TRD/AliTRDCalibPadStatus.cxx

   1 /**************************************************************************
   2  * Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. *
   3  *                                                                        *
   4  * Author: The ALICE Off-line Project.                                    *
   5  * Contributors are mentioned in the code where appropriate.              *
   6  *                                                                        *
   7  * Permission to use, copy, modify and distribute this software and its   *
   8  * documentation strictly for non-commercial purposes is hereby granted   *
   9  * without fee, provided that the above copyright notice appears in all   *
  10  * copies and that both the copyright notice and this permission notice   *
  11  * appear in the supporting documentation. The authors make no claims     *
  12  * about the suitability of this software for any purpose. It is          *
  13  * provided "as is" without express or implied warranty.                  *
  14  **************************************************************************/
  15
  16 /* $Id$ */
  17
  18 ////////////////////////////////////////////////////////////////////////////
  19 //                                                                        //
  20 // Example: fill pedestal with Gaussian noise                             //
  21 //                                                                        //
  22 //  AliTRDCalibPadStatus ped;                                             //
  23 //  ped.TestEvent(numberofevent);                                         //
  24 //                                                                        //
  25 //  // Method without histo                                               //
  26 //  ped.Analyse();                                                        //
  27 //                                                                        //
  28 //  // Create the histo of the AliTRDCalROC                               //
  29 //  TH2F * histo2dm = ped.GetCalRocMean(0,kFALSE)->MakeHisto2D();         //
  30 //  histo2dm->Scale(10.0);                                                //
  31 //  TH1F * histo1dm = ped.GetCalRocMean(0,kFALSE)->MakeHisto1D();         //
  32 //  histo1dm->Scale(10.0);                                                //
  33 //  TH2F * histo2ds = ped.GetCalRocSquares(0,kFALSE)->MakeHisto2D();      //
  34 //  histo2ds->Scale(10.0);                                                //
  35 //  TH1F * histo1ds = ped.GetCalRocSquares(0,kFALSE)->MakeHisto1D();      //
  36 //  histo1ds->Scale(10.0)                                                 //
  37 //                                                                        //
  38 //  // Draw output                                                        //
  39 //  TCanvas* c1 = new TCanvas;                                            //
  40 //  c1->Divide(2,2);                                                      //
  41 //  c1->cd(1);                                                            //
  42 //  histo2dm->Draw("colz");                                               //
  43 //  c1->cd(2);                                                            //
  44 //  histo1dm->Draw();                                                     //
  45 //  c1->cd(3);                                                            //
  46 //  histo2ds->Draw("colz");                                               //
  47 //  c1->cd(4);                                                            //
  48 //  histo1ds->Draw();                                                     //
  49 //                                                                        //
  50 //  // Method with histo                                                  //
  51 //  ped.AnalyseHisto();                                                   //
  52 //                                                                        //
  53 //  // Take the histo                                                     //
  54 //  TH1F *histo = ped.GetHisto(31);                                       //
  55 //  histo->SetEntries(1);                                                 //
  56 //  histo->Draw();                                                        //
  57 //                                                                        //
  58 ////////////////////////////////////////////////////////////////////////////
  59
  60 //Root includes
  61 #include <TObjArray.h>
  62 #include <TH2F.h>
  63 #include <TString.h>
  64 #include <TMath.h>
  65 #include <TRandom.h>
  66 #include <TDirectory.h>
  67 #include <TFile.h>
  68
  69 //AliRoot includes
  70 #include <AliMathBase.h>
  71 #include "AliRawReader.h"
  72 #include "AliRawReaderRoot.h"
  73 #include "AliRawReaderDate.h"
  74
  75 //header file
  76 #include "AliLog.h"
  77 #include "AliTRDCalibPadStatus.h"
  78 #include "AliTRDrawStreamBase.h"
  79 #include "AliTRDgeometry.h"
  80 #include "AliTRDCommonParam.h"
  81 #include "./Cal/AliTRDCalROC.h"
  82 #include "./Cal/AliTRDCalPadStatus.h"
  83 #include "./Cal/AliTRDCalDet.h"
  84 #include "./Cal/AliTRDCalPad.h"
  85 #include "./Cal/AliTRDCalSingleChamberStatus.h"
  86
  87 #ifdef ALI_DATE
  88 #include "event.h"
  89 #endif
  90
  91 ClassImp(AliTRDCalibPadStatus) /*FOLD00*/
  92
  93 //_____________________________________________________________________
  94 AliTRDCalibPadStatus::AliTRDCalibPadStatus() : /*FOLD00*/
  95   TObject(),
  96   fGeo(0),
  97   fAdcMin(0),
  98   fAdcMax(21),
  99   fDetector(-1),
 100   fNumberOfTimeBins(0),
 101   fCalRocArrayMean(540),
 102   fCalRocArrayRMS(540),
 103   fCalRocArrayMeand(540),
 104   fCalRocArrayRMSd(540),
 105   fHistoArray(540)
 106 {
 107     //
 108     // default constructor
 109     //
 110
 111   fGeo = new AliTRDgeometry();
 112
 113 }
 114
 115 //_____________________________________________________________________
 116 AliTRDCalibPadStatus::AliTRDCalibPadStatus(const AliTRDCalibPadStatus &ped) : /*FOLD00*/
 117   TObject(ped),
 118   fGeo(0),
 119   fAdcMin(ped.GetAdcMin()),
 120   fAdcMax(ped.GetAdcMax()),
 121   fDetector(ped.fDetector),
 122   fNumberOfTimeBins(ped.fNumberOfTimeBins),
 123   fCalRocArrayMean(540),
 124   fCalRocArrayRMS(540),
 125   fCalRocArrayMeand(540),
 126   fCalRocArrayRMSd(540),
 127   fHistoArray(540)
 128 {
 129     //
 130     // copy constructor
 131     //
 132     for (Int_t idet = 0; idet < 540; idet++){
 133         const AliTRDCalROC *calRocMean  = (AliTRDCalROC*)ped.fCalRocArrayMean.UncheckedAt(idet);
 134         const AliTRDCalROC *calRocRMS   = (AliTRDCalROC*)ped.fCalRocArrayRMS.UncheckedAt(idet);
 135         const AliTRDCalROC *calRocMeand = (AliTRDCalROC*)ped.fCalRocArrayMeand.UncheckedAt(idet);
 136         const AliTRDCalROC *calRocRMSd  = (AliTRDCalROC*)ped.fCalRocArrayRMSd.UncheckedAt(idet);
 137         const TH2F         *hped        = (TH2F*)ped.fHistoArray.UncheckedAt(idet);
 138
 139         if ( calRocMean != 0x0 ) fCalRocArrayMean.AddAt(new AliTRDCalROC(*calRocMean), idet);
 140         if ( calRocRMS != 0x0 )  fCalRocArrayRMS.AddAt(new AliTRDCalROC(*calRocRMS), idet);
 141
 142         if ( calRocMeand != 0x0 ) fCalRocArrayMeand.AddAt(new AliTRDCalROC(*calRocMeand), idet);
 143         if ( calRocRMSd != 0x0 )  fCalRocArrayRMSd.AddAt(new AliTRDCalROC(*calRocRMSd), idet);
 144
 145         if ( hped != 0x0 ){
 146           TH2F *hNew = new TH2F(*hped);
 147           hNew->SetDirectory(0);
 148           fHistoArray.AddAt(hNew,idet);
 149         }
 150
 151     }
 152     if (fGeo) {
 153       delete fGeo;
 154     }
 155     fGeo = new AliTRDgeometry();
 156 }
 157
 158 //_____________________________________________________________________
 159 AliTRDCalibPadStatus& AliTRDCalibPadStatus::operator = (const  AliTRDCalibPadStatus &source)
 160 {
 161   //
 162   // assignment operator
 163   //
 164   if (&source == this) return *this;
 165   new (this) AliTRDCalibPadStatus(source);
 166
 167   return *this;
 168 }
 169
 170 //_____________________________________________________________________
 171 AliTRDCalibPadStatus::~AliTRDCalibPadStatus() /*FOLD00*/
 172 {
 173   //
 174   // destructor
 175   //
 176   if (fGeo) {
 177     delete fGeo;
 178   }
 179 }
 180
 181 //_____________________________________________________________________
 182 Int_t AliTRDCalibPadStatus::UpdateHisto(const Int_t icdet, /*FOLD00*/
 183                                         const Int_t icRow,
 184                                         const Int_t icCol,
 185                                         const Int_t csignal,
 186                                         const Int_t crowMax,
 187                                         const Int_t ccold,
 188                                         const Int_t icMcm)
 189 {
 190   //
 191   // Signal filling methode
 192   //
 193   Int_t nbchannel = icRow+icCol*crowMax;
 194
 195   // now the case of double read channel
 196   if(ccold > 0){
 197     nbchannel = (((ccold-1)*8+ icMcm)*crowMax+icRow)+144*crowMax;
 198     //printf("nbchannel %d, ccold %d, icMcm %d, crowMax %d, icRow %d\n",nbchannel,ccold,icMcm,crowMax,icRow);
 199   }
 200
 201   // fast filling methode.
 202   // Attention: the entry counter of the histogram is not increased
 203   //            this means that e.g. the colz draw option gives an empty plot
 204   Int_t bin = 0;
 205   if ( !(((Int_t)csignal>=fAdcMax ) || ((Int_t)csignal<fAdcMin)) )
 206     bin = (nbchannel+1)*(fAdcMax-fAdcMin+2)+((Int_t)csignal-fAdcMin+1);
 207
 208   //GetHisto(icdet,kTRUE)->Fill(csignal,nbchannel);
 209
 210   GetHisto(icdet,kTRUE)->GetArray()[bin]++;
 211
 212   return 0;
 213 }
 214 //_____________________________________________________________________
 215 Int_t AliTRDCalibPadStatus::ProcessEvent(AliTRDrawStreamBase *rawStream, Bool_t nocheck)
 216 {
 217   //
 218   // Event Processing loop - AliTRDRawStreamCosmic
 219   // 0 time bin problem or zero suppression
 220   // 1 no input
 221   // 2 input
 222   //
 223
 224   Int_t withInput = 1;
 225
 226   rawStream->SetSharedPadReadout(kTRUE);
 227
 228   if(!nocheck) {
 229     while (rawStream->Next()) {
 230       Int_t rawversion = rawStream->GetRawVersion();                     //  current raw version
 231       //if(!rawStream->IsDataZeroSuppressed()) {
 232       if(rawversion > 2) {
 233         AliInfo(Form("this is not no-zero-suppressed data, the version is %d",rawversion));
 234         return 0;
 235       }
 236       Int_t idetector  = rawStream->GetDet();                            //  current detector
 237       Int_t iRow       = rawStream->GetRow();                            //  current row
 238       Int_t iRowMax    = rawStream->GetMaxRow();                         //  current rowmax
 239       Int_t iCol       = rawStream->GetCol();                            //  current col
 240
 241
 242       Int_t iADC       = 21-rawStream->GetADC();                         //  current ADC
 243       Int_t col        = 0;
 244       if(iADC == 1) col = 1;
 245       else {
 246         col = TMath::Max(0,(Int_t)(iADC-19));
 247         if(col > 0) col++;
 248       }
 249       Int_t mcm        = (Int_t)(iCol/18);                               //  current group of 18 col pads
 250       if(col > 1) mcm -= 1;
 251       if(col ==1) mcm += 1;
 252
 253       //Bool_t shared = rawStream->IsCurrentPadShared();
 254       //printf("ADC %d, iCol %d, col %d, mcm %d, shared %d\n",iADC,iCol,col,mcm,(Int_t)shared);
 255
 256       Int_t *signal    = rawStream->GetSignals();                        //  current ADC signal
 257       Int_t nbtimebin  = rawStream->GetNumberOfTimeBins();               //  number of time bins read from data
 258
 259       if((fDetector != -1) && (nbtimebin != fNumberOfTimeBins)) {
 260         AliInfo(Form("the number of time bins is %d, is different from the previous one %d",nbtimebin,fNumberOfTimeBins));
 261         return 0;
 262       }
 263       fNumberOfTimeBins = nbtimebin;
 264
 265       for(Int_t k = 0; k < fNumberOfTimeBins; k++){
 266         if(signal[k]>0) UpdateHisto(idetector,iRow,iCol,signal[k],iRowMax,col,mcm);
 267       }
 268
 269       withInput = 2;
 270     }
 271   }
 272   else {
 273     while (rawStream->Next()) {
 274       Int_t idetector  = rawStream->GetDet();                            //  current detector
 275       Int_t iRow       = rawStream->GetRow();                            //  current row
 276       Int_t iRowMax    = rawStream->GetMaxRow();                         //  current rowmax
 277       Int_t iCol       = rawStream->GetCol();                            //  current col
 278
 279
 280       Int_t iADC       = 21-rawStream->GetADC();                            //  current ADC
 281       Int_t col        = 0;
 282       if(iADC == 1) col = 1;
 283       else {
 284         col = TMath::Max(0,(Int_t)(iADC-19));
 285         if(col > 0) col++;
 286       }
 287       Int_t mcm        = (Int_t)(iCol/18);                               //  current group of 18 col pads
 288       if(col > 1) mcm -= 1;
 289       if(col ==1) mcm += 1;
 290
 291       Int_t *signal    = rawStream->GetSignals();                        //  current ADC signal
 292       Int_t nbtimebin = rawStream->GetNumberOfTimeBins();               //  number of time bins read from data
 293
 294
 295       //printf("det %d, row %d, signal[0] %d, signal[1] %d, signal [2] %d\n", idetector, iRow, signal[0], signal[1], signal[2]);
 296
 297       for(Int_t k = 0; k < nbtimebin; k++){
 298         if(signal[k]>0) {
 299           UpdateHisto(idetector,iRow,iCol,signal[k],iRowMax,col,mcm);
 300           //printf("Update with det %d, row %d, col %d, signal %d, rowmax %d, col %d, mcm %d\n",idetector,iRow,iCol,signal[n],iRowMax,col,mcm);
 301         }
 302       }
 303
 304       withInput = 2;
 305     }
 306   }
 307
 308   return withInput;
 309 }
 310
 311 //_____________________________________________________________________
 312 Int_t AliTRDCalibPadStatus::ProcessEvent(AliRawReader *rawReader, Bool_t nocheck)
 313 {
 314   //
 315   //  Event processing loop - AliRawReader
 316   //
 317
 318   Int_t result;
 319
 320   rawReader->Select("TRD");
 321
 322   AliTRDrawStreamBase *pstream = AliTRDrawStreamBase::GetRawStream(rawReader);
 323
 324   result = ProcessEvent(pstream, nocheck);
 325
 326   delete pstream;
 327
 328   return result;
 329 }
 330
 331 //_________________________________________________________________________
 332 Int_t AliTRDCalibPadStatus::ProcessEvent(
 333 #ifdef ALI_DATE
 334                                           eventHeaderStruct *event,
 335                                           Bool_t nocheck
 336 #else
 337                                           eventHeaderStruct* /*event*/,
 338                                           Bool_t /*nocheck*/
 339
 340 #endif
 341                                           )
 342 {
 343   //
 344   //  process date event
 345   //
 346 #ifdef ALI_DATE
 347     AliRawReader *rawReader = new AliRawReaderDate((void*)event);
 348     Bool_t result=ProcessEvent(rawReader, nocheck);
 349     delete rawReader;
 350     return result;
 351 #else
 352     Fatal("AliTRDCalibPadStatus", "this class was compiled without DATE");
 353     return 0;
 354 #endif
 355
 356 }
 357
 358 //_____________________________________________________________________
 359 Bool_t AliTRDCalibPadStatus::TestEventHisto(Int_t nevent, Int_t sm, Int_t ch) /*FOLD00*/
 360 {
 361   //
 362   //  Test event loop
 363   // fill one oroc and one iroc with random gaus
 364   //
 365
 366   gRandom->SetSeed(0);
 367
 368     for (Int_t ism=sm; ism<sm+1; ism++){
 369         for (Int_t ich=ch; ich < ch+1; ich++){
 370             for (Int_t ipl=0; ipl < 6; ipl++){
 371               for(Int_t irow = 0; irow < fGeo->GetRowMax(ipl,ich,ism); irow++){
 372                 for(Int_t icol = 0; icol < fGeo->GetColMax(ipl); icol++){
 373                   for (Int_t iTimeBin=0; iTimeBin<(30*nevent); iTimeBin++){
 374                     Int_t signal=TMath::Nint(gRandom->Gaus(10,1.5));
 375                     if ( signal>0 )UpdateHisto((ipl+ich*6+ism*6*5),irow,icol,signal,fGeo->GetRowMax(ipl,ich,ism),0,0);
 376                   }
 377                 }
 378               }
 379             }
 380         }
 381     }
 382     return kTRUE;
 383 }
 384
 385 //_____________________________________________________________________
 386 TH2F* AliTRDCalibPadStatus::GetHisto(Int_t det, TObjArray *arr, /*FOLD00*/
 387                                   Int_t nbinsY, Float_t ymin, Float_t ymax,
 388                                   Char_t *type, Bool_t force)
 389 {
 390     //
 391     // return pointer to histogram
 392     // if force is true create a new histogram if it doesn't exist allready
 393     //
 394     if ( !force || arr->UncheckedAt(det) )
 395         return (TH2F*)arr->UncheckedAt(det);
 396
 397     // if we are forced and histogram doesn't yes exist create it
 398     Char_t name[255], title[255];
 399
 400     sprintf(name,"hCalib%s%.2d",type,det);
 401     sprintf(title,"%s calibration histogram detector %.2d;ADC channel;Channel (pad)",type,det);
 402
 403
 404     Int_t nbchannels = fGeo->GetRowMax(GetPlane(det),GetChamber(det),GetSector(det))*fGeo->GetColMax(GetPlane(det));
 405
 406     // we will add 3*8*rowMax channels at the end for the double counted
 407     nbchannels += 3*8*(fGeo->GetRowMax(GetPlane(det),GetChamber(det),GetSector(det)));
 408
 409
 410     // new histogram with calib information. One value for each pad!
 411     TH2F* hist = new TH2F(name,title,
 412                           nbinsY, ymin, ymax,
 413                           nbchannels,0,nbchannels
 414                           );
 415     hist->SetDirectory(0);
 416     arr->AddAt(hist,det);
 417     return hist;
 418 }
 419
 420 //_____________________________________________________________________
 421 TH2F* AliTRDCalibPadStatus::GetHisto(Int_t det, Bool_t force) /*FOLD00*/
 422 {
 423     //
 424     // return pointer to histogram
 425     // if force is true create a new histogram if it doesn't exist allready
 426     //
 427     TObjArray *arr = &fHistoArray;
 428     return GetHisto(det, arr, fAdcMax-fAdcMin, fAdcMin-0.5, fAdcMax-0.5, "Pedestal", force);
 429 }
 430
 431 //_____________________________________________________________________
 432 AliTRDCalROC* AliTRDCalibPadStatus::GetCalRoc(Int_t det, TObjArray* arr, Bool_t force) /*FOLD00*/
 433 {
 434     //
 435     // return pointer to ROC Calibration
 436     // if force is true create a new AliTRDCalROC if it doesn't exist allready
 437     //
 438     if ( !force || arr->UncheckedAt(det) )
 439         return (AliTRDCalROC*)arr->UncheckedAt(det);
 440
 441     // if we are forced and histogram doesn't yes exist create it
 442
 443     // new AliTRDCalROC. One value for each pad!
 444     AliTRDCalROC *croc = new AliTRDCalROC(GetPlane(det),GetChamber(det));
 445     arr->AddAt(croc,det);
 446     return croc;
 447 }
 448 //_____________________________________________________________________
 449 AliTRDCalROC* AliTRDCalibPadStatus::GetCalRocMean(Int_t det, Bool_t force) /*FOLD00*/
 450 {
 451     //
 452     // return pointer to Carge ROC Calibration
 453     // if force is true create a new histogram if it doesn't exist allready
 454     //
 455     TObjArray *arr = &fCalRocArrayMean;
 456     return GetCalRoc(det, arr, force);
 457 }
 458
 459 //_____________________________________________________________________
 460 AliTRDCalROC* AliTRDCalibPadStatus::GetCalRocRMS(Int_t det, Bool_t force) /*FOLD00*/
 461 {
 462     //
 463     // return pointer to Carge ROC Calibration
 464     // if force is true create a new histogram if it doesn't exist allready
 465     //
 466     TObjArray *arr = &fCalRocArrayRMS;
 467     return GetCalRoc(det, arr, force);
 468 }
 469 //_____________________________________________________________________
 470 AliTRDCalROC* AliTRDCalibPadStatus::GetCalRocMeand(Int_t det, Bool_t force) /*FOLD00*/
 471 {
 472     //
 473     // return pointer to Carge ROC Calibration
 474     // if force is true create a new histogram if it doesn't exist allready
 475     //
 476     TObjArray *arr = &fCalRocArrayMeand;
 477     return GetCalRoc(det, arr, force);
 478 }
 479
 480 //_____________________________________________________________________
 481 AliTRDCalROC* AliTRDCalibPadStatus::GetCalRocRMSd(Int_t det, Bool_t force) /*FOLD00*/
 482 {
 483     //
 484     // return pointer to Carge ROC Calibration
 485     // if force is true create a new histogram if it doesn't exist allready
 486     //
 487     TObjArray *arr = &fCalRocArrayRMSd;
 488     return GetCalRoc(det, arr, force);
 489 }
 490
 491 //_____________________________________________________________________
 492 void AliTRDCalibPadStatus::AnalyseHisto() /*FOLD00*/
 493 {
 494     //
 495     //  Calculate calibration constants
 496     //
 497
 498     Int_t nbinsAdc = fAdcMax-fAdcMin;
 499
 500     TVectorD param(4);
 501     TMatrixD dummy(3,3);
 502
 503     Float_t *arrayHP=0;
 504
 505
 506     for (Int_t idet=0; idet<540; idet++){
 507         TH2F *hP = GetHisto(idet);
 508         if ( !hP ) {
 509           continue;
 510         }
 511
 512         //printf("Entries for %d\n",idet);
 513
 514         AliTRDCalROC *rocMean     = GetCalRocMean(idet,kTRUE);
 515         AliTRDCalROC *rocRMS      = GetCalRocRMS(idet,kTRUE);
 516
 517         arrayHP = hP->GetArray();
 518         Int_t nChannels = rocMean->GetNchannels();
 519
 520         for (Int_t iChannel=0; iChannel<nChannels; iChannel++){
 521             Int_t offset = (nbinsAdc+2)*(iChannel+1)+1;
 522             Double_t ret = AliMathBase::FitGaus(arrayHP+offset,nbinsAdc,fAdcMin-0.5,fAdcMax-0.5,&param,&dummy);
 523             // if the fitting failed set noise and pedestal to 0
 524             if ((ret==-4) || (ret==-1) || (ret==-2)) {
 525                 param[1]=0.0;
 526                 param[2]=0.0;
 527             }
 528             if((param[1]/10.0) > 65534.0) param[1] = 0.0;
 529             if((param[2]/10.0) > 65534.0) param[2] = 0.0;
 530             rocMean->SetValue(iChannel,param[1]/10.0);
 531             rocRMS->SetValue(iChannel,param[2]/10.0);
 532         }
 533
 534         // here we analyse doubled read channels
 535
 536         AliTRDCalROC *rocMeand     = GetCalRocMeand(idet,kTRUE);
 537         AliTRDCalROC *rocRMSd      = GetCalRocRMSd(idet,kTRUE);
 538
 539         Int_t nrows = rocMeand->GetNrows();
 540         Int_t shift = 144*nrows;
 541         Int_t total = shift+3*8*nrows;
 542
 543         for (Int_t iChannel=shift; iChannel<total; iChannel++){
 544             Int_t offset = (nbinsAdc+2)*(iChannel+1)+1;
 545             Double_t ret = AliMathBase::FitGaus(arrayHP+offset,nbinsAdc,fAdcMin-0.5,fAdcMax-0.5,&param,&dummy);
 546             // if the fitting failed set noise and pedestal to 0
 547             if ((ret==-4) || (ret==-1) || (ret==-2)) {
 548                 param[1]=0.0;
 549                 param[2]=0.0;
 550             }
 551             if((param[1]/10.0) > 65534.0) param[1] = 0.0;
 552             if((param[2]/10.0) > 65534.0) param[2] = 0.0;
 553
 554             // here we have to recalculate backward
 555             Int_t nb   = iChannel-shift;
 556             Int_t row  = nb%nrows;
 557             Int_t j    = (Int_t)(nb/nrows);
 558             Int_t imcm = j%8;
 559             Int_t icol = (Int_t)(j/8);
 560
 561             Int_t finalcol = 18*imcm;
 562             if(icol > 0) icol += 17;
 563             else icol = -1;
 564             finalcol += icol;
 565
 566             Int_t channel = row+finalcol*nrows;
 567
 568             //printf("iChannel %d, nrows %d, finalcol %d, row %d, channel %d\n",iChannel,nrows,finalcol,row,channel);
 569             if((finalcol < 0) || (finalcol >= 144)) continue;
 570
 571             rocMeand->SetValue(channel,param[1]/10.0);
 572             rocRMSd->SetValue(channel,param[2]/10.0);
 573         }
 574
 575     }
 576
 577 }
 578
 579 //_______________________________________________________________________________________
 580 AliTRDCalPadStatus* AliTRDCalibPadStatus::CreateCalPadStatus()
 581 {
 582   //
 583   // Create Pad Status out of Mean and RMS values
 584   //
 585
 586   AliTRDCalPadStatus* obj = new AliTRDCalPadStatus("padstatus", "padstatus");
 587
 588   for (Int_t idet=0; idet<540; ++idet)
 589     {
 590       AliTRDCalSingleChamberStatus *calROC = obj->GetCalROC(idet);
 591
 592       //Take the stuff
 593       AliTRDCalROC *calRocMean    = ((AliTRDCalROC *)GetCalRocMean(idet));
 594       AliTRDCalROC *calRocRMS     = ((AliTRDCalROC *)GetCalRocRMS(idet));
 595
 596       //Take the stuff second chance
 597       AliTRDCalROC *calRocMeand    = ((AliTRDCalROC *)GetCalRocMeand(idet));
 598       AliTRDCalROC *calRocRMSd     = ((AliTRDCalROC *)GetCalRocRMSd(idet));
 599
 600       if ( !calRocMean ) {
 601         for(Int_t k = 0; k < calROC->GetNchannels(); k++){
 602           calROC->SetStatus(k,AliTRDCalPadStatus::kMasked);
 603         }
 604         continue;
 605       }
 606
 607       //Range
 608       Int_t channels = calROC->GetNchannels();
 609
 610       Double_t rmsmean       = calRocMean->GetRMS()*10.0;
 611       Double_t meanmean      = calRocMean->GetMean()*10.0;
 612       Double_t meansquares   = calRocRMS->GetMean()*10.0;
 613
 614       for(Int_t ich = 0; ich < channels; ich++){
 615
 616         Float_t mean     = calRocMean->GetValue(ich)*10.0;
 617         Float_t rms      = calRocRMS->GetValue(ich)*10.0;
 618
 619         if((rms <= 0.0001) || (TMath::Abs(mean-meanmean)>(5*rmsmean)) || (TMath::Abs(rms)>(5.0*TMath::Abs(meansquares)))) {
 620           // look at second chance
 621           Float_t meand     = calRocMeand->GetValue(ich)*10.0;
 622           Float_t rmsd      = calRocRMSd->GetValue(ich)*10.0;
 623
 624           if((rmsd <= 0.0001) || (TMath::Abs(meand-meanmean)>(5*rmsmean)) || (TMath::Abs(rmsd)>(5.0*TMath::Abs(meansquares)))) {
 625             calROC->SetStatus(ich, AliTRDCalPadStatus::kMasked);
 626           }
 627           else calROC->SetStatus(ich, AliTRDCalPadStatus::kReadSecond);
 628         }
 629
 630       }
 631     }
 632
 633   return obj;
 634
 635 }
 636 //_______________________________________________________________________________________
 637 AliTRDCalPad* AliTRDCalibPadStatus::CreateCalPad()
 638 {
 639   //
 640   // Create Pad Noise out of RMS values
 641   //
 642
 643   AliTRDCalPad* obj = new AliTRDCalPad("PadNoise", "PadNoise");
 644
 645
 646   for (Int_t det=0; det<AliTRDgeometry::kNdet; ++det)  {
 647
 648     AliTRDCalROC *calROC22 = obj->GetCalROC(det);
 649
 650     AliTRDCalROC *calRocRMS     = ((AliTRDCalROC *)GetCalRocRMS(det,kTRUE));
 651
 652     for(Int_t k = 0; k < calROC22->GetNchannels(); k++){
 653       calROC22->SetValue(k,calRocRMS->GetValue(k));
 654     }
 655
 656   }
 657
 658   return obj;
 659
 660 }
 661
 662 //_______________________________________________________________________________________
 663 AliTRDCalDet* AliTRDCalibPadStatus::CreateCalDet() const
 664 {
 665   //
 666   // Create Det Noise correction factor
 667   //
 668
 669   AliTRDCalDet* obj = new AliTRDCalDet("DetNoise", "DetNoise (correction factor)");
 670
 671   for(Int_t l = 0; l < 540; l++){
 672     obj->SetValue(l,10.0);
 673   }
 674
 675   return obj;
 676
 677 }
 678
 679 //_____________________________________________________________________
 680 void AliTRDCalibPadStatus::DumpToFile(const Char_t *filename, const Char_t *dir, Bool_t append) /*FOLD00*/
 681 {
 682     //
 683     //  Write class to file
 684     //
 685
 686     TString sDir(dir);
 687     TString option;
 688
 689     if ( append )
 690         option = "update";
 691     else
 692         option = "recreate";
 693
 694     TDirectory *backup = gDirectory;
 695     TFile f(filename,option.Data());
 696     f.cd();
 697     if ( !sDir.IsNull() ){
 698         f.mkdir(sDir.Data());
 699         f.cd(sDir);
 700     }
 701     this->Write();
 702     f.Close();
 703
 704     if ( backup ) backup->cd();
 705 }
 706
 707 //_____________________________________________________________________
 708 void AliTRDCalibPadStatus::SetCalRocMean(AliTRDCalROC *mean, Int_t det) /*FOLD00*/
 709 {
 710     //
 711     //  Put the AliTRDCalROC in the array fCalRocArrayMean
 712     //
 713
 714
 715   AliTRDCalROC *rocMean = GetCalRocMean(det,kTRUE);
 716
 717   Int_t nChannels = rocMean->GetNchannels();
 718
 719   for (Int_t iChannel=0; iChannel<nChannels; iChannel++){
 720
 721     rocMean->SetValue(iChannel,mean->GetValue(iChannel));
 722
 723   }
 724
 725 }
 726
 727 //_____________________________________________________________________
 728 void AliTRDCalibPadStatus::SetCalRocRMS(AliTRDCalROC *rms, Int_t det) /*FOLD00*/
 729 {
 730     //
 731     //  Put the AliTRDCalROC in the array fCalRocArrayRMS
 732     //
 733
 734
 735   AliTRDCalROC *rocRms = GetCalRocRMS(det,kTRUE);
 736
 737   Int_t nChannels = rocRms->GetNchannels();
 738
 739   for (Int_t iChannel=0; iChannel<nChannels; iChannel++){
 740
 741     rocRms->SetValue(iChannel,rms->GetValue(iChannel));
 742
 743   }
 744
 745 }
 746 //_____________________________________________________________________
 747 void AliTRDCalibPadStatus::SetCalRocMeand(AliTRDCalROC *mean, Int_t det) /*FOLD00*/
 748 {
 749     //
 750     //  Put the AliTRDCalROC in the array fCalRocArrayMean
 751     //
 752
 753
 754   AliTRDCalROC *rocMean = GetCalRocMeand(det,kTRUE);
 755
 756   Int_t nChannels = rocMean->GetNchannels();
 757
 758   for (Int_t iChannel=0; iChannel<nChannels; iChannel++){
 759
 760     rocMean->SetValue(iChannel,mean->GetValue(iChannel));
 761
 762   }
 763
 764 }
 765
 766 //_____________________________________________________________________
 767 void AliTRDCalibPadStatus::SetCalRocRMSd(AliTRDCalROC *rms, Int_t det) /*FOLD00*/
 768 {
 769     //
 770     //  Put the AliTRDCalROC in the array fCalRocArrayRMS
 771     //
 772
 773
 774   AliTRDCalROC *rocRms = GetCalRocRMSd(det,kTRUE);
 775
 776   Int_t nChannels = rocRms->GetNchannels();
 777
 778   for (Int_t iChannel=0; iChannel<nChannels; iChannel++){
 779
 780     rocRms->SetValue(iChannel,rms->GetValue(iChannel));
 781
 782   }
 783
 784 }
 785 //_____________________________________________________________________________
 786 Int_t AliTRDCalibPadStatus::GetPlane(Int_t d) const
 787 {
 788   //
 789   // Reconstruct the plane number from the detector number
 790   //
 791
 792   return ((Int_t) (d % 6));
 793
 794 }
 795
 796 //_____________________________________________________________________________
 797 Int_t AliTRDCalibPadStatus::GetChamber(Int_t d) const
 798 {
 799   //
 800   // Reconstruct the chamber number from the detector number
 801   //
 802
 803   return ((Int_t) (d % 30) / 6);
 804
 805 }
 806
 807 //_____________________________________________________________________________
 808 Int_t AliTRDCalibPadStatus::GetSector(Int_t d) const
 809 {
 810   //
 811   // Reconstruct the sector number from the detector number
 812   //
 813
 814   return ((Int_t) (d / 30));
 815
 816 }
 817
 818