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1 /**************************************************************************
2  * Copyright(c) 1998-2009, ALICE Experiment at CERN, All rights reserved. *
3  *                                                                        *
4  * Author: The ALICE Off-line Project.                                    *
5  * Contributors are mentioned in the code where appropriate.              *
6  *                                                                        *
7  * Permission to use, copy, modify and distribute this software and its   *
8  * documentation strictly for non-commercial purposes is hereby granted   *
9  * without fee, provided that the above copyright notice appears in all   *
10  * copies and that both the copyright notice and this permission notice   *
11  * appear in the supporting documentation. The authors make no claims     *
12  * about the suitability of this software for any purpose. It is          *
13  * provided "as is" without express or implied warranty.                  *
14  **************************************************************************/
15
16 /* $Id$ */
17
18 /////////////////////////////////////////////////////////////
19 //
20 // AliAnalysisTaskSE for HF quality assurance
21 //
22 // Author: Chiara Bianchin, chiara.bianchin@pd.infn.it
23 /////////////////////////////////////////////////////////////
24
25 #include <Riostream.h>
26 #include <TClonesArray.h>
27 #include <TCanvas.h>
28 #include <TList.h>
29 #include <TH1F.h>
30 #include <TH2F.h>
31 #include <TDatabasePDG.h>
32
33 #include <AliAnalysisDataSlot.h>
34 #include <AliAnalysisDataContainer.h>
35 #include "AliAnalysisManager.h"
36 #include "AliESDtrack.h"
37 #include "AliVertexerTracks.h"
38 #include "AliPID.h"
39 #include "AliTPCPIDResponse.h"
40 #include "AliAODHandler.h"
41 #include "AliAODEvent.h"
42 #include "AliAODVertex.h"
43 #include "AliAODTrack.h"
44 #include "AliAODMCParticle.h"
45 #include "AliAODMCHeader.h"
46 #include "AliAODRecoDecayHF2Prong.h"
47 #include "AliAODRecoCascadeHF.h"
48 #include "AliAnalysisVertexingHF.h"
49 #include "AliAnalysisTaskSE.h"
50 #include "AliCounterCollection.h"
51 #include "AliRDHFCuts.h"
52 #include "AliRDHFCutsDplustoKpipi.h"
53 #include "AliRDHFCutsD0toKpipipi.h"
54 #include "AliRDHFCutsDstoKKpi.h"
55 #include "AliRDHFCutsDStartoKpipi.h"
56 #include "AliRDHFCutsD0toKpi.h"
57 #include "AliRDHFCutsLctopKpi.h"
58 #include "AliInputEventHandler.h"
59
60 #include "AliAnalysisTaskSEHFQA.h"
61
62 ClassImp(AliAnalysisTaskSEHFQA)
63
64 //____________________________________________________________________________
65
66 AliAnalysisTaskSEHFQA::AliAnalysisTaskSEHFQA():AliAnalysisTaskSE(),
67   fNEntries(0x0),
68   fOutputPID(0x0),
69   fOutputTrack(0x0),
70   fOutputCounters(0x0),
71   fOutputCheckCentrality(0x0),
72   fOutputEvSelection(0x0),
73   fDecayChannel(AliAnalysisTaskSEHFQA::kD0toKpi),
74   fCuts(0x0),
75   fEstimator(AliRDHFCuts::kCentTRK),
76   fReadMC(kFALSE),
77   fSimpleMode(kFALSE),
78   fOnOff()
79 {
80   //default constructor
81   fOnOff[0]=kTRUE;
82   fOnOff[1]=kTRUE;
83   fOnOff[2]=kTRUE;
84   fOnOff[3]=kTRUE;
85 }
86
87 //____________________________________________________________________________
88 AliAnalysisTaskSEHFQA::AliAnalysisTaskSEHFQA(const char *name, AliAnalysisTaskSEHFQA::DecChannel ch,AliRDHFCuts* cuts):
89   AliAnalysisTaskSE(name),
90   fNEntries(0x0),
91   fOutputPID(0x0),
92   fOutputTrack(0x0),
93   fOutputCounters(0x0),
94   fOutputCheckCentrality(0x0),
95   fOutputEvSelection(0x0),
96   fDecayChannel(ch),
97   fCuts(0x0),
98   fEstimator(AliRDHFCuts::kCentTRK),
99   fReadMC(kFALSE),
100   fSimpleMode(kFALSE),
101   fOnOff()
102 {
103   //constructor
104
105   //SetCutObject(cuts);
106   fCuts=cuts;
107
108   fOnOff[0]=kTRUE;
109   fOnOff[1]=kTRUE;
110   fOnOff[2]=kTRUE;
111   fOnOff[3]=kTRUE;
112
113   // Output slot #1 writes into a TH1F container (number of events)
114   DefineOutput(1,TH1F::Class());  //My private output
115   // Output slot #2 writes into a TList container (PID)
116   if (fOnOff[1]) DefineOutput(2,TList::Class());  //My private output
117   // Output slot #3 writes into a TList container (Tracks)
118   if (fOnOff[0]) DefineOutput(3,TList::Class());  //My private output
119   // Output slot #4 writes into a AliRDHFCuts container (cuts)
120   switch(fDecayChannel){
121   case 0:
122     DefineOutput(4,AliRDHFCutsDplustoKpipi::Class());  //My private output
123     break;
124   case 1:
125     DefineOutput(4,AliRDHFCutsD0toKpi::Class());  //My private output
126     break;
127   case 2:
128     DefineOutput(4,AliRDHFCutsDStartoKpipi::Class());  //My private output
129     break;
130   case 3:
131     DefineOutput(4,AliRDHFCutsDstoKKpi::Class());  //My private output
132     break;
133   case 4:
134     DefineOutput(4,AliRDHFCutsD0toKpipipi::Class());  //My private output
135     break;
136   case 5:
137     DefineOutput(4,AliRDHFCutsLctopKpi::Class());  //My private output
138     break;
139   }
140   if (fOnOff[2]) {
141     // Output slot #5 writes into a TList container (AliCounterCollection)
142     DefineOutput(5,TList::Class());  //My private output
143     // Output slot #6 writes into a TList container (TH1F)
144     DefineOutput(6,TList::Class());  //My private output
145   }
146
147   if(fOnOff[3]) DefineOutput(7,TList::Class());  //My private output
148
149 }
150
151 //___________________________________________________________________________
152 AliAnalysisTaskSEHFQA::~AliAnalysisTaskSEHFQA()
153 {
154   //destructor
155   delete fNEntries;
156
157   delete fOutputPID;
158
159   delete fOutputTrack;
160
161   delete fOutputCounters;
162
163   delete fOutputCheckCentrality;
164
165   delete fOutputEvSelection;
166
167 }
168
169 //___________________________________________________________________________
170 void AliAnalysisTaskSEHFQA::Init(){
171
172   //initialization
173   if(fDebug > 1) printf("AnalysisTaskSEHFQA::Init() \n");
174
175   switch(fDecayChannel){
176   case 0:
177     {
178       AliRDHFCutsDplustoKpipi* copycut=new AliRDHFCutsDplustoKpipi(*(static_cast<AliRDHFCutsDplustoKpipi*>(fCuts)));
179       // Post the data
180       PostData(4,copycut);
181     }
182     break;
183   case 1:
184     {
185       AliRDHFCutsD0toKpi* copycut=new AliRDHFCutsD0toKpi(*(static_cast<AliRDHFCutsD0toKpi*>(fCuts)));
186       // Post the data
187       PostData(4,copycut);
188     }
189     break;
190   case 2:
191     {
192       AliRDHFCutsDStartoKpipi* copycut=new AliRDHFCutsDStartoKpipi(*(static_cast<AliRDHFCutsDStartoKpipi*>(fCuts)));
193       // Post the data
194       PostData(4,copycut);
195     }
196     break;
197   case 3:
198     {
199       AliRDHFCutsDstoKKpi* copycut=new AliRDHFCutsDstoKKpi(*(static_cast<AliRDHFCutsDstoKKpi*>(fCuts)));
200       // Post the data
201       PostData(4,copycut);
202     }
203     break;
204   case 4:
205     {
206       AliRDHFCutsD0toKpipipi* copycut=new AliRDHFCutsD0toKpipipi(*(static_cast<AliRDHFCutsD0toKpipipi*>(fCuts)));
207       // Post the data
208       PostData(4,copycut);
209     }
210     break;
211   case 5:
212     {
213       AliRDHFCutsLctopKpi* copycut=new AliRDHFCutsLctopKpi(*(static_cast<AliRDHFCutsLctopKpi*>(fCuts)));
214       // Post the data
215       PostData(4,copycut);
216     }
217     break;
218
219   default:
220     return;
221   }
222
223
224
225 }
226
227 //___________________________________________________________________________
228 void AliAnalysisTaskSEHFQA::UserCreateOutputObjects()
229 {
230
231   //create the output container
232   if(fDebug > 1) printf("AnalysisTaskSEHFQA::UserCreateOutputObjects() \n");
233
234   //count events
235
236   fNEntries=new TH1F(GetOutputSlot(1)->GetContainer()->GetName(), "Counts the number of events", 10,-0.5,9.5);
237   fNEntries->GetXaxis()->SetBinLabel(1,"nEventsAnal");
238   fNEntries->GetXaxis()->SetBinLabel(2,"Pile-up Rej");
239   fNEntries->GetXaxis()->SetBinLabel(3,"No VertexingHF");
240   fNEntries->GetXaxis()->SetBinLabel(4,"nCandidates(AnCuts)");
241   fNEntries->GetXaxis()->SetBinLabel(5,"EventsWithGoodVtx");
242   //fNEntries->GetXaxis()->SetBinLabel(6,"N. of 0SMH");
243   fNEntries->GetXaxis()->SetBinLabel(6,"N. of CSH1");
244   if(fReadMC){
245     fNEntries->GetXaxis()->SetBinLabel(7,"MC Cand from c");
246     fNEntries->GetXaxis()->SetBinLabel(8,"MC Cand from b");
247     fNEntries->GetXaxis()->SetBinLabel(9,"N fake Trks");
248     fNEntries->GetXaxis()->SetBinLabel(10,"N true Trks");
249   } else{
250     fNEntries->GetXaxis()->SetBinLabel(7,"N candidates");
251   }
252
253   fNEntries->GetXaxis()->SetNdivisions(1,kFALSE);
254
255   //PID
256   if(fOnOff[1]){
257     fOutputPID=new TList();
258     fOutputPID->SetOwner();
259     fOutputPID->SetName(GetOutputSlot(2)->GetContainer()->GetName());
260
261     //TOF pid
262     TH1F* hTOFflags=new TH1F("hTOFflags","TOF flags",6,-0.5,5.5);
263     hTOFflags->SetMinimum(0.);
264     hTOFflags->GetXaxis()->SetBinLabel(1,"All Tracks");
265     hTOFflags->GetXaxis()->SetBinLabel(2,"kTPCout");
266     hTOFflags->GetXaxis()->SetBinLabel(3,"kTOFout");
267     hTOFflags->GetXaxis()->SetBinLabel(4,"kTIME");
268     hTOFflags->GetXaxis()->SetBinLabel(5,"kTOFpid");
269     hTOFflags->GetXaxis()->SetBinLabel(6,"kTOFmismatch");
270
271     TString hname="hTOFsig";
272     TH1F* hTOFsig=new TH1F(hname.Data(),"Distribution of TOF signal;TOF time [ps];Entries", 100, -2.e3,40.e3);
273
274     hname="hTOFtime";
275     TH1F* hTOFtime=new TH1F(hname.Data(),"Distribution of TOF time Kaon;TOF time(Kaon) [ps];Entries", 1000, 0.,50000.);
276
277     hname="hTOFtimeKaonHyptime";
278     TH2F* hTOFtimeKaonHyptime=new TH2F(hname.Data(),"TOFtime - timeHypothesisForKaon;p[GeV/c];TOFtime - timeHypothesisForKaon [ps]",500,0.,10.,1000,-20000.,20000.);
279
280     hname="hTOFtimeKaonHyptimeAC";
281     TH2F* hTOFtimeKaonHyptimeAC=new TH2F(hname.Data(),"TOFtime - timeHypothesisForKaon;p[GeV/c];TOFtime - timeHypothesisForKaon [ps]",500,0.,10.,1000,-20000.,20000.);
282
283     hname="hTOFsigmaKSigPid";
284     TH2F* hTOFsigmaKSigPid=new TH2F(hname.Data(),"(TOFsignal-timeK)/tofSigPid;p[GeV/c];(TOFsignal-timeK)/tofSigPid",500,0.,10.,400,-20,20);
285
286     hname="hTOFsigmaPionSigPid";
287     TH2F* hTOFsigmaPionSigPid=new TH2F(hname.Data(),"(TOFsignal-time#pi)/tofSigPid;p[GeV/c];(TOFsignal-time#pi)/tofSigPid",500,0.,10.,400,-20,20);
288
289     hname="hTOFsigmaProtonSigPid";
290     TH2F* hTOFsigmaProtonSigPid=new TH2F(hname.Data(),"(TOFsignal-timep)/tofSigPid;p[GeV/c];(TOFsignal-time p)/tofSigPid",500,0.,10.,400,-20,20);
291
292     hname="hTOFsigPid3sigPion";
293     TH1F* hTOFsigPid3sigPion=new TH1F(hname.Data(),"TOF PID resolution (#pi) [ps]",500,0.,1000.);
294
295     hname="hTOFsigPid3sigKaon";
296     TH1F* hTOFsigPid3sigKaon=new TH1F(hname.Data(),"TOF PID resolution (K) [ps]",500,0.,1000.);
297
298     hname="hTOFsigPid3sigProton";
299     TH1F* hTOFsigPid3sigProton=new TH1F(hname.Data(),"TOF PID resolution (p) [ps]",500,0.,1000.);
300
301
302     //TPC pid
303     hname="hTPCsig";
304     TH1F* hTPCsig=new TH1F(hname.Data(),"Distribution of TPC signal;TPC sig;Entries", 100, 35.,100.);
305
306     hname="hTPCsigvsp";
307     TH2F* hTPCsigvsp=new TH2F(hname.Data(),"TPCsig vs p;TPC p[GeV/c];TPCsig",500,0.,10.,1000,35.,100.);
308  
309     hname="hTPCsigvspAC";
310     TH2F* hTPCsigvspAC=new TH2F(hname.Data(),"TPCsig vs p;TPCp[GeV/c];TPCsig",500,0.,10.,1000,35.,100.);
311
312     hname="hTPCsigmaK";
313     TH2F* hTPCsigmaK=new TH2F(hname.Data(),"TPC Sigma for K as a function of momentum;p[GeV/c];Sigma Kaon",500,0.,10.,400,-20,20);
314
315     hname="hTPCsigmaPion";
316     TH2F* hTPCsigmaPion=new TH2F(hname.Data(),"TPC Sigma for #pi as a function of momentum;p[GeV/c];Sigma #pi",500,0.,10.,400,-20,20);
317
318     hname="hTPCsigmaProton";
319     TH2F* hTPCsigmaProton=new TH2F(hname.Data(),"TPC Sigma for proton as a function of momentum;p[GeV/c];Sigma Proton",500,0.,10.,400,-20,20);
320
321     fOutputPID->Add(hTOFflags);
322     fOutputPID->Add(hTOFsig);
323     fOutputPID->Add(hTPCsig);
324     fOutputPID->Add(hTOFtime);
325     fOutputPID->Add(hTOFtimeKaonHyptime);
326     fOutputPID->Add(hTOFtimeKaonHyptimeAC);
327     fOutputPID->Add(hTOFsigmaKSigPid);
328     fOutputPID->Add(hTOFsigmaPionSigPid);
329     fOutputPID->Add(hTOFsigmaProtonSigPid);
330     fOutputPID->Add(hTOFsigPid3sigPion);
331     fOutputPID->Add(hTOFsigPid3sigKaon);
332     fOutputPID->Add(hTOFsigPid3sigProton);
333     fOutputPID->Add(hTPCsigvsp);
334     fOutputPID->Add(hTPCsigvspAC);
335     fOutputPID->Add(hTPCsigmaK);
336     fOutputPID->Add(hTPCsigmaPion);
337     fOutputPID->Add(hTPCsigmaProton);
338   }
339
340   //quality of the tracks
341   if(fOnOff[0]){
342     fOutputTrack=new TList();
343     fOutputTrack->SetOwner();
344     fOutputTrack->SetName(GetOutputSlot(3)->GetContainer()->GetName());
345
346     TString hname="hnClsITS";
347     TH1F* hnClsITS=new TH1F(hname.Data(),"Distribution of number of ITS clusters;nITScls;Entries",7,-0.5,6.5);
348
349     hname="hnClsITSselTr";
350     TH1F* hnClsITSselTr=new TH1F(hname.Data(),"Distribution of number of ITS clusters selected tracks;nITScls;Entries",7,-0.5,6.5);
351
352     hname="hnClsITS-SA";
353     TH1F* hnClsITSSA=new TH1F(hname.Data(),"Distribution of number of ITS clusters(ITS-SA);nITScls;Entries",7,-0.5,6.5);
354
355
356     hname="hnLayerITS";
357     TH1F* hnLayerITS=new TH1F(hname.Data(),"Number of tracks with point in layer;ITS layer;",7,-1.5,5.5);
358     hnLayerITS->GetXaxis()->SetBinLabel(1,"n tracks");
359
360     hname="hnLayerITSsa";
361     TH1F* hnLayerITSsa=new TH1F(hname.Data(),"Number of tracks with point in layer;ITS layer;",7,-1.5,5.5);
362     hnLayerITSsa->GetXaxis()->SetBinLabel(1,"n tracks");
363    
364     hname="hnClsSPD";
365     TH1F* hnClsSPD=new TH1F(hname.Data(),"Distribution of number of SPD clusters;nSPDcls;Entries",3,-0.5,2.5);
366
367     hname="hptGoodTr";
368     TH1F* hptGoodTr=new TH1F(hname.Data(),"Pt distribution of 'good' tracks;p_{t}[GeV];Entries/0.05 GeV/c",400,0.,20.);
369     hptGoodTr->SetTitleOffset(1.3,"Y");
370
371     hname="hdistrGoodTr";
372     TH1F* hdistrGoodTr=new TH1F(hname.Data(),"Distribution of number of 'good' tracks per event;no.good-tracks/ev;Entries",4000,-0.5,3999.5);
373     hdistrGoodTr->SetTitleOffset(1.3,"Y");
374
375     hname="hd0";
376     TH1F* hd0=new TH1F(hname.Data(),"Impact parameter (rphi) distribution of 'good' tracks;d_{0rphi}[cm];Entries/10^{3} cm",200,-0.1,0.1);
377
378     hname="hd0z";
379     TH1F* hd0z=new TH1F(hname.Data(),"Impact parameter (z) distribution of 'good' tracks;d_{0z}[cm];Entries/10^{3} cm",200,-0.1,0.1);
380
381     fOutputTrack->Add(hnClsITS);
382     fOutputTrack->Add(hnClsITSselTr);
383     fOutputTrack->Add(hnClsITSSA);
384     fOutputTrack->Add(hnLayerITS);
385     fOutputTrack->Add(hnLayerITSsa);
386     fOutputTrack->Add(hnClsSPD);
387     fOutputTrack->Add(hptGoodTr);
388     fOutputTrack->Add(hdistrGoodTr);
389     fOutputTrack->Add(hd0);
390     fOutputTrack->Add(hd0z);
391
392     if(fReadMC){
393       hname="hdistrFakeTr";
394       TH1F* hdistrFakeTr=new TH1F(hname.Data(),"Distribution of number of fake tracks per event;no.fake-tracks/ev;Entries",4000,-0.5,3999.5);
395       hdistrGoodTr->SetTitleOffset(1.3,"Y");
396
397       hname="hd0f";
398       TH1F* hd0f=new TH1F(hname.Data(),"Impact parameter distribution of fake tracks;d_{0}[cm];Entries/10^{3} cm",200,-0.1,0.1);
399
400       hname="hptFakeTr";
401       TH1F* hptFakeTr=new TH1F(hname.Data(),"Pt distribution of fake tracks;p_{t}[GeV];Entries/0.05 GeV/c",400,0.,20.);
402       hptFakeTr->SetTitleOffset(1.3,"Y");
403
404       fOutputTrack->Add(hptFakeTr);
405       fOutputTrack->Add(hdistrFakeTr);
406       fOutputTrack->Add(hd0f);
407    
408     }
409   }
410
411   
412   if(fOnOff[2] && fCuts->GetUseCentrality()){
413
414     //Centrality (Counters)
415     fOutputCounters=new TList();
416     fOutputCounters->SetOwner();
417     fOutputCounters->SetName(GetOutputSlot(5)->GetContainer()->GetName());
418
419     AliCounterCollection *stdEstimator=new AliCounterCollection("stdEstimator");
420     stdEstimator->AddRubric("run",500000);
421     stdEstimator->AddRubric("centralityclass","-10_0/0_10/10_20/20_30/30_40/40_50/50_60/60_70/70_80/80_90/90_100/-990_-980");
422     stdEstimator->Init();
423     AliCounterCollection *secondEstimator=new AliCounterCollection("secondEstimator");
424     secondEstimator->AddRubric("run",500000);
425     secondEstimator->AddRubric("centralityclass","-10_0/0_10/10_20/20_30/30_40/40_50/50_60/60_70/70_80/80_90/90_100/-990_-980");
426     secondEstimator->Init();
427  
428     fOutputCounters->Add(stdEstimator);
429     fOutputCounters->Add(secondEstimator);
430  
431     //Centrality (Checks)
432     fOutputCheckCentrality=new TList();
433     fOutputCheckCentrality->SetOwner();
434     fOutputCheckCentrality->SetName(GetOutputSlot(6)->GetContainer()->GetName());
435
436     TString hname="hNtrackletsIn";
437     TH1F* hNtrackletsIn=new TH1F(hname.Data(),"Number of tracklets in Centrality range;ntracklets;Entries",5000,-0.5,4999.5);
438
439     hname="hMultIn";
440     TH1F* hMultIn=new TH1F(hname.Data(),"Multiplicity;multiplicity in Centrality range;Entries",10000,-0.5,9999.5);
441
442     hname="hNtrackletsOut";
443     TH1F* hNtrackletsOut=new TH1F(hname.Data(),"Number of tracklets out of Centrality range;ntracklets;Entries",5000,-0.5,4999.5);
444
445     hname="hMultOut";
446     TH1F* hMultOut=new TH1F(hname.Data(),"Multiplicity out of Centrality range;multiplicity;Entries",10000,-0.5,9999.5);
447
448     hname="hMultvsPercentile";
449     TH2F* hMultvsPercentile=new TH2F(hname.Data(),"Multiplicity vs Percentile;multiplicity;percentile",10000,-0.5,9999.5,12,-10.,110);
450
451
452     fOutputCheckCentrality->Add(hNtrackletsIn);
453     fOutputCheckCentrality->Add(hNtrackletsOut);
454     fOutputCheckCentrality->Add(hMultIn);
455     fOutputCheckCentrality->Add(hMultOut);
456     fOutputCheckCentrality->Add(hMultvsPercentile);
457
458     PostData(6,fOutputCheckCentrality);
459   
460   } else{
461     if(fOnOff[0]){
462       TString hname="hNtracklets";
463       TH1F* hNtracklets=new TH1F(hname.Data(),"Number of tracklets;ntracklets;Entries",5000,-0.5,4999.5);
464
465       hname="hMult";
466       TH1F* hMult=new TH1F(hname.Data(),"Multiplicity;multiplicity;Entries",10000,-0.5,9999.5);
467       fOutputTrack->Add(hNtracklets);
468       fOutputTrack->Add(hMult);
469     }
470   }
471
472   //event selection (z vertex for the moment)
473   if(fOnOff[3]){
474     fOutputEvSelection=new TList();
475     fOutputEvSelection->SetOwner();
476     fOutputEvSelection->SetName(GetOutputSlot(7)->GetContainer()->GetName());
477     AliCounterCollection *evselection=new AliCounterCollection("evselection");
478     evselection->AddRubric("run",500000);
479     evselection->AddRubric("evnonsel","zvtx");
480     evselection->Init();
481
482     TH1F* hzvtx=new TH1F("hzvtx", "Distribution of z_{VTX};z_{VTX} [cm];Entries",100,-20,20);
483
484
485     TH2F* hTrigCent=new TH2F("hTrigCent","Centrality vs. Trigger types",11,-0.5,10.5,12,-10,110);
486     hTrigCent->GetXaxis()->SetBinLabel(1,"All");
487     hTrigCent->GetXaxis()->SetBinLabel(2,"kMB");
488     hTrigCent->GetXaxis()->SetBinLabel(3,"kINT7");
489     hTrigCent->GetXaxis()->SetBinLabel(4,"kCINT5");
490     hTrigCent->GetXaxis()->SetBinLabel(5,"kCent");
491     hTrigCent->GetXaxis()->SetBinLabel(6,"kSemiCent");
492     hTrigCent->GetXaxis()->SetBinLabel(7,"kEMC1+7");
493     hTrigCent->GetXaxis()->SetBinLabel(8,"kEMCJET+GAMMA");
494     hTrigCent->GetXaxis()->SetBinLabel(9,"Muons");
495     hTrigCent->GetXaxis()->SetBinLabel(10,"PHOS");
496     hTrigCent->GetXaxis()->SetBinLabel(11,"Others");
497
498     TH2F* hTrigMul=new TH2F("hTrigMul","Multiplicity vs. Trigger types",11,-0.5,10.5,100,0.,10000.);
499     hTrigMul->GetXaxis()->SetBinLabel(1,"All");
500     hTrigMul->GetXaxis()->SetBinLabel(2,"kMB");
501     hTrigMul->GetXaxis()->SetBinLabel(3,"kINT7");
502     hTrigMul->GetXaxis()->SetBinLabel(4,"kCINT5");
503     hTrigMul->GetXaxis()->SetBinLabel(5,"kCent");
504     hTrigMul->GetXaxis()->SetBinLabel(6,"kSemiCent");
505     hTrigMul->GetXaxis()->SetBinLabel(7,"kEMC1+7");
506     hTrigMul->GetXaxis()->SetBinLabel(8,"kEMCJET+GAMMA");
507     hTrigMul->GetXaxis()->SetBinLabel(9,"Muons");
508     hTrigMul->GetXaxis()->SetBinLabel(10,"PHOS");
509     hTrigMul->GetXaxis()->SetBinLabel(11,"Others");
510
511     TH2F* hTrigCentSel=new TH2F("hTrigCentSel","Trigger types",11,-0.5,10.5,12,-10,110);
512     hTrigCentSel->GetXaxis()->SetBinLabel(1,"All");
513     hTrigCentSel->GetXaxis()->SetBinLabel(2,"kMB");
514     hTrigCentSel->GetXaxis()->SetBinLabel(3,"kINT7");
515     hTrigCentSel->GetXaxis()->SetBinLabel(4,"kCINT5");
516     hTrigCentSel->GetXaxis()->SetBinLabel(5,"kCent");
517     hTrigCentSel->GetXaxis()->SetBinLabel(6,"kSemiCent");
518     hTrigCentSel->GetXaxis()->SetBinLabel(7,"kEMC1+7");
519     hTrigCentSel->GetXaxis()->SetBinLabel(8,"kEMCJET+GAMMA");
520     hTrigCentSel->GetXaxis()->SetBinLabel(9,"Muons");
521     hTrigCentSel->GetXaxis()->SetBinLabel(10,"PHOS");
522     hTrigCentSel->GetXaxis()->SetBinLabel(11,"Others");
523
524     AliCounterCollection *trigCounter=new AliCounterCollection("trigCounter");
525     trigCounter->AddRubric("run",500000);
526     trigCounter->AddRubric("triggerType","Any/MB/Cent/SemiCent/EMCAL");
527     trigCounter->Init();
528
529     fOutputEvSelection->Add(evselection);
530     fOutputEvSelection->Add(hzvtx);
531     fOutputEvSelection->Add(hTrigCent);
532     fOutputEvSelection->Add(hTrigMul);
533     fOutputEvSelection->Add(hTrigCentSel);
534     fOutputEvSelection->Add(trigCounter);
535   }
536 //  AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
537 //  AliInputEventHandler *inputHandler=(AliInputEventHandler*)mgr->GetInputEventHandler();
538 //  AliPIDResponse *pidResp=inputHandler->GetPIDResponse();
539 //  fCuts->GetPidHF()->SetPidResponse(pidResp);
540   // Post the data
541   PostData(1,fNEntries);
542   if(fOnOff[1]) PostData(2,fOutputPID);
543   if(fOnOff[0]) PostData(3,fOutputTrack);
544   PostData(4,fCuts);
545   if(fOnOff[2]) PostData(5,fOutputCounters);
546   if(fOnOff[3]) PostData(7,fOutputEvSelection);
547
548   if(!fOnOff[0] && !fOnOff[1] && !fOnOff[2]) AliError("Nothing will be filled!");
549 }
550
551 //___________________________________________________________________________
552 void AliAnalysisTaskSEHFQA::UserExec(Option_t */*option*/)
553 {
554   // Execute analysis for current event
555
556   AliAODEvent *aod = dynamic_cast<AliAODEvent*> (InputEvent());
557   if(fDebug>2) printf("Analysing decay %d\n",fDecayChannel);
558   // Post the data already here
559   PostData(1,fNEntries);
560   if(fOnOff[1]) PostData(2,fOutputPID);
561   if(fOnOff[0]) PostData(3,fOutputTrack);
562   PostData(4,fCuts);
563   if(fOnOff[2]) {
564     PostData(5,fOutputCounters);
565     if(fCuts->GetUseCentrality()) PostData(6,fOutputCheckCentrality);
566   }
567
568   TClonesArray *arrayProng =0;
569   Int_t pdg=0;
570   Int_t *pdgdaughters=0x0;
571
572   if(!aod && AODEvent() && IsStandardAOD()) { 
573     // In case there is an AOD handler writing a standard AOD, use the AOD 
574     // event in memory rather than the input (ESD) event.    
575     aod = dynamic_cast<AliAODEvent*> (AODEvent());
576     // in this case the braches in the deltaAOD (AliAOD.VertexingHF.root)
577     // have to taken from the AOD event hold by the AliAODExtension
578     AliAODHandler* aodHandler = (AliAODHandler*) 
579       ((AliAnalysisManager::GetAnalysisManager())->GetOutputEventHandler());
580     if(aodHandler->GetExtensions()) {
581       
582       AliAODExtension *ext = (AliAODExtension*)aodHandler->GetExtensions()->FindObject("AliAOD.VertexingHF.root");
583       AliAODEvent *aodFromExt = ext->GetAOD();
584    
585    
586       
587       switch(fDecayChannel){
588       case 0:
589         arrayProng=(TClonesArray*)aodFromExt->GetList()->FindObject("Charm3Prong");
590         pdg=411;
591         if(fReadMC){
592           pdgdaughters =new Int_t[3];
593           pdgdaughters[0]=211;//pi
594           pdgdaughters[1]=321;//K
595           pdgdaughters[2]=211;//pi
596         }
597         break; 
598       case 1:
599         arrayProng=(TClonesArray*)aodFromExt->GetList()->FindObject("D0toKpi");
600         pdg=421;
601         if(fReadMC){
602           pdgdaughters =new Int_t[2];
603           pdgdaughters[0]=211;//pi 
604           pdgdaughters[1]=321;//K
605         }
606         break; 
607       case 2:
608         arrayProng=(TClonesArray*)aodFromExt->GetList()->FindObject("Dstar");
609         pdg=413;
610         if(fReadMC){
611           pdgdaughters =new Int_t[3];
612           pdgdaughters[1]=211;//pi
613           pdgdaughters[0]=321;//K
614           pdgdaughters[2]=211;//pi (soft?)
615         }
616         break; 
617       case 3:
618         arrayProng=(TClonesArray*)aodFromExt->GetList()->FindObject("Charm3Prong");
619         pdg=431;
620         if(fReadMC){
621           pdgdaughters =new Int_t[3];
622           pdgdaughters[0]=321;//K
623           pdgdaughters[1]=321;//K
624           pdgdaughters[2]=211;//pi
625         }
626         break; 
627       case 4:
628         arrayProng=(TClonesArray*)aodFromExt->GetList()->FindObject("Charm4Prong");
629         pdg=421;
630         if(fReadMC){
631           pdgdaughters =new Int_t[4];
632           pdgdaughters[0]=321;
633           pdgdaughters[1]=211;
634           pdgdaughters[2]=211;
635           pdgdaughters[3]=211;
636         }
637         break; 
638       case 5:
639         arrayProng=(TClonesArray*)aodFromExt->GetList()->FindObject("Charm3Prong");
640         pdg=4122;
641         if(fReadMC){
642           pdgdaughters =new Int_t[3];
643           pdgdaughters[0]=2212;//p
644           pdgdaughters[1]=321;//K
645           pdgdaughters[2]=211;//pi
646         }
647         break; 
648       }
649     }
650   } else if(aod) {
651     switch(fDecayChannel){
652     case 0:
653       arrayProng=(TClonesArray*)aod->GetList()->FindObject("Charm3Prong");
654       pdg=411;
655       if(fReadMC){
656         pdgdaughters =new Int_t[3];
657         pdgdaughters[0]=211;//pi
658         pdgdaughters[1]=321;//K
659         pdgdaughters[2]=211;//pi
660       }
661       break; 
662     case 1:
663       arrayProng=(TClonesArray*)aod->GetList()->FindObject("D0toKpi");
664       pdg=421;
665       if(fReadMC){
666         pdgdaughters =new Int_t[2];
667         pdgdaughters[0]=211;//pi 
668         pdgdaughters[1]=321;//K
669       }
670       break; 
671     case 2:
672       arrayProng=(TClonesArray*)aod->GetList()->FindObject("Dstar");
673       pdg=413;
674       if(fReadMC){
675         pdgdaughters =new Int_t[3];
676         pdgdaughters[1]=211;//pi
677         pdgdaughters[0]=321;//K
678         pdgdaughters[2]=211;//pi (soft?)
679       }
680       break; 
681     case 3:
682       arrayProng=(TClonesArray*)aod->GetList()->FindObject("Charm3Prong");
683       pdg=431;
684       if(fReadMC){
685         pdgdaughters =new Int_t[3];
686         pdgdaughters[0]=321;//K
687         pdgdaughters[1]=321;//K
688         pdgdaughters[2]=211;//pi
689       }
690       break; 
691     case 4:
692       arrayProng=(TClonesArray*)aod->GetList()->FindObject("Charm4Prong");
693       pdg=421;
694       if(fReadMC){
695         pdgdaughters =new Int_t[4];
696         pdgdaughters[0]=321;
697         pdgdaughters[1]=211;
698         pdgdaughters[2]=211;
699         pdgdaughters[3]=211;
700       }
701       break; 
702     case 5:
703       arrayProng=(TClonesArray*)aod->GetList()->FindObject("Charm3Prong");
704       pdg=4122;
705       if(fReadMC){
706         pdgdaughters =new Int_t[3];
707         pdgdaughters[0]=2212;//p
708         pdgdaughters[1]=321;//K
709         pdgdaughters[2]=211;//pi
710       }
711       break; 
712     }
713   }
714   Bool_t isSimpleMode=fSimpleMode;
715   if(!arrayProng) {
716     AliInfo("Branch not found! The output will contain only trak related histograms\n");
717     isSimpleMode=kTRUE;
718     fNEntries->Fill(2);
719   }
720   
721   TClonesArray *mcArray = 0;
722   AliAODMCHeader *mcHeader = 0;
723
724   if(!aod) {
725     delete [] pdgdaughters;
726     return;
727   }
728
729   //check if MC
730   if(fReadMC) {
731     // load MC particles
732     mcArray = (TClonesArray*)aod->GetList()->FindObject(AliAODMCParticle::StdBranchName());
733     if(!mcArray) {
734       printf("AliAnalysisTaskSEHFQA::UserExec: MC particles branch not found!\n");
735       delete [] pdgdaughters;
736       return;
737     }
738     
739     // load MC header
740     mcHeader = (AliAODMCHeader*)aod->GetList()->FindObject(AliAODMCHeader::StdBranchName());
741     if(!mcHeader) {
742       printf("AliAnalysisTaskSEHFQA::UserExec: MC header branch not found!\n");
743       delete [] pdgdaughters;
744       return;
745     }
746   }
747
748   
749   UInt_t evSelMask=((AliInputEventHandler*)(AliAnalysisManager::GetAnalysisManager()->GetInputEventHandler()))->IsEventSelected();
750   Double_t centrality=fCuts->GetCentrality(aod);
751   Double_t multiplicity=aod->GetHeader()->GetRefMultiplicity();
752   Int_t runNumber = aod->GetRunNumber();
753   if(fOnOff[3]){
754     TH2F* hTrigC=(TH2F*)fOutputEvSelection->FindObject("hTrigCent");
755     TH2F* hTrigM=(TH2F*)fOutputEvSelection->FindObject("hTrigMul");
756     AliCounterCollection* trigCount=(AliCounterCollection*)fOutputEvSelection->FindObject("trigCounter");
757
758     hTrigC->Fill(0.,centrality);
759     hTrigM->Fill(0.,multiplicity);
760     trigCount->Count(Form("triggerType:Any/Run:%d",runNumber));
761   
762     if(evSelMask & AliVEvent::kMB){
763       hTrigC->Fill(1.,centrality);
764       hTrigM->Fill(1.,multiplicity);
765       trigCount->Count(Form("triggerType:MB/Run:%d",runNumber));
766     }
767     if(evSelMask & AliVEvent::kINT7){ 
768       hTrigC->Fill(2.,centrality);
769       hTrigM->Fill(2.,multiplicity);
770     }
771     if(evSelMask & AliVEvent::kCINT5){ 
772       hTrigC->Fill(3.,centrality);
773       hTrigM->Fill(3.,multiplicity);
774     }
775     if(evSelMask & AliVEvent::kCentral){
776       hTrigC->Fill(4.,centrality);
777       hTrigM->Fill(4.,multiplicity);
778       trigCount->Count(Form("triggerType:Cent/Run:%d",runNumber));
779     }
780     if(evSelMask & AliVEvent::kSemiCentral){ 
781       hTrigC->Fill(5.,centrality);
782       hTrigM->Fill(5.,multiplicity);
783       trigCount->Count(Form("triggerType:SemiCent/Run:%d",runNumber));
784     }
785     if(evSelMask & (AliVEvent::kEMC1 | AliVEvent::kEMC7)){
786       hTrigC->Fill(6.,centrality);
787       hTrigM->Fill(6.,multiplicity);
788     }
789     if(evSelMask & (AliVEvent::kEMCEJE | AliVEvent::kEMCEGA)){
790       hTrigC->Fill(7.,centrality);
791       hTrigM->Fill(7.,multiplicity);
792       trigCount->Count(Form("triggerType:EMCAL/Run:%d",runNumber));
793     }
794     if(evSelMask & (((AliVEvent::kCMUS5 | AliVEvent::kMUSH7) | (AliVEvent::kMUL7 | AliVEvent::kMUU7)) |  (AliVEvent::kMUS7 | AliVEvent::kMUON))){
795       hTrigC->Fill(8.,centrality);
796       hTrigM->Fill(8.,multiplicity);
797     }
798     if(evSelMask & (AliVEvent::kPHI1 | AliVEvent::kPHI7)){ 
799       hTrigC->Fill(9.,centrality);
800       hTrigM->Fill(9.,multiplicity);
801     }
802     if(evSelMask & (AliVEvent::kDG5 | AliVEvent::kZED)){
803       hTrigC->Fill(10.,centrality);
804       hTrigM->Fill(10.,multiplicity);
805     }
806   }
807   
808
809   // fix for temporary bug in ESDfilter 
810   // the AODs with null vertex pointer didn't pass the PhysSel
811   if(!aod->GetPrimaryVertex() || TMath::Abs(aod->GetMagneticField())<0.001) {
812     delete [] pdgdaughters;
813     return;
814   }
815
816   // count event
817   fNEntries->Fill(0); 
818
819   //count events with good vertex
820   // AOD primary vertex
821   AliAODVertex *vtx1 = (AliAODVertex*)aod->GetPrimaryVertex();
822   TString primTitle = vtx1->GetTitle();
823   if(primTitle.Contains("VertexerTracks") && vtx1->GetNContributors()>0) fNEntries->Fill(4);
824
825   // trigger class for PbPb C0SMH-B-NOPF-ALLNOTRD, C0SMH-B-NOPF-ALL
826   //TString trigclass=aod->GetFiredTriggerClasses();
827   //if(trigclass.Contains("C0SMH-B-NOPF-ALLNOTRD") || trigclass.Contains("C0SMH-B-NOPF-ALL")) fNEntries->Fill(5); //tmp
828
829
830
831
832   Bool_t evSelbyCentrality=kTRUE,evSelected=kTRUE,evSelByVertex=kTRUE,evselByPileup=kFALSE;
833   //select event
834   if(!fCuts->IsEventSelected(aod)) {
835     evSelected=kFALSE;
836     if(fCuts->GetWhyRejection()==1) {fNEntries->Fill(1); evselByPileup=kTRUE;}// rejected for pileup
837     if(fCuts->GetWhyRejection()==2 || fCuts->GetWhyRejection()==3) evSelbyCentrality=kFALSE; //rejected by centrality
838     if(fCuts->GetWhyRejection()==4) evSelByVertex=kFALSE; //rejected by vertex
839     if(fCuts->GetWhyRejection()==5) fNEntries->Fill(5);//tmp
840     if(fCuts->GetWhyRejection()==6 && fOnOff[3]) ((AliCounterCollection*)fOutputEvSelection->FindObject("evselection"))->Count(Form("evnonsel:zvtx/Run:%d",runNumber));
841   }
842   if(evSelected){
843     TH2F* hTrigS=(TH2F*)fOutputEvSelection->FindObject("hTrigCentSel");
844     hTrigS->Fill(0.,centrality);
845
846     if(evSelMask & AliVEvent::kMB) hTrigS->Fill(1.,centrality);
847     if(evSelMask & AliVEvent::kINT7) hTrigS->Fill(2.,centrality);
848     if(evSelMask & AliVEvent::kCINT5) hTrigS->Fill(3.,centrality);
849     if(evSelMask & AliVEvent::kCentral) hTrigS->Fill(4.,centrality);
850     if(evSelMask & AliVEvent::kSemiCentral) hTrigS->Fill(5.,centrality);
851     if(evSelMask & (AliVEvent::kEMC1 | AliVEvent::kEMC7)) hTrigS->Fill(6.,centrality);
852     if(evSelMask & (AliVEvent::kEMCEJE | AliVEvent::kEMCEGA)) hTrigS->Fill(7.,centrality);
853     if(evSelMask & (((AliVEvent::kCMUS5 | AliVEvent::kMUSH7) | (AliVEvent::kMUL7 | AliVEvent::kMUU7)) |  (AliVEvent::kMUS7 | AliVEvent::kMUON))) hTrigS->Fill(8.,centrality);
854     if(evSelMask & (AliVEvent::kPHI1 | AliVEvent::kPHI7)) hTrigS->Fill(9.,centrality);
855     if(evSelMask & (AliVEvent::kDG5 | AliVEvent::kZED)) hTrigS->Fill(10.,centrality);
856   }
857   
858   if(evSelected || (!evSelected && !evSelbyCentrality && evSelByVertex && !evselByPileup)){ //events selected or not selected because of vtx or pileup
859     if(fOnOff[2] && fCuts->GetUseCentrality()){
860
861       Float_t stdCentf=fCuts->GetCentrality(aod);
862       Int_t stdCent = (Int_t)(stdCentf+0.5);
863       Float_t secondCentf =fCuts->GetCentrality(aod,fEstimator);
864       Int_t secondCent = (Int_t)(secondCentf+0.5);
865       Int_t mincent=stdCent-stdCent%10;
866       if(stdCentf==-1) {
867         mincent=-10; 
868         stdCent=-1;
869       }
870       if(mincent==100)mincent--;
871       ((AliCounterCollection*)fOutputCounters->FindObject("stdEstimator"))->Count(Form("centralityclass:%d_%d/Run:%d",mincent,mincent+10,runNumber));
872
873       mincent=secondCent-secondCent%10;
874       if(secondCentf==-1) {
875         mincent=-10;
876         secondCent=-1;
877       }
878       if(mincent==100)mincent--;
879       ((AliCounterCollection*)fOutputCounters->FindObject("secondEstimator"))->Count(Form("centralityclass:%d_%d/Run:%d",mincent,mincent+10,runNumber));
880
881       if(stdCent<fCuts->GetMinCentrality() || stdCent>fCuts->GetMaxCentrality()){
882         ((TH1F*)fOutputCheckCentrality->FindObject("hNtrackletsOut"))->Fill(aod->GetTracklets()->GetNumberOfTracklets());
883         ((TH1F*)fOutputCheckCentrality->FindObject("hMultOut"))->Fill(aod->GetHeader()->GetRefMultiplicity());
884       }else{
885         ((TH1F*)fOutputCheckCentrality->FindObject("hNtrackletsIn"))->Fill(aod->GetTracklets()->GetNumberOfTracklets());
886         ((TH1F*)fOutputCheckCentrality->FindObject("hMultIn"))->Fill(aod->GetHeader()->GetRefMultiplicity());
887       }
888       ((TH2F*)fOutputCheckCentrality->FindObject("hMultvsPercentile"))->Fill(aod->GetHeader()->GetRefMultiplicity(),stdCentf);
889
890       PostData(6,fOutputCheckCentrality);
891
892     } else{
893       if(fOnOff[0]){
894         ((TH1F*)fOutputTrack->FindObject("hNtracklets"))->Fill(aod->GetTracklets()->GetNumberOfTracklets());
895         ((TH1F*)fOutputTrack->FindObject("hMult"))->Fill(aod->GetHeader()->GetRefMultiplicity());
896       }
897     }
898   }
899
900   if(fOnOff[3]){
901     const AliVVertex *vertex = aod->GetPrimaryVertex();
902     Double_t zvtx=vertex->GetZ();
903     if(evSelected || (!evSelected && TMath::Abs(zvtx) > 10.))
904     ((TH1F*)fOutputEvSelection->FindObject("hzvtx"))->Fill(zvtx);
905   }
906
907   if(!evSelected) {
908     delete [] pdgdaughters;
909     return; //discard all events not selected (vtx and/or centrality)
910   }
911
912
913   AliAODPidHF* pidHF=fCuts->GetPidHF();
914   if(!pidHF) {
915     delete [] pdgdaughters;
916     return;
917   }
918   AliPIDResponse* respF=pidHF->GetPidResponse();
919   AliTPCPIDResponse* tpcres=new AliTPCPIDResponse();
920   if(pidHF->GetOldPid()) pidHF->SetBetheBloch(*tpcres);
921   Bool_t oldPID=pidHF->GetOldPid();
922
923
924   Int_t ntracks=0;
925   Int_t isGoodTrack=0, isFakeTrack=0;
926
927   if(aod) ntracks=aod->GetNTracks();
928
929   if(fOnOff[0] || fOnOff[1]){
930     //loop on tracks in the event
931     for (Int_t k=0;k<ntracks;k++){
932       AliAODTrack* track=aod->GetTrack(k);
933       AliAODPid *pid = track->GetDetPid();
934
935
936       if(fOnOff[1]){
937         if(!pid)  {if (fDebug>1)cout<<"No AliAODPid found"<<endl; continue;}
938         Double_t times[AliPID::kSPECIES];
939         pid->GetIntegratedTimes(times);
940     
941         Double_t tofRes[AliPID::kSPECIES];
942         pid->GetTOFpidResolution(tofRes);
943
944         //check TOF
945         TH1F* htmpfl=((TH1F*)fOutputPID->FindObject("hTOFflags"));
946         htmpfl->Fill(0.);
947         if (track->GetStatus()&AliESDtrack::kTPCout) htmpfl->Fill(1.);
948         if (track->GetStatus()&AliESDtrack::kTOFout) htmpfl->Fill(2.);
949         if (track->GetStatus()&AliESDtrack::kTIME) htmpfl->Fill(3.);
950         if (track->GetStatus()&AliESDtrack::kTOFpid) htmpfl->Fill(4.);
951         if (track->GetStatus()&AliESDtrack::kTOFmismatch) htmpfl->Fill(5.);
952
953         if(pidHF && pidHF->CheckStatus(track,"TOF")){
954           ((TH1F*)fOutputPID->FindObject("hTOFtime"))->Fill(times[AliPID::kProton]);
955           ((TH2F*)fOutputPID->FindObject("hTOFtimeKaonHyptime"))->Fill(track->P(),pid->GetTOFsignal()-times[3]); //3 is kaon
956           ((TH1F*)fOutputPID->FindObject("hTOFsig"))->Fill(pid->GetTOFsignal());
957           if (pid->GetTOFsignal()< 0) ((TH1F*)fOutputPID->FindObject("hTOFsig"))->Fill(-1);
958
959           
960           // test TOF sigma PID
961           if (tofRes[2] != 0.) {   // protection against 'old' AODs...
962             ((TH2F*)fOutputPID->FindObject("hTOFsigmaKSigPid"))->Fill(track->P(),(pid->GetTOFsignal()-times[AliPID::kKaon])/tofRes[3]);
963             ((TH2F*)fOutputPID->FindObject("hTOFsigmaPionSigPid"))->Fill(track->P(),(pid->GetTOFsignal()-times[AliPID::kPion])/tofRes[2]);
964             ((TH2F*)fOutputPID->FindObject("hTOFsigmaProtonSigPid"))->Fill(track->P(),(pid->GetTOFsignal()-times[AliPID::kProton])/tofRes[4]);
965             for (Int_t iS=2; iS<5; iS++){ //we plot TOF Pid resolution for 3-sigma identified particles
966               if ( (TMath::Abs(times[iS]-pid->GetTOFsignal())/tofRes[iS])<3.){
967                 switch (iS) {
968                 case AliPID::kPion:
969                   ((TH1F*)fOutputPID->FindObject("hTOFsigPid3sigPion"))->Fill(tofRes[iS]);
970                   break;
971                 case AliPID::kKaon:
972                   ((TH1F*)fOutputPID->FindObject("hTOFsigPid3sigKaon"))->Fill(tofRes[iS]);
973                   break;
974                 case AliPID::kProton:
975                   ((TH1F*)fOutputPID->FindObject("hTOFsigPid3sigProton"))->Fill(tofRes[iS]);
976                   break;
977                 default:
978                   break;
979                 }
980               }
981             }
982           }
983         }//if TOF status
984
985         if(pidHF && pidHF->CheckStatus(track,"TPC")){ 
986
987           Double_t TPCp=pid->GetTPCmomentum();
988           Double_t TPCsignal=pid->GetTPCsignal();
989           ((TH1F*)fOutputPID->FindObject("hTPCsig"))->Fill(TPCsignal);
990           ((TH1F*)fOutputPID->FindObject("hTPCsigvsp"))->Fill(TPCp,TPCsignal);
991           //if (pidHF->IsKaonRaw(track, "TOF"))
992           if(!oldPID) ((TH2F*)fOutputPID->FindObject("hTPCsigmaK"))->Fill(TPCp,respF->NumberOfSigmasTPC(track,AliPID::kKaon));
993           if (oldPID) ((TH2F*)fOutputPID->FindObject("hTPCsigmaK"))->Fill(TPCp,tpcres->GetNumberOfSigmas(TPCp,TPCsignal,track->GetTPCNcls(),AliPID::kKaon));
994           //if (pidHF->IsPionRaw(track, "TOF"))
995           if(oldPID) ((TH2F*)fOutputPID->FindObject("hTPCsigmaPion"))->Fill(TPCp,tpcres->GetNumberOfSigmas(TPCp,TPCsignal,track->GetTPCNcls(),AliPID::kPion));
996           if(!oldPID) ((TH2F*)fOutputPID->FindObject("hTPCsigmaPion"))->Fill(TPCp,respF->NumberOfSigmasTPC(track,AliPID::kPion));
997           //if (pidHF->IsProtonRaw(track,"TOF"))
998           if(oldPID) ((TH2F*)fOutputPID->FindObject("hTPCsigmaProton"))->Fill(TPCp,tpcres->GetNumberOfSigmas(TPCp,TPCsignal,track->GetTPCNcls(),AliPID::kProton));
999           if(!oldPID) ((TH2F*)fOutputPID->FindObject("hTPCsigmaProton"))->Fill(TPCp,respF->NumberOfSigmasTPC(track,AliPID::kProton));
1000         }//if TPC status
1001       } //end PID histograms
1002
1003       Int_t nclsTot=0,nclsSPD=0;
1004
1005       //check clusters of the tracks
1006       if(fOnOff[0]){
1007
1008         ((TH1F*)fOutputTrack->FindObject("hnLayerITS"))->Fill(-1);
1009         for(Int_t l=0;l<6;l++) {
1010           if(TESTBIT(track->GetITSClusterMap(),l)) {
1011             ((TH1F*)fOutputTrack->FindObject("hnLayerITS"))->Fill(l);
1012             nclsTot++; if(l<2) nclsSPD++;
1013           }
1014         }
1015         ((TH1F*)fOutputTrack->FindObject("hnClsITS"))->Fill(nclsTot);
1016         ((TH1F*)fOutputTrack->FindObject("hnClsSPD"))->Fill(nclsSPD);
1017         if(track->Pt()>0.3 &&
1018            TMath::Abs(track->Eta())<0.8 &&
1019            track->GetStatus()&AliESDtrack::kITSrefit &&
1020            track->GetStatus()&AliESDtrack::kTPCrefit &&
1021            nclsSPD>0){
1022           ((TH1F*)fOutputTrack->FindObject("hnClsITSselTr"))->Fill(nclsTot);
1023         }
1024         if(!(track->GetStatus()&AliESDtrack::kTPCin) && track->GetStatus()&AliESDtrack::kITSrefit && !(track->GetStatus()&AliESDtrack::kITSpureSA)){//tracks retrieved in the ITS and not reconstructed in the TPC
1025           ((TH1F*)fOutputTrack->FindObject("hnClsITS-SA"))->Fill(nclsTot);
1026           ((TH1F*)fOutputTrack->FindObject("hnLayerITS"))->Fill(-1);
1027           for(Int_t l=0;l<6;l++) {
1028             if(TESTBIT(track->GetITSClusterMap(),l)) {
1029               ((TH1F*)fOutputTrack->FindObject("hnLayerITSsa"))->Fill(l);
1030             }
1031           }
1032         }
1033         Int_t label=0;
1034         if(fReadMC){
1035           label=track->GetLabel();
1036           if (label<0)fNEntries->Fill(8);
1037           else fNEntries->Fill(9); 
1038         }
1039
1040         if(isSimpleMode){
1041
1042           if (track->Pt()>0.3 &&
1043               track->GetStatus()&AliESDtrack::kTPCrefit &&
1044               track->GetStatus()&AliESDtrack::kITSrefit &&
1045               /*nclsTot>3 &&*/
1046               nclsSPD>0) {//count good tracks
1047
1048             
1049             if(fReadMC && label<0) {
1050               ((TH1F*)fOutputTrack->FindObject("hptFakeTr"))->Fill(track->Pt());
1051               isFakeTrack++;    
1052             } else {
1053               ((TH1F*)fOutputTrack->FindObject("hptGoodTr"))->Fill(track->Pt());
1054               isGoodTrack++;
1055             }
1056           }
1057         } //simple mode: no IsSelected on tracks: use "manual" cuts   
1058       } //fill track histos
1059     } //end loop on tracks
1060
1061       //fill once per event
1062     if(fOnOff[0]){
1063       if (fReadMC) ((TH1F*)fOutputTrack->FindObject("hdistrFakeTr"))->Fill(isFakeTrack);
1064       ((TH1F*)fOutputTrack->FindObject("hdistrGoodTr"))->Fill(isGoodTrack);
1065     }
1066
1067     if(!isSimpleMode){
1068       // loop over candidates
1069       Int_t nCand = arrayProng->GetEntriesFast();
1070       Int_t ndaugh=3;
1071       if(fDecayChannel==AliAnalysisTaskSEHFQA::kD0toKpi) ndaugh=2;
1072       if(fDecayChannel==AliAnalysisTaskSEHFQA::kD0toKpipipi) ndaugh=4;
1073
1074       for (Int_t iCand = 0; iCand < nCand; iCand++) {
1075         AliAODRecoDecayHF *d = (AliAODRecoDecayHF*)arrayProng->UncheckedAt(iCand);
1076         if(d->GetSelectionMap()) {
1077           if(fDecayChannel==AliAnalysisTaskSEHFQA::kD0toKpi && !d->HasSelectionBit(AliRDHFCuts::kD0toKpiCuts)) continue; //skip the D0 from Dstar
1078           if(fDecayChannel==AliAnalysisTaskSEHFQA::kDplustoKpipi && !d->HasSelectionBit(AliRDHFCuts::kDplusCuts)) continue; //skip the 3 prong !D+
1079         }
1080
1081         if(fReadMC){ 
1082           Int_t labD = d->MatchToMC(pdg,mcArray,ndaugh,pdgdaughters);
1083           if(labD>=0){
1084             AliAODMCParticle *partD = (AliAODMCParticle*)mcArray->At(labD);
1085             Int_t label=partD->GetMother();
1086             AliAODMCParticle *mot = (AliAODMCParticle*)mcArray->At(label);
1087             while(label>=0){//get first mother
1088               mot = (AliAODMCParticle*)mcArray->At(label);
1089               label=mot->GetMother();
1090             }
1091             Int_t pdgMotCode = mot->GetPdgCode();
1092         
1093             if(TMath::Abs(pdgMotCode)==4) fNEntries->Fill(6); //from primary charm
1094             if(TMath::Abs(pdgMotCode)==5) fNEntries->Fill(7); //from beauty
1095
1096           }
1097         }//end MC
1098         else fNEntries->Fill(6); //count the candidates (data)
1099
1100         for(Int_t id=0;id<ndaugh;id++){
1101
1102           //other histograms to be filled when the cut object is given
1103           AliAODTrack* track=(AliAODTrack*)d->GetDaughter(id);
1104
1105           //track quality
1106
1107           if (fCuts->IsInFiducialAcceptance(d->Pt(),d->Y(pdg)) && fCuts->IsSelected(d,AliRDHFCuts::kTracks,aod)) {
1108             
1109             Int_t label=0;
1110             if(fReadMC)label=track->GetLabel();
1111             if(fOnOff[0]){
1112               
1113               if(fReadMC && label<0) {
1114                 isFakeTrack++;
1115                 ((TH1F*)fOutputTrack->FindObject("hptFakeTr"))->Fill(track->Pt());
1116            
1117                 ((TH1F*)fOutputTrack->FindObject("hd0f"))->Fill(d->Getd0Prong(id));
1118               } else {
1119                 isGoodTrack++;
1120                 ((TH1F*)fOutputTrack->FindObject("hptGoodTr"))->Fill(track->Pt());
1121                 ((TH1F*)fOutputTrack->FindObject("hd0"))->Fill(d->Getd0Prong(id));
1122                 Double_t d0rphiz[2],covd0[3];
1123                 Bool_t isDCA=track->PropagateToDCA(aod->GetPrimaryVertex(),aod->GetMagneticField(),9999.,d0rphiz,covd0);
1124                 if(isDCA) ((TH1F*)fOutputTrack->FindObject("hd0z"))->Fill(d0rphiz[1]);
1125               }
1126             }
1127             if (fCuts->IsSelected(d,AliRDHFCuts::kAll,aod) && fOnOff[1]){
1128           
1129               AliAODPid *pid = track->GetDetPid();
1130               Double_t times[5];
1131               pid->GetIntegratedTimes(times);
1132               if(pidHF && pidHF->CheckStatus(track,"TOF")) ((TH2F*)fOutputPID->FindObject("hTOFtimeKaonHyptimeAC"))->Fill(track->P(),pid->GetTOFsignal()-times[AliPID::kKaon]);
1133               if(pidHF && pidHF->CheckStatus(track,"TPC")) ((TH2F*)fOutputPID->FindObject("hTPCsigvspAC"))->Fill(pid->GetTPCmomentum(),pid->GetTPCsignal());
1134
1135               fNEntries->Fill(3);
1136             } //end analysis cuts
1137           } //end acceptance and track cuts
1138         } //end loop on tracks in the candidate
1139       } //end loop on candidates
1140       if(fOnOff[0]){
1141         if(fReadMC) ((TH1F*)fOutputTrack->FindObject("hdistrFakeTr"))->Fill(isFakeTrack);
1142         ((TH1F*)fOutputTrack->FindObject("hdistrGoodTr"))->Fill(isGoodTrack);
1143       }
1144     }
1145   } //end if on pid or track histograms
1146
1147   delete tpcres;
1148   delete [] pdgdaughters;
1149   PostData(1,fNEntries);
1150   if(fOnOff[1]) PostData(2,fOutputPID);
1151   if(fOnOff[0]) PostData(3,fOutputTrack);
1152   PostData(4,fCuts);
1153   if(fOnOff[2]) PostData(5,fOutputCounters);
1154   //Post data 6 done in case of centrality on   
1155
1156 }
1157
1158 //____________________________________________________________________________
1159 void AliAnalysisTaskSEHFQA::Terminate(Option_t */*option*/){
1160   //terminate analysis
1161
1162   fNEntries = dynamic_cast<TH1F*>(GetOutputData(1));
1163   if(!fNEntries){
1164     printf("ERROR: %s not available\n",GetOutputSlot(1)->GetContainer()->GetName());
1165     return;
1166   }
1167
1168   fOutputPID = dynamic_cast<TList*> (GetOutputData(2));
1169   if (!fOutputPID && fOnOff[1]) {     
1170     printf("ERROR: %s not available\n",GetOutputSlot(2)->GetContainer()->GetName());
1171     return;
1172   }
1173
1174   fOutputTrack = dynamic_cast<TList*> (GetOutputData(3));
1175   if (!fOutputTrack && fOnOff[0]) {     
1176     printf("ERROR: %s not available\n",GetOutputSlot(3)->GetContainer()->GetName());
1177     return;
1178   }
1179
1180 }
1181