* about the suitability of this software for any purpose. It is *
* provided "as is" without express or implied warranty. *
**************************************************************************/
-
/* $Id$ */
-
+/** @file AliFMDRawWriter.cxx
+ @author Christian Holm Christensen <cholm@nbi.dk>
+ @date Mon Mar 27 12:45:56 2006
+ @brief Class to write raw data
+*/
//____________________________________________________________________
//
// Class to write ADC values to a raw data file
// ALTRO format. See the Exec member function for more information on
// that format.
//
-#include <AliLog.h> // ALILOG_H
+// #include <AliLog.h> // ALILOG_H
+#include "AliFMDDebug.h" // Better debug macros
#include <AliLoader.h> // ALILOADER_H
-#include <AliAltroBuffer.h> // ALIALTROBUFFER_H
+#include <AliAltroBufferV3.h> // ALIALTROBUFFER_H
#include "AliFMD.h" // ALIFMD_H
#include "AliFMDParameters.h" // ALIFMDPARAMETERS_H
#include "AliFMDDigit.h" // ALIFMDDIGIT_H
#include "AliFMDRawWriter.h" // ALIFMDRAWREADER_H
#include "AliFMDAltroMapping.h" // ALIFMDALTROMAPPING_H
-#include "AliFMDAltroIO.h" // ALIFMDALTROWRITER_H
+// #include "AliFMDAltroIO.h" // ALIFMDALTROWRITER_H
#include <TArrayI.h> // ROOT_TArrayI
+#include <TArrayF.h> // ROOT_TArrayI
+#include <TArrayC.h> // ROOT_TArrayI
#include <TClonesArray.h> // ROOT_TClonesArray
-#include <fstream>
+#include <TTree.h>
+// #include <fstream>
+#include "AliDAQ.h"
//____________________________________________________________________
ClassImp(AliFMDRawWriter)
//____________________________________________________________________
AliFMDRawWriter::AliFMDRawWriter(AliFMD* fmd)
: TTask("FMDRawWriter", "Writer of Raw ADC values from the FMD"),
- fFMD(fmd)
+ fFMD(fmd),
+ fSampleRate(0),
+ fChannelsPerAltro(0),
+ fThreshold(0)
{
- AliFMDParameters* pars = AliFMDParameters::Instance();
- fSampleRate = pars->GetSampleRate(AliFMDParameters::kBaseDDL);
- fChannelsPerAltro = pars->GetChannelsPerAltro();
+ // CTOR
+ AliFMDDebug(5, ("Created AliFMDRawWriter object"));
}
+
//____________________________________________________________________
void
AliFMDRawWriter::Exec(Option_t*)
// 10-bit word, and the samples are grouped into 40-bit blocks
//
// +------------------------------------+
- // | S(n) | S(n-1) | S(n-2) | S(n-3) |
+ // | S(1) | S(2) | S(3) | S(4) |
// | ... | ... | ... | ... |
- // | S(2) | S(1) | AA | AA |
+ // | S(n) | T(n) | n+2 | 2AA |
// +------------------------------------+
// Counts + possible filler
//
// words, packed into 40-bits.
//
// +------------------------------------+
- // | # words | start | sector | ring |
+ // | 2AAA | Len | A | Address |
// +------------------------------------+
// Trailer
//
// Note, that this method assumes that the digits are ordered.
//
AliLoader* loader = fFMD->GetLoader();
- loader->LoadDigits();
+ loader->LoadDigits("READ");
TTree* digitTree = loader->TreeD();
if (!digitTree) {
- Error("Digits2Raw", "no digit tree");
+ AliError("no digit tree");
return;
}
- TClonesArray* digits = new TClonesArray("AliFMDDigit", 1000);
fFMD->SetTreeAddress();
- TBranch* digitBranch = digitTree->GetBranch(fFMD->GetName());
- if (!digitBranch) {
- Error("Digits2Raw", "no branch for %s", fFMD->GetName());
- return;
- }
- digitBranch->SetAddress(&digits);
+ TClonesArray* digits = fFMD->Digits();
+ // new TClonesArray("AliFMDDigit", 1000);
+ // TBranch* digitBranch = digitTree->GetBranch(fFMD->GetName());
+ // if (!digitBranch) {
+ // AliError(Form("no branch for %s", fFMD->GetName()));
+ // return;
+ // }
+ // digitBranch->SetAddress(&digits);
Int_t nEvents = Int_t(digitTree->GetEntries());
+ AliFMDDebug(5, ("Got a total of %5d events from tree", nEvents));
for (Int_t event = 0; event < nEvents; event++) {
fFMD->ResetDigits();
digitTree->GetEvent(event);
WriteDigits(digits);
}
loader->UnloadDigits();
+ //delete digits;
}
+#if 1
+//____________________________________________________________________
+Long_t
+AliFMDRawWriter::WriteDigits(TClonesArray* digits)
+{
+ // WRite an array of digits to disk file
+ Int_t nDigits = digits->GetEntries();
+ if (nDigits < 1) return 0;
+ AliFMDDebug(5, ("Got a total of %5d digits from tree", nDigits));
+
+ AliFMDParameters* pars = AliFMDParameters::Instance();
+ UShort_t threshold = 0;
+ UInt_t prevddl = 0xFFFF;
+ UInt_t prevaddr = 0xFFF;
+ // UShort_t prevStrip = 0;
+
+ // Which channel number in the ALTRO channel we're at
+ UShort_t nWords = 0;
+ UShort_t preSamples = 0;
+ UShort_t sampleRate = 0;
+
+ // A buffer to hold 1 ALTRO channel - Normally, one ALTRO channel
+ // holds 128 VA1_ALICE channels, sampled at a rate of `sampleRate'
+ TArrayI data(pars->GetChannelsPerAltro() * 8);
+ TArrayF peds(pars->GetChannelsPerAltro() * 8);
+ TArrayF noise(pars->GetChannelsPerAltro() * 8);
+
+ // The Altro buffer
+ AliAltroBufferV3* altro = 0;
+
+ Int_t totalWords = 0;
+ Int_t nCounts = 0;
+ Long_t nBits = 0;
+
+ // Loop over the digits in the event. Note, that we assume the
+ // the digits are in order in the branch. If they were not, we'd
+ // have to cache all channels before we could write the data to
+ // the ALTRO buffer, or we'd have to set up a map of the digits.
+ UShort_t oldDet = 1000;
+ for (Int_t i = 0; i < nDigits; i++) {
+ // Get the digit
+ AliFMDDigit* digit = static_cast<AliFMDDigit*>(digits->At(i));
+ UShort_t det = digit->Detector();
+ Char_t ring = digit->Ring();
+ UShort_t sector = digit->Sector();
+ UShort_t strip = digit->Strip();
+ UShort_t ddl, addr, time;
+
+ AliFMDDebug(15, ("Processing digit # %5d FMD%d%c[%2d,%3d]",
+ i, det, ring, sector, strip));
+ threshold = pars->GetZeroSuppression(det, ring, sector, strip);
+ sampleRate = pars->GetSampleRate(det, ring, sector, strip);
+ preSamples = pars->GetPreSamples(det, ring, sector, strip);
+
+ if (det != oldDet) {
+ AliFMDDebug(5, ("Got new detector: %d (was %d)", det, oldDet));
+ oldDet = det;
+ }
+ AliFMDDebug(15, ("Sample rate is %d", sampleRate));
+
+ for (UShort_t j = 0; j < sampleRate; j++) {
+ if (!pars->Detector2Hardware(det,ring,sector,strip,j,ddl,addr,time)){
+ AliError(Form("Failed to get hardware address for FMD%d%c[%2d,%3d]-%d",
+ det, ring, sector, strip, j));
+ continue;
+ }
+
+ AliFMDDebug(10, ("FMD%d%c[%2d,%3d]-%d-> 0x%x/0x%x/%04d",
+ det, ring, sector, strip, j, ddl, addr, time));
+ if (addr != prevaddr) {
+ // Flush a channel to output
+ AliFMDDebug(5, ("Now hardware address 0x%x from FMD%d%c[%2d,%3d]-%d"
+ "(b: 0x%02x, a: 0x%01x, c: 0x%02x, t: %04d), "
+ "flushing old channel at 0x%x with %d words",
+ addr, det, ring, sector, strip, j,
+ (addr >> 7), (addr >> 4) & 0x7, addr & 0xf,
+ time, prevaddr, nWords));
+ totalWords += nWords;
+ ZeroSuppress(data.fArray, nWords, peds.fArray, noise.fArray, threshold);
+ if (altro)
+ /*nBits+=*/altro->WriteChannel(prevaddr,nWords,data.fArray,threshold);
+ data.Reset(-1);
+ peds.Reset(0);
+ noise.Reset(0);
+ nWords = 0;
+ prevaddr = addr;
+ }
+ if (ddl != prevddl) {
+ AliFMDDebug(10, ("FMD: New DDL, was %d, now %d", prevddl, ddl));
+ // If an altro exists, delete the object, flushing the data to
+ // disk, and closing the file.
+ if (altro) {
+ // When the first argument is false, we write the real
+ // header.
+ AliFMDDebug(15, ("Closing output"));
+ /* nBits += */ altro->Flush();
+ /* nBits += */ altro->WriteDataHeader(kFALSE, kFALSE);
+ delete altro;
+ altro = 0;
+ }
+ prevddl = ddl;
+ // Need to open a new DDL!
+ TString filename(AliDAQ::DdlFileName(fFMD ? fFMD->GetName() : "FMD", ddl));
+ AliFMDDebug(5, ("New altro buffer with DDL file %s", filename.Data()));
+ // Create a new altro buffer - a `1' as the second argument
+ // means `write mode'
+ altro = new AliAltroBufferV3(filename.Data());
+ altro->SetMapping(pars->GetAltroMap());
+ // Write a dummy (first argument is true) header to the DDL
+ // file - later on, when we close the file, we write the real
+ // header
+ altro->WriteDataHeader(kTRUE, kFALSE);
+ }
+
+ // Get the pedestal value
+ peds[time] = pars->GetPedestal(det, ring, sector, strip);
+ noise[time] = pars->GetPedestalWidth(det, ring, sector, strip);
+
+ // Store the counts of the ADC in the channel buffer
+ AliFMDDebug(15, ("Storing FMD%d%c[%02d,%03d]-%d in timebin %d (%d)",
+ det, ring, sector, strip, j, time, preSamples));
+ data[time] = digit->Count(j);
+ nWords++;
+ nCounts++;
+ if (time == preSamples) {
+ AliFMDDebug(15, ("Filling in %4d for %d presamples",
+ data[time], preSamples));
+ for (int k = 0; k < preSamples; k++) {
+ peds[k] = peds[time];
+ noise[k] = noise[time];
+ data[k] = data[time];
+ }
+ nWords += preSamples;
+ }
+ }
+ }
+ // Finally, we need to close the final ALTRO buffer if it wasn't
+ // already
+ if (altro) {
+ ZeroSuppress(data.fArray, nWords, peds.fArray, noise.fArray, threshold);
+ if (nWords > 0)
+ /* nBits += */ altro->WriteChannel(prevaddr,nWords,data.fArray,threshold);
+ /* nBits += */ altro->Flush();
+ /* nBits += */ altro->WriteDataHeader(kFALSE, kFALSE);
+ delete altro;
+ }
+ AliFMDDebug(5, ("Wrote a total of %d words in %ld bytes for %d counts",
+ nWords, nBits / 8, nCounts));
+ return nBits;
+}
+//____________________________________________________________________
+void
+AliFMDRawWriter::ZeroSuppress(Int_t*& data, Int_t nWords,
+ const Float_t* peds,
+ const Float_t* noise, UShort_t threshold) const
+{
+ // Simulate the ALTRO zero-suppression filter. The data passed in
+ // the first array is modified, such that all suppressed channels
+ // are set to some value below threshold.
+ //
+ // If threshold == 0 zero suppression is considered disabled, and no
+ // action is taken.
+ if (threshold <= 0) return;
+
+ // const Short_t width = 3;
+ // If fPedSubtract is false, compare data-(ped+f*noise), if true
+ // always modify data by -(ped+f*noise), and force negative values
+ // to zero.
+ Bool_t pedSubtract = AliFMDParameters::Instance()->IsZSPedSubtract();
+ UShort_t pre = AliFMDParameters::Instance()->GetZSPreSamples();
+ UShort_t post = AliFMDParameters::Instance()->GetZSPostSamples();
+ Float_t factor = AliFMDParameters::Instance()->GetPedestalFactor();
+
+ TArrayC mask(nWords+1);
+ for (Short_t i = 0; i < nWords; i++) {
+ Float_t val = data[i] - peds[i] - factor * noise[i];
+ if (val < 0.5) val = 0;
+ if (pedSubtract) data[i] = Int_t(val) & 0x3FF;
+
+ mask[i] = (val > threshold ? 1 : 0);
+ AliFMDDebug(10, ("Comparing sample %d %d-%f-%f*%f=%f to %d -> %s",
+ i, data[i], peds[i], factor, noise[i], val, threshold,
+ (mask[i] ? "above" : "below")));
+ }
+
+ for (Short_t i = 0; i < nWords; i++) {
+ if (mask[i]) { // Signal above, so do nothing
+ AliFMDDebug(10, ("Sample %d, above", i));
+ if (i < nWords-1 && !mask[i+1]) {
+ // After a valid sample. Increase the pointer to the next
+ // possible data, thereby skipping over the post-samples
+ AliFMDDebug(10, ("At sample %d, next is below, skipping %d to %d",
+ i, post, i+post));
+ i += post;
+ }
+ continue;
+ }
+
+ Short_t lookahead = TMath::Min(Short_t(nWords), Short_t(i+pre));
+ AliFMDDebug(10, ("Sample %d, below, look to %d", i, lookahead));
+ if (mask[lookahead] && pre > 0) {
+ AliFMDDebug(10, ("Sample %d is a pre-sample to %d", i, lookahead));
+ // We're in a presample, so don't modify the data, and increase
+ // counter by the number of pre-samples
+ i += pre-1;
+ continue;
+ }
+
+ // This sample must be surpressed
+ data[i] = threshold - 1;
+ }
+}
+
+#else
//____________________________________________________________________
void
AliFMDRawWriter::WriteDigits(TClonesArray* digits)
{
+ //
+ // Write digits to file
+ //
Int_t nDigits = digits->GetEntries();
if (nDigits < 1) return;
det, ring, sector, strip));
continue;
}
- AliDebug(40, Form("Got DDL=%d and address=%d from FMD%d%c[%2d,%3d]",
+ AliFMDDebug(40, ("Got DDL=%d and address=%d from FMD%d%c[%2d,%3d]",
thisDDL, thisHwaddr, det, ring, sector, strip));
// Check if we're still in the same channel
if (thisHwaddr != hwaddr) {
- AliDebug(30, Form("Now hardware address 0x%x from FMD%d%c[%2d,%3d] "
+ AliFMDDebug(30, ("Now hardware address 0x%x from FMD%d%c[%2d,%3d] "
"(board 0x%x, chip 0x%x, channel 0x%x)",
thisHwaddr, det, ring, sector, strip,
(thisHwaddr >> 7), (thisHwaddr >> 4) & 0x7,
// Check if we're still in the same detector (DDL)
if (ddl != thisDDL) {
if (writer) {
- AliDebug(1, Form("Closing altro writer %p", writer));
+ AliFMDDebug(1, ("Closing altro writer %p", writer));
if ((ret = writer->Close()) < 0) {
AliError(Form("Error: %s", writer->ErrorString(ret)));
return;
// If we haven't got a writer (either because none were made so
// far, or because we've switch DDL), make one.
if (!writer) {
- AliDebug(1, Form("Opening new ALTRO writer w/file FMD_%d.ddl", ddl));
- file = new std::ofstream(Form("FMD_%d.ddl", ddl));
+ AliFMDDebug(1, ("Opening new ALTRO writer w/file %s",
+ AliDAQ::DdlFileName("FMD",ddl)));
+ file = new std::ofstream(AliDAQ::DdlFileName("FMD",ddl));
if (!file || !*file) {
- AliFatal(Form("Failed to open file FMD_%d.ddl", ddl));
+ AliFatal(Form("Failed to open file %s",
+ AliDAQ::DdlFileName("FMD",ddl)));
return;
}
writer = new AliFMDAltroWriter(*file);
writer->SetThreshold(pars->GetZeroSuppression(det, ring, sector, strip));
- sampleRate = pars->GetSampleRate(ddl);
}
// Write out our signal
+ sampleRate = pars->GetSampleRate(det,ring,sector,strip);
writer->AddSignal(digit->Count1());
if (sampleRate >= 2) writer->AddSignal(digit->Count2());
if (sampleRate >= 3) writer->AddSignal(digit->Count3());
delete file;
}
}
-
-
-
-#if 0
-//____________________________________________________________________
-void
-AliFMDRawWriter::WriteDigits(TClonesArray* digits)
-{
- Int_t nDigits = digits->GetEntries();
- if (nDigits < 1) return;
-
- AliFMDParameters* pars = AliFMDParameters::Instance();
- UShort_t prevDetector = 0;
- Char_t prevRing = '\0';
- UShort_t prevSector = 0;
- // UShort_t prevStrip = 0;
-
- // The first seen strip number for a channel
- UShort_t startStrip = 0;
-
- // Which channel number in the ALTRO channel we're at
- UShort_t offset = 0;
-
- // How many times the ALTRO Samples one VA1_ALICE channel
- Int_t sampleRate = 1;
-
- // A buffer to hold 1 ALTRO channel - Normally, one ALTRO channel
- // holds 128 VA1_ALICE channels, sampled at a rate of `sampleRate'
- TArrayI channel(fChannelsPerAltro * sampleRate);
-
- // The Altro buffer
- AliAltroBuffer* altro = 0;
-
- // Loop over the digits in the event. Note, that we assume the
- // the digits are in order in the branch. If they were not, we'd
- // have to cache all channels before we could write the data to
- // the ALTRO buffer, or we'd have to set up a map of the digits.
- for (Int_t i = 0; i < nDigits; i++) {
- // Get the digit
- AliFMDDigit* digit = static_cast<AliFMDDigit*>(digits->At(i));
-
- UShort_t det = digit->Detector();
- Char_t ring = digit->Ring();
- UShort_t sector = digit->Sector();
- UShort_t strip = digit->Strip();
- fThreshold = pars->GetZeroSuppression(det, ring, sector, strip);
- if (det != prevDetector) {
- AliDebug(15, Form("FMD: New DDL, was %d, now %d",
- AliFMDParameters::kBaseDDL + prevDetector - 1,
- AliFMDParameters::kBaseDDL + det - 1));
- // If an altro exists, delete the object, flushing the data to
- // disk, and closing the file.
- if (altro) {
- // When the first argument is false, we write the real
- // header.
- AliDebug(15, Form("New altro: Write channel at %d Strip: %d "
- "Sector: %d Ring: %d",
- i, startStrip, prevSector, prevRing));
- // TPC to FMD translations
- //
- // TPC FMD
- // ----------+-----------
- // pad | strip
- // row | sector
- // sector | ring
- //
- WriteChannel(altro, startStrip, prevSector, prevRing, channel);
- altro->Flush();
- altro->WriteDataHeader(kFALSE, kFALSE);
- delete altro;
- altro = 0;
- }
- prevDetector = det;
- // Need to open a new DDL!
- Int_t ddlId = AliFMDParameters::kBaseDDL + det - 1;
- TString filename(Form("%s_%d.ddl", fFMD->GetName(), ddlId));
-
- AliDebug(15, Form("New altro buffer with DDL file %s",
- filename.Data()));
- AliDebug(15, Form("New altro at %d", i));
- // Create a new altro buffer - a `1' as the second argument
- // means `write mode'
- altro = new AliAltroBuffer(filename.Data(), 1);
- altro->SetMapping(pars->GetAltroMap());
-
- // Write a dummy (first argument is true) header to the DDL
- // file - later on, when we close the file, we write the real
- // header
- altro->WriteDataHeader(kTRUE, kFALSE);
-
- // Figure out the sample rate
- if (fSampleRate > 0) sampleRate = fSampleRate;
- else {
- if (digit->Count2() >= 0) sampleRate = 2;
- if (digit->Count3() >= 0) sampleRate = 3;
- }
-
- channel.Set(fChannelsPerAltro * sampleRate);
- offset = 0;
- prevRing = ring;
- prevSector = sector;
- startStrip = strip;
- }
- else if (offset == fChannelsPerAltro
- || digit->Ring() != prevRing
- || digit->Sector() != prevSector) {
- // Force a new Altro channel
- AliDebug(15, Form("Flushing channel to disk because %s",
- (offset == fChannelsPerAltro ? "channel is full" :
- (ring != prevRing ? "new ring up" :
- "new sector up"))));
- AliDebug(15, Form("New Channel: Write channel at %d Strip: %d "
- "Sector: %d Ring: %d",
- i, startStrip, prevSector, prevRing));
- WriteChannel(altro, startStrip, prevSector, prevRing, channel);
- // Reset and update channel variables
- channel.Reset(0);
- offset = 0;
- startStrip = strip;
- prevRing = ring;
- prevSector = sector;
- }
-
- // Store the counts of the ADC in the channel buffer
- channel[offset * sampleRate] = digit->Count1();
- if (sampleRate > 1)
- channel[offset * sampleRate + 1] = digit->Count2();
- if (sampleRate > 2)
- channel[offset * sampleRate + 2] = digit->Count3();
- offset++;
- }
- // Finally, we need to close the final ALTRO buffer if it wasn't
- // already
- if (altro) {
- altro->Flush();
- altro->WriteDataHeader(kFALSE, kFALSE);
- delete altro;
- }
-}
#endif
-//____________________________________________________________________
-void
-AliFMDRawWriter::WriteChannel(AliAltroBuffer* altro,
- UShort_t strip, UShort_t sector, Char_t ring,
- const TArrayI& data)
-{
- // Write out one ALTRO channel to the data file.
- // Derived classes can overload this method to use a per-ALTRO
- // threshold. This implementation uses the common threshold set by
- // SetThreshold.
- altro->WriteChannel(Int_t(strip),
- Int_t(sector),
- Int_t((ring == 'I' ? 0 : 1)),
- data.fN, data.fArray, fThreshold);
-}
//
// EOF
//
+
git://git.uio.no / u / mrichter / AliRoot.git / blobdiff