#include <TClass.h>
#include <TFile.h>
+#include <TKey.h>
#include <TMethodCall.h>
#include <TChain.h>
#include <TSystem.h>
#include <TROOT.h>
+#include <TCanvas.h>
+#include "AliAnalysisSelector.h"
+#include "AliAnalysisGrid.h"
#include "AliAnalysisTask.h"
#include "AliAnalysisDataContainer.h"
#include "AliAnalysisDataSlot.h"
-#include "AliVirtualEventHandler.h"
+#include "AliVEventHandler.h"
+#include "AliVEventPool.h"
+#include "AliSysInfo.h"
#include "AliAnalysisManager.h"
ClassImp(AliAnalysisManager)
AliAnalysisManager *AliAnalysisManager::fgAnalysisManager = NULL;
-//______________________________________________________________________________
-AliAnalysisManager::AliAnalysisManager()
- :TNamed(),
- fTree(NULL),
- fOutputEventHandler(NULL),
- fMCtruthEventHandler(NULL),
- fCurrentEntry(-1),
- fMode(kLocalAnalysis),
- fInitOK(kFALSE),
- fDebug(0),
- fTasks(NULL),
- fTopTasks(NULL),
- fZombies(NULL),
- fContainers(NULL),
- fInputs(NULL),
- fOutputs(NULL)
-{
-// Dummy constructor.
- fgAnalysisManager = this;
- SetEventLoop(kTRUE);
-}
-
//______________________________________________________________________________
AliAnalysisManager::AliAnalysisManager(const char *name, const char *title)
:TNamed(name,title),
fTree(NULL),
- fOutputEventHandler(NULL),
- fMCtruthEventHandler(NULL),
+ fInputEventHandler(NULL),
+ fOutputEventHandler(NULL),
+ fMCtruthEventHandler(NULL),
+ fEventPool(NULL),
fCurrentEntry(-1),
+ fNSysInfo(0),
fMode(kLocalAnalysis),
fInitOK(kFALSE),
fDebug(0),
+ fSpecialOutputLocation(""),
fTasks(NULL),
fTopTasks(NULL),
fZombies(NULL),
fContainers(NULL),
fInputs(NULL),
- fOutputs(NULL)
+ fOutputs(NULL),
+ fCommonInput(NULL),
+ fCommonOutput(NULL),
+ fSelector(NULL),
+ fGridHandler(NULL),
+ fExtraFiles("")
{
// Default constructor.
fgAnalysisManager = this;
AliAnalysisManager::AliAnalysisManager(const AliAnalysisManager& other)
:TNamed(other),
fTree(NULL),
- fOutputEventHandler(NULL),
- fMCtruthEventHandler(NULL),
+ fInputEventHandler(NULL),
+ fOutputEventHandler(NULL),
+ fMCtruthEventHandler(NULL),
+ fEventPool(NULL),
fCurrentEntry(-1),
+ fNSysInfo(0),
fMode(other.fMode),
fInitOK(other.fInitOK),
fDebug(other.fDebug),
+ fSpecialOutputLocation(""),
fTasks(NULL),
fTopTasks(NULL),
fZombies(NULL),
fContainers(NULL),
fInputs(NULL),
- fOutputs(NULL)
+ fOutputs(NULL),
+ fCommonInput(NULL),
+ fCommonOutput(NULL),
+ fSelector(NULL),
+ fGridHandler(NULL),
+ fExtraFiles()
{
// Copy constructor.
fTasks = new TObjArray(*other.fTasks);
// Assignment
if (&other != this) {
TNamed::operator=(other);
+ fInputEventHandler = other.fInputEventHandler;
fOutputEventHandler = other.fOutputEventHandler;
fMCtruthEventHandler = other.fMCtruthEventHandler;
+ fEventPool = other.fEventPool;
fTree = NULL;
fCurrentEntry = -1;
+ fNSysInfo = other.fNSysInfo;
fMode = other.fMode;
fInitOK = other.fInitOK;
fDebug = other.fDebug;
fContainers = new TObjArray(*other.fContainers);
fInputs = new TObjArray(*other.fInputs);
fOutputs = new TObjArray(*other.fOutputs);
+ fCommonInput = NULL;
+ fCommonOutput = NULL;
+ fSelector = NULL;
+ fGridHandler = NULL;
+ fExtraFiles = other.fExtraFiles;
fgAnalysisManager = this;
}
return *this;
if (fContainers) {fContainers->Delete(); delete fContainers;}
if (fInputs) delete fInputs;
if (fOutputs) delete fOutputs;
+ if (fGridHandler) delete fGridHandler;
if (fgAnalysisManager==this) fgAnalysisManager = NULL;
}
Int_t AliAnalysisManager::GetEntry(Long64_t entry, Int_t getall)
{
// Read one entry of the tree or a whole branch.
- if (fDebug > 1) {
- cout << "== AliAnalysisManager::GetEntry()" << endl;
- }
+ if (fDebug > 0) Printf("== AliAnalysisManager::GetEntry(%lld)", entry);
fCurrentEntry = entry;
return fTree ? fTree->GetTree()->GetEntry(entry, getall) : 0;
}
//______________________________________________________________________________
-void AliAnalysisManager::Init(TTree *tree)
+Bool_t AliAnalysisManager::Init(TTree *tree)
{
// The Init() function is called when the selector needs to initialize
// a new tree or chain. Typically here the branch addresses of the tree
// will be set. It is normaly not necessary to make changes to the
// generated code, but the routine can be extended by the user if needed.
// Init() will be called many times when running with PROOF.
- if (!tree) return;
- if (fDebug > 1) {
- printf("->AliAnalysisManager::Init(%s)\n", tree->GetName());
+ Bool_t init = kFALSE;
+ if (!tree) return kFALSE; // Should not happen - protected in selector caller
+ if (fDebug > 0) {
+ Printf("->AliAnalysisManager::Init(%s)", tree->GetName());
+ }
+ // Call InitTree of EventHandler
+ if (fOutputEventHandler) {
+ if (fMode == kProofAnalysis) {
+ init = fOutputEventHandler->Init(0x0, "proof");
+ } else {
+ init = fOutputEventHandler->Init(0x0, "local");
+ }
+ if (!init) {
+ Error("Init", "Output event handler failed to initialize");
+ return kFALSE;
+ }
+ }
+
+ if (fInputEventHandler) {
+ if (fMode == kProofAnalysis) {
+ init = fInputEventHandler->Init(tree, "proof");
+ } else {
+ init = fInputEventHandler->Init(tree, "local");
+ }
+ if (!init) {
+ Error("Init", "Input event handler failed to initialize tree");
+ return kFALSE;
+ }
+ } else {
+ // If no input event handler we need to get the tree once
+ // for the chain
+ if(!tree->GetTree()) {
+ Long64_t readEntry = tree->LoadTree(0);
+ if (readEntry == -2) {
+ Error("Init", "Input tree has no entry. Aborting");
+ return kFALSE;
+ }
+ }
+ }
+
+ if (fMCtruthEventHandler) {
+ if (fMode == kProofAnalysis) {
+ init = fMCtruthEventHandler->Init(0x0, "proof");
+ } else {
+ init = fMCtruthEventHandler->Init(0x0, "local");
+ }
+ if (!init) {
+ Error("Init", "MC event handler failed to initialize");
+ return kFALSE;
+ }
}
+
if (!fInitOK) InitAnalysis();
- if (!fInitOK) return;
+ if (!fInitOK) return kFALSE;
fTree = tree;
- AliAnalysisDataContainer *top = (AliAnalysisDataContainer*)fInputs->At(0);
+ AliAnalysisDataContainer *top = fCommonInput;
+ if (!top) top = (AliAnalysisDataContainer*)fInputs->At(0);
if (!top) {
- cout<<"Error: No top input container !" <<endl;
- return;
+ Error("Init","No top input container !");
+ return kFALSE;
}
top->SetData(tree);
- if (fDebug > 1) {
- printf("<-AliAnalysisManager::Init(%s)\n", tree->GetName());
+ if (fDebug > 0) {
+ Printf("<-AliAnalysisManager::Init(%s)", tree->GetName());
}
-}
-
-//______________________________________________________________________________
-void AliAnalysisManager::Begin(TTree *tree)
-{
- // The Begin() function is called at the start of the query.
- // When running with PROOF Begin() is only called on the client.
- // The tree argument is deprecated (on PROOF 0 is passed).
- if (fDebug > 1) {
- cout << "AliAnalysisManager::Begin()" << endl;
- }
- Init(tree);
+ return kTRUE;
}
//______________________________________________________________________________
// The SlaveBegin() function is called after the Begin() function.
// When running with PROOF SlaveBegin() is called on each slave server.
// The tree argument is deprecated (on PROOF 0 is passed).
- if (fDebug > 1) {
- cout << "->AliAnalysisManager::SlaveBegin()" << endl;
- }
- // Call InitIO of EventHandler
+ if (fDebug > 0) Printf("->AliAnalysisManager::SlaveBegin()");
+ static Bool_t isCalled = kFALSE;
+ Bool_t init = kFALSE;
+ Bool_t initOK = kTRUE;
+ TString msg;
+ TDirectory *curdir = gDirectory;
+ // Call SlaveBegin only once in case of mixing
+ if (isCalled && fMode==kMixingAnalysis) return;
+ // Call Init of EventHandler
if (fOutputEventHandler) {
- if (fMode == kProofAnalysis) {
- fOutputEventHandler->InitIO("proof");
- } else {
- fOutputEventHandler->InitIO("local");
- }
+ if (fMode == kProofAnalysis) {
+ // Merging AOD's in PROOF via TProofOutputFile
+ if (fDebug > 1) Printf(" Initializing AOD output file %s...", fOutputEventHandler->GetOutputFileName());
+ init = fOutputEventHandler->Init("proof");
+ if (!init) msg = "Failed to initialize output handler on worker";
+ } else {
+ init = fOutputEventHandler->Init("local");
+ if (!init) msg = "Failed to initialize output handler";
+ }
+ initOK &= init;
+ if (!fSelector) Error("SlaveBegin", "Selector not set");
+ else if (!init) {fSelector->Abort(msg); fSelector->SetStatus(-1);}
}
- //
+
+ if (fInputEventHandler) {
+ fInputEventHandler->SetInputTree(tree);
+ if (fMode == kProofAnalysis) {
+ init = fInputEventHandler->Init("proof");
+ if (!init) msg = "Failed to initialize input handler on worker";
+ } else {
+ init = fInputEventHandler->Init("local");
+ if (!init) msg = "Failed to initialize input handler";
+ }
+ initOK &= init;
+ if (!fSelector) Error("SlaveBegin", "Selector not set");
+ else if (!init) {fSelector->Abort(msg); fSelector->SetStatus(-1);}
+ }
+
+ if (fMCtruthEventHandler) {
+ if (fMode == kProofAnalysis) {
+ init = fMCtruthEventHandler->Init("proof");
+ if (!init) msg = "Failed to initialize MC handler on worker";
+ } else {
+ init = fMCtruthEventHandler->Init("local");
+ if (!init) msg = "Failed to initialize MC handler";
+ }
+ initOK &= init;
+ if (!fSelector) Error("SlaveBegin", "Selector not set");
+ else if (!init) {fSelector->Abort(msg); fSelector->SetStatus(-1);}
+ }
+ if (curdir) curdir->cd();
+ isCalled = kTRUE;
+ if (!initOK) return;
TIter next(fTasks);
AliAnalysisTask *task;
// Call CreateOutputObjects for all tasks
while ((task=(AliAnalysisTask*)next())) {
- TDirectory *curdir = gDirectory;
+ curdir = gDirectory;
task->CreateOutputObjects();
if (curdir) curdir->cd();
- }
- if (fMode == kLocalAnalysis) Init(tree);
- if (fDebug > 1) {
- cout << "<-AliAnalysisManager::SlaveBegin()" << endl;
}
+ if (fDebug > 0) Printf("<-AliAnalysisManager::SlaveBegin()");
}
//______________________________________________________________________________
// is started when using PROOF. It is normaly not necessary to make changes
// to the generated code, but the routine can be extended by the
// user if needed. The return value is currently not used.
- if (fTree) {
- TFile *curfile = fTree->GetCurrentFile();
- if (curfile && fDebug>1) printf("AliAnalysisManager::Notify() file: %s\n", curfile->GetName());
- TIter next(fTasks);
- AliAnalysisTask *task;
- // Call Notify for all tasks
- while ((task=(AliAnalysisTask*)next()))
- task->Notify();
-
- // Call Notify of the MC truth handler
- if (fMCtruthEventHandler) {
- TString fileName(curfile->GetName());
- fileName.ReplaceAll("AliESDs.root", "");
- fMCtruthEventHandler->Notify(fileName.Data());
- }
+ if (!fTree) return kFALSE;
+
+ TFile *curfile = fTree->GetCurrentFile();
+ if (!curfile) {
+ Error("Notify","No current file");
+ return kFALSE;
+ }
+
+ if (fDebug > 0) Printf("->AliAnalysisManager::Notify() file: %s", curfile->GetName());
+ TIter next(fTasks);
+ AliAnalysisTask *task;
+ // Call Notify for all tasks
+ while ((task=(AliAnalysisTask*)next()))
+ task->Notify();
+
+ // Call Notify of the event handlers
+ if (fInputEventHandler) {
+ fInputEventHandler->Notify(curfile->GetName());
}
+
+ if (fOutputEventHandler) {
+ fOutputEventHandler->Notify(curfile->GetName());
+ }
+
+ if (fMCtruthEventHandler) {
+ fMCtruthEventHandler->Notify(curfile->GetName());
+ }
+ if (fDebug > 0) Printf("<-AliAnalysisManager::Notify()");
return kTRUE;
}
// The entry is always the local entry number in the current tree.
// Assuming that fChain is the pointer to the TChain being processed,
// use fChain->GetTree()->GetEntry(entry).
- if (fDebug > 1) {
- cout << "->AliAnalysisManager::Process()" << endl;
- }
+ if (fDebug > 0) Printf("->AliAnalysisManager::Process(%lld)", entry);
- if (fOutputEventHandler) fOutputEventHandler ->BeginEvent();
- if (fMCtruthEventHandler) fMCtruthEventHandler->BeginEvent();
+ if (fInputEventHandler) fInputEventHandler ->BeginEvent(entry);
+ if (fOutputEventHandler) fOutputEventHandler ->BeginEvent(entry);
+ if (fMCtruthEventHandler) fMCtruthEventHandler->BeginEvent(entry);
GetEntry(entry);
ExecAnalysis();
- if (fDebug > 1) {
- cout << "<-AliAnalysisManager::Process()" << endl;
- }
+ if (fDebug > 0) Printf("<-AliAnalysisManager::Process()");
return kTRUE;
}
{
// Pack all output data containers in the output list. Called at SlaveTerminate
// stage in PROOF case for each slave.
- if (fDebug > 1) {
- cout << "->AliAnalysisManager::PackOutput()" << endl;
- }
+ if (fDebug > 0) Printf("->AliAnalysisManager::PackOutput()");
if (!target) {
Error("PackOutput", "No target. Aborting.");
return;
}
-
+ if (fInputEventHandler) fInputEventHandler ->Terminate();
if (fOutputEventHandler) fOutputEventHandler ->Terminate();
if (fMCtruthEventHandler) fMCtruthEventHandler->Terminate();
+
+ // Call FinishTaskOutput() for each event loop task (not called for
+ // post-event loop tasks - use Terminate() fo those)
+ TIter nexttask(fTasks);
+ AliAnalysisTask *task;
+ while ((task=(AliAnalysisTask*)nexttask())) {
+ if (!task->IsPostEventLoop()) {
+ if (fDebug > 0) Printf("->FinishTaskOutput: task %s", task->GetName());
+ task->FinishTaskOutput();
+ if (fDebug > 0) Printf("<-FinishTaskOutput: task %s", task->GetName());
+ }
+ }
if (fMode == kProofAnalysis) {
TIter next(fOutputs);
AliAnalysisDataContainer *output;
+ Bool_t isManagedByHandler = kFALSE;
while ((output=(AliAnalysisDataContainer*)next())) {
- if (fDebug > 1) printf(" Packing container %s...\n", output->GetName());
- if (output->GetData()) target->Add(output->ExportData());
+ // Do not consider outputs of post event loop tasks
+ isManagedByHandler = kFALSE;
+ if (output->GetProducer()->IsPostEventLoop()) continue;
+ const char *filename = output->GetFileName();
+ if (!(strcmp(filename, "default")) && fOutputEventHandler) {
+ isManagedByHandler = kTRUE;
+ Printf("#### Handler output. Extra: %s", fExtraFiles.Data());
+ filename = fOutputEventHandler->GetOutputFileName();
+ }
+ // Check if data was posted to this container. If not, issue an error.
+ if (!output->GetData() && !isManagedByHandler) {
+ Error("PackOutput", "No data for output container %s. Forgot to PostData ?", output->GetName());
+ continue;
+ }
+ if (!output->IsSpecialOutput()) {
+ // Normal outputs
+ if (strlen(filename) && !isManagedByHandler) {
+ // File resident outputs
+ TFile *file = output->GetFile();
+ // Backup current folder
+ TDirectory *opwd = gDirectory;
+ // Create file if not existing and register to container.
+ if (file) file->cd();
+ else file = new TFile(filename, "RECREATE");
+ if (file->IsZombie()) {
+ Fatal("PackOutput", "Could not recreate file %s", filename);
+ return;
+ }
+ output->SetFile(file);
+ // Clear file list to release object ownership to user.
+ file->Clear();
+ // Save data to file, then close.
+ if (output->GetData()->InheritsFrom(TCollection::Class())) {
+ // If data is a collection, we set the name of the collection
+ // as the one of the container and we save as a single key.
+ TCollection *coll = (TCollection*)output->GetData();
+ coll->SetName(output->GetName());
+ coll->Write(output->GetName(), TObject::kSingleKey);
+ } else {
+ if (output->GetData()->InheritsFrom(TTree::Class())) {
+ TTree *tree = (TTree*)output->GetData();
+ // tree->SetDirectory(file);
+ tree->AutoSave();
+ } else {
+ output->GetData()->Write();
+ }
+ }
+ if (fDebug > 1) Printf("PackOutput %s: memory merge, file resident output", output->GetName());
+ if (fDebug > 2) {
+ Printf(" file %s listing content:", filename);
+ file->ls();
+ }
+ file->Close();
+ // Restore current directory
+ if (opwd) opwd->cd();
+ } else {
+ // Memory-resident outputs
+ if (fDebug > 1) Printf("PackOutput %s: memory merge memory resident output", filename);
+ }
+ AliAnalysisDataWrapper *wrap = 0;
+ if (isManagedByHandler) {
+ wrap = new AliAnalysisDataWrapper(fOutputEventHandler->GetTree());
+ wrap->SetName(output->GetName());
+ }
+ else wrap =output->ExportData();
+ // Output wrappers must NOT delete data after merging - the user owns them
+ wrap->SetDeleteData(kFALSE);
+ target->Add(wrap);
+ } else {
+ // Special outputs. The file must be opened and connected to the container.
+ TDirectory *opwd = gDirectory;
+ TFile *file = output->GetFile();
+ if (!file) {
+ AliAnalysisTask *producer = output->GetProducer();
+ Error("PackOutput",
+ "File %s for special container %s was NOT opened in %s::CreateOutputObjects !!!",
+ output->GetFileName(), output->GetName(), producer->ClassName());
+ continue;
+ }
+ TString outFilename = file->GetName();
+ if (fDebug > 1) Printf("PackOutput %s: special output", output->GetName());
+ if (isManagedByHandler) {
+ // Terminate IO for files managed by the output handler
+ if (file) file->Write();
+ if (file && fDebug > 2) {
+ Printf(" handled file %s listing content:", file->GetName());
+ file->ls();
+ }
+ fOutputEventHandler->TerminateIO();
+ } else {
+ file->cd();
+ // Release object ownership to users after writing data to file
+ if (output->GetData()->InheritsFrom(TCollection::Class())) {
+ // If data is a collection, we set the name of the collection
+ // as the one of the container and we save as a single key.
+ TCollection *coll = (TCollection*)output->GetData();
+ coll->SetName(output->GetName());
+ coll->Write(output->GetName(), TObject::kSingleKey);
+ } else {
+ if (output->GetData()->InheritsFrom(TTree::Class())) {
+ TTree *tree = (TTree*)output->GetData();
+ tree->SetDirectory(file);
+ tree->AutoSave();
+ } else {
+ output->GetData()->Write();
+ }
+ }
+ file->Clear();
+ if (fDebug > 2) {
+ Printf(" file %s listing content:", output->GetFileName());
+ file->ls();
+ }
+ file->Close();
+ }
+ // Restore current directory
+ if (opwd) opwd->cd();
+ // Check if a special output location was provided or the output files have to be merged
+ if (strlen(fSpecialOutputLocation.Data())) {
+ TString remote = fSpecialOutputLocation;
+ remote += "/";
+ Int_t gid = gROOT->ProcessLine("gProofServ->GetGroupId();");
+ if (remote.BeginsWith("alien://")) {
+ gROOT->ProcessLine("TGrid::Connect(\"alien://pcapiserv01.cern.ch:10000\", gProofServ->GetUser());");
+ remote += outFilename;
+ remote.ReplaceAll(".root", Form("_%d.root", gid));
+ } else {
+ remote += Form("%s_%d_", gSystem->HostName(), gid);
+ remote += outFilename;
+ }
+ if (fDebug > 1)
+ Info("PackOutput", "Output file for container %s to be copied \n at: %s. No merging.",
+ output->GetName(), remote.Data());
+ TFile::Cp ( outFilename.Data(), remote.Data() );
+ // Copy extra outputs
+ if (fExtraFiles.Length() && isManagedByHandler) {
+ TObjArray *arr = fExtraFiles.Tokenize(" ");
+ TObjString *os;
+ TIter nextfilename(arr);
+ while ((os=(TObjString*)nextfilename())) {
+ outFilename = os->GetString();
+ remote = fSpecialOutputLocation;
+ remote += "/";
+ if (remote.BeginsWith("alien://")) {
+ remote += outFilename;
+ remote.ReplaceAll(".root", Form("_%d.root", gid));
+ } else {
+ remote += Form("%s_%d_", gSystem->HostName(), gid);
+ remote += outFilename;
+ }
+ if (fDebug > 1)
+ Info("PackOutput", "Extra AOD file %s to be copied \n at: %s. No merging.",
+ outFilename.Data(), remote.Data());
+ TFile::Cp ( outFilename.Data(), remote.Data() );
+ }
+ delete arr;
+ }
+ } else {
+ // No special location specified-> use TProofOutputFile as merging utility
+ // The file at this output slot must be opened in CreateOutputObjects
+ if (fDebug > 1) Printf(" File for container %s to be merged via file merger...", output->GetName());
+ }
+ }
}
}
- if (fDebug > 1) {
- printf("<-AliAnalysisManager::PackOutput: output list contains %d containers\n", target->GetSize());
- }
+ if (fDebug > 0) Printf("<-AliAnalysisManager::PackOutput: output list contains %d containers", target->GetSize());
}
//______________________________________________________________________________
void AliAnalysisManager::ImportWrappers(TList *source)
{
// Import data in output containers from wrappers coming in source.
- if (fDebug > 1) {
- cout << "->AliAnalysisManager::ImportWrappers()" << endl;
- }
+ if (fDebug > 0) Printf("->AliAnalysisManager::ImportWrappers()");
TIter next(fOutputs);
AliAnalysisDataContainer *cont;
AliAnalysisDataWrapper *wrap;
Int_t icont = 0;
+ Bool_t inGrid = (fMode == kGridAnalysis)?kTRUE:kFALSE;
while ((cont=(AliAnalysisDataContainer*)next())) {
- wrap = (AliAnalysisDataWrapper*)source->FindObject(cont->GetName());
- if (!wrap && fDebug>1) {
- printf("(WW) ImportWrappers: container %s not found in analysis output !\n", cont->GetName());
+ wrap = 0;
+ if (cont->GetProducer()->IsPostEventLoop() && !inGrid) continue;
+ const char *filename = cont->GetFileName();
+ Bool_t isManagedByHandler = kFALSE;
+ if (!(strcmp(filename, "default")) && fOutputEventHandler) {
+ isManagedByHandler = kTRUE;
+ filename = fOutputEventHandler->GetOutputFileName();
+ }
+ if (cont->IsSpecialOutput() || inGrid) {
+ if (strlen(fSpecialOutputLocation.Data())) continue;
+ // Copy merged file from PROOF scratch space.
+ // In case of grid the files are already in the current directory.
+ if (!inGrid) {
+ if (isManagedByHandler && fExtraFiles.Length()) {
+ // Copy extra registered dAOD files.
+ TObjArray *arr = fExtraFiles.Tokenize(" ");
+ TObjString *os;
+ TIter nextfilename(arr);
+ while ((os=(TObjString*)nextfilename())) GetFileFromWrapper(os->GetString(), source);
+ delete arr;
+ }
+ if (!GetFileFromWrapper(filename, source)) continue;
+ }
+ // Normally we should connect data from the copied file to the
+ // corresponding output container, but it is not obvious how to do this
+ // automatically if several objects in file...
+ TFile *f = TFile::Open(filename, "READ");
+ if (!f) {
+ Error("ImportWrappers", "Cannot open file %s in read-only mode", filename);
+ continue;
+ }
+ TObject *obj = 0;
+ // Try to fetch first a list object having the container name.
+ obj = f->Get(cont->GetName());
+ if (!obj) {
+ // Fetch first object from file having the container type.
+ TIter nextkey(f->GetListOfKeys());
+ TKey *key;
+ while ((key=(TKey*)nextkey())) {
+ obj = f->Get(key->GetName());
+ if (obj && obj->IsA()->InheritsFrom(cont->GetType())) break;
+ }
+ }
+ if (!obj) {
+ Error("ImportWrappers", "Could not find object for container %s in file %s", cont->GetName(), filename);
+ continue;
+ }
+ wrap = new AliAnalysisDataWrapper(obj);
+ wrap->SetDeleteData(kFALSE);
+ }
+ if (!wrap) wrap = (AliAnalysisDataWrapper*)source->FindObject(cont->GetName());
+ if (!wrap) {
+ Error("ImportWrappers","Container %s not found in analysis output !", cont->GetName());
continue;
}
icont++;
- if (fDebug > 1) printf(" Importing data for container %s\n", wrap->GetName());
- if (cont->GetFileName()) printf(" -> %s\n", cont->GetFileName());
+ if (fDebug > 1) {
+ Printf(" Importing data for container %s", cont->GetName());
+ if (strlen(filename)) Printf(" -> file %s", filename);
+ else Printf("");
+ }
cont->ImportData(wrap);
}
- if (fDebug > 1) {
- cout << "<-AliAnalysisManager::ImportWrappers(): "<< icont << " containers imported" << endl;
- }
+ if (fDebug > 0) Printf("<-AliAnalysisManager::ImportWrappers(): %d containers imported", icont);
}
//______________________________________________________________________________
void AliAnalysisManager::UnpackOutput(TList *source)
{
- // Called by AliAnalysisSelector::Terminate. Output containers should
- // be in source in the same order as in fOutputs.
- if (fDebug > 1) {
- cout << "->AliAnalysisManager::UnpackOutput()" << endl;
- }
+ // Called by AliAnalysisSelector::Terminate only on the client.
+ if (fDebug > 0) Printf("->AliAnalysisManager::UnpackOutput()");
if (!source) {
Error("UnpackOutput", "No target. Aborting.");
return;
}
- if (fDebug > 1) {
- printf(" Source list contains %d containers\n", source->GetSize());
- }
+ if (fDebug > 1) Printf(" Source list contains %d containers", source->GetSize());
if (fMode == kProofAnalysis) ImportWrappers(source);
task->CheckNotify(kTRUE);
// If task is active, execute it
if (task->IsPostEventLoop() && task->IsActive()) {
- if (fDebug > 1) {
- cout << "== Executing post event loop task " << task->GetName() << endl;
- }
+ if (fDebug > 0) Printf("== Executing post event loop task %s", task->GetName());
task->ExecuteTask();
}
}
}
- // Check if the output need to be written to a file.
- const char *filename = output->GetFileName();
- if (!(strcmp(filename, "default"))) {
- if (fOutputEventHandler) filename = fOutputEventHandler->GetOutputFileName();
- }
-
- if (!filename || !strlen(filename)) continue;
- TFile *file = (TFile*)gROOT->GetListOfFiles()->FindObject(filename);
- if (file) file->cd();
- else file = new TFile(filename, "RECREATE");
- if (file->IsZombie()) continue;
- // Reparent data to this file
- TMethodCall callEnv;
- if (output->GetData()->IsA())
- callEnv.InitWithPrototype(output->GetData()->IsA(), "SetDirectory", "TDirectory*");
- if (callEnv.IsValid()) {
- callEnv.SetParam((Long_t) file);
- callEnv.Execute(output->GetData());
- }
- output->GetData()->Write();
}
- if (fDebug > 1) {
- cout << "<-AliAnalysisManager::UnpackOutput()" << endl;
- }
+ if (fDebug > 0) Printf("<-AliAnalysisManager::UnpackOutput()");
}
//______________________________________________________________________________
// The Terminate() function is the last function to be called during
// a query. It always runs on the client, it can be used to present
// the results graphically.
- if (fDebug > 1) {
- cout << "->AliAnalysisManager::Terminate()" << endl;
- }
+ if (fDebug > 0) Printf("->AliAnalysisManager::Terminate()");
AliAnalysisTask *task;
TIter next(fTasks);
// Call Terminate() for tasks
while ((task=(AliAnalysisTask*)next())) task->Terminate();
- if (fDebug > 1) {
- cout << "<-AliAnalysisManager::Terminate()" << endl;
- }
//
- if (fOutputEventHandler) fOutputEventHandler->TerminateIO();
+ TIter next1(fOutputs);
+ AliAnalysisDataContainer *output;
+ while ((output=(AliAnalysisDataContainer*)next1())) {
+ // Special outputs or grid files have the files already closed and written.
+ if (fMode == kGridAnalysis) continue;
+ if (output->IsSpecialOutput()&&(fMode == kProofAnalysis)) continue;
+ const char *filename = output->GetFileName();
+ if (!(strcmp(filename, "default"))) {
+ if (fOutputEventHandler) filename = fOutputEventHandler->GetOutputFileName();
+ TFile *aodfile = (TFile*)gROOT->GetListOfFiles()->FindObject(filename);
+ if (aodfile) {
+ if (fDebug > 1) Printf("Writing output handler file: %s", filename);
+ aodfile->Write();
+ continue;
+ }
+ }
+ if (!strlen(filename)) continue;
+ if (!output->GetData()) continue;
+ TFile *file = output->GetFile();
+ TDirectory *opwd = gDirectory;
+ file = (TFile*)gROOT->GetListOfFiles()->FindObject(filename);
+ if (!file) file = new TFile(filename, "RECREATE");
+ if (file->IsZombie()) continue;
+ output->SetFile(file);
+ file->cd();
+ if (fDebug > 1) Printf(" writing output data %s to file %s", output->GetData()->GetName(), file->GetName());
+ if (output->GetData()->InheritsFrom(TCollection::Class())) {
+ // If data is a collection, we set the name of the collection
+ // as the one of the container and we save as a single key.
+ TCollection *coll = (TCollection*)output->GetData();
+ coll->SetName(output->GetName());
+ coll->Write(output->GetName(), TObject::kSingleKey);
+ } else {
+ if (output->GetData()->InheritsFrom(TTree::Class())) {
+ TTree *tree = (TTree*)output->GetData();
+ tree->SetDirectory(file);
+ tree->AutoSave();
+ } else {
+ output->GetData()->Write();
+ }
+ }
+ if (opwd) opwd->cd();
+ }
+ next1.Reset();
+ while ((output=(AliAnalysisDataContainer*)next1())) {
+ // Close all files at output
+ TDirectory *opwd = gDirectory;
+ if (output->GetFile()) {
+ output->GetFile()->Close();
+ // Copy merged outputs in alien if requested
+ if (fSpecialOutputLocation.Length() &&
+ fSpecialOutputLocation.BeginsWith("alien://")) {
+ Info("Terminate", "Copy file %s to %s", output->GetFile()->GetName(),fSpecialOutputLocation.Data());
+ TFile::Cp(output->GetFile()->GetName(),
+ Form("%s/%s", fSpecialOutputLocation.Data(), output->GetFile()->GetName()));
+ }
+ }
+ if (opwd) opwd->cd();
+ }
+
+ if (fInputEventHandler) fInputEventHandler ->TerminateIO();
+ if (fOutputEventHandler) fOutputEventHandler ->TerminateIO();
+ if (fMCtruthEventHandler) fMCtruthEventHandler->TerminateIO();
+
+ Bool_t getsysInfo = ((fNSysInfo>0) && (fMode==kLocalAnalysis))?kTRUE:kFALSE;
+ if (getsysInfo) {
+ TDirectory *cdir = gDirectory;
+ TFile f("syswatch.root", "RECREATE");
+ if (!f.IsZombie()) {
+ TTree *tree = AliSysInfo::MakeTree("syswatch.log");
+ tree->SetMarkerStyle(kCircle);
+ tree->SetMarkerColor(kBlue);
+ tree->SetMarkerSize(0.5);
+ if (!gROOT->IsBatch()) {
+ tree->SetAlias("event", "id0");
+ tree->SetAlias("memUSED", "mi.fMemUsed");
+ new TCanvas("SysInfo","SysInfo",10,10,800,600);
+ tree->Draw("memUSED:event","","", 1234567890, 0);
+ }
+ tree->Write();
+ f.Close();
+ delete tree;
+ }
+ if (cdir) cdir->cd();
+ }
+ // Validate the output files
+ if (ValidateOutputFiles()) {
+ ofstream out;
+ out.open("outputs_valid", ios::out);
+ out.close();
+ }
+ if (fDebug > 0) Printf("<-AliAnalysisManager::Terminate()");
}
//______________________________________________________________________________
void AliAnalysisManager::AddTask(AliAnalysisTask *task)
{
// Adds a user task to the global list of tasks.
+ if (fTasks->FindObject(task)) {
+ Warning("AddTask", "Task %s: the same object already added to the analysis manager. Not adding.", task->GetName());
+ return;
+ }
task->SetActive(kFALSE);
fTasks->Add(task);
}
// kInputContainer = 1, used to store input data
// kOutputContainer = 2, used for posting results
if (fContainers->FindObject(name)) {
- Error("CreateContainer","A container named %s already defined !\n",name);
+ Error("CreateContainer","A container named %s already defined !",name);
return NULL;
}
AliAnalysisDataContainer *cont = new AliAnalysisDataContainer(name, datatype);
break;
case kOutputContainer:
fOutputs->Add(cont);
- if (filename && strlen(filename)) cont->SetFileName(filename);
+ if (filename && strlen(filename)) {
+ cont->SetFileName(filename);
+ cont->SetDataOwned(kFALSE); // data owned by the file
+ }
break;
case kExchangeContainer:
break;
AliAnalysisDataContainer *cont)
{
// Connect input of an existing task to a data container.
+ if (!task) {
+ Error("ConnectInput", "Task pointer is NULL");
+ return kFALSE;
+ }
if (!fTasks->FindObject(task)) {
AddTask(task);
- Warning("ConnectInput", "Task %s not registered. Now owned by analysis manager", task->GetName());
+ Info("ConnectInput", "Task %s was not registered. Now owned by analysis manager", task->GetName());
}
Bool_t connected = task->ConnectInput(islot, cont);
return connected;
AliAnalysisDataContainer *cont)
{
// Connect output of an existing task to a data container.
+ if (!task) {
+ Error("ConnectOutput", "Task pointer is NULL");
+ return kFALSE;
+ }
if (!fTasks->FindObject(task)) {
AddTask(task);
Warning("ConnectOutput", "Task %s not registered. Now owned by analysis manager", task->GetName());
{
// Initialization of analysis chain of tasks. Should be called after all tasks
// and data containers are properly connected
- // Check for input/output containers
+ // Reset flag and remove valid_outputs file if exists
fInitOK = kFALSE;
+ if (!gSystem->AccessPathName("outputs_valid"))
+ gSystem->Unlink("outputs_valid");
// Check for top tasks (depending only on input data containers)
if (!fTasks->First()) {
Error("InitAnalysis", "Analysis has no tasks !");
}
}
}
+ // Check if all special output containers have a file name provided
+ TIter nextout(fOutputs);
+ while ((cont=(AliAnalysisDataContainer*)nextout())) {
+ if (cont->IsSpecialOutput() && !strlen(cont->GetFileName())) {
+ Error("InitAnalysis", "Wrong container %s : a file name MUST be provided for special outputs", cont->GetName());
+ return kFALSE;
+ }
+ }
fInitOK = kTRUE;
return kTRUE;
}
void AliAnalysisManager::PrintStatus(Option_t *option) const
{
// Print task hierarchy.
+ if (!fInitOK) {
+ Info("PrintStatus", "Analysis manager %s not initialized : call InitAnalysis() first", GetName());
+ return;
+ }
+ Bool_t getsysInfo = ((fNSysInfo>0) && (fMode==kLocalAnalysis))?kTRUE:kFALSE;
+ if (getsysInfo)
+ Info("PrintStatus", "System information will be collected each %lld events", fNSysInfo);
TIter next(fTopTasks);
AliAnalysisTask *task;
while ((task=(AliAnalysisTask*)next()))
}
//______________________________________________________________________________
-void AliAnalysisManager::StartAnalysis(const char *type, TTree *tree)
+void AliAnalysisManager::StartAnalysis(const char *type, TTree *tree, Long64_t nentries, Long64_t firstentry)
{
-// Start analysis for this manager. Analysis task can be: LOCAL, PROOF or GRID.
+// Start analysis for this manager. Analysis task can be: LOCAL, PROOF, GRID or
+// MIX. Process nentries starting from firstentry
if (!fInitOK) {
Error("StartAnalysis","Analysis manager was not initialized !");
return;
}
- if (fDebug>1) {
- cout << "StartAnalysis: " << GetName() << endl;
- }
+ if (fDebug > 0) Printf("StartAnalysis %s",GetName());
TString anaType = type;
anaType.ToLower();
fMode = kLocalAnalysis;
- if (tree) {
- if (anaType.Contains("proof")) fMode = kProofAnalysis;
- else if (anaType.Contains("grid")) fMode = kGridAnalysis;
- }
+ Bool_t runlocalinit = kTRUE;
+ if (anaType.Contains("file")) runlocalinit = kFALSE;
+ if (anaType.Contains("proof")) fMode = kProofAnalysis;
+ else if (anaType.Contains("grid")) fMode = kGridAnalysis;
+ else if (anaType.Contains("mix")) fMode = kMixingAnalysis;
+
if (fMode == kGridAnalysis) {
- Warning("StartAnalysis", "GRID analysis mode not implemented. Running local.");
- fMode = kLocalAnalysis;
+ if (!fGridHandler) {
+ Error("StartAnalysis", "Cannot start grid analysis without a grid handler.");
+ Info("===", "Add an AliAnalysisAlien object as plugin for this manager and configure it.");
+ return;
+ }
+ // Write analysis manager in the analysis file
+ cout << "===== RUNNING GRID ANALYSIS: " << GetName() << endl;
+ // run local task configuration
+ TIter nextTask(fTasks);
+ AliAnalysisTask *task;
+ while ((task=(AliAnalysisTask*)nextTask())) {
+ task->LocalInit();
+ }
+ if (!fGridHandler->StartAnalysis(nentries, firstentry)) {
+ Info("StartAnalysis", "Grid analysis was stopped and cannot be terminated");
+ return;
+ }
+
+ // Terminate grid analysis
+ if (fSelector && fSelector->GetStatus() == -1) return;
+ if (fGridHandler->GetRunMode() == AliAnalysisGrid::kOffline) return;
+ cout << "===== MERGING OUTPUTS REGISTERED BY YOUR ANALYSIS JOB: " << GetName() << endl;
+ if (!fGridHandler->MergeOutputs()) {
+ // Return if outputs could not be merged or if it alien handler
+ // was configured for offline mode or local testing.
+ return;
+ }
+ ImportWrappers(NULL);
+ Terminate();
+ return;
}
- char line[128];
+ char line[256];
SetEventLoop(kFALSE);
- // Disable all branches if requested and set event loop mode
- if (tree) {
- if (TestBit(kDisableBranches)) {
- printf("Disabling all branches...\n");
-// tree->SetBranchStatus("*",0); // not yet working
+ // Enable event loop mode if a tree was provided
+ if (tree || fMode==kMixingAnalysis) SetEventLoop(kTRUE);
+
+ TChain *chain = 0;
+ TString ttype = "TTree";
+ if (tree && tree->IsA() == TChain::Class()) {
+ chain = (TChain*)tree;
+ if (!chain || !chain->GetListOfFiles()->First()) {
+ Error("StartAnalysis", "Cannot process null or empty chain...");
+ return;
}
- SetEventLoop(kTRUE);
+ ttype = "TChain";
}
- TChain *chain = dynamic_cast<TChain*>(tree);
-
- // Initialize locally all tasks
+ // Initialize locally all tasks (happens for all modes)
TIter next(fTasks);
AliAnalysisTask *task;
- while ((task=(AliAnalysisTask*)next())) {
- task->LocalInit();
- }
+ if (runlocalinit) {
+ while ((task=(AliAnalysisTask*)next())) {
+ task->LocalInit();
+ }
+ }
switch (fMode) {
case kLocalAnalysis:
if (!tree) {
- TIter next(fTasks);
- AliAnalysisTask *task;
+ TIter nextT(fTasks);
// Call CreateOutputObjects for all tasks
- while ((task=(AliAnalysisTask*)next())) {
+ while ((task=(AliAnalysisTask*)nextT())) {
TDirectory *curdir = gDirectory;
task->CreateOutputObjects();
if (curdir) curdir->cd();
return;
}
// Run tree-based analysis via AliAnalysisSelector
-// gROOT->ProcessLine(".L $ALICE_ROOT/ANALYSIS/AliAnalysisSelector.cxx+");
cout << "===== RUNNING LOCAL ANALYSIS " << GetName() << " ON TREE " << tree->GetName() << endl;
- sprintf(line, "AliAnalysisSelector *selector = new AliAnalysisSelector((AliAnalysisManager*)0x%lx);",(ULong_t)this);
- gROOT->ProcessLine(line);
- sprintf(line, "((TTree*)0x%lx)->Process(selector);",(ULong_t)tree);
- gROOT->ProcessLine(line);
+ fSelector = new AliAnalysisSelector(this);
+ tree->Process(fSelector, "", nentries, firstentry);
break;
case kProofAnalysis:
if (!gROOT->GetListOfProofs() || !gROOT->GetListOfProofs()->GetEntries()) {
- printf("StartAnalysis: no PROOF!!!\n");
+ Error("StartAnalysis", "No PROOF!!! Aborting.");
return;
}
sprintf(line, "gProof->AddInput((TObject*)0x%lx);", (ULong_t)this);
if (chain) {
chain->SetProof();
cout << "===== RUNNING PROOF ANALYSIS " << GetName() << " ON CHAIN " << chain->GetName() << endl;
- chain->Process("AliAnalysisSelector");
+ chain->Process("AliAnalysisSelector", "", nentries, firstentry);
} else {
- printf("StartAnalysis: no chain\n");
+ Error("StartAnalysis", "No chain!!! Aborting.");
return;
}
break;
case kGridAnalysis:
Warning("StartAnalysis", "GRID analysis mode not implemented. Running local.");
+ break;
+ case kMixingAnalysis:
+ // Run event mixing analysis
+ if (!fEventPool) {
+ Error("StartAnalysis", "Cannot run event mixing without event pool");
+ return;
+ }
+ cout << "===== RUNNING EVENT MIXING ANALYSIS " << GetName() << endl;
+ fSelector = new AliAnalysisSelector(this);
+ while ((chain=fEventPool->GetNextChain())) {
+ next.Reset();
+ // Call NotifyBinChange for all tasks
+ while ((task=(AliAnalysisTask*)next()))
+ if (!task->IsPostEventLoop()) task->NotifyBinChange();
+ chain->Process(fSelector);
+ }
+ PackOutput(fSelector->GetOutputList());
+ Terminate();
+ }
+}
+
+//______________________________________________________________________________
+void AliAnalysisManager::StartAnalysis(const char *type, const char *dataset, Long64_t nentries, Long64_t firstentry)
+{
+// Start analysis for this manager on a given dataset. Analysis task can be:
+// LOCAL, PROOF or GRID. Process nentries starting from firstentry.
+ if (!fInitOK) {
+ Error("StartAnalysis","Analysis manager was not initialized !");
+ return;
+ }
+ if (fDebug > 0) Printf("StartAnalysis %s",GetName());
+ TString anaType = type;
+ anaType.ToLower();
+ if (!anaType.Contains("proof")) {
+ Error("StartAnalysis", "Cannot process datasets in %s mode. Try PROOF.", type);
+ return;
+ }
+ fMode = kProofAnalysis;
+ char line[256];
+ SetEventLoop(kTRUE);
+ // Set the dataset flag
+ TObject::SetBit(kUseDataSet);
+ fTree = 0;
+
+ // Initialize locally all tasks
+ TIter next(fTasks);
+ AliAnalysisTask *task;
+ while ((task=(AliAnalysisTask*)next())) {
+ task->LocalInit();
+ }
+
+ if (!gROOT->GetListOfProofs() || !gROOT->GetListOfProofs()->GetEntries()) {
+ Error("StartAnalysis", "No PROOF!!! Aborting.");
+ return;
+ }
+ sprintf(line, "gProof->AddInput((TObject*)0x%lx);", (ULong_t)this);
+ gROOT->ProcessLine(line);
+ sprintf(line, "gProof->GetDataSet(\"%s\");", dataset);
+ if (!gROOT->ProcessLine(line)) {
+ Error("StartAnalysis", "Dataset %s not found", dataset);
+ return;
+ }
+ sprintf(line, "gProof->Process(\"%s\", \"AliAnalysisSelector\", \"\", %lld, %lld);",
+ dataset, nentries, firstentry);
+ cout << "===== RUNNING PROOF ANALYSIS " << GetName() << " ON DATASET " << dataset << endl;
+ gROOT->ProcessLine(line);
+}
+
+//______________________________________________________________________________
+TFile *AliAnalysisManager::OpenProofFile(const char *filename, const char *option)
+{
+// Opens a special output file used in PROOF.
+ char line[256];
+ if (fMode!=kProofAnalysis || !fSelector) {
+ Error("OpenProofFile","Cannot open PROOF file %s",filename);
+ return NULL;
+ }
+ if (fSpecialOutputLocation.Length()) {
+ TFile *f = (TFile*)gROOT->GetListOfFiles()->FindObject(filename);
+ if (!f) f = new TFile(filename, option);
+ return f;
+ }
+ sprintf(line, "TProofOutputFile *pf = new TProofOutputFile(\"%s\");", filename);
+ if (fDebug > 1) Printf("=== %s", line);
+ gROOT->ProcessLine(line);
+ sprintf(line, "pf->OpenFile(\"%s\");", option);
+ gROOT->ProcessLine(line);
+ if (fDebug > 1) {
+ gROOT->ProcessLine("pf->Print()");
+ Printf(" == proof file name: %s", gFile->GetName());
}
+ sprintf(line, "((TList*)0x%lx)->Add(pf);",(ULong_t)fSelector->GetOutputList());
+ if (fDebug > 1) Printf("=== %s", line);
+ gROOT->ProcessLine(line);
+ return gFile;
}
//______________________________________________________________________________
void AliAnalysisManager::ExecAnalysis(Option_t *option)
{
// Execute analysis.
+ static Long64_t ncalls = 0;
+ Bool_t getsysInfo = ((fNSysInfo>0) && (fMode==kLocalAnalysis))?kTRUE:kFALSE;
+ if (getsysInfo && ncalls==0) AliSysInfo::AddStamp("Start", (Int_t)ncalls);
+ ncalls++;
if (!fInitOK) {
Error("ExecAnalysis", "Analysis manager was not initialized !");
return;
AliAnalysisTask *task;
// Check if the top tree is active.
if (fTree) {
- if (fDebug>1) {
- printf("AliAnalysisManager::ExecAnalysis\n");
- }
TIter next(fTasks);
// De-activate all tasks
while ((task=(AliAnalysisTask*)next())) task->SetActive(kFALSE);
- AliAnalysisDataContainer *cont = (AliAnalysisDataContainer*)fInputs->At(0);
+ AliAnalysisDataContainer *cont = fCommonInput;
+ if (!cont) cont = (AliAnalysisDataContainer*)fInputs->At(0);
if (!cont) {
Error("ExecAnalysis","Cannot execute analysis in TSelector mode without at least one top container");
return;
}
cont->SetData(fTree); // This will notify all consumers
+ Long64_t entry = fTree->GetTree()->GetReadEntry();
+
//
-// Call BeginEvent() for optional output and MC services
- if (fOutputEventHandler) fOutputEventHandler ->BeginEvent();
- if (fMCtruthEventHandler) fMCtruthEventHandler->BeginEvent();
+// Call BeginEvent() for optional input/output and MC services
+ if (fInputEventHandler) fInputEventHandler ->BeginEvent(entry);
+ if (fOutputEventHandler) fOutputEventHandler ->BeginEvent(entry);
+ if (fMCtruthEventHandler) fMCtruthEventHandler->BeginEvent(entry);
//
// Execute the tasks
- TIter next1(cont->GetConsumers());
+// TIter next1(cont->GetConsumers());
+ TIter next1(fTopTasks);
while ((task=(AliAnalysisTask*)next1())) {
if (fDebug >1) {
cout << " Executing task " << task->GetName() << endl;
}
//
// Call FinishEvent() for optional output and MC services
+ if (fInputEventHandler) fInputEventHandler ->FinishEvent();
if (fOutputEventHandler) fOutputEventHandler ->FinishEvent();
if (fMCtruthEventHandler) fMCtruthEventHandler->FinishEvent();
-//
+ // Gather system information if requested
+ if (getsysInfo && ((ncalls%fNSysInfo)==0))
+ AliSysInfo::AddStamp(Form("Event#%lld",ncalls),(Int_t)ncalls);
return;
}
// The event loop is not controlled by TSelector
//
-// Call BeginEvent() for optional output and MC services
- if (fOutputEventHandler) fOutputEventHandler ->BeginEvent();
- if (fMCtruthEventHandler) fMCtruthEventHandler->BeginEvent();
+// Call BeginEvent() for optional input/output and MC services
+ if (fInputEventHandler) fInputEventHandler ->BeginEvent(-1);
+ if (fOutputEventHandler) fOutputEventHandler ->BeginEvent(-1);
+ if (fMCtruthEventHandler) fMCtruthEventHandler->BeginEvent(-1);
TIter next2(fTopTasks);
while ((task=(AliAnalysisTask*)next2())) {
task->SetActive(kTRUE);
}
//
// Call FinishEvent() for optional output and MC services
- if (fOutputEventHandler) fOutputEventHandler->FinishEvent();
+ if (fInputEventHandler) fInputEventHandler ->FinishEvent();
+ if (fOutputEventHandler) fOutputEventHandler ->FinishEvent();
if (fMCtruthEventHandler) fMCtruthEventHandler->FinishEvent();
}
{
// Finish analysis.
}
+
+//______________________________________________________________________________
+void AliAnalysisManager::SetInputEventHandler(AliVEventHandler* handler)
+{
+// Set the input event handler and create a container for it.
+ fInputEventHandler = handler;
+ fCommonInput = CreateContainer("cAUTO_INPUT", TChain::Class(), AliAnalysisManager::kInputContainer);
+ Warning("SetInputEventHandler", " An automatic input container for the input chain was created.\nPlease use: mgr->GetCommonInputContainer() to access it.");
+}
+
+//______________________________________________________________________________
+void AliAnalysisManager::SetOutputEventHandler(AliVEventHandler* handler)
+{
+// Set the input event handler and create a container for it.
+ fOutputEventHandler = handler;
+ fCommonOutput = CreateContainer("cAUTO_OUTPUT", TTree::Class(), AliAnalysisManager::kOutputContainer, "default");
+ fCommonOutput->SetSpecialOutput();
+ Warning("SetOutputEventHandler", " An automatic output container for the output tree was created.\nPlease use: mgr->GetCommonOutputContainer() to access it.");
+}
+
+//______________________________________________________________________________
+void AliAnalysisManager::RegisterExtraFile(const char *fname)
+{
+// This method is used externally to register output files which are not
+// connected to any output container, so that the manager can properly register,
+// retrieve or merge them when running in distributed mode. The file names are
+// separated by blancs. The method has to be called in MyAnalysisTask::LocalInit().
+ if (fExtraFiles.Length()) fExtraFiles += " ";
+ fExtraFiles += fname;
+}
+
+//______________________________________________________________________________
+Bool_t AliAnalysisManager::GetFileFromWrapper(const char *filename, TList *source)
+{
+// Copy a file from the location specified ina the wrapper with the same name from the source list.
+ char full_path[512];
+ char ch_url[512];
+ TObject *pof = source->FindObject(filename);
+ if (!pof || !pof->InheritsFrom("TProofOutputFile")) {
+ Error("GetFileFromWrapper", "TProofOutputFile object not found in output list for file %s", filename);
+ return kFALSE;
+ }
+ gROOT->ProcessLine(Form("sprintf((char*)0x%lx, \"%%s\", ((TProofOutputFile*)0x%lx)->GetOutputFileName();)", full_path, pof));
+ gROOT->ProcessLine(Form("sprintf((char*)0x%lx, \"%%s\", gProof->GetUrl();)", ch_url));
+ TString clientUrl(ch_url);
+ TString full_path_str(full_path);
+ if (clientUrl.Contains("localhost")){
+ TObjArray* array = full_path_str.Tokenize ( "//" );
+ TObjString *strobj = ( TObjString *)array->At(1);
+ TObjArray* arrayPort = strobj->GetString().Tokenize ( ":" );
+ TObjString *strobjPort = ( TObjString *) arrayPort->At(1);
+ full_path_str.ReplaceAll(strobj->GetString().Data(),"localhost:PORT");
+ full_path_str.ReplaceAll(":PORT",Form(":%s",strobjPort->GetString().Data()));
+ if (fDebug > 1) Info("GetFileFromWrapper","Using tunnel from %s to %s",full_path_str.Data(),filename);
+ delete arrayPort;
+ delete array;
+ }
+ if (fDebug > 1)
+ Info("GetFileFromWrapper","Copying file %s from PROOF scratch space", full_path_str.Data());
+ Bool_t gotit = TFile::Cp(full_path_str.Data(), filename);
+ if (!gotit)
+ Error("GetFileFromWrapper", "Could not get file %s from proof scratch space", filename);
+ return gotit;
+}
+
+//______________________________________________________________________________
+void AliAnalysisManager::GetAnalysisTypeString(TString &type) const
+{
+// Fill analysis type in the provided string.
+ switch (fMode) {
+ case kLocalAnalysis:
+ type = "local";
+ return;
+ case kProofAnalysis:
+ type = "proof";
+ return;
+ case kGridAnalysis:
+ type = "grid";
+ return;
+ case kMixingAnalysis:
+ type = "mix";
+ }
+}
+
+//______________________________________________________________________________
+Bool_t AliAnalysisManager::ValidateOutputFiles() const
+{
+// Validate all output files.
+ TIter next(fOutputs);
+ AliAnalysisDataContainer *output;
+ TDirectory *cdir = gDirectory;
+ while ((output=(AliAnalysisDataContainer*)next())) {
+ TString filename = output->GetFileName();
+ if (filename == "default") {
+ if (!fOutputEventHandler) continue;
+ filename = fOutputEventHandler->GetOutputFileName();
+ }
+ // Check if the file is closed
+ TFile *file = (TFile*)gROOT->GetListOfFiles()->FindObject(filename);
+ if (file) {
+ Warning("ValidateOutputs", "File %s was not closed. Closing.", filename.Data());
+ file->Close();
+ }
+ file = TFile::Open(filename);
+ if (!file || file->IsZombie() || file->TestBit(TFile::kRecovered)) {
+ Error("ValidateOutputs", "Output file <%s> was not created or invalid", filename.Data());
+ cdir->cd();
+ return kFALSE;
+ }
+ file->Close();
+ }
+ cdir->cd();
+ return kTRUE;
+}
git://git.uio.no / u / mrichter / AliRoot.git / blobdiff