]> git.uio.no Git - u/mrichter/AliRoot.git/blobdiff - ANALYSIS/AliAnalysisTaskMCParticleFilter.cxx
Fixed grep syntax on OS X in the Analysis Plugin
[u/mrichter/AliRoot.git] / ANALYSIS / AliAnalysisTaskMCParticleFilter.cxx
index 59544ff361425489677f25d6e777b87db9e92ab8..82849a73a96c5766f9f46b836ac45510aee7b01f 100644 (file)
 #include <TChain.h>
 #include <TFile.h>
 #include "TParticle.h"
+#include "TParameter.h"
 #include "TString.h"
+#include "TList.h"
+#include "TProfile.h"
+#include "TH1F.h"
+
 
 #include "AliAnalysisTaskMCParticleFilter.h"
 #include "AliAnalysisManager.h"
 #include "AliStack.h"
 #include "AliMCEvent.h"
 #include "AliMCEventHandler.h"
+#include "AliESDInputHandler.h"
 #include "AliAODEvent.h"
 #include "AliAODHeader.h"
 #include "AliAODMCHeader.h"
 #include "AliAODHandler.h"
 #include "AliAODVertex.h"
 #include "AliAODMCParticle.h"
-
+#include "AliCollisionGeometry.h"
+#include "AliGenDPMjetEventHeader.h"
+#include "AliGenHijingEventHeader.h"
+#include "AliGenPythiaEventHeader.h"
+#include "AliGenCocktailEventHeader.h"
+#include "AliGenEventHeaderTunedPbPb.h"
+#include "AliESDtrack.h"
+#include "AliAODTrack.h"
+#include "AliAODPid.h"
+#include "AliESDpid.h"
 
 #include "AliLog.h"
 
@@ -46,21 +61,83 @@ ClassImp(AliAnalysisTaskMCParticleFilter)
 
 //____________________________________________________________________
 AliAnalysisTaskMCParticleFilter::AliAnalysisTaskMCParticleFilter():
-AliAnalysisTaskSE(),
-  fTrackFilterMother(0x0)
+  AliAnalysisTaskSE(),
+  fTrackFilterMother(0x0),
+  fAODMcHeader(0x0),
+  fAODMcParticles(0x0),
+  fHistList(0x0)
 {
   // Default constructor
 }
 
+Bool_t AliAnalysisTaskMCParticleFilter::Notify()
+{
+  //
+  // Implemented Notify() to read the cross sections
+  // from pyxsec.root
+  // 
+  AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
+  TTree *tree = mgr->GetTree();
+  Double_t xsection = 0;
+  UInt_t   ntrials  = 0;
+  if(tree){
+    TFile *curfile = tree->GetCurrentFile();
+    if (!curfile) {
+      Error("Notify","No current file");
+      return kFALSE;
+    }
+
+    TString fileName(curfile->GetName());
+    TString datafile = mgr->GetInputEventHandler()->GetInputFileName();
+    if (fileName.Contains(datafile)) {
+        fileName.ReplaceAll(datafile, "pyxsec.root");
+    }
+    else if(fileName.Contains("AliESDs.root")){
+        fileName.ReplaceAll("AliESDs.root", "pyxsec.root");
+    }
+    else if(fileName.Contains("AliAOD.root")){
+        fileName.ReplaceAll("AliAOD.root", "pyxsec.root");
+    }
+    else if(fileName.Contains("galice.root")){
+        // for running with galice and kinematics alone...                      
+        fileName.ReplaceAll("galice.root", "pyxsec.root");
+    }
+
+
+    TFile *fxsec = TFile::Open(fileName.Data());
+    if(!fxsec){
+      AliInfo(Form("%s:%d %s not found in the Input",(char*)__FILE__,__LINE__,fileName.Data()));
+      // not a severe condition we just do not have the information...
+      return kTRUE;
+    }
+    TTree *xtree = (TTree*)fxsec->Get("Xsection");
+    if(!xtree){
+      AliWarning(Form("%s:%d tree not found in the pyxsec.root",(char*)__FILE__,__LINE__));
+      return kTRUE;
+    }
+    xtree->SetBranchAddress("xsection",&xsection);
+    xtree->SetBranchAddress("ntrials",&ntrials);
+    xtree->GetEntry(0);
+    ((TProfile*)(fHistList->FindObject("h1Xsec")))->Fill("<#sigma>",xsection);
+  }
+  return kTRUE;
+}
+
+
+
 //____________________________________________________________________
 AliAnalysisTaskMCParticleFilter::AliAnalysisTaskMCParticleFilter(const char* name):
     AliAnalysisTaskSE(name),
-    fTrackFilterMother(0x0)
+    fTrackFilterMother(0x0),
+    fAODMcHeader(0x0),
+    fAODMcParticles(0x0),
+    fHistList(0x0)
 {
   // Default constructor
+  DefineOutput(1, TList::Class());  
 }
 
-
+/*
 //____________________________________________________________________
 AliAnalysisTaskMCParticleFilter::AliAnalysisTaskMCParticleFilter(const AliAnalysisTaskMCParticleFilter& obj):
     AliAnalysisTaskSE(obj),
@@ -68,14 +145,21 @@ AliAnalysisTaskMCParticleFilter::AliAnalysisTaskMCParticleFilter(const AliAnalys
 {
   // Copy constructor
 }
-
+*/
 //____________________________________________________________________
 AliAnalysisTaskMCParticleFilter::~AliAnalysisTaskMCParticleFilter()
 {
-  //  if( fTrackFilterMother ) delete fTrackFilterMother;
-}
 
+  if(fAODMcHeader){
+    delete fAODMcHeader;
+  }
+  if(fAODMcParticles){
+    fAODMcParticles->Delete();
+    delete fAODMcParticles;
+  }
+}
 
+/*
 //____________________________________________________________________
 AliAnalysisTaskMCParticleFilter& AliAnalysisTaskMCParticleFilter::operator=(const AliAnalysisTaskMCParticleFilter& other)
 {
@@ -86,11 +170,13 @@ AliAnalysisTaskMCParticleFilter& AliAnalysisTaskMCParticleFilter::operator=(cons
   }
   return *this;
 }
-
+*/
 //____________________________________________________________________
 void AliAnalysisTaskMCParticleFilter::UserCreateOutputObjects()
 {
   // Create the output container
+  
+
     if (OutputTree()&&fTrackFilterMother) 
        OutputTree()->GetUserInfo()->Add(fTrackFilterMother);
 
@@ -104,38 +190,52 @@ void AliAnalysisTaskMCParticleFilter::UserCreateOutputObjects()
 
 
     // mcparticles
-    TClonesArray *tca = new TClonesArray("AliAODMCParticle", 0);
-    tca->SetName(AliAODMCParticle::StdBranchName());
-    AddAODBranch("TClonesArray",&tca);
+    fAODMcParticles = new TClonesArray("AliAODMCParticle", 0);
+    fAODMcParticles->SetName(AliAODMCParticle::StdBranchName());
+    AddAODBranch("TClonesArray",&fAODMcParticles);
 
     // MC header...
-    AliAODMCHeader *mcHeader = new AliAODMCHeader();
-    Printf("AODMCHeader %p",mcHeader);
-    Printf("AODMCHeader ** %p",&mcHeader);
-    mcHeader->SetName(AliAODMCHeader::StdBranchName());
-    AddAODBranch("AliAODMCHeader",&mcHeader);    
-
-    
+    fAODMcHeader = new AliAODMCHeader();
+    fAODMcHeader->SetName(AliAODMCHeader::StdBranchName());
+    AddAODBranch("AliAODMCHeader",&fAODMcHeader);    
 
     AliMCEventHandler *mcH = (AliMCEventHandler*) ((AliAnalysisManager::GetAnalysisManager())->GetMCtruthEventHandler()); 
     AliAODHandler *aodH = dynamic_cast<AliAODHandler*> ((AliAnalysisManager::GetAnalysisManager())->GetOutputEventHandler());
     if(!aodH){
-      Printf("%s:&d Could not get AODHandler",(char*)__FILE__,__LINE__);
+      AliWarning("Could not get AODHandler");
       return;
     }
     aodH->SetMCEventHandler(mcH);
 
+
+    // these are histograms, for averaging and summing
+    // do it via histograms to be PROOF-proof
+    // which merges the results from different workers
+    // histos are not saved reside only in memory
+    
+    
+
+    fHistList = new TList();
+    TProfile *h1Xsec = new TProfile("h1Xsec","xsec from pyxsec.root",1,0,1);
+    h1Xsec->GetXaxis()->SetBinLabel(1,"<#sigma>");
+    fHistList->Add(h1Xsec);
+    TH1F* h1Trials = new TH1F("h1Trials","trials from MC header",1,0,1);
+    h1Trials->GetXaxis()->SetBinLabel(1,"#sum{ntrials}");
+    fHistList->Add(h1Trials);
+
+    PostData(1,fHistList);
     
 }
 
 //____________________________________________________________________
 void AliAnalysisTaskMCParticleFilter::UserExec(Option_t */*option*/)
 {
-// Execute analysis for current event
-//
-
-// Fill AOD tracks from Kinematic stack
-    
+  // Execute analysis for current event
+  //
+  
+  // Fill AOD tracks from Kinematic stack
+  PostData(1,fHistList);
+  
   // get AliAOD Event 
   AliAODEvent* aod = AODEvent();
   if (!aod) {
@@ -148,6 +248,13 @@ void AliAnalysisTaskMCParticleFilter::UserExec(Option_t */*option*/)
     AliWarning("No MC handler Found");
     return;
   }
+  
+  AliAODHandler *aodH = dynamic_cast<AliAODHandler*> ((AliAnalysisManager::GetAnalysisManager())->GetOutputEventHandler());
+  if(!aodH){
+    AliWarning("Could not get AODHandler");
+    return;
+  }
+
 
 
   // fetch the output 
@@ -164,86 +271,185 @@ void AliAnalysisTaskMCParticleFilter::UserExec(Option_t */*option*/)
     return;
   }
 
-  AliStack* stack = mcE->Stack();
   Int_t np    = mcE->GetNumberOfTracks();
-  Int_t nprim = stack->GetNprimary();
+  Int_t nprim = mcE->GetNumberOfPrimaries();
   // TODO ADD MC VERTEX
+
+  // Get the proper MC Collision Geometry
+  AliGenEventHeader* mcEH = mcE->GenEventHeader();
+
+  AliGenPythiaEventHeader *pyH  = dynamic_cast<AliGenPythiaEventHeader*>(mcEH);
+  AliGenHijingEventHeader *hiH  = 0;
+  AliCollisionGeometry    *colG = 0;
+  AliGenDPMjetEventHeader *dpmH = 0;
+  AliGenEventHeaderTunedPbPb *tunedH = 0;
+
+  // it can be only one save some casts
+  // assuming PYTHIA and HIJING are the most likely ones...
+  if(!pyH){
+      hiH = dynamic_cast<AliGenHijingEventHeader*>(mcEH);
+      if(!hiH){
+         dpmH = dynamic_cast<AliGenDPMjetEventHeader*>(mcEH);
+         if(!dpmH){
+           tunedH = dynamic_cast<AliGenEventHeaderTunedPbPb*>(mcEH);
+         }
+      }
+  }
   
-  // We take all real primaries
+  if (hiH || dpmH) colG = dynamic_cast<AliCollisionGeometry*>(mcEH);
+
+  // fetch the trials on a event by event basis, not from pyxsec.root otherwise 
+  // we will get a problem when running on proof since Notify may be called 
+  // more than once per file
+  // consider storing this information in the AOD output via AliAODHandler
+  Float_t ntrials = 0;
+  if (!colG) {
+    AliGenCocktailEventHeader *ccEH = dynamic_cast<AliGenCocktailEventHeader *>(mcEH);
+    if (ccEH) {
+      TList *genHeaders = ccEH->GetHeaders();
+      for (int imch=0; imch<genHeaders->GetEntries(); imch++) {
+       if(!pyH)pyH = dynamic_cast<AliGenPythiaEventHeader*>(genHeaders->At(imch));
+       if(!hiH)hiH = dynamic_cast<AliGenHijingEventHeader*>(genHeaders->At(imch));
+       if(!colG)colG = dynamic_cast<AliCollisionGeometry *>(genHeaders->At(imch));
+       if(!dpmH)dpmH = dynamic_cast<AliGenDPMjetEventHeader*>(genHeaders->At(imch));
+      }
+    }
+  }
+
+  // take the trials from the p+p event
+  if(hiH)ntrials = hiH->Trials();
+  if(dpmH)ntrials = dpmH->Trials();
+  if(pyH)ntrials = pyH->Trials();
+  if(ntrials)((TH1F*)(fHistList->FindObject("h1Trials")))->Fill("#sum{ntrials}",ntrials); 
+  
+
+
+
+  if (colG) {
+    fAODMcHeader->SetReactionPlaneAngle(colG->ReactionPlaneAngle());
+    AliInfo(Form("Found Collision Geometry. Got Reaction Plane %lf\n", colG->ReactionPlaneAngle()));
+  }
+  else if(tunedH) {
+    fAODMcHeader->SetReactionPlaneAngle(tunedH->GetPsi2());
+    fAODMcHeader->SetCrossSection(tunedH->GetCentrality());
+  }
 
 
-           
   Int_t j=0;
   for (Int_t ip = 0; ip < np; ip++){
-    AliMCParticle* mcpart =  mcE->GetTrack(ip);
+    AliMCParticle* mcpart = (AliMCParticle*) mcE->GetTrack(ip);
     TParticle* part = mcpart->Particle();
-    
     Float_t xv = part->Vx();
     Float_t yv = part->Vy();
     Float_t zv = part->Vz();
     Float_t rv = TMath::Sqrt(xv * xv + yv * yv);
       
     Bool_t write = kFALSE;
-
+    
     if (ip < nprim) {
       // Select the primary event
       write = kTRUE;
-    } else if (part->GetUniqueID() == 4) {
+    } else if (part->GetUniqueID() == kPDecay) {
       // Particles from decay
       // Check that the decay chain ends at a primary particle
-      TParticle* mother = part;
-      Int_t imo = part->GetFirstMother();
-      while((imo >= nprim) && (mother->GetUniqueID() == 4)) {
-       mother =  mcE->Stack()->Particle(imo);
-       imo =  mother->GetFirstMother();
+      AliMCParticle* mother = mcpart;
+      Int_t imo = mcpart->GetMother();
+      while((imo >= nprim) && (mother->Particle()->GetUniqueID() == kPDecay)) {
+       mother =  (AliMCParticle*) mcE->GetTrack(imo);
+       imo =  mother->GetMother();
       }
-      // Select according to pseudorapidity and production point 
-       if (imo < nprim && Select(mother, rv, zv)) 
-         write = kTRUE;
-    } else if (part->GetUniqueID() == 5) {
+      // Select according to pseudorapidity and production point of primary ancestor
+      if (imo < nprim)write = kTRUE;         
+      // if(!Select(((AliMCParticle*) mcE->GetTrack(imo))->Particle(), rv, zv))write = kFALSE; // selection on eta and phi of the mother
+    } else if (part->GetUniqueID() == kPPair) {
       // Now look for pair production
-      continue;
-      Int_t imo = part->GetFirstMother();
+      Int_t imo = mcpart->GetMother();
       if (imo < nprim) {
        // Select, if the gamma is a primary
        write = kTRUE;
       } else {
        // Check if the gamma comes from the decay chain of a primary particle
-       TParticle* mother = mcE->Stack()->Particle(imo);
-       imo = mother->GetFirstMother();
-       while((imo >= nprim) && (mother->GetUniqueID() == 4)) {
-         mother =  mcE->Stack()->Particle(imo);
-         imo =  mother->GetFirstMother();
+       AliMCParticle* mother =  (AliMCParticle*) mcE->GetTrack(imo);
+       imo = mother->GetMother();
+       while((imo >= nprim) && (mother->Particle()->GetUniqueID() == kPDecay)) {
+         mother =   (AliMCParticle*) mcE->GetTrack(imo);
+         imo =  mother->GetMother();
        }
        // Select according to pseudorapidity and production point 
-       if (imo < nprim && Select(mother, rv, zv)) 
+       if (imo < nprim && Select(mother->Particle(), rv, zv)) 
          write = kTRUE;
       }
     }
-    /*
-    else if (part->GetUniqueID() == 13){
-      // Evaporation
-      // Check that we end at a primary particle
-      TParticle* mother = part;
-      Int_t imo = part->GetFirstMother();
-      while((imo >= nprim) && ((mother->GetUniqueID() == 4 ) || ( mother->GetUniqueID() == 13))) {
-       mother =  mcE->Stack()->Particle(imo);
-       imo =  mother->GetFirstMother();
-      }
-      // Select according to pseudorapidity and production point 
-       if (imo < nprim && Select(mother, rv, zv)) 
-         write = kTRUE;
-    }
-    */    
+
     if (write) {
       if(mcH)mcH->SelectParticle(ip);
-      j++;
+      j++;      
     }
   }
 
+  /*
+
+  // check varibales for charm need all daughters
+  static int  iTaken = 0;
+  static int  iAll = 0;
+  static int  iCharm = 0;
+
+  for (Int_t ip = 0; ip < np; ip++){
+    AliMCParticle* mcpart = (AliMCParticle*) mcE->GetTrack(ip);
+    TParticle* part = mcpart->Particle();
+    // debug info to check fro charm daugthers
+    if((TMath::Abs(part->GetPdgCode()))==411){
+      iCharm++;
+      Int_t d0 =  part->GetFirstDaughter();
+      Int_t d1 =  part->GetLastDaughter();
+      if(d0>0&&d1>0){
+       for(int id = d0;id <= d1;id++){
+         iAll++;
+         if(mcH->IsParticleSelected(id)){
+           iTaken++;
+           Printf("> %d/%d Taken",id,nprim);
+           PrintMCParticle( (AliMCParticle*)mcE->GetTrack(id),id);
+         }
+         else{
+           Printf("> %d/%d NOT Taken",id,nprim);
+           PrintMCParticle( (AliMCParticle*)mcE->GetTrack(id),id);
+         }
+       }
+      }
+    }// if charm
+    AliInfo(Form("Taken daughters %d/%d of %d charm",iTaken,iAll,iCharm));
+  }
+  */
+
+
+  aodH->StoreMCParticles();
+
   return;
 }
 
+void AliAnalysisTaskMCParticleFilter::Terminate(Option_t */*option*/){
+  //
+  // Terminate the execution save the PYTHIA x_section to the UserInfo()
+  //
+
+
+  fHistList = (TList*)GetOutputData(1);
+  if(!fHistList){
+    Printf("%s:%d Output list not found",(char*)__FILE__,__LINE__);
+    return;
+  }
+
+  TProfile *hXsec = ((TProfile*)(fHistList->FindObject("h1Xsec")));
+  TH1F* hTrials  = ((TH1F*)(fHistList->FindObject("h1Trials")));
+  if(!hXsec)return;
+  if(!hTrials)return;
+
+  Float_t xsec = hXsec->GetBinContent(1);
+  Float_t trials = hTrials->Integral();
+  AliInfo(Form("Average -section %.4E and total number of trials %E",xsec,trials));
+
+}
+
 Bool_t AliAnalysisTaskMCParticleFilter::Select(TParticle* part, Float_t rv, Float_t zv)
 {
   // Selection accoring to eta of the mother and production point
@@ -259,8 +465,12 @@ Bool_t AliAnalysisTaskMCParticleFilter::Select(TParticle* part, Float_t rv, Floa
   // larger for V0s in the TPC
   //  if (TMath::Abs(eta) < 2.5 && rv < 250. && TMath::Abs(zv)<255)return kTRUE;
 
+  if (TMath::Abs(eta) < 2.5 && rv < 170)return kTRUE;   
+
   // Andreas' Cuts
-  if (TMath::Abs(eta) < 1. && rv < 170)return kTRUE;   
+  //  if (TMath::Abs(eta) < 1. && rv < 170)return kTRUE;   
+
+
 
   // Muon arm
   if(eta > -4.2 && eta < -2.3 && zv > -500.)return kTRUE; // Muon arms
@@ -272,3 +482,14 @@ Bool_t AliAnalysisTaskMCParticleFilter::Select(TParticle* part, Float_t rv, Floa
  
 }
 
+void AliAnalysisTaskMCParticleFilter::PrintMCParticle(const AliMCParticle *mcp,Int_t np){
+  
+  const TParticle *p = mcp->Particle();
+  Printf("Nr.%d --- Status %d ---- Mother1 %d Mother2 %d Daughter1 %d Daughte\
+r2 %d ",
+        np,p->GetStatusCode(),p->GetMother(0),p->GetMother(1),p->GetDaughter \
+        (0),p->GetDaughter(1));
+  Printf("Eta %3.3f Phi %3.3f ",p->Eta(),p->Phi());
+  p->Print();
+  Printf("---------------------------------------");
+}