = kFALSE; // Pb+Pb
81 // ### Analysis modules to be included. Some may not be yet fully implemented.
82 //==============================================================================
83 Int_t iJETAN = 1; // Jet analysis (PWG4) // 1 write standard 2 write non-standard jets, 3 wrtie both
84 Int_t iJETSUBTRACT = 1; // Jet background subtration
85 TString kDefaultJetBranch = ""; // is currently set when filled (iJETAN or clusters) or from config macro
86 TString kDefaultJetBackgroundBranch = ""; // is currently set when filled (jet clsuters
87 TString kDefaultJetBackgroundBranch_extra = ""; // is currently set when filled (jet clsuters
88 TString kJetSubtractBranches = ""; // is currently set when filled (jet clsuters
89 TString kJetSubtractBranches_extra = ""; // is currently set when filled (jet clsuters
91 TString kDefaultJetBranchMC = ""; // is currently set when filled (iJETAN or clusters) or from config macro
92 TString kDefaultJetBackgroundBranchMC = ""; // is currently set when filled (jet clsuters
93 TString kDefaultJetBranchMC2 = ""; // is currently set when filled (iJETAN or clusters) or from config macro
94 TString kDefaultJetBackgroundBranchMC2 = ""; // is currently set when filled (jet clsuters
95 TString kJetSubtractMask1 = "B0";
96 TString kJetSubtractMask2 = "B%d";
99 Int_t iPWG1QASym = 0; // Eva's QA task compiled on the fly...
100 Int_t iPWG4FastEmbedding = 0; // Generate non-standard AOD for embedding
101 Int_t iPWG4JetTasks = 0; // all jet tasks flag for lib laoding
102 Int_t iPWG4JetServices = 0; // jet spectrum analysis
103 Int_t iPWG4JetSpectrum = 0; // jet spectrum analysis
104 Int_t iPWG4JetResponse = 0; // jet response matrix
105 Int_t iPWG4JCORRAN = 0; // JCORRAN module
106 Int_t iPWG4UE = 0; // Underlying Event analysis
107 Int_t iPWG4LeadingUE = 0; // Underlying Event analysis
108 Int_t iPWG4CorrectionsUE = 0; // Underlying Event analysis
109 Int_t iPWG4TmpSourceSara = 0; // Underlying Event analysis not in svn
110 Int_t iPWG4Fragmentation = 0; // Official Fragmentation
111 Int_t iPWG4JetChem = 0; // Jet chemistry
112 Int_t iPWG4PtQAMC = 0; // Marta's QA tasks
113 Int_t iPWG4PtSpectra = 0; // Marta's QA tasks
114 Int_t iPWG4PtQATPC = 0; // Marta's QA tasks
115 Int_t iPWG4Cosmics = 0; // Marta's Cosmics Taks
116 Int_t iPWG4ThreeJets = 0; // Sona's thrust task
117 Int_t iPWG4QGSep = 0; // Sona's QG Separation task
118 Int_t iPWG4Minijet = 0; // Eva's Mini Jet Task cluster task
119 Int_t iPWG4KMeans = 0; // Andreas' KMeans task
120 Int_t iPWG4Cluster = 0; // CKB cluster task
121 Int_t iEMCUtilLibs = 0; // Flag to satisfy dependence on EMC utils
122 Int_t iPWG4PartCorrLibs = 0; // Gustavo's part corr analysis
123 Int_t iPWG4PartCorr = 0; // Gustavo's part corr analysis
124 Int_t iPWG4CaloQA = 0; // Gustavo's part corr analysis
125 Int_t iPWG4JetCorr = 0; // Paul's jet corr analysis
126 Int_t iPWG4Tagged = 0; // Gustavo's part corr analysis
127 Int_t iPWG4omega3pi = 0; // Omega to 3 pi analysis (PWG4)
128 Int_t iPWG4GammaConvLib = 0; // Gamma Conversio
129 Int_t iPWG4GammaConv = 0; // Gamma Conversio
130 Int_t iPWG4CaloConv = 0; // Gamma Conversio
131 Int_t kHighPtFilterMask = 32; // change depending on the used AOD Filter
132 TString kDeltaAODJetName = "AliAOD.Jets.root";
133 TString kDeltaAODJCORRANName = "AliAOD.JCORRAN.root";
134 TString kDeltaAODPartCorrName = "AliAOD.PartCorr.root";
135 TString kFastEmbeddingAOD = "emb/AliAOD.root";
136 TString kFastEmbAODList = "";
138 //==============================================================================
139 // ### PROOF Steering varibales
140 //==============================================================================
141 //== proof setup variables
142 TString kProofCluster = "alicecaf.cern.ch";
143 Bool_t kProofUseAFPAR = kFALSE; // use AF special par file
144 TString kProofAFversion = "AF-v4-17";
145 //== proof input and output variables
146 TString kProofDataSet = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
147 Bool_t kProofSaveToAlien = kFALSE; // save proof outputs in AliEn train_[trainName]_ddMonthyyyy_time.C
148 TString kProofOutdir = "";
149 Bool_t kProofClearPackages = kFALSE;
150 Int_t kProofEvents = 10000;
151 Int_t kProofOffset = 0;
152 //== proof process variables
155 //==============================================================================
156 // ### Grid plugin Steering varibiables
157 //==============================================================================
158 //== grid plugin setup variables
159 Bool_t kPluginUse = kTRUE; // do not change
160 Bool_t kPluginUseProductionMode = kFALSE; // use the plugin in production mode
161 TString kPluginRootVersion = "v5-27-06b"; // *CHANGE ME IF MORE RECENT IN GRID*
162 TString kPluginAliRootVersion = "v4-19-15-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
163 Bool_t kPluginMergeViaJDL = kTRUE; // merge via JDL
164 Bool_t kPluginFastReadOption = kFALSE; // use xrootd tweaks
165 Bool_t kPluginOverwriteMode = kTRUE; // overwrite existing collections
166 Int_t kPluginOutputToRunNumber = 1; // write the output to subdirs named after run number
167 // TString kPluginExecutableCommand = "root -b -q";
168 TString kPluginExecutableCommand = "source /Users/kleinb/setup_32bit_aliroot_trunk_clean_root_trunk.sh; alienroot -b -q ";
170 // == grid plugin input and output variables
171 TString kGridDatadir = "/alice/sim/PDC_08b/LHC09a1/AOD/";
172 Int_t kGridMaxRunsFromList = 999999999;
173 Int_t kGridOffsetRunFromList = 0; // skip the first n runs from the list
174 TString kGridLocalRunList = "";
175 TString kGridOutdir = ""; // AliEn output directory. If blank will become output_<kTrainName>
176 TString kGridDataSet = ""; // sub working directory not to confuse different run xmls
177 Int_t kGridRunRange[2] = {0, -1}; // Set the run range
178 TString kGridRunPattern = "%03d"; // important for leading zeroes!!
179 TString kGridPassPattern = "";
180 TString kGridExtraFiles = ""; // files that will be added to the input list in the JDL...
181 Int_t kGridMaxMergeFiles = 25; // Number of files merged in a chunk grid run range
182 TString kGridMergeExclude = "AliAOD.root"; // Files that should not be merged
183 TString kGridOutputStorages = "disk=2"; // Make replicas on the storages
184 // == grid process variables
185 Int_t kGridRunsPerMaster = 100; // Number of runs per master job
186 Int_t kGridFilesPerJob = 100; // Maximum number of files per job (gives size of AOD)
188 //==============================================================================
189 // ### Local Steering variables
190 //==============================================================================
191 //== local setup variables
192 //== local input and output variables
193 TString kLocalXMLDataset = ""; // Change local xml dataset for local interactive analysis
194 TString kLocalDataList = "local_deltaaod.txt"; // Change local xml dataset for local interactive analysis
195 // == local process variables
197 TString kPluginMode = "";
198 TString kAnalysisMode = "";
202 TString anaPars = "";
203 TString anaLibs = "";
204 TString anaLibsExtra = "";
205 TString anaSources = "";
206 // Function signatures
207 class AliAnalysisAlien;
209 //______________________________________________________________________________
210 void AnalysisTrainPWG4Jets(const char *analysis_mode="local",
211 const char *plugin_mode="",
212 const char *config_file="",Int_t iOffset = 0,Int_t iTotal = 0)
214 // Main analysis train macro. If a configuration file is provided, all parameters
215 // are taken from there but may be altered by CheckModuleFlags.
217 // these flag may be needed by the config file
218 kPluginMode = plugin_mode;
219 kAnalysisMode = analysis_mode;
221 if (strlen(config_file) && !LoadConfig(config_file)) return;
222 if(iTotal>0)kGridMaxRunsFromList = iTotal; // overwrites the settings from config file
223 if(iOffset)kGridOffsetRunFromList = iOffset;
224 if(iOffset)kProofOffset = iOffset;
227 TString smode(analysis_mode);
229 if (kSaveTrain)WriteConfig();
230 // Check compatibility of selected modules
231 CheckModuleFlags(smode);
232 // gROOT->ProcessLine(".trace");
234 printf("==================================================================\n");
235 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", kTrainName.Data(),smode.Data());
236 printf("==================================================================\n");
237 printf("= Configuring analysis train for: =\n");
238 if (iAODanalysis) printf("= AOD analysis =\n");
239 else printf("= ESD analysis =\n");
240 if (iPhysicsSelection) printf("= Physics selection =\n");
241 if(iCentralitySelection)printf("= Centrality selection =\n");
242 if (useTender) printf("= Using tender =\n");
243 if (iESDfilter) printf("= ESD filter =\n");
244 if (iJETAN) printf("= Jet analysis =\n");
245 printf("==================================================================\n");
247 char *printMask = ":: %20s %10d\n";
248 printf(printMask,"Fill AOD",(UInt_t)kFillAOD);
249 printf(printMask,"Save AOD", (UInt_t)kSaveAOD);
250 printf(printMask,"MC truth", (UInt_t)kUseMC);
251 printf(printMask,"KINE filter", (UInt_t)kUseKinefilter);
252 printf(printMask,"track refs", (UInt_t)kUseTR);
253 printf(printMask,"tags", (UInt_t)kUseESDTags);
254 printf(printMask,"AOD tags", (UInt_t)kUseAODTags);
255 printf(printMask,"debugging", (UInt_t)kUseDebug);
256 printf(printMask,"PAR files", (UInt_t)kUsePAR);
257 printf(printMask,"AliEn plugin", (UInt_t)kPluginUse);
258 printf(printMask,"JETAN subtract", (UInt_t)iJETSUBTRACT);
259 printf(printMask,"PWG1 QA sym", iPWG1QASym);
260 printf(printMask,"PWG4 Source Sara",iPWG4TmpSourceSara);
261 printf(printMask,"PWG4 Fragmentation",iPWG4Fragmentation);
262 printf(printMask,"PWG4 Jet Chem",iPWG4JetChem);
263 printf(printMask,"PWG4 Jet tasks",iPWG4JetTasks);
264 printf(printMask,"PWG4 Jet Services",iPWG4JetServices);
265 printf(printMask,"PWG4 Jet Spectrum",iPWG4JetSpectrum);
266 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
267 printf(printMask,"PWG4 UE",iPWG4UE);
268 printf(printMask,"PWG4 Leading UE",iPWG4LeadingUE);
269 printf(printMask,"PWG4 Corrections UE",iPWG4CorrectionsUE);
270 printf(printMask,"PWG4 Pt QA MC",iPWG4PtQAMC);
271 printf(printMask,"PWG4 Pt Spectra",iPWG4PtSpectra);
272 printf(printMask,"PWG4 Pt QA TPC",iPWG4PtQATPC);
273 printf(printMask,"PWG4 Cosmics",iPWG4Cosmics);
274 printf(printMask,"PWG4 Three Jets",iPWG4ThreeJets);
275 printf(printMask,"PWG4 QGSep",iPWG4QGSep);
276 printf(printMask,"PWG4 Minijet",iPWG4Minijet);
277 printf(printMask,"PWG4 KMeans",iPWG4KMeans);
278 printf(printMask,"PWG4 Cluster",iPWG4Cluster);
279 printf(printMask,"PWG4 Part Corr",iPWG4PartCorr);
280 printf(printMask,"PWG4 Calo QA",iPWG4CaloQA);
281 printf(printMask,"PWG4 Jet Corr",iPWG4JetCorr);
282 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
283 printf(printMask,"PWG4 Tagged",iPWG4Tagged);
284 printf(printMask,"PWG4 omega to 3 pi ",iPWG4omega3pi);
285 printf(printMask,"PWG4 Gamma Conv",iPWG4GammaConv);
286 printf(printMask,"PWG4 Calo Conv",iPWG4CaloConv);
287 printf(printMask,"HighPt FilterMask",kHighPtFilterMask);
289 //==========================================================================
290 // Connect to back-end system
291 if (!Connect(smode)) {
292 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
296 // Load common libraries and set include path
297 if (!LoadCommonLibraries(smode)) {
298 ::Error("AnalysisTrain", "Could not load common libraries");
304 // Make the analysis manager and connect event handlers
305 AliAnalysisManager *mgr = new AliAnalysisManager("PWG4Train", "pwg4 mini train");
306 if (kCommonOutputFileName.Length()>0)mgr->SetCommonFileName(kCommonOutputFileName.Data());
307 if (kProofSaveToAlien) mgr->SetSpecialOutputLocation(kProofOutdir);
309 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
310 if (kUseSysInfo)mgr->SetNSysInfo(kUseSysInfo);
311 mgr->SetSkipTerminate(kSkipTerminate);
313 // Load analysis specific libraries
314 if (!LoadAnalysisLibraries(smode)) {
315 ::Error("AnalysisTrain", "Could not load analysis libraries");
319 // Create input handler (input container created automatically)
322 AliAODInputHandler *aodH = new AliAODInputHandler();
323 mgr->SetInputEventHandler(aodH);
324 // if (iPWG4JetTasks) aodH->AddFriend(Form("deltas/%s",kDeltaAODJetName.Data()));
325 // if (iPWG4PartCorr) aodH->AddFriend(Form("deltas/%s"kDeltaAODJetName.Data()));
328 AliESDInputHandler *esdHandler = new AliESDInputHandler();
329 if (kUseESDTags) esdHandler->SetReadTags();
330 esdHandler->SetReadFriends(kFALSE);
331 mgr->SetInputEventHandler(esdHandler);
332 // if(iPWG4PtQATPC&& !kTrainName.Contains("pass5"))esdHandler->SetActiveBranches("ESDfriend");
336 // Monte Carlo handler
337 if (kUseMC && !iAODanalysis) {
338 AliMCEventHandler* mcHandler = new AliMCEventHandler();
339 mgr->SetMCtruthEventHandler(mcHandler);
340 mcHandler->SetReadTR(kUseTR);
342 // AOD output container, created automatically when setting an AOD handler
344 // AOD output handler
345 AliAODHandler* aodHandler = new AliAODHandler();
346 aodHandler->SetOutputFileName("AliAOD.root");
347 aodHandler->SetFillAODforRun(kFillAOD);
349 mgr->SetOutputEventHandler(aodHandler);
350 AliAnalysisDataContainer * cout_aod = mgr->GetCommonOutputContainer();
351 cout_aod->SetSpecialOutput();
353 // Debugging if needed
356 mgr->SetDebugLevel(3);
359 mgr->RegisterExtraFile("syswatch.root");
360 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
361 kGridMergeExclude += "syswatch.root";
364 AliLog::SetGlobalLogLevel(AliLog::kError);
368 //==========================================================================
369 // Create the chain. In this example it is created only from ALIEN files but
370 // can be done to work in batch or grid mode as well.
371 TChain *chain = CreateChain(smode, plugin_mode);
373 //==========================================================================
374 // Load the tasks configuration macros for all wagons. These files are supposed now to be
375 // in the current workdir, but in AliEn they will be in the file catalog,
376 // mapped from AliRoot and pecified in the jdl input list.
378 // For now connection to top input container and common AOD output container
379 // is done in this macro, but in future these containers will be connected
380 // from each task configuration macro.
383 // Tender and supplies. Needs to be called for every event.
387 gROOT->LoadMacro("$ALICE_ROOT_SRC/ANALYSIS/TenderSupplies/AddTaskTender.C");
388 AliAnalysisTaskSE *tender = AddTaskTender(kTRUE);
389 // tender->SelectCollisionCandidates();
390 tender->SetDebugLevel(2);
395 if(iPhysicsSelection && !iAODanalysis){
396 gROOT->LoadMacro("$ALICE_ROOT_SRC/ANALYSIS/macros/AddTaskPhysicsSelection.C");
397 Int_t iTriggerHIC = 0;
398 Bool_t rejectBkg = true;
401 rejectBkg = false; // for the moment...
403 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kIsMC,rejectBkg);
404 iPhysicsSelectionFlag = AliVEvent::kMB;
405 mgr->RegisterExtraFile("EventStat_temp.root");
406 mgr->AddStatisticsTask();
409 if(iCentralitySelection){
411 // has to run before AOD filter
412 gROOT->LoadMacro("$ALICE_ROOT_SRC/ANALYSIS/macros/AddTaskCentrality.C");
413 // const char* file1="$ALICE_ROOT/ANALYSIS/macros/AliCentralityBy1D_137161.root";
414 // const char* file2="$ALICE_ROOT/ANALYSIS/macros/AliCentralityByFunction_137161.root";
415 AliCentralitySelectionTask *taskC = AddTaskCentrality();
416 if (!taskC) ::Warning("AnalysisTrainPWG4Jets", "AliCentralitySelectionTask cannot run for this train conditions - EXCLUDED");
419 if (iESDfilter && !iAODanalysis) {
420 // ESD filter task configuration.
421 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskESDFilterPWG4Train.C");
422 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilter(kUseKinefilter,kUseMuonfilter);
423 taskesdfilter->SetEnableFillAOD(!kFilterAOD);
426 mgr->RegisterExtraFile("pyxsec_hists.root");
427 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
428 kGridMergeExclude += "pyxsec_hists.root";
435 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
436 mgr->AddTask(tagTask);
437 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
438 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
439 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
440 mgr->ConnectOutput(tagTask, 1, coutTags);
443 if (iPWG4FastEmbedding) {
444 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskFastEmbedding.C");
445 AliAnalysisTaskFastEmbedding *taskEmbedding = 0;
446 if(kFastEmbAODList.Length()) taskEmbedding = AddTaskFastEmbedding(kFastEmbAODList, 1);
447 else taskEmbedding = AddTaskFastEmbedding(kFastEmbeddingAOD, 0);
448 taskEmbedding->SetJetBranch("jetsAOD_UA104_B0_Filter00256_Cut01000");
449 // taskEmbedding->SetEvtSelecMode(AliAnalysisTaskFastEmbedding::kEventsAll);
450 // taskEmbedding->SetDebugLevel(10);
455 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskJets.C");
456 AliAnalysisTaskJets *taskjets = 0;
459 taskjets = AddTaskJets(kHighPtFilterMask);
460 taskjets->SetName("StandardJets");
461 taskjets->SetNonStdBranch("");
465 // Set only few jet finders backgroudn subtraction w an wo
467 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
468 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
470 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
472 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
473 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
479 taskjets = AddTaskJets("AOD","SISCONE",0.4,kHighPtFilterMask,0.15,0); //no background subtraction to be done later....
480 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
481 cTmp = taskjets->GetNonStdBranch();
482 if(cTmp.Length()>0)kJetSubtractBranches += Form("%s ",cTmp.Data());
485 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
487 taskjets = AddTaskJets("AODMC","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
488 taskjets = AddTaskJets("AODMC2","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
491 taskjets = AddTaskJets("AODMC","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
492 taskjets = AddTaskJets("AODMC2","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
495 if(kDeltaAODJetName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJetName.Data());
497 if (!taskjets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
501 if (iPWG4FastEmbedding && iJETAN) {
502 AliAnalysisTaskJets *taskEmbJets = AddTaskJets("AODextra", "FASTJET", 0.4, kHighPtFilterMask);
503 taskEmbJets->ReadAODFromOutput();
504 kJetSubtractBranches_extra += Form("%s ", taskEmbJets->GetNonStdBranch());
506 taskEmbJets = AddTaskJets("AODextraonly", "FASTJET", 0.4, kHighPtFilterMask);
507 taskEmbJets->ReadAODFromOutput();
509 taskEmbJets = AddTaskJets("AODextra", "UA1", 0.4, kHighPtFilterMask,1.,0);
510 taskEmbJets->ReadAODFromOutput();
511 taskEmbJets = AddTaskJets("AODextraonly", "UA1", 0.4, kHighPtFilterMask,1.,0);
512 taskEmbJets->ReadAODFromOutput();
513 taskEmbJets = AddTaskJets("AODextra", "UA1", 0.4, kHighPtFilterMask,1.,2);
514 taskEmbJets->ReadAODFromOutput();
518 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskJetCluster.C");
519 AliAnalysisTaskJetCluster *taskCl = 0;
529 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
530 taskCl->SetBackgroundCalc(kTRUE);
531 taskCl->SetCentralityCut(fCenLo,fCenUp);
532 taskCl->SetGhostEtamax(0.9);
533 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
535 if (iPWG4FastEmbedding) {
536 AliAnalysisTaskJetCluster *taskClEmb = 0;
537 taskClEmb = AddTaskJetCluster("AODextra","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
538 taskClEmb->SetBackgroundCalc(kTRUE);
539 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
540 taskClEmb->SetGhostEtamax(0.9);
541 kDefaultJetBackgroundBranch_extra = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskClEmb->GetJetOutputBranch());
543 taskClEmb = AddTaskJetCluster("AODextraonly","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
544 taskClEmb->SetBackgroundCalc(kFALSE);
545 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
546 taskClEmb->SetGhostEtamax(0.9);
548 taskClEmb = AddTaskJetCluster("AODextra","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15);
549 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
550 taskClEmb->SetBackgroundBranch(kDefaultJetBackgroundBranch_extra.Data());
551 kJetSubtractBranches_extra += Form("%s ",taskClEmb->GetJetOutputBranch());
553 taskClEmb = AddTaskJetCluster("AODextraonly","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15);
554 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
557 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.2,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
558 taskCl->SetBackgroundCalc(kTRUE);
559 taskCl->SetCentralityCut(fCenLo,fCenUp);
560 taskCl->SetGhostEtamax(0.9);
563 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1,kDeltaAODJetName.Data(),0.15); // this one is for the background jets
564 taskCl->SetBackgroundCalc(kTRUE);
565 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
566 taskCl->SetGhostEtamax(0.9);
568 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1,kDeltaAODJetName.Data(),0.15);
569 taskCl->SetBackgroundCalc(kTRUE);
570 taskCl->SetGhostEtamax(0.9);
573 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15);
574 taskCl->SetCentralityCut(fCenLo,fCenUp);
575 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
576 taskCl->SetNRandomCones(10);
577 taskCl->SetNSkipLeadingRan(2);
578 kDefaultJetBranch = taskCl->GetJetOutputBranch();
579 if(kDeltaAODJetName.Length()==0&&kFilterAOD){
580 if(kIsPbPb)taskCl->SetJetTriggerPtCut(40.);
581 else taskCl->SetJetTriggerPtCut(20.);
584 kJetSubtractBranches += Form("%s ",taskCl->GetJetOutputBranch());
586 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.2,0,1,kDeltaAODJetName.Data(),0.15);
587 taskCl->SetCentralityCut(fCenLo,fCenUp);
588 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
589 kJetSubtractBranches += Form("%s ",taskCl->GetJetOutputBranch());
593 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
594 taskCl->SetBackgroundCalc(kTRUE);
595 taskCl->SetGhostEtamax(0.9);
596 kDefaultJetBackgroundBranchMC = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
598 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
599 taskCl->SetBackgroundCalc(kTRUE);
600 taskCl->SetGhostEtamax(0.9);
601 kDefaultJetBackgroundBranchMC2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
604 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
605 taskCl->SetBackgroundCalc(kTRUE);
606 taskCl->SetGhostEtamax(0.9);
607 kDefaultJetBackgroundBranchMC = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
609 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
610 taskCl->SetBackgroundCalc(kTRUE);
611 taskCl->SetGhostEtamax(0.9);
612 kDefaultJetBackgroundBranchMC2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
613 // pp background calcs...
616 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
617 taskCl->SetGhostEtamax(0.9);
618 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC.Data());
619 kDefaultJetBranchMC = taskCl->GetJetOutputBranch();
621 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
622 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC2.Data());
623 kDefaultJetBranchMC2 = taskCl->GetJetOutputBranch();
628 if (!taskCl) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCluster cannot run for this train conditions - EXCLUDED");
633 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskJetBackgroundSubtract.C");
634 AliAnalysisTaskJetBackgroundSubtract *taskSubtract = 0;
635 if(kJetSubtractBranches.Length()){
637 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches,3,kJetSubtractMask1.Data(),kJetSubtractMask2.Data());
638 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
639 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
641 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches,2,kJetSubtractMask1.Data(),kJetSubtractMask2.Data());
642 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data()); taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
643 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
645 // taskSubtract->SetDebugLevel(3);
647 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches,1,kJetSubtractMask1.Data(),kJetSubtractMask2.Data());
648 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data()); taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
649 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
651 if(kJetSubtractBranches.Contains(kDefaultJetBranch.Data())&&kIsPbPb){
652 kDefaultJetBranch.ReplaceAll(taskSubtract->GetToReplace(),Form(taskSubtract->GetReplacementMask(),taskSubtract->GetSubtractionMethod()));
655 if(kJetSubtractBranches_extra.Length()){
656 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches_extra,1,kJetSubtractMask1.Data(),kJetSubtractMask2.Data(),"extra");
657 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch_extra.Data());
658 taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
659 //taskSubtract->SetDebugLevel(3);
660 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
661 if(kJetSubtractBranches_extra.Contains(kDefaultJetBranch.Data())){
662 kDefaultJetBranch.ReplaceAll(taskSubtract->GetToReplace(),Form(taskSubtract->GetReplacementMask(),taskSubtract->GetSubtractionMethod()));
665 if (!taskSubtract) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetBackgroundSubtrac cannot run for this train conditions - EXCLUDED");
669 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskDiJets.C");
670 AliAnalysisTaskDiJets *taskdijets = 0;
671 if(iDIJETAN&1)taskdijets = AddTaskDiJets();
672 if (!taskdijets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
674 taskdijets = AddTaskDiJets("jetsAOD_CDF07");
675 taskdijets = AddTaskDiJets("jetsAOD_DA07");
676 taskdijets = AddTaskDiJets("jetsAOD_FASTJET07");
677 taskdijets = AddTaskDiJets("jetsAOD_FASTKT07");
678 taskdijets = AddTaskDiJets("jetsAOD_SISCONE07");
679 taskdijets = AddTaskDiJets("jetsAOD_UA107");
684 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG1/PilotTrain/AddTaskQAsym.C");
685 AliAnalysisTaskQASym *taskQASym = AddTaskQAsym(-1);
686 if (!taskQASym) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQASym cannot run for this train conditions - EXCLUDED");
691 if(iPWG4TmpSourceSara){
692 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskEta.C");
693 AliAnalysisTaskEta *taskEta = AddTaskEta();
694 if (!taskEta) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskEta cannot run for this train conditions - EXCLUDED");
698 if(iPWG4JetServices){
699 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskJetServices.C");
700 AliAnalysisTaskJetServices *taskjetServ = 0;
701 taskjetServ = AddTaskJetServices();
702 if (!taskjetServ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetServices cannot run for this train conditions - EXCLUDED");
703 if(kGridRunRange[0]>0)taskjetServ->SetRunRange(kGridRunRange[0],kGridRunRange[1]);
704 else taskjetServ->SetRunRange(110000,160000);
705 taskjetServ->SetMCData(kIsMC);
706 taskjetServ->SetUsePhysicsSelection((Bool_t)iPhysicsSelection);
707 taskjetServ->SetPhysicsSelectionFlag(iPhysicsSelectionFlag); //
708 taskjetServ->SetNonStdFile(kDeltaAODJetName.Data());
710 if(kDeltaAODJetName.Length()>0&&kFilterAOD)taskjetServ->SetFilterAODCollisions(kTRUE);
711 // else if(iAODanalysis)taskjetServ->SetFilterAODCollisions(kTRUE);
713 taskjetServ->SetZVertexCut(8.);
716 // taskjetServ->SetDebugLevel(3);
717 taskjetServ->SetAODInput(kTRUE);
721 if(iPWG4JetSpectrum){
722 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskJetSpectrum2.C");
723 AliAnalysisTaskJetSpectrum2 *taskjetSpectrum = 0;
724 if(iPWG4JetSpectrum&1){
726 for(int i = 0;i<5;i++){
727 TString tmp(kDefaultJetBranch.Data());
728 // tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),1),kJetSubtractMask1.Data());
729 // tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),1),kJetSubtractMask1.Data());
730 tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),1),Form(kJetSubtractMask1.Data(),0));
731 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),tmp.Data(),"",kHighPtFilterMask,AliVEvent::kMB,0,kFALSE,0,i);
732 // taskjetSpectrum->SetDebugLevel(3);
733 // taskjetSpectrum->SetMinJetPt(10);
734 taskjetSpectrum->SetTrackEtaWindow(0.8);
735 taskjetSpectrum->SetJetEtaWindow(0.4);
736 if(iAODanalysis)SetAODInput(taskjetSpectrum);
739 // check the old subtracted vs. the new subtracted
740 TString tmp2(kDefaultJetBranch.Data());
741 tmp2.ReplaceAll(Form(kJetSubtractMask2.Data(),1),Form(kJetSubtractMask2.Data(),2));
742 taskjetSpectrum = AddTaskJetSpectrum2(tmp2.Data(),kDefaultJetBranch.Data(),"",kHighPtFilterMask,AliVEvent::kMB,0,kFALSE,0,i);
743 // taskjetSpectrum->SetDebugLevel(3);
744 // taskjetSpectrum->SetMinJetPt(10);
745 taskjetSpectrum->SetTrackEtaWindow(0.8);
746 taskjetSpectrum->SetJetEtaWindow(0.4);
747 if(iAODanalysis)SetAODInput(taskjetSpectrum);
749 // check the old subtracted vs. the new subtracted
750 TString tmp3(kDefaultJetBranch.Data());
751 tmp3.ReplaceAll(Form(kJetSubtractMask2.Data(),1),Form(kJetSubtractMask2.Data(),3));
753 taskjetSpectrum = AddTaskJetSpectrum2(tmp3.Data(),kDefaultJetBranch.Data(),"",kHighPtFilterMask,AliVEvent::kMB,0,kFALSE,0,i);
754 // taskjetSpectrum->SetDebugLevel(3);
755 // taskjetSpectrum->SetMinJetPt(10);
756 taskjetSpectrum->SetTrackEtaWindow(0.8);
757 taskjetSpectrum->SetJetEtaWindow(0.4);
758 if(iAODanalysis)SetAODInput(taskjetSpectrum);
761 taskjetSpectrum = AddTaskJetSpectrum2(Form("jetsAOD_UA104_B2_Filter%05d_Cut01000",kHighPtFilterMask),kDefaultJetBranch.Data(),"",kHighPtFilterMask,AliVEvent::kMB,0,kFALSE,0,i);
762 // taskjetSpectrum->SetDebugLevel(3);
763 // taskjetSpectrum->SetMinJetPt(10);
764 taskjetSpectrum->SetTrackEtaWindow(0.8);
765 taskjetSpectrum->SetJetEtaWindow(0.4);
766 if(iAODanalysis)SetAODInput(taskjetSpectrum);
772 TString tmp(kDefaultJetBranch.Data());
773 // tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),1),kJetSubtractMask1.Data());
774 // tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),1),kJetSubtractMask1.Data());
775 tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),0),Form(kJetSubtractMask1.Data(),1));
776 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),tmp.Data(),"",kHighPtFilterMask,AliVEvent::kMB,0,kFALSE,0,i);
777 taskjetSpectrum->SetDebugLevel(3);
778 // taskjetSpectrum->SetMinJetPt(10);
779 taskjetSpectrum->SetTrackEtaWindow(0.8);
780 taskjetSpectrum->SetJetEtaWindow(0.4);
781 if(iAODanalysis)SetAODInput(taskjetSpectrum);
784 TString tmp2(kDefaultJetBranch.Data());
785 tmp2.ReplaceAll(Form(kJetSubtractMask2.Data(),0),Form(kJetSubtractMask2.Data(),2));
786 taskjetSpectrum = AddTaskJetSpectrum2(tmp2.Data(),kDefaultJetBranch.Data(),"",kHighPtFilterMask,AliVEvent::kMB,0,kFALSE,0,i);
787 // taskjetSpectrum->SetDebugLevel(3);
788 // taskjetSpectrum->SetMinJetPt(10);
789 taskjetSpectrum->SetTrackEtaWindow(0.8);
790 taskjetSpectrum->SetJetEtaWindow(0.4);
792 // check the old subtracted vs. the new subtracted
793 TString tmp3(kDefaultJetBranch.Data());
794 tmp3.ReplaceAll(Form(kJetSubtractMask2.Data(),0),Form(kJetSubtractMask2.Data(),3));
795 taskjetSpectrum = AddTaskJetSpectrum2(tmp3.Data(),kDefaultJetBranch.Data(),"",kHighPtFilterMask,AliVEvent::kMB,0,kFALSE,0,i);
796 // taskjetSpectrum->SetDebugLevel(3);
797 // taskjetSpectrum->SetMinJetPt(10);
798 taskjetSpectrum->SetTrackEtaWindow(0.8);
799 taskjetSpectrum->SetJetEtaWindow(0.4);
800 if(iAODanalysis)SetAODInput(taskjetSpectrum);
802 if (!taskjetSpectrum) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetSpectrum2 cannot run for this train conditions - EXCLUDED");
806 if(iPWG4Fragmentation){
807 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskFragmentationFunction.C");
808 AliAnalysisTaskFragmentationFunction *taskFrag = 0;
813 taskFrag = AddTaskFragmentationFunction(kDefaultJetBranch.Data(),"","","",kHighPtFilterMask);
815 if (!taskFrag) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskFragmentationFunction cannot run for this train conditions - EXCLUDED");
819 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskJetChem.C");
820 AliAnalysisTask *taskChem = AddTaskJetChem(kHighPtFilterMask);
821 if (!taskChem) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetChem cannot run for this train conditions - EXCLUDED");
824 if (iPWG4JetResponse) {
825 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskJetResponse.C");
826 AliAnalysisTask *taskJetResponse = 0;
829 taskJetResponse = AddTaskJetResponse("jets", "FASTJET", 0.4, kHighPtFilterMask, 0.15, 0);
830 taskJetResponse = AddTaskJetResponse("jets", "FASTJET", 0.4, kHighPtFilterMask, 0.15, 1);
832 taskJetResponse = AddTaskJetResponse("jets", "UA1", 0.4, kHighPtFilterMask, 1., 0);
833 taskJetResponse = AddTaskJetResponse("jets", "UA1", 0.4, kHighPtFilterMask, 1., 2);
836 taskJetResponse = AddTaskJetResponse("clusters", "ANTIKT", 0.4, kHighPtFilterMask, 0.15, 0);
837 taskJetResponse = AddTaskJetResponse("clusters", "ANTIKT", 0.4, kHighPtFilterMask, 0.15, 1);
839 if (!taskJetResponse) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetResponse cannot run for this train conditions - EXCLUDED");
844 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskJCORRANTask.C");
845 AliJCORRANTask* corran = AddTaskJCORRAN(kDeltaAODJCORRANName.Data(),0);
846 if(!corran)::Warning("AnalysisTrainPWG4Jets", "AliJCORRANTask cannot run for this train conditions - EXCLUDED");
848 if(kDeltaAODJCORRANName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJCORRANName.Data());
853 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskUE.C");
854 AliAnalysisTaskUE *taskUE = 0;
855 if(iPWG4UE&1)taskUE = AddTaskUE();
857 taskUE =AddTaskUE("jetsAOD_CDF04","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
858 // taskUE =AddTaskUE("jetsAOD_CDF07","CDF", "LJ", "TRANSV","MSP");
859 taskUE =AddTaskUE("jetsAOD_SISCONE04","CDF", "LJ", "TRANSV","MSP");
860 // taskUE =AddTaskUE("jetsAOD_SISCONE07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
861 taskUE =AddTaskUE("jetsAOD_ICDF","CDF","LJ","TRANSV","MSP");
862 taskUE =AddTaskUE("jetsAOD_FASTKT04","CDF", "LJ", "TRANSV","MSP");
863 // taskUE =AddTaskUE("jetsAOD_FASTKT07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
864 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta05", "TRANSV","MSP");
865 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta09", "TRANSV","MSP");
868 if (!taskUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskUE cannot run for this train conditions - EXCLUDED");
872 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskLeadingTrackUE.C");
873 AliAnalysisTaskLeadingTrackUE *taskLeadingUE = AddTaskLeadingTrackUE(kUseMC);
874 if (!taskLeadingUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTasLeadingTrackkUE cannot run for this train conditions - EXCLUDED");
875 // taskLeadingUE->SetFilterBit(64);
879 if(iPWG4CorrectionsUE){
880 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskCorrectionsUE.C");
881 AliAnalysisTaskCorrectionsUE *taskCorrectionsUE = 0;
882 if(iPWG4CorrectionsUE&1)taskCorrectionsUE = AddTaskCorrectionsUE("jetsAOD_NONE","CDF","MP_eta05","TRANSV","MSP",kFALSE);
883 if (!taskCorrectionsUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCorrectionsUE cannot run for this train conditions - EXCLUDED");
887 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskThreeJets.C");
888 AliAnalysisTaskThreeJets *taskThree = AddTaskThreeJets();
889 if(!taskThree)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskThreets cannot run for this train conditions - EXCLUDED");
892 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskQGSep.C");
893 AliAnalysisTaskQGSep *taskQGSep = AddTaskQGSep(kUseMC,iAODanalysis);
894 if(!taskQGSep)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQGSep cannot run for this train conditions - EXCLUDED");
899 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskMinijet.C");
900 AliAnalysisTaskMinijet *taskMini = AddTaskMinijet(-1,"esd",kUseMC,kGridDataSet);
901 // if we ha highmult trigger add another task
902 if(!taskMini)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskMinjet cannot run for this train conditions - EXCLUDED");
907 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskPWG4HighPtQAMC.C");
908 AliPWG4HighPtQAMC *taskQAMC = 0;
911 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),0);
912 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),1);
913 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),2);
916 if (!taskQAMC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQAMC cannot run for this train conditions - EXCLUDED");
920 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskPWG4HighPtQATPConly.C");
921 AliPWG4HighPtQATPConly *taskQATPC = 0;
922 if(iPWG4PtQATPC&1)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),1);
923 if(iPWG4PtQATPC&2)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),2);
925 if (!taskQATPC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQATPC cannot run for this train conditions - EXCLUDED");
929 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskPWG4CosmicCandidates.C");
931 AliPWG4CosmicCandidates *taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(0);
932 taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(1);
934 if (!taskPWG4CosmicCandidates) ::Warning("AnalysisTrainPWG4Jets", "AddTaskPWG4CosmicCandidates cannot run for this train conditions - EXCLUDED");
939 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskPWG4HighPtSpectra.C");
940 AliPWG4HighPtSpectra *taskPtSpectra = AddTaskPWG4HighPtSpectra(kGridDataSet.Data());
941 if (!taskPtSpectra) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskPtSpectra cannot run for this train conditions - EXCLUDED");
944 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskKMeans.C");
945 AliAnalysisTaskKMeans *taskKMeans = AddTaskKMeans();
946 if (!taskKMeans) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskKMenans cannot run for this train conditions - EXCLUDED");
950 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskPartCorr.C");
951 AliAnalysisTaskParticleCorrelation *taskpartcorrPHOS = AddTaskPartCorr("AOD", "PHOS",kFALSE,kIsMC);
952 if (!taskpartcorrPHOS) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation PHOS cannot run for this train conditions - EXCLUDED");
953 AliAnalysisTaskParticleCorrelation *taskpartcorrEMCAL = AddTaskPartCorr("AOD", "EMCAL",kFALSE,kIsMC);
954 if (!taskpartcorrEMCAL) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation EMCAL cannot run for this train conditions - EXCLUDED");
955 if(kDeltaAODPartCorrName.Length()>0)mgr->RegisterExtraFile(kDeltaAODPartCorrName.Data());
959 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/QA/AddTaskCalorimeterQA.C");
960 AliAnalysisTaskParticleCorrelation *taskcaloQA = AddTaskCalorimeterQA("ESD",kFALSE,kIsMC,kCaloQAOutputFileName.Data());
961 if(!taskcaloQA)::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation QA cannot run - EXCLUDED");
962 // if(kCaloQAOutputFileName.Length()>0)mgr->RegisterExtraFile(kCaloQAOutputFileName.Data());
966 // using namespace JetCorrelHD;
967 TString cdir = gSystem->WorkingDirectory();
968 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT_SRC/PWG4/macros/"));
969 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskJetCorrel.C");
970 AliAnalysisTaskJetCorrel *taskjetcorr = AddTaskJetCorrel();
971 gSystem->ChangeDirectory(cdir);
972 if (!taskjetcorr) ::Warning("AnalysisTrainNew", "AliAnalysisTaskJetCorrel cannot run for this train conditions - EXCLUDED");
976 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskTaggedPhotons.C");
977 AliAnalysisTaskTaggedPhotons * taskTagged = AddTaskTaggedPhotons(kFALSE); // EMCAL
978 taskTagged = AddTaskTaggedPhotons(kTRUE); // PHOS
979 if (!taskTagged) ::Warning("AnalysisTrainNew", "AliAnalysisTaskTaggedPhotons cannot run for this train conditions - EXCLUDED");
982 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskomega3pi.C");
983 AliAnalysisTaskOmegaPi0PiPi *taskomega3pi = AddTaskomega3pi();
984 if (!taskomega3pi) ::Warning("AnalysisTrainNew", "AliAnalysisTaskomega3pi cannot run\
985 for these train conditions - EXCLUDED");
988 // PWG4 gamma conversion analysis
989 if (iPWG4GammaConv) {
990 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskGammaConversion.C");
991 TString cdir = gSystem->WorkingDirectory();
992 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT_SRC/PWG4/macros/"));
993 // TString gcArguments = "-run-on-train -run-jet -run-chic -run-neutralmeson -run-cf";
994 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
995 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
996 TString gcArguments = "-run-on-train -run-jet -run-omega-meson -use-own-xyz -run-neutralmeson -no-aod";
997 // TString kGCAnalysisCutSelectionId="9003562000100310";
998 // TString kGCAnalysisCutSelectionId="9003562000100312";
999 // gcArguments.Append(Form(" -set-cut-selection %s ",kGCAnalysisCutSelectionId.Data()));
1000 if(!kIsMC)gcArguments += " -mc-off";
1001 AliAnalysisTaskGammaConversion * taskGammaConversion = AddTaskGammaConversion(gcArguments,mgr->GetCommonInputContainer());
1002 gSystem->ChangeDirectory(cdir);
1003 taskGammaConversion->SelectCollisionCandidates();
1004 if (!taskGammaConversion) ::Warning("AnalysisTrainNew", "AliAnalysisTaskGammaConversion cannot run for these train conditions - EXCLUDED");
1007 if (iPWG4CaloConv) {
1008 gROOT->LoadMacro("$ALICE_ROOT_SRC/PWG4/macros/AddTaskCaloConv.C");
1009 AliAnalysisTaskCaloConv * taskCaloConv = AddTaskCaloConv();
1010 if (!taskCaloConv) ::Warning("AnalysisTrainNew", "AliAnalysisTaskCaloConv cannot run for these train conditions - EXCLUDED");
1015 //==========================================================================
1016 // FOR THE REST OF THE TASKS THE MACRO AddTaskXXX() is not yet implemented/
1020 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1021 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1024 if (mgr->InitAnalysis()) {
1026 // if (kSaveTrain || strlen(config_file)) gSystem->ChangeDirectory(kTrainName);
1027 if (!strcmp(plugin_mode,"submit")&&smode=="GRID"){
1028 TString alien_workdir = gGrid->GetHomeDirectory();
1029 if (iAODanalysis) alien_workdir += "analysisAOD";
1030 else alien_workdir += "analysisESD";
1031 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1032 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1033 printf("=== AnalysisTrainPWG4Jets:: Registering jdl in the work directory alien://%s/%s, should be done by the manager! ===\n",
1034 alien_workdir.Data(),gridhandler->GetGridOutputDir());
1037 dest = Form("%s/%s/%s.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1038 if(AliAnalysisAlien::FileExists(dest.Data())){
1039 Printf("%s exist on grid removing...",dest.Data());
1040 gGrid->Rm(dest.Data());
1042 Printf("%s copy ...",dest.Data());
1043 TFile::Cp(Form("file:%s.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
1047 dest = Form("%s/%s/%s_merge.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1048 if(AliAnalysisAlien::FileExists(dest.Data())){
1049 Printf("%s exist on grid removing...",dest.Data());
1050 gGrid->Rm(dest.Data());
1052 Printf("%s copy ...",dest.Data());
1053 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
1055 dest = Form("%s/%s/%s_merge_final.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1056 if(AliAnalysisAlien::FileExists(dest.Data())){
1057 Printf("%s exist on grid removing...",dest.Data());
1058 gGrid->Rm(dest.Data());
1060 Printf("%s copy ...",dest.Data());
1061 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
1065 dest = Form("%s/rootfiles/STEER/LQ1dRef_v1.root",gGrid->GetHomeDirectory());
1066 if(AliAnalysisAlien::FileExists(dest.Data())){
1067 Printf("%s exist on grid removing...",dest.Data());
1068 gGrid->Rm(dest.Data());
1070 TFile::Cp(Form("file:%s/STEER/LQ1dRef_v1.root",
1071 gSystem->ExpandPathName("$ALICE_ROOT")),Form("alien://%s",dest.Data()));
1074 AliLog::SetGlobalLogLevel(AliLog::kError);
1075 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
1076 TFile * fM = TFile::Open("manager_local.root","RECREATE");
1081 // grmpf, aliroot error handler overwrites root
1082 gErrorIgnoreLevel = kErrorIgnoreLevel;
1083 if(gErrorIgnoreLevel>3000) AliLog::SetGlobalLogLevel(AliLog::kFatal);
1084 StartAnalysis(smode, chain);
1085 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
1086 for(int i = 0;i < mgr->GetTopTasks()->GetEntries();i++){
1087 mgr->ProfileTask(i);
1090 if (!strcmp(plugin_mode, "offline")&&smode=="GRID"){
1091 // Offline mode path files
1093 // PatchAnalysisMacro();
1096 if (kSaveTrain && smode=="GRID") {
1097 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1098 TString alien_workdir = gGrid->GetHomeDirectory();
1099 if (iAODanalysis) alien_workdir += "analysisAOD";
1100 else alien_workdir += "analysisESD";
1101 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1102 // kGridOutdir = gridhandler->GetGridOutputDir();
1103 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
1104 alien_workdir.Data());
1105 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data())))
1106 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
1107 if (strcmp(plugin_mode, "test"))
1108 TFile::Cp(Form("file:%sConfig.C",kTrainName.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
1113 //______________________________________________________________________________
1114 void StartAnalysis(const char *mode, TChain *chain) {
1117 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1118 if (!strcmp(mode, "LOCAL")) imode = 0;
1119 if (!strcmp(mode, "PROOF")) imode = 1;
1120 if (!strcmp(mode, "GRID")) imode = 2;
1124 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1127 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
1130 if (!kProofDataSet.Length()) {
1131 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "kProofDataSet is empty");
1134 mgr->StartAnalysis(mode, kProofDataSet, kProofEvents,kProofOffset);
1138 if (!mgr->GetGridHandler()) {
1139 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Grid plugin not initialized");
1142 mgr->StartAnalysis("grid",chain,kNumberOfEvents);
1145 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1148 mgr->StartAnalysis(mode, chain);
1149 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
1155 //______________________________________________________________________________
1156 void CheckModuleFlags(const char *mode) {
1157 // Checks selected modules and insure compatibility
1159 if (!strcmp(mode, "LOCAL")) imode = 0;
1160 if (!strcmp(mode, "PROOF")) imode = 1;
1161 if (!strcmp(mode, "GRID")) imode = 2;
1165 kPluginAliRootVersion = ""; // NO aliroot if we use CPAR
1170 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
1175 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
1176 kPluginUse = kFALSE;
1181 // switch off anthin related to MC
1187 // Decide if we have PbPb
1188 if(kGridDataSet.CompareTo("LHC10h")==0||kGridDataSet.Contains("LHC10h")) {
1189 Printf("Using settings for Pb+Pb");
1198 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
1200 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
1203 kUseAODTags = kFALSE;
1205 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
1207 if (iPhysicsSelection)
1208 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "Physics Selection disabled in analysis on AOD's");
1209 iPhysicsSelection = 0;
1212 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
1216 // Disable tasks that do not work yet on AOD data
1217 if(iPWG4JCORRAN)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 JCORRAN disabled in analysis on AOD's");
1219 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
1221 if( iPWG4PtQATPC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtTPC disabled in analysis on AOD's");
1223 if( iPWG4Cosmics)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Comics disabled in analysis on AOD's");
1226 if( iPWG4PtSpectra)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
1228 if(iPWG4KMeans)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4KMeans disabled on AOD's");
1230 if (iPWG4JetCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4Jetcorr disabled on AOD's");
1232 if (iPWG4PartCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
1234 if (iPWG4CaloQA)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4CaloQA disabled on AOD's");
1236 if (iPWG4Tagged)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4tagged disabled on AOD's");
1239 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
1241 if(iPWG1QASym)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG1 QA Sym disabled in analysis on AOD's");
1242 if (iPWG4GammaConv)::Info("AnalysisPWG4Jets.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's");
1245 iCentralitySelection = 0;
1250 iCentralitySelection = 1;
1256 if(kUseKinefilter)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Kine Filter disabled in analysis without MC");
1257 kUseKinefilter = kFALSE;
1258 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis without MC");
1260 if( iPWG4CorrectionsUE)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 CorrectionsUE disabled in analysis without MC");
1261 iPWG4CorrectionsUE = 0;
1264 if(iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "iPWG4QATPCMC disabled if not reading track references");
1271 kUseKinefilter = kFALSE;
1272 kUseMuonfilter = kFALSE;
1275 iPWG4JetSpectrum = iPWG4UE = iPWG4CorrectionsUE = iPWG4ThreeJets = iPWG4QGSep = iDIJETAN = 0;
1278 iPWG4JetTasks = iPWG4JetServices||iPWG4JetSpectrum||iPWG4UE||iPWG4LeadingUE||iPWG4PtQAMC||iPWG4PtSpectra||iPWG4PtQATPC||iPWG4Cosmics||iPWG4ThreeJets||iPWG4QGSep||iPWG4JetChem||iPWG4Minijet||iPWG4Fragmentation;
1279 iPWG4PartCorrLibs = iPWG4PartCorr||iPWG4Tagged||iPWG4CaloQA;
1280 iPWG4GammaConvLib = iPWG4GammaConv||iPWG4CaloConv;
1283 iEMCUtilLibs = iPWG4PartCorrLibs||iPWG4JCORRAN||iPWG4GammaConvLib;
1284 iJETANLib = iPWG4JetTasks||iJETAN||iDIJETAN;
1286 if (iESDfilter) {iAODhandler=1;}
1287 if (kUseKinefilter && !kUseMC) kUseKinefilter = kFALSE;
1288 if (kUseAODTags && !iAODhandler) kUseAODTags = kFALSE;
1294 //______________________________________________________________________________
1295 Bool_t Connect(const char *mode) {
1296 // Connect <username> to the back-end system.
1298 if (!strcmp(mode, "LOCAL")) imode = 0;
1299 if (!strcmp(mode, "PROOF")) imode = 1;
1300 if (!strcmp(mode, "GRID")) imode = 2;
1301 TString username = gSystem->Getenv("alien_API_USER");
1306 if (!username.Length()) {
1307 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1308 1. Have called: alien-token-init <username>\n \
1309 2. Have called: >source /tmp/gclient_env_$UID");
1312 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
1313 username.Data(), kProofCluster.Data());
1314 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
1315 // TProof::Open(Form("%s@%s:31093", username.Data(), kProofCluster.Data()));
1316 TProof::Open(Form("%s@%s", username.Data(), kProofCluster.Data()));
1318 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
1319 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
1322 if(kProofClearPackages)gProof->ClearPackages();
1324 if(kProofSaveToAlien){
1325 TGrid::Connect("alien://");
1327 TString homedir = gGrid->GetHomeDirectory();
1328 TString workdir = homedir + kTrainName;
1329 if (!gGrid->Cd(workdir)) {
1331 if (gGrid->Mkdir(workdir)) {
1332 gGrid->Cd(kTrainName);
1333 ::Info("AnalysisTrainPWG4Jets::Connect()", "Directory %s created", gGrid->Pwd());
1336 gGrid->Mkdir("proof_output");
1337 gGrid->Cd("proof_output");
1338 kProofOutdir = Form("alien://%s", gGrid->Pwd());
1343 if (!username.Length()) {
1344 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1345 1. Have called: alien-token-init <username>\n \
1346 2. Have called: >source /tmp/gclient_env_$UID");
1349 if (kPluginUse && !gSystem->Getenv("alien_CLOSE_SE")) {
1350 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode),
1351 "When using the AliEn plugin it is preferable to define the \
1352 variable alien_CLOSE_SE in your environment.");
1355 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to AliEn ...",
1357 TGrid::Connect("alien://");
1358 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
1361 ::Error("AnalysisTrainPWG4Jets.C::Connect", "Unknown run mode: %s", mode);
1364 ::Info("AnalysisTrainPWG4Jets.C::Connect","Connected in %s mode", mode);
1368 //______________________________________________________________________________
1369 Bool_t LoadCommonLibraries(const char *mode)
1371 if (!gSystem->Getenv("ALICE_ROOT_SRC")) {
1372 ::Error("AnalysisTrainPWG4Jets.C", "Analysis train requires that ALICE_ROOT_SRC is set to pick up Configurations");
1376 // Load common analysis libraries.
1378 if (!strcmp(mode, "LOCAL")) imode = 0;
1379 if (!strcmp(mode, "PROOF")) imode = 1;
1380 if (!strcmp(mode, "GRID")) imode = 2;
1381 Bool_t success = kTRUE;
1383 gSystem->Load("libTree.so");
1384 gSystem->Load("libGeom.so");
1385 gSystem->Load("libVMC.so");
1386 gSystem->Load("libPhysics.so");
1388 // Load framework classes. Par option ignored here.
1393 success &= LoadLibrary("STEERBase", mode, kTRUE);
1394 success &= LoadLibrary("ESD", mode, kTRUE);
1395 success &= LoadLibrary("AOD", mode, kTRUE);
1396 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
1397 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
1398 success &= LoadLibrary("ROOTFILES", mode, kTRUE);
1399 // success &= LoadLibrary("EventMixing", mode,kTRUE);
1400 success &= LoadLibrary("CORRFW", mode, kTRUE);
1402 success &= LoadLibrary("libSTEERBase.so", mode);
1403 success &= LoadLibrary("libESD.so", mode);
1404 success &= LoadLibrary("libAOD.so", mode);
1405 success &= LoadLibrary("libANALYSIS.so", mode);
1406 success &= LoadLibrary("libANALYSISalice.so", mode);
1407 // success &= LoadLibrary("libEventMixing.so", mode);
1408 success &= LoadLibrary("libCORRFW.so", mode);
1409 gROOT->ProcessLine(".include $ALICE_ROOT/include");
1414 if (kProofUseAFPAR && !gSystem->AccessPathName(kProofAFversion)) ires = gProof->UploadPackage(kProofAFversion);
1416 success &= LoadLibrary("STEERBase", mode);
1417 success &= LoadLibrary("ESD", mode);
1418 success &= LoadLibrary("AOD", mode);
1419 success &= LoadLibrary("ANALYSIS", mode);
1420 success &= LoadLibrary("ANALYSISalice", mode);
1421 success &= LoadLibrary("EventMixing", mode);
1422 success &= LoadLibrary("CORRFW", mode);
1424 ires = gProof->EnablePackage(kProofAFversion);
1425 if (ires<0) success = kFALSE;
1426 success &= LoadLibrary("CORRFW", mode);
1430 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
1434 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
1435 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
1436 gSystem->GetIncludePath());
1438 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: FAILED");
1444 //______________________________________________________________________________
1445 Bool_t LoadAnalysisLibraries(const char *mode)
1447 // Load common analysis libraries.
1448 Bool_t success = kTRUE;
1450 if (!LoadLibrary("TENDER", mode, kTRUE) ||
1451 !LoadLibrary("TENDERSupplies", mode, kTRUE)) return kFALSE;
1455 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
1456 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
1461 // this part needs some rework in case we do not need the fastjed finders for processing
1462 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
1463 if (!strcmp(mode, "PROOF")){
1464 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libCGAL.so\"\)", kTRUE);
1465 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libfastjet.so\"\)", kTRUE);
1466 // problem when loading siscone copiled with different gcc version??
1467 // gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libsiscone.so\"\)", kTRUE);
1468 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libSISConePlugin.so\"\)", kTRUE);
1471 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
1472 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
1473 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
1474 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
1477 // par files plus FASTJET needs some extra work... need to change
1478 // the loading sequence in the auto generated .C file
1479 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
1480 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
1481 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
1482 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
1484 if (!LoadLibrary("FASTJETAN", mode, kTRUE)) return kFALSE;
1487 if (!LoadLibrary("PWG4JetTasks", mode, kTRUE)) return kFALSE;
1491 if (!LoadSource(Form("%s/PWG1/AliAnalysisTaskQASym.cxx",gSystem->ExpandPathName("$ALICE_ROOT_SRC")), mode, kTRUE))return kFALSE;
1493 if(iPWG4TmpSourceSara){
1494 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
1495 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskEta.cxx",gSystem->ExpandPathName("$ALICE_ROOT_SRC")), mode, kTRUE))return kFALSE;
1500 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
1501 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskJetChem.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1506 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
1507 !LoadLibrary("PHOSUtils", mode, kTRUE)) return kFALSE;
1510 if (iPWG4PartCorrLibs) {
1511 if (!LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
1512 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
1515 // PWG4 particle correlations
1516 if(!LoadLibrary("PWG4JCORRAN",mode,kTRUE))return kFALSE;
1519 if (!LoadLibrary("PWG4JetCorrel", mode, kTRUE)) return kFALSE;
1521 if (iPWG4omega3pi) {
1522 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
1524 if (iPWG4GammaConvLib) {
1525 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
1528 ::Info("AnalysisTrainPWG4Jets.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
1532 //______________________________________________________________________________
1533 Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
1535 // Load a module library in a given mode. Reports success.
1538 TString smodule(module);
1539 if (!strcmp(mode, "LOCAL")) imode = 0;
1540 if (!strcmp(mode, "PROOF")) imode = 1;
1541 if (!strcmp(mode, "GRID")) imode = 2;
1542 TString mod(module);
1543 if (!mod.Length()) {
1544 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Empty module name");
1547 // If a library is specified, just load it
1548 if (smodule.EndsWith(".so")) {
1549 mod.Remove(mod.Index(".so"));
1550 result = gSystem->Load(mod);
1552 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load library %s", module);
1555 if (rec) anaLibs += Form("%s.so ",mod.Data());
1556 if (rec) anaLibsExtra += Form("%s.so ",mod.Data());
1559 // Check if the library is already loaded
1560 if (strlen(gSystem->GetLibraries(Form("%s.so", module), "", kFALSE)) > 0)
1566 result = SetupPar(module);
1567 if (rec) anaPars += Form("%s.par ", module);
1569 result = gSystem->Load(Form("lib%s.so", module));
1570 if (rec) anaLibs += Form("lib%s.so ", module);
1574 if(!gSystem->AccessPathName(module)){
1575 ::Info("AnalysisTrainPWG4Jets.C::LoadLibrary", "Removing directory %s",module);
1576 gSystem->Exec(Form("rm -rf %s",module));
1578 result = gProof->UploadPackage(module);
1580 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
1582 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
1586 result = gProof->EnablePackage(module);
1592 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load module %s", module);
1600 //______________________________________________________________________________
1601 Bool_t LoadSource(const char *source, const char *mode, Bool_t rec=kFALSE)
1603 // Load a module library in a given mode. Reports success.
1606 if (!strcmp(mode, "LOCAL")) imode = 0;
1607 if (!strcmp(mode, "PROOF")) imode = 1;
1608 if (!strcmp(mode, "GRID")) imode = 2;
1609 TString ssource(source);
1610 TString basename = gSystem->BaseName(ssource.Data());
1611 if (!ssource.Length()) {
1612 ::Error("AnalysisTrainPWG4Jets.C::LoadSource", "Empty task name");
1615 // we have a source code so compile it
1616 if (ssource.EndsWith(".cxx")) {
1617 // need to copy it here other wise the path is also used on grid...
1618 ssource.Remove(ssource.Index(".cxx"));
1619 basename.Remove(basename.Index(".cxx"));
1620 Printf("LoadSources:: Copying... path %s{cxx,h}",ssource.Data());
1621 gSystem->Exec(Form("cp %s.cxx . ",ssource.Data()));
1622 gSystem->Exec(Form("cp %s.h . ",ssource.Data()));
1624 // only needed for local compilation, in grid and proof mode
1625 // the task headers are uploaded
1626 // path.Remove(path.Index(gSystem->BaseName(path.Data())));
1627 // Printf("LoadSources:: Including path %s",path.Data());
1628 // if(path.Length()>0)gROOT->ProcessLine(Form(".include %s",path.Data()));
1629 Printf("LoadSources:: Loading... path %s",basename.Data());
1632 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
1635 result = gProof->LoadMacro(Form("%s.cxx++g",basename.Data()));
1638 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
1640 // what we want to compile
1641 anaSources += Form("%s.cxx ",basename.Data());
1642 // what we need as input...
1643 anaLibs += Form("%s.cxx %s.h ",basename.Data(),basename.Data());
1651 ::Error("AnalysisTrainPWG4Jets.C::LoadSources", "Could not load source %s", source);
1658 //______________________________________________________________________________
1659 TChain *CreateChain(const char *mode, const char *plugin_mode)
1661 // Create the input chain
1663 if (!strcmp(mode, "LOCAL")) imode = 0;
1664 if (!strcmp(mode, "PROOF")) imode = 1;
1665 if (!strcmp(mode, "GRID")) imode = 2;
1666 TChain *chain = NULL;
1671 if (!kLocalXMLDataset.Length()) {
1673 chain = new TChain("aodTree");
1676 in.open(kLocalDataList.Data());
1679 if (line.Length() == 0) continue;
1680 // cout << " line = " << line << endl;
1681 chain->Add(line.Data());
1685 chain = CreateChainSingle(kLocalXMLDataset, "aodTree");
1688 if (!kLocalXMLDataset.Length()) {
1690 chain = new TChain("esdTree");
1693 in.open(kLocalDataList.Data());
1696 if (line.Length() == 0) continue;
1697 cout << " line = " << line << endl;
1698 chain->Add(line.Data());
1702 chain = CreateChainSingle(kLocalXMLDataset, "esdTree");
1710 // AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1711 // AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1713 TString treeName = "esdTree";
1714 if (iAODanalysis) treeName = "aodTree";
1715 chain = CreateChainSingle("wn.xml", treeName);
1720 if (chain && chain->GetNtrees()) return chain;
1724 //______________________________________________________________________________
1725 TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
1727 printf("*******************************\n");
1728 printf("*** Getting the ESD Chain ***\n");
1729 printf("*******************************\n");
1730 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
1732 if (!myCollection) {
1733 ::Error("AnalysisTrainPWG4Jets.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
1737 TChain* chain = new TChain(treeName);
1738 myCollection->Reset() ;
1739 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
1744 //______________________________________________________________________________
1745 Int_t SetupPar(char* pararchivename)
1747 if (!pararchivename || !strlen(pararchivename)) return -1;
1748 char processline[1024];
1749 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
1750 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
1751 ::Info("AnalysisTrainPWG4Jets.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
1752 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
1753 Form("%s.par",pararchivename));
1755 ::Error("AnalysisTrainPWG4Jets.C::SetupPar", "Cannot find %s.par", pararchivename);
1759 if (kPluginUse && kSaveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, kTrainName.Data()));
1760 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
1762 TString ocwd = gSystem->WorkingDirectory();
1763 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
1765 // check for BUILD.sh and execute
1766 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
1767 printf("*******************************\n");
1768 printf("*** Building PAR archive ***\n");
1769 printf("*******************************\n");
1770 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
1771 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
1776 // check for SETUP.C and execute
1777 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
1778 printf("*******************************\n");
1779 printf("*** Setup PAR archive ***\n");
1780 printf("*******************************\n");
1781 gROOT->Macro("PROOF-INF/SETUP.C");
1783 if (!gSystem->ChangeDirectory(ocwd.Data())){
1784 Error("Change back directory",Form("Cannot change to %s",ocwd.Data()));
1790 //______________________________________________________________________________
1791 AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
1793 // Check if user has a valid token, otherwise make one. This has limitations.
1794 // One can always follow the standard procedure of calling alien-token-init then
1795 // source /tmp/gclient_env_$UID in the current shell.
1796 // if (!AliAnalysisGrid::CreateToken()) return NULL;
1797 AliAnalysisAlien *plugin = new AliAnalysisAlien();
1798 // Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
1799 plugin->SetRunMode(plugin_mode);
1800 if (kPluginUseProductionMode) plugin->SetProductionMode();
1801 plugin->SetJobTag(kJobTag);
1802 plugin->SetNtestFiles(1);
1803 // plugin->SetPreferedSE("ALICE::NIHAM::File");
1804 // Set versions of used packages
1805 plugin->SetAPIVersion("V1.1x");
1806 // plugin->SetAPIVersion("V1.0x");
1807 // plugin->SetAPIVersion("V2.4");
1808 plugin->SetROOTVersion(kPluginRootVersion);
1809 plugin->SetAliROOTVersion(kPluginAliRootVersion);
1810 // Declare input data to be processed.
1811 // Method 1: Create automatically XML collections using alien 'find' command.
1812 // Define production directory LFN
1813 plugin->SetGridDataDir(kGridDatadir.Data());
1814 // Set data search pattern
1815 if (iAODanalysis) plugin->SetDataPattern(" *AliAOD.Jets.root");
1816 // else plugin->SetDataPattern(Form(" %s/*/*ESD.tag.root",kGridPassPattern.Data()));
1817 else plugin->SetDataPattern(Form(" %s/*/*AliESDs.root",kGridPassPattern.Data()));
1818 // ...then add run numbers to be considered
1819 // plugin->SetRunRange(kGridRunRange[0], kGridRunRange[1]);
1820 for (Int_t i=kGridRunRange[0]; i<=kGridRunRange[1]; i++) {
1821 Printf("AnalysisTrainPWG4Jets Adding run number %s", Form(kGridRunPattern.Data(),i));
1822 plugin->AddRunNumber(Form(kGridRunPattern.Data(),i));
1825 if(kGridLocalRunList.Length()>0){
1827 in1.open(kGridLocalRunList.Data());
1835 if ( (c >= '0') && (c <= '9') )
1839 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1840 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1845 in1.getline(cLine,250);
1853 // just use run numbers, negatives will be excluded
1856 if(iRun>=0&&nRun>=kGridOffsetRunFromList&&(nRun<kGridMaxRunsFromList)){
1857 Printf("AnalysisTrainPWG4Jets Adding run number from File %d: %s",nRun,Form(kGridRunPattern.Data(),iRun));
1858 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1862 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d: %d",nRun, iRun);
1867 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d: %d",nRun, iRun);
1872 // Method 2: Declare existing data files (raw collections, xml collections, root file)
1873 // If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
1874 // XML collections added via this method can be combined with the first method if
1875 // the content is compatible (using or not tags)
1876 // plugin->AddDataFile("tag.xml");
1877 // plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
1878 // Define alien work directory where all files will be copied. Relative to alien $HOME.
1879 TString alien_workdir = "";
1881 if (iAODanalysis) alien_workdir += "analysisAOD";
1882 else alien_workdir += "analysisESD";
1883 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1884 plugin->SetGridWorkingDir(alien_workdir.Data());
1886 // Declare alien output directory. Relative to working directory.
1887 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1888 plugin->SetGridOutputDir(kGridOutdir);
1890 // Add external packages
1891 if (iJETAN||iDIJETAN) {
1892 plugin->AddExternalPackage("boost::v1_43_0");
1893 plugin->AddExternalPackage("cgal::v3.6");
1894 plugin->AddExternalPackage("fastjet::v2.4.2");
1898 // set extra libs before par file compilation
1899 anaLibs += kGridExtraFiles;
1900 anaLibs = anaLibs.Strip();
1901 Printf("anaLibs %s",anaLibs.Data());
1902 Printf("anaLibsExtra %s",anaLibsExtra.Data());
1904 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs.Data());
1905 if (anaLibsExtra.Length()) plugin->SetAdditionalRootLibs(anaLibsExtra.Data());
1907 TString ana_sources = "";
1908 TString ana_add = "";
1909 if (kUsePAR && anaPars.Length()) {
1910 printf("%s\n", anaPars.Data());
1913 arr = anaPars.Tokenize(" ");
1915 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
1919 // Declare the analysis source files names separated by blancs. To be compiled runtime
1920 // using ACLiC on the worker nodes.
1921 ana_sources = anaSources.Strip();
1922 // Declare all libraries (other than the default ones for the framework. These will be
1923 // loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
1925 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
1926 plugin->SetExecutableCommand(kPluginExecutableCommand.Data());
1927 // Declare the output file names separated by blancs.
1928 // (can be like: file.root or file.root@ALICE::Niham::File)
1929 plugin->SetMergeExcludes(kGridMergeExclude);
1930 plugin->SetMaxMergeFiles(kGridMaxMergeFiles);
1931 plugin->SetNrunsPerMaster(kGridRunsPerMaster);
1932 plugin->SetMergeViaJDL(kPluginMergeViaJDL);
1933 // Use fastread option
1934 plugin->SetFastReadOption(kPluginFastReadOption);
1935 // UseOverwrite mode
1936 plugin->SetOverwriteMode(kPluginOverwriteMode);
1937 // Optionally define the files to be archived.
1938 // plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
1939 plugin->SetOutputToRunNo(kPluginOutputToRunNumber); // write the output to subdirs named after run number
1941 // Put default output files to archive
1942 TString listhists = "";
1943 TString listaods = "";
1944 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1945 TIter next(mgr->GetOutputs());
1946 AliAnalysisDataContainer *output;
1947 while ((output=(AliAnalysisDataContainer*)next())) {
1948 const char *filename = output->GetFileName();
1949 if (!(strcmp(filename, "default"))) {
1950 if (!mgr->GetOutputEventHandler()) continue;
1951 filename = mgr->GetOutputEventHandler()->GetOutputFileName();
1952 if (listaods.Length()) listaods += " ";
1953 listaods += filename;
1955 if(!listhists.Contains(filename)){
1956 if (listhists.Length()) listhists += " ";
1957 listhists += filename;
1962 if (mgr->GetExtraFiles().Length()) {
1963 if (listaods.Length()) listaods += " ";
1964 listaods += mgr->GetExtraFiles();
1967 // if we do not fill the aod we do not need to store it
1968 // kGridMergeExclude = listaods;
1971 TString outputFiles = "";
1972 outputFiles += mgr->GetExtraFiles();
1973 if (listhists.Length()) outputFiles += " ";
1974 outputFiles += listhists;
1975 plugin->SetDefaultOutputs(kFALSE);
1976 Printf("%s:%d Starting with the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
1978 // no harm done when we try to remove something that is not there :)
1979 if(!(kSaveAOD&(1<<0))){
1980 outputFiles.ReplaceAll("AliAOD.root ","");
1981 listaods.ReplaceAll("AliAOD.root ","");
1983 if(!(kSaveAOD&(1<<1))){
1984 if(kDeltaAODJetName.Length())outputFiles.ReplaceAll(kDeltaAODJetName.Data(),"");
1985 if(kDeltaAODJetName.Length())listaods.ReplaceAll(kDeltaAODJetName.Data(),"");
1988 if(!(kSaveAOD&(1<<2))){
1989 if(kDeltaAODPartCorrName.Length())outputFiles.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
1990 if(kDeltaAODPartCorrName.Length())listaods.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
1992 if(!(kSaveAOD&(1<<3))){
1993 if(kDeltaAODJCORRANName.Length())outputFiles.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
1994 if(kDeltaAODJCORRANName.Length())listaods.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
1998 plugin->SetDefaultOutputs(kFALSE);
1999 Printf("%s:%d Saving the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
2000 plugin->SetOutputFiles(outputFiles.Data());
2003 TString outputArchive;
2004 outputArchive = Form("log_archive.zip:std*@%s","disk=1");
2005 listaods.ReplaceAll(" ", ",");
2006 listhists.ReplaceAll(" ", ",");
2007 if (listhists.Length()){
2008 outputArchive += " ";
2009 outputArchive += "root_archive.zip:";
2010 outputArchive += listhists;
2011 if (listaods.Length()){
2012 outputArchive += ",";
2013 outputArchive += listaods;
2015 outputArchive += Form("@%s", kGridOutputStorages.Data());
2019 if (listaods.Length()){
2020 // we have only aod'ish output
2021 outputArchive += " ";
2022 outputArchive += "root_archive.zip:";
2023 outputArchive += listaods;
2024 outputArchive += Form("@%s", kGridOutputStorages.Data());
2027 // no other outputs than std..
2028 ::Fatal("AnalysisTrainPWG4Jets", "No task output !");
2032 plugin->SetDefaultOutputs(kFALSE);
2033 plugin->SetOutputArchive(outputArchive);
2036 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
2037 plugin->SetAnalysisMacro(Form("%s.C", kTrainName.Data()));
2038 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
2039 plugin->SetSplitMaxInputFileNumber(kGridFilesPerJob);
2040 // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
2041 // plugin->SetMaxInitFailed(5);
2042 // Optionally resubmit threshold.
2043 // plugin->SetMasterResubmitThreshold(90);
2044 // Optionally set time to live (default 30000 sec)
2045 plugin->SetTTL(54000); // 15h...
2046 // Optionally set input format (default xml-single)
2047 plugin->SetInputFormat("xml-single");
2048 // Optionally modify the name of the generated JDL (default analysis.jdl)
2049 plugin->SetJDLName(Form("%s.jdl", kTrainName.Data()));
2050 // Optionally modify the executable name (default analysis.sh)
2051 plugin->SetExecutable(Form("%s.sh", kTrainName.Data()));
2052 // Optionally modify job price (default 1)
2053 plugin->SetPrice(1);
2054 // Optionally modify split mode (default 'se')
2055 plugin->SetSplitMode("se");
2059 //______________________________________________________________________________
2062 // Write train configuration in a file. The file name has the format:
2063 // train_[trainName]_ddMonthyyyy_time.C
2065 gSystem->Exec("date +%d%b%Y_%Hh%M > date.tmp");
2066 ifstream fdate("date.tmp");
2067 if (!fdate.is_open()) {
2068 ::Error("AnalysisTrainPWG4Jets.C::Export","Could not generate file name");
2071 const char date[64];
2072 fdate.getline(date,64);
2074 gSystem->Exec("rm date.tmp");
2075 kTrainName = Form("train_%s_%s", kTrainName.Data(), date);
2077 kTrainName = Form("train_%s", kTrainName.Data());
2079 TString cdir = gSystem->WorkingDirectory();
2080 gSystem->MakeDirectory(kTrainName);
2081 gSystem->ChangeDirectory(kTrainName);
2083 out.open(Form("%sConfig.C",kTrainName.Data()), ios::out);
2085 ::Error("AnalysisTrainPWG4Jets.C::Export", "Cannot open ConfigTrain.C for writing");
2089 out << " kTrainName = " << "\"" << kTrainName.Data() << "\";" << endl;
2090 out << " kProofCluster = " << "\"" << kProofCluster.Data() << "\";" << endl;
2091 out << " kProofUseAFPAR = " << kProofUseAFPAR << ";" << endl;
2093 out << " kProofAFversion = " << kProofAFversion.Data() << ";" << endl;
2094 out << " kProofDataSet = " << "\"" << kProofDataSet.Data() << "\";" << endl;
2095 out << " kPluginUse = " << kPluginUse << ";" << endl;
2096 out << " kUsePAR = " << kUsePAR << ";" << endl;
2097 out << " kUseCPAR = " << kUseCPAR << ";" << endl;
2098 out << " kPluginRootVersion = " << "\"" << kPluginRootVersion.Data() << "\";" << endl;
2099 out << " kPluginAliRootVersion = " << "\"" << kPluginAliRootVersion.Data() << "\";" << endl;
2100 out << " kGridDatadir = " << "\"" << kGridDatadir.Data() << "\";" << endl;
2101 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
2102 out << " kGridOutdir = " << "\"" << kGridOutdir.Data() << "\";" << endl;
2103 out << " kGridMaxMergeFiles = " << kGridMaxMergeFiles << ";" << endl;
2104 out << " kGridMergeExclude = " << "\"" << kGridMergeExclude.Data() << "\";" << endl;
2105 out << " kGridRunsPerMaster = " << kGridRunsPerMaster << ";" << endl;
2106 out << " kGridFilesPerJob = " << kGridFilesPerJob << ";" << endl;
2107 out << " kGridRunRange[0] = " << kGridRunRange[0] << ";" << endl;
2108 out << " kGridRunRange[1] = " << kGridRunRange[1] << ";" << endl;
2109 out << " kUseDebug = " << kUseDebug << ";" << endl;
2110 out << " kUseMC = " << kUseMC << ";" << endl;
2111 out << " kUseESDTags = " << kUseESDTags << ";" << endl;
2112 out << " kUseKinefilter = " << kUseKinefilter << ";" << endl;
2113 out << " kUseTR = " << kUseTR << ";" << endl;
2114 out << " kUseAODTags = " << kUseAODTags << ";" << endl;
2115 out << " kSaveTrain = " << "kFALSE;" << endl << endl;
2116 out << " // Analysis modules" << endl;
2117 out << " iAODanalysis = " << iAODanalysis << ";" << endl;
2118 out << " iAODhandler = " << iAODhandler << ";" << endl;
2119 out << " iESDfilter = " << iESDfilter << ";" << endl;
2120 out << " iJETAN = " << iJETAN << ";" << endl;
2121 out << "// Configuration fot the wagons" << endl;
2123 ::Info("AnalysisTrainPWG4Jets.C::WriteConfig", "Train configuration wrote to file %s", Form("config_%s.C", kTrainName.Data()));
2124 gSystem->ChangeDirectory(cdir);
2127 //______________________________________________________________________________
2128 Bool_t LoadConfig(const char *filename)
2130 // Read train configuration from file
2131 if (gSystem->AccessPathName(filename)) {
2132 ::Error("AnalysisTrainPWG4Jets.C::LoadConfig", "Config file name not found");
2135 gROOT->ProcessLine(Form(".x %s", filename));
2136 ::Info("AnalysisTrainPWG4Jets.C::LoadConfig", "Train configuration loaded from file %s", filename);
2141 Printf(">>> Patching JDL");
2142 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
2143 AliAnalysisAlien* gridHandler = (AliAnalysisAlien*)mgr->GetGridHandler();
2144 TGridJDL *jdl = gridHandler->GetGridJDL();
2145 if(iJETAN)jdl->AddToPackages("fastjet","v2.4.0");
2146 gridHandler->WriteJDL(kFALSE);
2147 Printf("<<< Patching JDL");
2151 Bool_t PatchAnalysisMacro(){
2152 Printf(">>> Patching AnalysisMacro");
2153 gSystem->Exec(Form("mv %s.C %s.C_tmp",kTrainName.Data(),kTrainName.Data()));
2156 in1.open(Form("%s.C_tmp", kTrainName.Data()));
2159 while(in1.getline(cLine,250)){
2164 index = st.Index("gSystem->Load(\"libPhysics\");");
2165 index += strlen("gSystem->Load(\"libPhysics\");");
2169 arr = anaLibs.Tokenize(" ");
2172 add += "\n\n // added by CKB \n";
2173 while ((objstr=(TObjString*)next())){
2174 if(objstr->GetString().Contains("PWG3"))continue;
2175 if(objstr->GetString().EndsWith(".so"))add += Form("gSystem->Load(\"%s\");\n",objstr->GetString().Data());
2179 // add += Form("AliLog::SetGlobalLogLevel(%d);\n",AliLog::GetGlobalLogLevel());
2182 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2183 add += "\n\n // added by CKB \n";
2184 if(kErrorIgnoreLevel>0)add += Form("gErrorIgnoreLevel = %d;\n",kErrorIgnoreLevel);
2185 add += "\n gSystem->AddIncludePath(\"./\"); \n";
2186 add += "\n gSystem->SetFPEMask(); \n";
2189 if(gGrid&&kPluginAliRootVersion.Length()==0){
2191 add += "\n // Dirty hack for TRD reference data \n";
2192 add += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2193 add += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2198 add += "// BKC \n\n";
2199 st.Insert(index,add.Data());
2202 // st.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
2205 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
2206 index = st.Index("gSystem->AddIncludePath(\"-I$"); // uncommen $ALICE_ROOT include for par files
2207 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2208 st.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2211 if(AliLog::GetGlobalLogLevel()==AliLog::kFatal){
2212 index = st.Index("AliLog::SetGlobal"); // ncomment setting of log level, do my own
2213 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2214 st.Insert(index,"AliLog::SetGlobalLogLevel(AliLog::kFatal);// CKB \n // CKB comment out for own setting \n //");
2218 out.open(Form("%s.C", kTrainName.Data()));
2223 Printf("<<< Patching AnalysisMacro");
2229 Printf(">>> Patching Merge Macro");
2230 gSystem->Exec(Form("mv %s_merge.C %s_merge.C_tmp",kTrainName.Data(),kTrainName.Data()));
2233 in2.open(Form("%s_merge.C_tmp", kTrainName.Data()));
2235 while(in2.getline(cLine,250)){
2239 index = st2.Index("gSystem->Load(\"libPhysics\");");
2240 index += strlen("gSystem->Load(\"libPhysics\");");
2242 add2 += "\n gSystem->AddIncludePath(\"./\"); \n";
2243 if(gGrid&&kPluginAliRootVersion.Length()==0){
2245 add2 += "\n // Dirty hack for TRD reference data \n";
2246 add2 += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2247 add2 += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2251 add2 += "// BKC \n\n";
2252 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2253 st2.Insert(index,add.Data());
2257 // st2.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
2260 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
2261 index = st2.Index("gSystem->AddIncludePath(\"-I$"); // uncomment $ALICE_ROOT include for par files
2262 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2263 st2.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2266 // do not exclude the extra files from merign, this is done explicitly in this train script
2267 // index = st2.Index("mergeExcludes +="); // uncommen $ALICE_ROOT include for par files
2268 // if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2269 // st2.Insert(index,"// CKB comment out, handled explicitly by the train macro \n //");
2273 out2.open(Form("%s_merge.C", kTrainName.Data()));
2277 out2 << st2 << endl;
2278 Printf("<<< Patching Merging Macro");