/* $Id$ */
+/* History of cvs commits:
+ *
+ * $Log$
+ * Revision 1.113 2007/08/07 14:12:03 kharlov
+ * Quality assurance added (Yves Schutz)
+ *
+ * Revision 1.112 2007/07/11 13:43:30 hristov
+ * New class AliESDEvent, backward compatibility with the old AliESD (Christian)
+ *
+ * Revision 1.111 2007/05/04 14:49:29 policheh
+ * AliPHOSRecPoint inheritance from AliCluster
+ *
+ * Revision 1.110 2007/04/24 10:08:03 kharlov
+ * Vertex extraction from GenHeader
+ *
+ * Revision 1.109 2007/04/18 09:34:05 kharlov
+ * Geometry bug fixes
+ *
+ * Revision 1.108 2007/04/16 09:03:37 kharlov
+ * Incedent angle correction fixed
+ *
+ * Revision 1.107 2007/04/02 15:00:16 cvetan
+ * No more calls to gAlice in the reconstruction
+ *
+ * Revision 1.106 2007/04/01 15:40:15 kharlov
+ * Correction for actual vertex position implemented
+ *
+ * Revision 1.105 2007/03/06 06:57:46 kharlov
+ * DP:calculation of distance to CPV done in TSM
+ *
+ * Revision 1.104 2006/12/15 10:46:26 hristov
+ * Using TMath::Abs instead of fabs
+ *
+ * Revision 1.103 2006/09/07 18:31:08 kharlov
+ * Effective c++ corrections (T.Pocheptsov)
+ *
+ * Revision 1.102 2006/01/23 17:51:48 hristov
+ * Using the recommended way of forward declarations for TVector and TMatrix (see v5-08-00 release notes). Additional clean-up
+ *
+ * Revision 1.101 2005/05/28 14:19:04 schutz
+ * Compilation warnings fixed by T.P.
+ *
+ */
+
//_________________________________________________________________________
// Implementation version v1 of the PHOS particle identifier
// Particle identification based on the
-// - CPV information,
-// - Preshower information (in MIXT or GPS2 geometries)
-// - shower width.
-//
-// CPV or Preshower clusters should be closer in PHOS plane than fCpvEmcDistance (in cm).
-// This parameter can be set by method SetCpvtoEmcDistanceCut(Float_t cut)
+// - RCPV: distance from CPV recpoint to EMCA recpoint.
+// - TOF
+// - PCA: Principal Components Analysis..
+// The identified particle has an identification number corresponding
+// to a 9 bits number:
+// -Bit 0 to 2: bit set if RCPV > CpvEmcDistance (each bit corresponds
+// to a different efficiency-purity point of the photon identification)
+// -Bit 3 to 5: bit set if TOF < TimeGate (each bit corresponds
+// to a different efficiency-purity point of the photon identification)
+// -Bit 6 to 9: bit set if Principal Components are
+// inside an ellipse defined by the parameters a, b, c, x0 and y0.
+// (each bit corresponds to a different efficiency-purity point of the
+// photon identification)
+// The PCA (Principal components analysis) needs a file that contains
+// a previous analysis of the correlations between the particles. This
+// file is $ALICE_ROOT/PHOS/PCA8pa15_0.5-100.root. Analysis done for
+// energies between 0.5 and 100 GeV.
+// A calibrated energy is calculated. The energy of the reconstructed
+// cluster is corrected with the formula A + B * E + C * E^2, whose
+// parameters where obtained through the study of the reconstructed
+// energy distribution of monoenergetic photons.
//
-// One can set desirable ID method by the function SetIdentificationMethod(option).
-// Presently the following options can be used together or separately :
-// - "disp": use dispersion cut on shower width
-// (width can be set by method SetDispersionCut(Float_t cut)
-// - "ell" : use cut on the axis of the ellipse, drawn around shower
-// (this cut can be changed by SetShowerProfileCut(char* formula),
-// where formula - any function of two variables f(lambda[0],lambda[1]).
-// Shower is considered as EM if f() > 0 )
-// One can visualize current cuts calling method PlotDispersionCuts().
+// All the parameters (RCPV(2 rows-3 columns),TOF(1r-3c),PCA(5r-4c)
+// and calibration(1r-3c))are stored in a file called
+// $ALICE_ROOT/PHOS/Parameters.dat. Each time that AliPHOSPIDv1 is
+// initialized, this parameters are copied to a Matrix (9,4), a
+// TMatrixD object.
//
// use case:
-// root [0] AliPHOSPIDv1 * p1 = new AliPHOSPIDv1("galice.root")
+// root [0] AliPHOSPIDv1 * p = new AliPHOSPIDv1("galice1.root")
// Warning in <TDatabasePDG::TDatabasePDG>: object already instantiated
-// root [1] p1->SetIdentificationMethod("disp ellipse")
-// root [2] p1->ExecuteTask()
-// root [3] AliPHOSPIDv1 * p2 = new AliPHOSPIDv1("galice1.root","ts1")
-// Warning in <TDatabasePDG::TDatabasePDG>: object already instantiated
-// // reading headers from file galice1.root and TrackSegments
-// // with title "ts1"
-// root [4] p2->SetRecParticlesBranch("rp1")
-// // set file name for the branch RecParticles
-// root [5] p2->ExecuteTask("deb all time")
-// // available options
-// // "deb" - prints # of reconstructed particles
-// // "deb all" - prints # and list of RecParticles
-// // "time" - prints benchmarking results
+// // reading headers from file galice1.root and create RecParticles
+ // TrackSegments and RecPoints are used
+// // set file name for the branch RecParticles
+// root [1] p->ExecuteTask("deb all time")
+// // available options
+// // "deb" - prints # of reconstructed particles
+// // "deb all" - prints # and list of RecParticles
+// // "time" - prints benchmarking results
//
-//*-- Author: Yves Schutz (SUBATECH) & Gines Martinez (SUBATECH) &
-// Dmitri Peressounko (SUBATECH & Kurchatov Institute)
-// Completely redesined by Dmitri Peressounko, March 2001
+// root [2] AliPHOSPIDv1 * p2 = new AliPHOSPIDv1("galice1.root","v1",kTRUE)
+// Warning in <TDatabasePDG::TDatabasePDG>: object already instantiated
+// //Split mode.
+// root [3] p2->ExecuteTask()
+//
+
+//*-- Author: Yves Schutz (SUBATECH) & Gines Martinez (SUBATECH) &
+// Gustavo Conesa April 2002
+// PCA redesigned by Gustavo Conesa October 2002:
+// The way of using the PCA has changed. Instead of 2
+// files with the PCA, each one with different energy ranges
+// of application, we use the wide one (0.5-100 GeV), and instead
+// of fixing 3 ellipses for different ranges of energy, it has been
+// studied the dependency of the ellipses parameters with the
+// energy, and they are implemented in the code as a funtion
+// of the energy.
+//
+//
+//
// --- ROOT system ---
-#include "TROOT.h"
-#include "TTree.h"
-#include "TFile.h"
-#include "TF2.h"
+
+
+// --- Standard library ---
+#include <TMatrixF.h>
#include "TFormula.h"
-#include "TCanvas.h"
-#include "TFolder.h"
-#include "TSystem.h"
#include "TBenchmark.h"
-// --- Standard library ---
-
-#include <iostream.h>
-#include <iomanip.h>
+#include "TPrincipal.h"
+#include "TFile.h"
+#include "TSystem.h"
// --- AliRoot header files ---
-
-#include "AliRun.h"
-#include "AliGenerator.h"
+ //#include "AliLog.h"
#include "AliPHOS.h"
#include "AliPHOSPIDv1.h"
-#include "AliPHOSClusterizerv1.h"
+#include "AliESDEvent.h"
+#include "AliESDVertex.h"
#include "AliPHOSTrackSegment.h"
-#include "AliPHOSTrackSegmentMakerv1.h"
+#include "AliPHOSEmcRecPoint.h"
#include "AliPHOSRecParticle.h"
-#include "AliPHOSGeometry.h"
-#include "AliPHOSGetter.h"
ClassImp( AliPHOSPIDv1)
//____________________________________________________________________________
-AliPHOSPIDv1::AliPHOSPIDv1():AliPHOSPID()
+AliPHOSPIDv1::AliPHOSPIDv1() :
+ AliPHOSPID(),
+ fBayesian(kFALSE),
+ fDefaultInit(kFALSE),
+ fWrite(kFALSE),
+ fFileNamePrincipalPhoton(),
+ fFileNamePrincipalPi0(),
+ fFileNameParameters(),
+ fPrincipalPhoton(0),
+ fPrincipalPi0(0),
+ fX(0),
+ fPPhoton(0),
+ fPPi0(0),
+ fParameters(0),
+ fVtx(0.),
+ fTFphoton(0),
+ fTFpiong(0),
+ fTFkaong(0),
+ fTFkaonl(0),
+ fTFhhadrong(0),
+ fTFhhadronl(0),
+ fDFmuon(0),
+ fERecWeight(0),
+ fChargedNeutralThreshold(0.),
+ fTOFEnThreshold(0),
+ fDispEnThreshold(0),
+ fDispMultThreshold(0)
{
// default ctor
- fFormula = 0 ;
- fDispersion = 0. ;
- fCpvEmcDistance = 0 ;
- fTimeGate = 2.e-9 ;
- fHeaderFileName = "" ;
- fTrackSegmentsTitle= "" ;
- fRecPointsTitle = "" ;
- fRecParticlesTitle = "" ;
- fIDOptions = "dis time" ;
- fRecParticlesInRun = 0 ;
- fClusterizer = 0;
- fTSMaker = 0;
+
+ InitParameters() ;
+ fDefaultInit = kTRUE ;
}
//____________________________________________________________________________
-AliPHOSPIDv1::AliPHOSPIDv1(const char * headerFile,const char * name) : AliPHOSPID(headerFile, name)
+AliPHOSPIDv1::AliPHOSPIDv1(const AliPHOSPIDv1 & pid ) :
+ AliPHOSPID(pid),
+ fBayesian(kFALSE),
+ fDefaultInit(kFALSE),
+ fWrite(kFALSE),
+ fFileNamePrincipalPhoton(),
+ fFileNamePrincipalPi0(),
+ fFileNameParameters(),
+ fPrincipalPhoton(0),
+ fPrincipalPi0(0),
+ fX(0),
+ fPPhoton(0),
+ fPPi0(0),
+ fParameters(0),
+ fVtx(0.),
+ fTFphoton(0),
+ fTFpiong(0),
+ fTFkaong(0),
+ fTFkaonl(0),
+ fTFhhadrong(0),
+ fTFhhadronl(0),
+ fDFmuon(0),
+ fERecWeight(0),
+ fChargedNeutralThreshold(0.),
+ fTOFEnThreshold(0),
+ fDispEnThreshold(0),
+ fDispMultThreshold(0)
+
{
- //ctor with the indication on where to look for the track segments
+ // ctor
+ InitParameters() ;
- fFormula = new TFormula("LambdaCuts","(x>1)*(x<2.5)*(y>0)*(y<x)") ;
- fDispersion = 2.0 ;
- fCpvEmcDistance = 3.0 ;
- fTimeGate = 2.e-9 ;
-
- fHeaderFileName = GetTitle() ;
- fTrackSegmentsTitle = GetName() ;
- fRecPointsTitle = GetName() ;
- fRecParticlesTitle = GetName() ;
- fIDOptions = "dis time" ;
-
- TString tempo(GetName()) ;
- tempo.Append(":") ;
- tempo.Append(Version()) ;
- SetName(tempo) ;
- fRecParticlesInRun = 0 ;
+}
- Init() ;
+//____________________________________________________________________________
+AliPHOSPIDv1::AliPHOSPIDv1(AliPHOSGeometry *geom):
+ AliPHOSPID(geom),
+ fBayesian(kFALSE),
+ fDefaultInit(kFALSE),
+ fWrite(kFALSE),
+ fFileNamePrincipalPhoton(),
+ fFileNamePrincipalPi0(),
+ fFileNameParameters(),
+ fPrincipalPhoton(0),
+ fPrincipalPi0(0),
+ fX(0),
+ fPPhoton(0),
+ fPPi0(0),
+ fParameters(0),
+ fVtx(0.),
+ fTFphoton(0),
+ fTFpiong(0),
+ fTFkaong(0),
+ fTFkaonl(0),
+ fTFhhadrong(0),
+ fTFhhadronl(0),
+ fDFmuon(0),
+ fERecWeight(0),
+ fChargedNeutralThreshold(0.),
+ fTOFEnThreshold(0),
+ fDispEnThreshold(0),
+ fDispMultThreshold(0)
+{
+ //ctor with the indication on where to look for the track segments
+
+ InitParameters() ;
+ fDefaultInit = kFALSE ;
}
//____________________________________________________________________________
AliPHOSPIDv1::~AliPHOSPIDv1()
{
-}
+ // dtor
+ fPrincipalPhoton = 0;
+ fPrincipalPi0 = 0;
+ delete [] fX ; // Principal input
+ delete [] fPPhoton ; // Photon Principal components
+ delete [] fPPi0 ; // Pi0 Principal components
+ delete fParameters;
+ delete fTFphoton;
+ delete fTFpiong;
+ delete fTFkaong;
+ delete fTFkaonl;
+ delete fTFhhadrong;
+ delete fTFhhadronl;
+ delete fDFmuon;
+}
+
//____________________________________________________________________________
-Float_t AliPHOSPIDv1::GetDistance(AliPHOSEmcRecPoint * emc,AliPHOSRecPoint * cpv, Option_t * Axis)const
+void AliPHOSPIDv1::InitParameters()
{
- // Calculates the distance between the EMC RecPoint and the PPSD RecPoint
-
- const AliPHOSGeometry * geom = AliPHOSGetter::GetInstance()->PHOSGeometry() ;
- TVector3 vecEmc ;
- TVector3 vecCpv ;
+ // Initialize PID parameters
+ fWrite = kTRUE ;
+ fBayesian = kTRUE ;
+ SetParameters() ; // fill the parameters matrix from parameters file
+
+ // initialisation of response function parameters
+ // Tof
+
+// // Photons
+// fTphoton[0] = 0.218 ;
+// fTphoton[1] = 1.55E-8 ;
+// fTphoton[2] = 5.05E-10 ;
+// fTFphoton = new TFormula("ToF response to photons" , "gaus") ;
+// fTFphoton->SetParameters( fTphoton[0], fTphoton[1], fTphoton[2]) ;
+
+// // Pions
+// //Gaus (0 to max probability)
+// fTpiong[0] = 0.0971 ;
+// fTpiong[1] = 1.58E-8 ;
+// fTpiong[2] = 5.69E-10 ;
+// fTFpiong = new TFormula("ToF response to pions" , "gaus") ;
+// fTFpiong->SetParameters( fTpiong[0], fTpiong[1], fTpiong[2]) ;
+
+// // Kaons
+// //Gaus (0 to max probability)
+// fTkaong[0] = 0.0542 ;
+// fTkaong[1] = 1.64E-8 ;
+// fTkaong[2] = 6.07E-10 ;
+// fTFkaong = new TFormula("ToF response to kaon" , "gaus") ;
+// fTFkaong->SetParameters( fTkaong[0], fTkaong[1], fTkaong[2]) ;
+// //Landau (max probability to inf)
+// fTkaonl[0] = 0.264 ;
+// fTkaonl[1] = 1.68E-8 ;
+// fTkaonl[2] = 4.10E-10 ;
+// fTFkaonl = new TFormula("ToF response to kaon" , "landau") ;
+// fTFkaonl->SetParameters( fTkaonl[0], fTkaonl[1], fTkaonl[2]) ;
+
+// //Heavy Hadrons
+// //Gaus (0 to max probability)
+// fThhadrong[0] = 0.0302 ;
+// fThhadrong[1] = 1.73E-8 ;
+// fThhadrong[2] = 9.52E-10 ;
+// fTFhhadrong = new TFormula("ToF response to heavy hadrons" , "gaus") ;
+// fTFhhadrong->SetParameters( fThhadrong[0], fThhadrong[1], fThhadrong[2]) ;
+// //Landau (max probability to inf)
+// fThhadronl[0] = 0.139 ;
+// fThhadronl[1] = 1.745E-8 ;
+// fThhadronl[2] = 1.00E-9 ;
+// fTFhhadronl = new TFormula("ToF response to heavy hadrons" , "landau") ;
+// fTFhhadronl->SetParameters( fThhadronl[0], fThhadronl[1], fThhadronl[2]) ;
+
+ // Photons
+ fTphoton[0] = 7.83E8 ;
+ fTphoton[1] = 1.55E-8 ;
+ fTphoton[2] = 5.09E-10 ;
+ fTFphoton = new TFormula("ToF response to photons" , "gaus") ;
+ fTFphoton->SetParameters( fTphoton[0], fTphoton[1], fTphoton[2]) ;
+
+ // Pions
+ //Gaus (0 to max probability)
+ fTpiong[0] = 6.73E8 ;
+ fTpiong[1] = 1.58E-8 ;
+ fTpiong[2] = 5.87E-10 ;
+ fTFpiong = new TFormula("ToF response to pions" , "gaus") ;
+ fTFpiong->SetParameters( fTpiong[0], fTpiong[1], fTpiong[2]) ;
+
+ // Kaons
+ //Gaus (0 to max probability)
+ fTkaong[0] = 3.93E8 ;
+ fTkaong[1] = 1.64E-8 ;
+ fTkaong[2] = 6.07E-10 ;
+ fTFkaong = new TFormula("ToF response to kaon" , "gaus") ;
+ fTFkaong->SetParameters( fTkaong[0], fTkaong[1], fTkaong[2]) ;
+ //Landau (max probability to inf)
+ fTkaonl[0] = 2.0E9 ;
+ fTkaonl[1] = 1.68E-8 ;
+ fTkaonl[2] = 4.10E-10 ;
+ fTFkaonl = new TFormula("ToF response to kaon" , "landau") ;
+ fTFkaonl->SetParameters( fTkaonl[0], fTkaonl[1], fTkaonl[2]) ;
+
+ //Heavy Hadrons
+ //Gaus (0 to max probability)
+ fThhadrong[0] = 2.02E8 ;
+ fThhadrong[1] = 1.73E-8 ;
+ fThhadrong[2] = 9.52E-10 ;
+ fTFhhadrong = new TFormula("ToF response to heavy hadrons" , "gaus") ;
+ fTFhhadrong->SetParameters( fThhadrong[0], fThhadrong[1], fThhadrong[2]) ;
+ //Landau (max probability to inf)
+ fThhadronl[0] = 1.10E9 ;
+ fThhadronl[1] = 1.74E-8 ;
+ fThhadronl[2] = 1.00E-9 ;
+ fTFhhadronl = new TFormula("ToF response to heavy hadrons" , "landau") ;
+ fTFhhadronl->SetParameters( fThhadronl[0], fThhadronl[1], fThhadronl[2]) ;
+
+
+
+ // Shower shape: dispersion gaussian parameters
+ // Photons
- emc->GetLocalPosition(vecEmc) ;
- cpv->GetLocalPosition(vecCpv) ;
- if(emc->GetPHOSMod() == cpv->GetPHOSMod()){
-
- // Correct to difference in CPV and EMC position due to different distance to center.
- // we assume, that particle moves from center
- Float_t dCPV = geom->GetIPtoOuterCoverDistance();
- Float_t dEMC = geom->GetIPtoCrystalSurface() ;
- dEMC = dEMC / dCPV ;
- vecCpv = dEMC * vecCpv - vecEmc ;
- if (Axis == "X") return vecCpv.X();
- if (Axis == "Y") return vecCpv.Y();
- if (Axis == "Z") return vecCpv.Z();
- if (Axis == "R") return vecCpv.Mag();
- }
+// fDphoton[0] = 4.62e-2; fDphoton[1] = 1.39e-2 ; fDphoton[2] = -3.80e-2;//constant
+// fDphoton[3] = 1.53 ; fDphoton[4] =-6.62e-2 ; fDphoton[5] = 0.339 ;//mean
+// fDphoton[6] = 6.89e-2; fDphoton[7] =-6.59e-2 ; fDphoton[8] = 0.194 ;//sigma
+
+// fDpi0[0] = 0.0586 ; fDpi0[1] = 1.06E-3 ; fDpi0[2] = 0. ;//constant
+// fDpi0[3] = 2.67 ; fDpi0[4] =-2.00E-2 ; fDpi0[5] = 9.37E-5 ;//mean
+// fDpi0[6] = 0.153 ; fDpi0[7] = 9.34E-4 ; fDpi0[8] =-1.49E-5 ;//sigma
+
+// fDhadron[0] = 1.61E-2 ; fDhadron[1] = 3.03E-3 ; fDhadron[2] = 1.01E-2 ;//constant
+// fDhadron[3] = 3.81 ; fDhadron[4] = 0.232 ; fDhadron[5] =-1.25 ;//mean
+// fDhadron[6] = 0.897 ; fDhadron[7] = 0.0987 ; fDhadron[8] =-0.534 ;//sigma
+
+ fDphoton[0] = 1.5 ; fDphoton[1] = 0.49 ; fDphoton[2] =-1.7E-2 ;//constant
+ fDphoton[3] = 1.5 ; fDphoton[4] = 4.0E-2 ; fDphoton[5] = 0.21 ;//mean
+ fDphoton[6] = 4.8E-2 ; fDphoton[7] =-0.12 ; fDphoton[8] = 0.27 ;//sigma
+ fDphoton[9] = 16.; //for E> fDphoton[9] parameters calculated at fDphoton[9]
+
+ fDpi0[0] = 0.25 ; fDpi0[1] = 3.3E-2 ; fDpi0[2] =-1.0e-5 ;//constant
+ fDpi0[3] = 1.50 ; fDpi0[4] = 398. ; fDpi0[5] = 12. ;//mean
+ fDpi0[6] =-7.0E-2 ; fDpi0[7] =-524. ; fDpi0[8] = 22. ;//sigma
+ fDpi0[9] = 110.; //for E> fDpi0[9] parameters calculated at fDpi0[9]
+
+ fDhadron[0] = 6.5 ; fDhadron[1] =-5.3 ; fDhadron[2] = 1.5 ;//constant
+ fDhadron[3] = 3.8 ; fDhadron[4] = 0.23 ; fDhadron[5] =-1.2 ;//mean
+ fDhadron[6] = 0.88 ; fDhadron[7] = 9.3E-2 ; fDhadron[8] =-0.51 ;//sigma
+ fDhadron[9] = 2.; //for E> fDhadron[9] parameters calculated at fDhadron[9]
+
+ fDmuon[0] = 0.0631 ;
+ fDmuon[1] = 1.4 ;
+ fDmuon[2] = 0.0557 ;
+ fDFmuon = new TFormula("Shower shape response to muons" , "landau") ;
+ fDFmuon->SetParameters( fDmuon[0], fDmuon[1], fDmuon[2]) ;
+
+
+ // x(CPV-EMC) distance gaussian parameters
+
+// fXelectron[0] = 8.06e-2 ; fXelectron[1] = 1.00e-2; fXelectron[2] =-5.14e-2;//constant
+// fXelectron[3] = 0.202 ; fXelectron[4] = 8.15e-3; fXelectron[5] = 4.55 ;//mean
+// fXelectron[6] = 0.334 ; fXelectron[7] = 0.186 ; fXelectron[8] = 4.32e-2;//sigma
+
+// //charged hadrons gaus
+// fXcharged[0] = 6.43e-3 ; fXcharged[1] =-4.19e-5; fXcharged[2] = 1.42e-3;//constant
+// fXcharged[3] = 2.75 ; fXcharged[4] =-0.40 ; fXcharged[5] = 1.68 ;//mean
+// fXcharged[6] = 3.135 ; fXcharged[7] =-9.41e-2; fXcharged[8] = 1.31e-2;//sigma
+
+// // z(CPV-EMC) distance gaussian parameters
+
+// fZelectron[0] = 8.22e-2 ; fZelectron[1] = 5.11e-3; fZelectron[2] =-3.05e-2;//constant
+// fZelectron[3] = 3.09e-2 ; fZelectron[4] = 5.87e-2; fZelectron[5] =-9.49e-2;//mean
+// fZelectron[6] = 0.263 ; fZelectron[7] =-9.02e-3; fZelectron[8] = 0.151 ;//sigma
+
+// //charged hadrons gaus
+
+// fZcharged[0] = 1.00e-2 ; fZcharged[1] = 2.82E-4 ; fZcharged[2] = 2.87E-3 ;//constant
+// fZcharged[3] =-4.68e-2 ; fZcharged[4] =-9.21e-3 ; fZcharged[5] = 4.91e-2 ;//mean
+// fZcharged[6] = 1.425 ; fZcharged[7] =-5.90e-2 ; fZcharged[8] = 5.07e-2 ;//sigma
+
+
+ fXelectron[0] =-1.6E-2 ; fXelectron[1] = 0.77 ; fXelectron[2] =-0.15 ;//constant
+ fXelectron[3] = 0.35 ; fXelectron[4] = 0.25 ; fXelectron[5] = 4.12 ;//mean
+ fXelectron[6] = 0.30 ; fXelectron[7] = 0.11 ; fXelectron[8] = 0.16 ;//sigma
+ fXelectron[9] = 3.; //for E> fXelectron[9] parameters calculated at fXelectron[9]
+
+ //charged hadrons gaus
+ fXcharged[0] = 0.14 ; fXcharged[1] =-3.0E-2 ; fXcharged[2] = 0 ;//constant
+ fXcharged[3] = 1.4 ; fXcharged[4] =-9.3E-2 ; fXcharged[5] = 1.4 ;//mean
+ fXcharged[6] = 5.7 ; fXcharged[7] = 0.27 ; fXcharged[8] =-1.8 ;//sigma
+ fXcharged[9] = 1.2; //for E> fXcharged[9] parameters calculated at fXcharged[9]
+
+ // z(CPV-EMC) distance gaussian parameters
+
+ fZelectron[0] = 0.49 ; fZelectron[1] = 0.53 ; fZelectron[2] =-9.8E-2 ;//constant
+ fZelectron[3] = 2.8E-2 ; fZelectron[4] = 5.0E-2 ; fZelectron[5] =-8.2E-2 ;//mean
+ fZelectron[6] = 0.25 ; fZelectron[7] =-1.7E-2 ; fZelectron[8] = 0.17 ;//sigma
+ fZelectron[9] = 3.; //for E> fZelectron[9] parameters calculated at fZelectron[9]
+
+ //charged hadrons gaus
+
+ fZcharged[0] = 0.46 ; fZcharged[1] =-0.65 ; fZcharged[2] = 0.52 ;//constant
+ fZcharged[3] = 1.1E-2 ; fZcharged[4] = 0. ; fZcharged[5] = 0. ;//mean
+ fZcharged[6] = 0.60 ; fZcharged[7] =-8.2E-2 ; fZcharged[8] = 0.45 ;//sigma
+ fZcharged[9] = 1.2; //for E> fXcharged[9] parameters calculated at fXcharged[9]
+
+ //Threshold to differentiate between charged and neutral
+ fChargedNeutralThreshold = 1e-5;
+ fTOFEnThreshold = 2; //Maximum energy to use TOF
+ fDispEnThreshold = 0.5; //Minimum energy to use shower shape
+ fDispMultThreshold = 3; //Minimum multiplicity to use shower shape
+
+ //Weight to hadrons recontructed energy
+
+ fERecWeightPar[0] = 0.32 ;
+ fERecWeightPar[1] = 3.8 ;
+ fERecWeightPar[2] = 5.4E-3 ;
+ fERecWeightPar[3] = 5.6E-2 ;
+ fERecWeight = new TFormula("Weight for hadrons" , "[0]*exp(-x*[1])+[2]*exp(-x*[3])") ;
+ fERecWeight ->SetParameters(fERecWeightPar[0],fERecWeightPar[1] ,fERecWeightPar[2] ,fERecWeightPar[3]) ;
+
+
+ for (Int_t i =0; i< AliPID::kSPECIESN ; i++)
+ fInitPID[i] = 1.;
- return 100000000 ;
}
-//____________________________________________________________________________
-void AliPHOSPIDv1::Exec(Option_t * option)
+//________________________________________________________________________
+void AliPHOSPIDv1::TrackSegments2RecParticles(Option_t *option)
{
- //Steering method
-
- if( strcmp(GetName(), "")== 0 )
- Init() ;
+ // Steering method to perform particle reconstruction and identification
+ // for the event range from fFirstEvent to fLastEvent.
if(strstr(option,"tim"))
gBenchmark->Start("PHOSPID");
if(strstr(option,"print")) {
- Print("") ;
+ Print() ;
return ;
}
- gAlice->GetEvent(0) ;
- //check, if the branch with name of this" already exits?
- TObjArray * lob = (TObjArray*)gAlice->TreeR()->GetListOfBranches() ;
- TIter next(lob) ;
- TBranch * branch = 0 ;
- Bool_t phospidfound = kFALSE, pidfound = kFALSE ;
+ if(fTrackSegments && //Skip events, where no track segments made
+ fTrackSegments->GetEntriesFast()) {
+
+ GetVertex() ;
+ MakeRecParticles() ;
+
+ if(fBayesian)
+ MakePID() ;
+
+ if(strstr(option,"deb"))
+ PrintRecParticles(option) ;
+ }
+
+ if(strstr(option,"deb"))
+ PrintRecParticles(option);
+ if(strstr(option,"tim")){
+ gBenchmark->Stop("PHOSPID");
+ AliInfo(Form("took %f seconds for PID",
+ gBenchmark->GetCpuTime("PHOSPID")));
+ }
+}
+
+//________________________________________________________________________
+Double_t AliPHOSPIDv1::GausF(Double_t x, Double_t y, Double_t * par)
+{
+ //Given the energy x and the parameter y (tof, shower dispersion or cpv-emc distance),
+ //this method returns a density probability of this parameter, given by a gaussian
+ //function whose parameters depend with the energy with a function: a/(x*x)+b/x+b
+ //Float_t xorg = x;
+ if (x > par[9]) x = par[9];
- TString taskName(GetName()) ;
- taskName.Remove(taskName.Index(Version())-1) ;
+ //Double_t cnt = par[1] / (x*x) + par[2] / x + par[0] ;
+ Double_t cnt = par[0] + par[1] * x + par[2] * x * x ;
+ Double_t mean = par[4] / (x*x) + par[5] / x + par[3] ;
+ Double_t sigma = par[7] / (x*x) + par[8] / x + par[6] ;
+
+// if(xorg > 30)
+// cout<<"En_in = "<<xorg<<"; En_out = "<<x<<"; cnt = "<<cnt
+// <<"; mean = "<<mean<<"; sigma = "<<sigma<<endl;
+
+ // Double_t arg = - (y-mean) * (y-mean) / (2*sigma*sigma) ;
+ // return cnt * TMath::Exp(arg) ;
+ if(TMath::Abs(sigma) > 1.e-10){
+ return cnt*TMath::Gaus(y,mean,sigma);
+ }
+ else
+ return 0.;
+
+}
+//________________________________________________________________________
+Double_t AliPHOSPIDv1::GausPol2(Double_t x, Double_t y, Double_t * par)
+{
+ //Given the energy x and the parameter y (tof, shower dispersion or cpv-emc distance),
+ //this method returns a density probability of this parameter, given by a gaussian
+ //function whose parameters depend with the energy like second order polinomial
- while ( (branch = (TBranch*)next()) && (!phospidfound || !pidfound) ) {
- if ( (strcmp(branch->GetName(), "PHOSPID")==0) && (strcmp(branch->GetTitle(), taskName.Data())==0) )
- phospidfound = kTRUE ;
-
- else if ( (strcmp(branch->GetName(), "AliPHOSPID")==0) && (strcmp(branch->GetTitle(), taskName.Data())==0) )
- pidfound = kTRUE ;
+ Double_t cnt = par[0] + par[1] * x + par[2] * x * x ;
+ Double_t mean = par[3] + par[4] * x + par[5] * x * x ;
+ Double_t sigma = par[6] + par[7] * x + par[8] * x * x ;
+
+ if(TMath::Abs(sigma) > 1.e-10){
+ return cnt*TMath::Gaus(y,mean,sigma);
}
+ else
+ return 0.;
+
- if ( phospidfound || pidfound ) {
- cerr << "WARNING: AliPHOSPIDv1::Exec -> RecParticles and/or PIDtMaker branch with name "
- << taskName.Data() << " already exits" << endl ;
- return ;
- }
+
+}
+
+//____________________________________________________________________________
+const TString AliPHOSPIDv1::GetFileNamePrincipal(TString particle) const
+{
+ //Get file name that contains the PCA for a particle ("photon or pi0")
+ particle.ToLower();
+ TString name;
+ if (particle=="photon")
+ name = fFileNamePrincipalPhoton ;
+ else if (particle=="pi0" )
+ name = fFileNamePrincipalPi0 ;
+ else
+ AliError(Form("Wrong particle name: %s (choose from pi0/photon)\n",
+ particle.Data()));
+ return name;
+}
+
+//____________________________________________________________________________
+Float_t AliPHOSPIDv1::GetParameterCalibration(Int_t i) const
+{
+ // Get the i-th parameter "Calibration"
+ Float_t param = 0.;
+ if (i>2 || i<0) {
+ AliError(Form("Invalid parameter number: %d",i));
+ } else
+ param = (*fParameters)(0,i);
+ return param;
+}
+
+//____________________________________________________________________________
+Float_t AliPHOSPIDv1::GetCalibratedEnergy(Float_t e) const
+{
+// It calibrates Energy depending on the recpoint energy.
+// The energy of the reconstructed cluster is corrected with
+// the formula A + B* E + C* E^2, whose parameters where obtained
+// through the study of the reconstructed energy distribution of
+// monoenergetic photons.
- Int_t nevents = (Int_t) gAlice->TreeE()->GetEntries() ;
- Int_t ievent ;
- AliPHOSGetter * gime = AliPHOSGetter::GetInstance() ;
+ if(!fEnergyCorrectionOn) return e;
- for(ievent = 0; ievent < nevents; ievent++){
- gime->Event(ievent,"R") ;
-
- MakeRecParticles() ;
-
- WriteRecParticles(ievent);
-
- if(strstr(option,"deb"))
- PrintRecParticles(option) ;
+ Float_t p[]={0.,0.,0.};
+ for (Int_t i=0; i<3; i++) p[i] = GetParameterCalibration(i);
+ Float_t enerec = p[0] + p[1]*e + p[2]*e*e;
+ return enerec ;
- //increment the total number of rec particles per run
- fRecParticlesInRun += gime->RecParticles()->GetEntriesFast() ;
+}
+//____________________________________________________________________________
+Float_t AliPHOSPIDv1::GetParameterCpv2Emc(Int_t i, TString axis) const
+{
+ // Get the i-th parameter "CPV-EMC distance" for the specified axis
+ Float_t param = 0.;
+ if(i>2 || i<0) {
+ AliError(Form("Invalid parameter number: %d",i));
+ } else {
+ axis.ToLower();
+ if (axis == "x")
+ param = (*fParameters)(1,i);
+ else if (axis == "z")
+ param = (*fParameters)(2,i);
+ else {
+ AliError(Form("Invalid axis name: %s",axis.Data()));
+ }
}
-
- if(strstr(option,"tim")){
- gBenchmark->Stop("PHOSPID");
- cout << "AliPHOSPID:" << endl ;
- cout << " took " << gBenchmark->GetCpuTime("PHOSPID") << " seconds for PID "
- << gBenchmark->GetCpuTime("PHOSPID")/nevents << " seconds per event " << endl ;
- cout << endl ;
+ return param;
+}
+
+//____________________________________________________________________________
+Float_t AliPHOSPIDv1::GetCpv2EmcDistanceCut(TString axis, Float_t e) const
+{
+ // Get CpvtoEmcDistance Cut depending on the cluster energy, axis and
+ // Purity-Efficiency point
+
+ axis.ToLower();
+ Float_t p[]={0.,0.,0.};
+ for (Int_t i=0; i<3; i++) p[i] = GetParameterCpv2Emc(i,axis);
+ Float_t sig = p[0] + TMath::Exp(p[1] - p[2]*e);
+ return sig;
+}
+
+//____________________________________________________________________________
+Float_t AliPHOSPIDv1::GetEllipseParameter(TString particle, TString param, Float_t e) const
+{
+ // Calculates the parameter param of the ellipse
+
+ particle.ToLower();
+ param. ToLower();
+ Float_t p[4]={0.,0.,0.,0.};
+ Float_t value = 0.0;
+ for (Int_t i=0; i<4; i++) p[i] = GetParameterToCalculateEllipse(particle,param,i);
+ if (particle == "photon") {
+ if (param.Contains("a")) e = TMath::Min((Double_t)e,70.);
+ else if (param.Contains("b")) e = TMath::Min((Double_t)e,70.);
+ else if (param.Contains("x0")) e = TMath::Max((Double_t)e,1.1);
}
+
+ if (particle == "photon")
+ value = p[0]/TMath::Sqrt(e) + p[1]*e + p[2]*e*e + p[3];
+ else if (particle == "pi0")
+ value = p[0] + p[1]*e + p[2]*e*e;
+
+ return value;
+}
+
+//_____________________________________________________________________________
+Float_t AliPHOSPIDv1::GetParameterPhotonBoundary (Int_t i) const
+{
+ // Get the parameter "i" to calculate the boundary on the moment M2x
+ // for photons at high p_T
+ Float_t param = 0;
+ if (i>3 || i<0) {
+ AliError(Form("Wrong parameter number: %d\n",i));
+ } else
+ param = (*fParameters)(14,i) ;
+ return param;
+}
+
+//____________________________________________________________________________
+Float_t AliPHOSPIDv1::GetParameterPi0Boundary (Int_t i) const
+{
+ // Get the parameter "i" to calculate the boundary on the moment M2x
+ // for pi0 at high p_T
+ Float_t param = 0;
+ if (i>2 || i<0) {
+ AliError(Form("Wrong parameter number: %d\n",i));
+ } else
+ param = (*fParameters)(15,i) ;
+ return param;
+}
+
+//____________________________________________________________________________
+Float_t AliPHOSPIDv1::GetParameterTimeGate(Int_t i) const
+{
+ // Get TimeGate parameter depending on Purity-Efficiency i:
+ // i=0 - Low purity, i=1 - Medium purity, i=2 - High purity
+ Float_t param = 0.;
+ if(i>2 || i<0) {
+ AliError(Form("Invalid Efficiency-Purity choice %d",i));
+ } else
+ param = (*fParameters)(3,i) ;
+ return param;
+}
+
+//_____________________________________________________________________________
+Float_t AliPHOSPIDv1::GetParameterToCalculateEllipse(TString particle, TString param, Int_t i) const
+{
+ // Get the parameter "i" that is needed to calculate the ellipse
+ // parameter "param" for the particle "particle" ("photon" or "pi0")
+
+ particle.ToLower();
+ param. ToLower();
+ Int_t offset = -1;
+ if (particle == "photon")
+ offset=0;
+ else if (particle == "pi0")
+ offset=5;
+ else
+ AliError(Form("Wrong particle name: %s (choose from pi0/photon)\n",
+ particle.Data()));
+
+ Int_t p= -1;
+ Float_t par = 0;
+
+ if (param.Contains("a")) p=4+offset;
+ else if(param.Contains("b")) p=5+offset;
+ else if(param.Contains("c")) p=6+offset;
+ else if(param.Contains("x0"))p=7+offset;
+ else if(param.Contains("y0"))p=8+offset;
+
+ if (i>4 || i<0) {
+ AliError(Form("No parameter with index %d", i)) ;
+ } else if (p==-1) {
+ AliError(Form("No parameter with name %s", param.Data() )) ;
+ } else
+ par = (*fParameters)(p,i) ;
+ return par;
}
+
+
+//DP____________________________________________________________________________
+//Float_t AliPHOSPIDv1::GetDistance(AliPHOSEmcRecPoint * emc,AliPHOSCpvRecPoint * cpv, Option_t * axis)const
+//{
+// // Calculates the distance between the EMC RecPoint and the PPSD RecPoint
+//
+// AliPHOSGeometry * geom = AliPHOSGeometry::GetInstance();
+// TVector3 vecEmc ;
+// TVector3 vecCpv ;
+// if(cpv){
+// emc->GetLocalPosition(vecEmc) ;
+// cpv->GetLocalPosition(vecCpv) ;
+//
+// if(emc->GetPHOSMod() == cpv->GetPHOSMod()){
+// // Correct to difference in CPV and EMC position due to different distance to center.
+// // we assume, that particle moves from center
+// Float_t dCPV = geom->GetIPtoOuterCoverDistance();
+// Float_t dEMC = geom->GetIPtoCrystalSurface() ;
+// dEMC = dEMC / dCPV ;
+// vecCpv = dEMC * vecCpv - vecEmc ;
+// if (axis == "X") return vecCpv.X();
+// if (axis == "Y") return vecCpv.Y();
+// if (axis == "Z") return vecCpv.Z();
+// if (axis == "R") return vecCpv.Mag();
+// }
+// return 100000000 ;
+// }
+// return 100000000 ;
+//}
//____________________________________________________________________________
-void AliPHOSPIDv1::Init()
+Int_t AliPHOSPIDv1::GetCPVBit(AliPHOSTrackSegment * ts, Int_t effPur, Float_t e) const
{
- // Make all memory allocations that are not possible in default constructor
- // Add the PID task to the list of PHOS tasks
+ //Calculates the pid bit for the CPV selection per each purity.
+ if(effPur>2 || effPur<0)
+ AliError(Form("Invalid Efficiency-Purity choice %d",effPur));
+
+//DP if(ts->GetCpvIndex()<0)
+//DP return 1 ; //no CPV cluster
- if ( strcmp(GetTitle(), "") == 0 )
- SetTitle("galice.root") ;
+ Float_t sigX = GetCpv2EmcDistanceCut("X",e);
+ Float_t sigZ = GetCpv2EmcDistanceCut("Z",e);
- TString taskName(GetName()) ;
- taskName.Remove(taskName.Index(Version())-1) ;
+ Float_t deltaX = TMath::Abs(ts->GetCpvDistance("X"));
+ Float_t deltaZ = TMath::Abs(ts->GetCpvDistance("Z"));
+// Info("GetCPVBit"," xdist %f, sigx %f, zdist %f, sigz %f",deltaX, sigX, deltaZ,sigZ) ;
+
+ //if(deltaX>sigX*(effPur+1))
+ //if((deltaX>sigX*(effPur+1)) || (deltaZ>sigZ*(effPur+1)))
+ if((deltaX>sigX*(effPur+1)) && (deltaZ>sigZ*(effPur+1)))
+ return 1;//Neutral
+ else
+ return 0;//Charged
+}
+
+//____________________________________________________________________________
+Int_t AliPHOSPIDv1::GetPrincipalBit(TString particle, const Double_t* p, Int_t effPur, Float_t e)const
+{
+ //Is the particle inside de PCA ellipse?
- AliPHOSGetter * gime = AliPHOSGetter::GetInstance(GetTitle(), taskName.Data()) ;
- if ( gime == 0 ) {
- cerr << "ERROR: AliPHOSPIDv1::Init -> Could not obtain the Getter object !" << endl ;
- return ;
- }
-
- gime->PostPID(this) ;
- // create a folder on the white board //YSAlice/WhiteBoard/RecParticles/PHOS/recparticlesName
- gime->PostRecParticles(taskName.Data() ) ;
+ particle.ToLower();
+ Int_t prinbit = 0 ;
+ Float_t a = GetEllipseParameter(particle,"a" , e);
+ Float_t b = GetEllipseParameter(particle,"b" , e);
+ Float_t c = GetEllipseParameter(particle,"c" , e);
+ Float_t x0 = GetEllipseParameter(particle,"x0", e);
+ Float_t y0 = GetEllipseParameter(particle,"y0", e);
+ Float_t r = TMath::Power((p[0] - x0)/a,2) +
+ TMath::Power((p[1] - y0)/b,2) +
+ c*(p[0] - x0)*(p[1] - y0)/(a*b) ;
+ //3 different ellipses defined
+ if((effPur==2) && (r<1./2.)) prinbit= 1;
+ if((effPur==1) && (r<2. )) prinbit= 1;
+ if((effPur==0) && (r<9./2.)) prinbit= 1;
+
+ if(r<0)
+ AliError("Negative square?") ;
+
+ return prinbit;
+
+}
+//____________________________________________________________________________
+Int_t AliPHOSPIDv1::GetHardPhotonBit(AliPHOSEmcRecPoint * emc) const
+{
+ // Set bit for identified hard photons (E > 30 GeV)
+ // if the second moment M2x is below the boundary
+
+ Float_t e = emc->GetEnergy();
+ if (e < 30.0) return 0;
+ Float_t m2x = emc->GetM2x();
+ Float_t m2xBoundary = GetParameterPhotonBoundary(0) *
+ TMath::Exp(-TMath::Power(e-GetParameterPhotonBoundary(1),2)/2.0/
+ TMath::Power(GetParameterPhotonBoundary(2),2)) +
+ GetParameterPhotonBoundary(3);
+ AliDebug(1, Form("E=%f, m2x=%f, boundary=%f", e,m2x,m2xBoundary));
+ if (m2x < m2xBoundary)
+ return 1;// A hard photon
+ else
+ return 0;// Not a hard photon
}
//____________________________________________________________________________
-void AliPHOSPIDv1::MakeRecParticles(){
+Int_t AliPHOSPIDv1::GetHardPi0Bit(AliPHOSEmcRecPoint * emc) const
+{
+ // Set bit for identified hard pi0 (E > 30 GeV)
+ // if the second moment M2x is above the boundary
- // Makes a RecParticle out of a TrackSegment
- TString taskName(GetName()) ;
- taskName.Remove(taskName.Index(Version())-1) ;
+ Float_t e = emc->GetEnergy();
+ if (e < 30.0) return 0;
+ Float_t m2x = emc->GetM2x();
+ Float_t m2xBoundary = GetParameterPi0Boundary(0) +
+ e * GetParameterPi0Boundary(1);
+ AliDebug(1,Form("E=%f, m2x=%f, boundary=%f",e,m2x,m2xBoundary));
+ if (m2x > m2xBoundary)
+ return 1;// A hard pi0
+ else
+ return 0;// Not a hard pi0
+}
+
+//____________________________________________________________________________
+TVector3 AliPHOSPIDv1::GetMomentumDirection(AliPHOSEmcRecPoint * emc, AliPHOSCpvRecPoint * )const
+{
+ // Calculates the momentum direction:
+ // 1. if only a EMC RecPoint, direction is given by IP and this RecPoint
+ // 2. if a EMC RecPoint and CPV RecPoint, direction is given by the line through the 2 recpoints
+ // However because of the poor position resolution of PPSD the direction is always taken as if we were
+ // in case 1.
+
+ TVector3 local ;
+ emc->GetLocalPosition(local) ;
+
+ AliPHOSGeometry * phosgeom = AliPHOSGeometry::GetInstance() ;
+ //Correct for the non-perpendicular incidence
+ // Correction for the depth of the shower starting point (TDR p 127)
+ Float_t para = 0.925 ;
+ Float_t parb = 6.52 ;
+
+ //Remove Old correction (vertex at 0,0,0)
+ TVector3 vtxOld(0.,0.,0.) ;
+ TVector3 vInc ;
+ Float_t x=local.X() ;
+ Float_t z=local.Z() ;
+ phosgeom->GetIncidentVector(vtxOld,emc->GetPHOSMod(),x,z,vInc) ;
+ Float_t depthxOld = 0.;
+ Float_t depthzOld = 0.;
+ Float_t energy = emc->GetEnergy() ;
+ if (energy > 0 && vInc.Y()!=0.) {
+ depthxOld = ( para * TMath::Log(energy) + parb ) * vInc.X()/TMath::Abs(vInc.Y()) ;
+ depthzOld = ( para * TMath::Log(energy) + parb ) * vInc.Z()/TMath::Abs(vInc.Y()) ;
+ }
+ else{
+ AliError("Cluster with zero energy \n");
+ }
+ //Apply Real vertex
+ phosgeom->GetIncidentVector(fVtx,emc->GetPHOSMod(),x,z,vInc) ;
+ Float_t depthx = 0.;
+ Float_t depthz = 0.;
+ if (energy > 0 && vInc.Y()!=0.) {
+ depthx = ( para * TMath::Log(energy) + parb ) * vInc.X()/TMath::Abs(vInc.Y()) ;
+ depthz = ( para * TMath::Log(energy) + parb ) * vInc.Z()/TMath::Abs(vInc.Y()) ;
+ }
+
+ //Correct for the vertex position and shower depth
+ Double_t xd=x+(depthxOld-depthx) ;
+ Double_t zd=z+(depthzOld-depthz) ;
+ TVector3 dir(0,0,0) ;
+ phosgeom->Local2Global(emc->GetPHOSMod(),xd,zd,dir) ;
+
+ dir-=fVtx ;
+ dir.SetMag(1.) ;
+
+ return dir ;
+}
+
+//________________________________________________________________________
+Double_t AliPHOSPIDv1::LandauF(Double_t x, Double_t y, Double_t * par)
+{
+ //Given the energy x and the parameter y (tof, shower dispersion or cpv-emc distance),
+ //this method returns a density probability of this parameter, given by a landau
+ //function whose parameters depend with the energy with a function: a/(x*x)+b/x+b
+
+ if (x > par[9]) x = par[9];
+
+ //Double_t cnt = par[1] / (x*x) + par[2] / x + par[0] ;
+ Double_t cnt = par[0] + par[1] * x + par[2] * x * x ;
+ Double_t mean = par[4] / (x*x) + par[5] / x + par[3] ;
+ Double_t sigma = par[7] / (x*x) + par[8] / x + par[6] ;
+
+ if(TMath::Abs(sigma) > 1.e-10){
+ return cnt*TMath::Landau(y,mean,sigma);
+ }
+ else
+ return 0.;
+
+}
+//________________________________________________________________________
+Double_t AliPHOSPIDv1::LandauPol2(Double_t x, Double_t y, Double_t * par)
+{
+
+ //Given the energy x and the parameter y (tof, shower dispersion or cpv-emc distance),
+ //this method returns a density probability of this parameter, given by a landau
+ //function whose parameters depend with the energy like second order polinomial
+
+ Double_t cnt = par[2] * (x*x) + par[1] * x + par[0] ;
+ Double_t mean = par[5] * (x*x) + par[4] * x + par[3] ;
+ Double_t sigma = par[8] * (x*x) + par[7] * x + par[6] ;
- AliPHOSGetter * gime = AliPHOSGetter::GetInstance() ;
- TObjArray * emcRecPoints = gime->EmcRecPoints(taskName) ;
- TObjArray * cpvRecPoints = gime->CpvRecPoints(taskName) ;
- TClonesArray * trackSegments = gime->TrackSegments(taskName) ;
- TClonesArray * recParticles = gime->RecParticles(taskName) ;
- recParticles->Clear();
+ if(TMath::Abs(sigma) > 1.e-10){
+ return cnt*TMath::Landau(y,mean,sigma);
+ }
+ else
+ return 0.;
+
+
+}
+// //________________________________________________________________________
+// Double_t AliPHOSPIDv1::ChargedHadronDistProb(Double_t x, Double_t y, Double_t * parg, Double_t * parl)
+// {
+// Double_t cnt = 0.0 ;
+// Double_t mean = 0.0 ;
+// Double_t sigma = 0.0 ;
+// Double_t arg = 0.0 ;
+// if (y < parl[4] / (x*x) + parl[5] / x + parl[3]){
+// cnt = parg[1] / (x*x) + parg[2] / x + parg[0] ;
+// mean = parg[4] / (x*x) + parg[5] / x + parg[3] ;
+// sigma = parg[7] / (x*x) + parg[8] / x + parg[6] ;
+// TF1 * f = new TF1("gaus","gaus",0.,100.);
+// f->SetParameters(cnt,mean,sigma);
+// arg = f->Eval(y) ;
+// }
+// else{
+// cnt = parl[1] / (x*x) + parl[2] / x + parl[0] ;
+// mean = parl[4] / (x*x) + parl[5] / x + parl[3] ;
+// sigma = parl[7] / (x*x) + parl[8] / x + parl[6] ;
+// TF1 * f = new TF1("landau","landau",0.,100.);
+// f->SetParameters(cnt,mean,sigma);
+// arg = f->Eval(y) ;
+// }
+// // Double_t mean = par[3] + par[4] * x + par[5] * x * x ;
+// // Double_t sigma = par[6] + par[7] * x + par[8] * x * x ;
- TIter next(trackSegments) ;
+// //Double_t arg = -(y-mean)*(y-mean)/(2*sigma*sigma) ;
+// //return cnt * TMath::Exp(arg) ;
+
+// return arg;
+
+// }
+//____________________________________________________________________________
+void AliPHOSPIDv1::MakePID()
+{
+ // construct the PID weight from a Bayesian Method
+
+ const Int_t kSPECIES = AliPID::kSPECIESN ;
+
+ Int_t nparticles = fRecParticles->GetEntriesFast() ;
+
+ if ( !fEMCRecPoints || !fCPVRecPoints || !fTrackSegments ) {
+ AliFatal("RecPoints or TrackSegments not found !") ;
+ }
+
+ TIter next(fTrackSegments) ;
AliPHOSTrackSegment * ts ;
Int_t index = 0 ;
- AliPHOSRecParticle * rp ;
+
+ Double_t * stof[kSPECIES] ;
+ Double_t * sdp [kSPECIES] ;
+ Double_t * scpv[kSPECIES] ;
+ Double_t * sw [kSPECIES] ;
+ //Info("MakePID","Begin MakePID");
- Bool_t ellips = fIDOptions.Contains("ell",TString::kIgnoreCase ) ;
- Bool_t disp = fIDOptions.Contains("dis",TString::kIgnoreCase ) ;
- Bool_t time = fIDOptions.Contains("tim",TString::kIgnoreCase ) ;
+ for (Int_t i =0; i< kSPECIES; i++){
+ stof[i] = new Double_t[nparticles] ;
+ sdp [i] = new Double_t[nparticles] ;
+ scpv[i] = new Double_t[nparticles] ;
+ sw [i] = new Double_t[nparticles] ;
+ }
+
while ( (ts = (AliPHOSTrackSegment *)next()) ) {
- new( (*recParticles)[index] ) AliPHOSRecParticle() ;
- rp = (AliPHOSRecParticle *)recParticles->At(index) ;
- rp->SetTraskSegment(index) ;
- rp->SetIndexInList(index) ;
+ //cout<<">>>>>> Bayesian Index "<<index<<endl;
+
+ AliPHOSEmcRecPoint * emc = 0 ;
+ if(ts->GetEmcIndex()>=0)
+ emc = (AliPHOSEmcRecPoint *) fEMCRecPoints->At(ts->GetEmcIndex()) ;
+
+// AliPHOSCpvRecPoint * cpv = 0 ;
+// if(ts->GetCpvIndex()>=0)
+// cpv = (AliPHOSCpvRecPoint *) cpvRecPoints->At(ts->GetCpvIndex()) ;
+//
+//// Int_t track = 0 ;
+//// track = ts->GetTrackIndex() ; //TPC tracks ?
+
+ if (!emc) {
+ AliFatal(Form("-> emc(%d)", ts->GetEmcIndex())) ;
+ }
+
+
+ // ############Tof#############################
+
+ // Info("MakePID", "TOF");
+ Float_t en = emc->GetEnergy();
+ Double_t time = emc->GetTime() ;
+ // cout<<">>>>>>>Energy "<<en<<"Time "<<time<<endl;
+
+ // now get the signals probability
+ // s(pid) in the Bayesian formulation
+
+ stof[AliPID::kPhoton][index] = 1.;
+ stof[AliPID::kElectron][index] = 1.;
+ stof[AliPID::kEleCon][index] = 1.;
+ //We assing the same prob to charged hadrons, sum is 1
+ stof[AliPID::kPion][index] = 1./3.;
+ stof[AliPID::kKaon][index] = 1./3.;
+ stof[AliPID::kProton][index] = 1./3.;
+ //We assing the same prob to neutral hadrons, sum is 1
+ stof[AliPID::kNeutron][index] = 1./2.;
+ stof[AliPID::kKaon0][index] = 1./2.;
+ stof[AliPID::kMuon][index] = 1.;
+
+ if(en < fTOFEnThreshold) {
+
+ Double_t pTofPion = fTFpiong ->Eval(time) ; //gaus distribution
+ Double_t pTofKaon = 0;
+
+ if(time < fTkaonl[1])
+ pTofKaon = fTFkaong ->Eval(time) ; //gaus distribution
+ else
+ pTofKaon = fTFkaonl ->Eval(time) ; //landau distribution
+
+ Double_t pTofNucleon = 0;
+
+ if(time < fThhadronl[1])
+ pTofNucleon = fTFhhadrong ->Eval(time) ; //gaus distribution
+ else
+ pTofNucleon = fTFhhadronl ->Eval(time) ; //landau distribution
+ //We assing the same prob to neutral hadrons, sum is the average prob
+ Double_t pTofNeHadron = (pTofKaon + pTofNucleon)/2. ;
+ //We assing the same prob to charged hadrons, sum is the average prob
+ Double_t pTofChHadron = (pTofPion + pTofKaon + pTofNucleon)/3. ;
+
+ stof[AliPID::kPhoton][index] = fTFphoton ->Eval(time) ;
+ //gaus distribution
+ stof[AliPID::kEleCon][index] = stof[AliPID::kPhoton][index] ;
+ //a conversion electron has the photon ToF
+ stof[AliPID::kMuon][index] = stof[AliPID::kPhoton][index] ;
+
+ stof[AliPID::kElectron][index] = pTofPion ;
+
+ stof[AliPID::kPion][index] = pTofChHadron ;
+ stof[AliPID::kKaon][index] = pTofChHadron ;
+ stof[AliPID::kProton][index] = pTofChHadron ;
+
+ stof[AliPID::kKaon0][index] = pTofNeHadron ;
+ stof[AliPID::kNeutron][index] = pTofNeHadron ;
+ }
+
+ // Info("MakePID", "Dispersion");
+
+ // ###########Shower shape: Dispersion####################
+ Float_t dispersion = emc->GetDispersion();
+ //DP: Correct for non-perpendicular incidence
+ //DP: still to be done
+
+ //dispersion is not well defined if the cluster is only in few crystals
+
+ sdp[AliPID::kPhoton][index] = 1. ;
+ sdp[AliPID::kElectron][index] = 1. ;
+ sdp[AliPID::kPion][index] = 1. ;
+ sdp[AliPID::kKaon][index] = 1. ;
+ sdp[AliPID::kProton][index] = 1. ;
+ sdp[AliPID::kNeutron][index] = 1. ;
+ sdp[AliPID::kEleCon][index] = 1. ;
+ sdp[AliPID::kKaon0][index] = 1. ;
+ sdp[AliPID::kMuon][index] = 1. ;
+
+ if(en > fDispEnThreshold && emc->GetMultiplicity() > fDispMultThreshold){
+ sdp[AliPID::kPhoton][index] = GausF(en , dispersion, fDphoton) ;
+ sdp[AliPID::kElectron][index] = sdp[AliPID::kPhoton][index] ;
+ sdp[AliPID::kPion][index] = LandauF(en , dispersion, fDhadron ) ;
+ sdp[AliPID::kKaon][index] = sdp[AliPID::kPion][index] ;
+ sdp[AliPID::kProton][index] = sdp[AliPID::kPion][index] ;
+ sdp[AliPID::kNeutron][index] = sdp[AliPID::kPion][index] ;
+ sdp[AliPID::kEleCon][index] = sdp[AliPID::kPhoton][index];
+ sdp[AliPID::kKaon0][index] = sdp[AliPID::kPion][index] ;
+ sdp[AliPID::kMuon][index] = fDFmuon ->Eval(dispersion) ;
+ //landau distribution
+ }
+
+// Info("MakePID","multiplicity %d, dispersion %f", emc->GetMultiplicity(), dispersion);
+// Info("MakePID","ss: photon %f, hadron %f ", sdp[AliPID::kPhoton][index], sdp[AliPID::kPion][index]);
+// cout<<">>>>>multiplicity "<<emc->GetMultiplicity()<<", dispersion "<< dispersion<<endl ;
+// cout<<"<<<<<ss: photon "<<sdp[AliPID::kPhoton][index]<<", hadron "<<sdp[AliPID::kPion][index]<<endl;
+
+ //########## CPV-EMC Distance#######################
+ // Info("MakePID", "Distance");
+
+ Float_t x = TMath::Abs(ts->GetCpvDistance("X")) ;
+ Float_t z = ts->GetCpvDistance("Z") ;
+
+ Double_t pcpv = 0 ;
+ Double_t pcpvneutral = 0. ;
+
+ Double_t elprobx = GausF(en , x, fXelectron) ;
+ Double_t elprobz = GausF(en , z, fZelectron) ;
+ Double_t chprobx = GausF(en , x, fXcharged) ;
+ Double_t chprobz = GausF(en , z, fZcharged) ;
+ Double_t pcpvelectron = elprobx * elprobz;
+ Double_t pcpvcharged = chprobx * chprobz;
+
+// cout<<">>>>energy "<<en<<endl;
+// cout<<">>>>electron : x "<<x<<" xprob "<<elprobx<<" z "<<z<<" zprob "<<elprobz<<endl;
+// cout<<">>>>hadron : x "<<x<<" xprob "<<chprobx<<" z "<<z<<" zprob "<<chprobz<<endl;
+// cout<<">>>>electron : px*pz "<<pcpvelectron <<" hadron: px*pz "<<pcpvcharged<<endl;
+
+ // Is neutral or charged?
+ if(pcpvelectron >= pcpvcharged)
+ pcpv = pcpvelectron ;
+ else
+ pcpv = pcpvcharged ;
+
+ if(pcpv < fChargedNeutralThreshold)
+ {
+ pcpvneutral = 1. ;
+ pcpvcharged = 0. ;
+ pcpvelectron = 0. ;
+ }
+ // else
+ // cout<<">>>>>>>>>>>CHARGED>>>>>>>>>>>"<<endl;
+
+ scpv[AliPID::kPion][index] = pcpvcharged ;
+ scpv[AliPID::kKaon][index] = pcpvcharged ;
+ scpv[AliPID::kProton][index] = pcpvcharged ;
+
+ scpv[AliPID::kMuon][index] = pcpvelectron ;
+ scpv[AliPID::kElectron][index] = pcpvelectron ;
+ scpv[AliPID::kEleCon][index] = pcpvelectron ;
+
+ scpv[AliPID::kPhoton][index] = pcpvneutral ;
+ scpv[AliPID::kNeutron][index] = pcpvneutral ;
+ scpv[AliPID::kKaon0][index] = pcpvneutral ;
+
+
+ // Info("MakePID", "CPV passed");
+
+ //############## Pi0 #############################
+ stof[AliPID::kPi0][index] = 0. ;
+ scpv[AliPID::kPi0][index] = 0. ;
+ sdp [AliPID::kPi0][index] = 0. ;
+
+ if(en > 30.){
+ // pi0 are detected via decay photon
+ stof[AliPID::kPi0][index] = stof[AliPID::kPhoton][index];
+ scpv[AliPID::kPi0][index] = pcpvneutral ;
+ if(emc->GetMultiplicity() > fDispMultThreshold)
+ sdp [AliPID::kPi0][index] = GausF(en , dispersion, fDpi0) ;
+ //sdp [AliPID::kPi0][index] = GausPol2(en , dispersion, fDpi0) ;
+// cout<<"E = "<<en<<" GeV; disp = "<<dispersion<<"; mult = "
+// <<emc->GetMultiplicity()<<endl;
+// cout<<"PDF: photon = "<<sdp [AliPID::kPhoton][index]<<"; pi0 = "
+// <<sdp [AliPID::kPi0][index]<<endl;
+ }
+
+
+
+ //############## muon #############################
+
+ if(en > 0.5){
+ //Muons deposit few energy
+ scpv[AliPID::kMuon][index] = 0 ;
+ stof[AliPID::kMuon][index] = 0 ;
+ sdp [AliPID::kMuon][index] = 0 ;
+ }
+
+ //Weight to apply to hadrons due to energy reconstruction
+
+ Float_t weight = fERecWeight ->Eval(en) ;
+
+ sw[AliPID::kPhoton][index] = 1. ;
+ sw[AliPID::kElectron][index] = 1. ;
+ sw[AliPID::kPion][index] = weight ;
+ sw[AliPID::kKaon][index] = weight ;
+ sw[AliPID::kProton][index] = weight ;
+ sw[AliPID::kNeutron][index] = weight ;
+ sw[AliPID::kEleCon][index] = 1. ;
+ sw[AliPID::kKaon0][index] = weight ;
+ sw[AliPID::kMuon][index] = weight ;
+ sw[AliPID::kPi0][index] = 1. ;
+
+// if(en > 0.5){
+// cout<<"######################################################"<<endl;
+// //cout<<"MakePID: energy "<<en<<", tof "<<time<<", distance "<<distance<<", dispersion "<<dispersion<<endl ;
+// cout<<"MakePID: energy "<<en<<", tof "<<time<<", dispersion "<<dispersion<<", x "<<x<<", z "<<z<<endl ;
+// cout<<">>>>>multiplicity "<<emc->GetMultiplicity()<<endl;
+// cout<<">>>>electron : xprob "<<elprobx<<" zprob "<<elprobz<<endl;
+// cout<<">>>>hadron : xprob "<<chprobx<<" zprob "<<chprobz<<endl;
+// cout<<">>>>electron : px*pz "<<pcpvelectron <<" hadron: px*pz "<<pcpvcharged<<endl;
+
+// cout<<"Photon , pid "<< fInitPID[AliPID::kPhoton]<<" tof "<<stof[AliPID::kPhoton][index]
+// <<", cpv "<<scpv[AliPID::kPhoton][index]<<", ss "<<sdp[AliPID::kPhoton][index]<<endl;
+// cout<<"EleCon , pid "<< fInitPID[AliPID::kEleCon]<<", tof "<<stof[AliPID::kEleCon][index]
+// <<", cpv "<<scpv[AliPID::kEleCon][index]<<" ss "<<sdp[AliPID::kEleCon][index]<<endl;
+// cout<<"Electron , pid "<< fInitPID[AliPID::kElectron]<<", tof "<<stof[AliPID::kElectron][index]
+// <<", cpv "<<scpv[AliPID::kElectron][index]<<" ss "<<sdp[AliPID::kElectron][index]<<endl;
+// cout<<"Muon , pid "<< fInitPID[AliPID::kMuon]<<", tof "<<stof[AliPID::kMuon][index]
+// <<", cpv "<<scpv[AliPID::kMuon][index]<<" ss "<<sdp[AliPID::kMuon][index]<<endl;
+// cout<<"Pi0 , pid "<< fInitPID[AliPID::kPi0]<<", tof "<<stof[AliPID::kPi0][index]
+// <<", cpv "<<scpv[AliPID::kPi0][index]<<" ss "<<sdp[AliPID::kPi0][index]<<endl;
+// cout<<"Pion , pid "<< fInitPID[AliPID::kPion]<<", tof "<<stof[AliPID::kPion][index]
+// <<", cpv "<<scpv[AliPID::kPion][index]<<" ss "<<sdp[AliPID::kPion][index]<<endl;
+// cout<<"Kaon0 , pid "<< fInitPID[AliPID::kKaon0]<<", tof "<<stof[AliPID::kKaon0][index]
+// <<", cpv "<<scpv[AliPID::kKaon0][index]<<" ss "<<sdp[AliPID::kKaon0][index]<<endl;
+// cout<<"Kaon , pid "<< fInitPID[AliPID::kKaon]<<", tof "<<stof[AliPID::kKaon][index]
+// <<", cpv "<<scpv[AliPID::kKaon][index]<<" ss "<<sdp[AliPID::kKaon][index]<<endl;
+// cout<<"Neutron , pid "<< fInitPID[AliPID::kNeutron]<<", tof "<<stof[AliPID::kNeutron][index]
+// <<", cpv "<<scpv[AliPID::kNeutron][index]<<" ss "<<sdp[AliPID::kNeutron][index]<<endl;
+// cout<<"Proton , pid "<< fInitPID[AliPID::kProton]<<", tof "<<stof[AliPID::kProton][index]
+// <<", cpv "<<scpv[AliPID::kProton][index]<<" ss "<<sdp[AliPID::kProton][index]<<endl;
+// cout<<"######################################################"<<endl;
+// }
+ index++;
+ }
+
+ //for (index = 0 ; index < kSPECIES ; index++)
+ // pid[index] /= nparticles ;
+
+
+ // Info("MakePID", "Total Probability calculation");
+
+ for(index = 0 ; index < nparticles ; index ++) {
+
+ AliPHOSRecParticle * recpar = static_cast<AliPHOSRecParticle *>(fRecParticles->At(index));
+
+ //Conversion electron?
+
+ if(recpar->IsEleCon()){
+ fInitPID[AliPID::kEleCon] = 1. ;
+ fInitPID[AliPID::kPhoton] = 0. ;
+ fInitPID[AliPID::kElectron] = 0. ;
+ }
+ else{
+ fInitPID[AliPID::kEleCon] = 0. ;
+ fInitPID[AliPID::kPhoton] = 1. ;
+ fInitPID[AliPID::kElectron] = 1. ;
+ }
+ // fInitPID[AliPID::kEleCon] = 0. ;
+
+
+ // calculates the Bayesian weight
+
+ Int_t jndex ;
+ Double_t wn = 0.0 ;
+ for (jndex = 0 ; jndex < kSPECIES ; jndex++)
+ wn += stof[jndex][index] * sdp[jndex][index] * scpv[jndex][index] *
+ sw[jndex][index] * fInitPID[jndex] ;
+
+ // cout<<"*************wn "<<wn<<endl;
+ if (TMath::Abs(wn)>0)
+ for (jndex = 0 ; jndex < kSPECIES ; jndex++) {
+ //cout<<"jndex "<<jndex<<" wn "<<wn<<" SetPID * wn"
+ //<<stof[jndex][index] * sdp[jndex][index] * pid[jndex] << endl;
+ //cout<<" tof "<<stof[jndex][index] << " disp " <<sdp[jndex][index] << " pid "<< fInitPID[jndex] << endl;
+ // if(jndex == AliPID::kPi0 || jndex == AliPID::kPhoton){
+ // cout<<"Particle "<<jndex<<" final prob * wn "
+ // <<stof[jndex][index] * sdp[jndex][index] * scpv[jndex][index] *
+ // fInitPID[jndex] <<" wn "<< wn<<endl;
+ // cout<<"pid "<< fInitPID[jndex]<<", tof "<<stof[jndex][index]
+ // <<", cpv "<<scpv[jndex][index]<<" ss "<<sdp[jndex][index]<<endl;
+ // }
+ recpar->SetPID(jndex, stof[jndex][index] * sdp[jndex][index] *
+ sw[jndex][index] * scpv[jndex][index] *
+ fInitPID[jndex] / wn) ;
+ }
+ }
+ // Info("MakePID", "Delete");
+
+ for (Int_t i =0; i< kSPECIES; i++){
+ delete [] stof[i];
+ delete [] sdp [i];
+ delete [] scpv[i];
+ delete [] sw [i];
+ }
+ // Info("MakePID","End MakePID");
+}
+
+//____________________________________________________________________________
+void AliPHOSPIDv1::MakeRecParticles()
+{
+ // Makes a RecParticle out of a TrackSegment
+
+ if ( !fEMCRecPoints || !fCPVRecPoints || !fTrackSegments ) {
+ AliFatal("RecPoints or TrackSegments not found !") ;
+ }
+ fRecParticles->Clear();
+
+ TIter next(fTrackSegments) ;
+ AliPHOSTrackSegment * ts ;
+ Int_t index = 0 ;
+ AliPHOSRecParticle * rp ;
+ while ( (ts = (AliPHOSTrackSegment *)next()) ) {
+ // cout<<">>>>>>>>>>>>>>>PCA Index "<<index<<endl;
+ new( (*fRecParticles)[index] ) AliPHOSRecParticle() ;
+ rp = (AliPHOSRecParticle *)fRecParticles->At(index) ;
+ rp->SetTrackSegment(index) ;
+ rp->SetIndexInList(index) ;
+
AliPHOSEmcRecPoint * emc = 0 ;
if(ts->GetEmcIndex()>=0)
- emc = (AliPHOSEmcRecPoint *) emcRecPoints->At(ts->GetEmcIndex()) ;
+ emc = (AliPHOSEmcRecPoint *) fEMCRecPoints->At(ts->GetEmcIndex()) ;
- AliPHOSRecPoint * cpv = 0 ;
+ AliPHOSCpvRecPoint * cpv = 0 ;
if(ts->GetCpvIndex()>=0)
- cpv = (AliPHOSRecPoint *) cpvRecPoints->At(ts->GetCpvIndex()) ;
+ cpv = (AliPHOSCpvRecPoint *) fCPVRecPoints->At(ts->GetCpvIndex()) ;
- //set momentum and energy first
- Float_t e = emc->GetEnergy() ;
- TVector3 dir = GetMomentumDirection(emc,cpv) ;
- dir.SetMag(e) ;
+ Int_t track = 0 ;
+ track = ts->GetTrackIndex() ;
+
+ // Now set type (reconstructed) of the particle
- rp->SetMomentum(dir.X(),dir.Y(),dir.Z(),e) ;
- rp->SetCalcMass(0);
+ // Choose the cluster energy range
+
+ if (!emc) {
+ AliFatal(Form("-> emc(%d)", ts->GetEmcIndex())) ;
+ }
- //now set type (reconstructed) of the particle
- Int_t showerprofile = 0; // 0 narrow and 1 wide
+ Float_t e = emc->GetEnergy() ;
- if(ellips){
- Float_t lambda[2] ;
- emc->GetElipsAxis(lambda) ;
- if(fFormula->Eval(lambda[0],lambda[1]) <= 0 )
- showerprofile = 1 ; // not narrow
+ Float_t lambda[2] ;
+ emc->GetElipsAxis(lambda) ;
+
+ if((lambda[0]>0.01) && (lambda[1]>0.01)){
+ // Looking PCA. Define and calculate the data (X),
+ // introduce in the function X2P that gives the components (P).
+
+ Float_t spher = 0. ;
+ Float_t emaxdtotal = 0. ;
+
+ if((lambda[0]+lambda[1])!=0)
+ spher=TMath::Abs(lambda[0]-lambda[1])/(lambda[0]+lambda[1]);
+
+ emaxdtotal=emc->GetMaximalEnergy()/emc->GetEnergy();
+
+ fX[0] = lambda[0] ;
+ fX[1] = lambda[1] ;
+ fX[2] = emc->GetDispersion() ;
+ fX[3] = spher ;
+ fX[4] = emc->GetMultiplicity() ;
+ fX[5] = emaxdtotal ;
+ fX[6] = emc->GetCoreEnergy() ;
+
+ fPrincipalPhoton->X2P(fX,fPPhoton);
+ fPrincipalPi0 ->X2P(fX,fPPi0);
+
+ }
+ else{
+ fPPhoton[0]=-100.0; //We do not accept clusters with
+ fPPhoton[1]=-100.0; //one cell as a photon-like
+ fPPi0[0] =-100.0;
+ fPPi0[1] =-100.0;
}
- if(disp)
- if(emc->GetDispersion() > fDispersion )
- showerprofile = 1 ; // not narrow
+ Float_t time = emc->GetTime() ;
+ rp->SetTof(time) ;
- Int_t slow = 0 ;
- if(time)
- if(emc->GetTime() > fTimeGate )
- slow = 0 ;
-
- // Looking at the CPV detector
- Int_t cpvdetector= 0 ; //1 hit and 0 no hit
- if(cpv)
- if(GetDistance(emc, cpv, "R") < fCpvEmcDistance)
- cpvdetector = 1 ;
+ // Loop of Efficiency-Purity (the 3 points of purity or efficiency
+ // are taken into account to set the particle identification)
+ for(Int_t effPur = 0; effPur < 3 ; effPur++){
+
+ // Looking at the CPV detector. If RCPV greater than CpvEmcDistance,
+ // 1st,2nd or 3rd bit (depending on the efficiency-purity point )
+ // is set to 1
+ if(GetCPVBit(ts, effPur,e) == 1 ){
+ rp->SetPIDBit(effPur) ;
+ //cout<<"CPV bit "<<effPur<<endl;
+ }
+ // Looking the TOF. If TOF smaller than gate, 4th, 5th or 6th
+ // bit (depending on the efficiency-purity point )is set to 1
+ if(time< (*fParameters)(3,effPur))
+ rp->SetPIDBit(effPur+3) ;
+
+ //Photon PCA
+ //If we are inside the ellipse, 7th, 8th or 9th
+ // bit (depending on the efficiency-purity point )is set to 1
+ if(GetPrincipalBit("photon",fPPhoton,effPur,e) == 1)
+ rp->SetPIDBit(effPur+6) ;
+
+ //Pi0 PCA
+ //If we are inside the ellipse, 10th, 11th or 12th
+ // bit (depending on the efficiency-purity point )is set to 1
+ if(GetPrincipalBit("pi0" ,fPPi0 ,effPur,e) == 1)
+ rp->SetPIDBit(effPur+9) ;
+ }
+ if(GetHardPhotonBit(emc))
+ rp->SetPIDBit(12) ;
+ if(GetHardPi0Bit (emc))
+ rp->SetPIDBit(13) ;
- Int_t type = showerprofile + 2 * slow + 4 * cpvdetector ;
- rp->SetType(type) ;
- rp->SetProductionVertex(0,0,0,0);
+ if(track >= 0)
+ rp->SetPIDBit(14) ;
+
+ //Set momentum, energy and other parameters
+ Float_t encal = GetCalibratedEnergy(e);
+ TVector3 dir = GetMomentumDirection(emc,cpv) ;
+ dir.SetMag(encal) ;
+ rp->SetMomentum(dir.X(),dir.Y(),dir.Z(),encal) ;
+ rp->SetCalcMass(0);
+ rp->Name(); //If photon sets the particle pdg name to gamma
+ rp->SetProductionVertex(fVtx.X(),fVtx.Y(),fVtx.Z(),0);
rp->SetFirstMother(-1);
rp->SetLastMother(-1);
rp->SetFirstDaughter(-1);
rp->SetLastDaughter(-1);
rp->SetPolarisation(0,0,0);
+ //Set the position in global coordinate system from the RecPoint
+ AliPHOSTrackSegment * ts1 = static_cast<AliPHOSTrackSegment *>(fTrackSegments->At(rp->GetPHOSTSIndex()));
+ AliPHOSEmcRecPoint * erp = static_cast<AliPHOSEmcRecPoint *>(fEMCRecPoints->At(ts1->GetEmcIndex()));
+ TVector3 pos ;
+ fGeom->GetGlobalPHOS(erp, pos) ;
+ rp->SetPos(pos);
index++ ;
}
-
}
-
+
//____________________________________________________________________________
-void AliPHOSPIDv1:: Print(Option_t * option) const
+void AliPHOSPIDv1::Print(const Option_t *) const
{
// Print the parameters used for the particle type identification
- cout << "=============== AliPHOSPID1 ================" << endl ;
- cout << "Making PID "<< endl ;
- cout << " Headers file: " << fHeaderFileName.Data() << endl ;
- cout << " RecPoints branch title: " << fRecPointsTitle.Data() << endl ;
- cout << " TrackSegments Branch title: " << fTrackSegmentsTitle.Data() << endl ;
- cout << " RecParticles Branch title " << fRecParticlesTitle.Data() << endl;
- cout << "with parameters: " << endl ;
- cout << " Maximal EMC - CPV distance (cm) " << fCpvEmcDistance << endl ;
- if(fIDOptions.Contains("dis",TString::kIgnoreCase ))
- cout << " dispersion cut " << fDispersion << endl ;
- if(fIDOptions.Contains("ell",TString::kIgnoreCase )){
- cout << " Eliptic cuts function: " << endl ;
- cout << fFormula->GetTitle() << endl ;
- }
- if(fIDOptions.Contains("tim",TString::kIgnoreCase ))
- cout << " Time Gate uzed: " << fTimeGate << endl ;
- cout << "============================================" << endl ;
+
+ AliInfo("=============== AliPHOSPIDv1 ================") ;
+ printf("Making PID\n") ;
+ printf(" Pricipal analysis file from 0.5 to 100 %s\n", fFileNamePrincipalPhoton.Data() ) ;
+ printf(" Name of parameters file %s\n", fFileNameParameters.Data() ) ;
+ printf(" Matrix of Parameters: 14x4\n") ;
+ printf(" Energy Calibration 1x3 [3 parametres to calibrate energy: A + B* E + C * E^2]\n") ;
+ printf(" RCPV 2x3 rows x and z, columns function cut parameters\n") ;
+ printf(" TOF 1x3 [High Eff-Low Pur,Medium Eff-Pur, Low Eff-High Pur]\n") ;
+ printf(" PCA 5x4 [5 ellipse parametres and 4 parametres to calculate them: A/Sqrt(E) + B* E + C * E^2 + D]\n") ;
+ printf(" Pi0 PCA 5x3 [5 ellipse parametres and 3 parametres to calculate them: A + B* E + C * E^2]\n") ;
+ fParameters->Print() ;
}
+
+
//____________________________________________________________________________
-void AliPHOSPIDv1::SetShowerProfileCut(char * formula)
+void AliPHOSPIDv1::PrintRecParticles(Option_t * option)
{
- //set shape of the cut on the axis of ellipce, drown around shouer
- //shower considered "narrow" if Formula(lambda[0],lambda[1]) > 0.
- if(fFormula)
- delete fFormula;
- fFormula = new TFormula("Lambda Cut",formula) ;
+ // Print table of reconstructed particles
+
+ TString message ;
+ message = " found " ;
+ message += fRecParticles->GetEntriesFast();
+ message += " RecParticles\n" ;
+
+ if(strstr(option,"all")) { // printing found TS
+ message += "\n PARTICLE Index \n" ;
+
+ Int_t index ;
+ for (index = 0 ; index < fRecParticles->GetEntries() ; index++) {
+ AliPHOSRecParticle * rp = (AliPHOSRecParticle * ) fRecParticles->At(index) ;
+ message += "\n" ;
+ message += rp->Name().Data() ;
+ message += " " ;
+ message += rp->GetIndexInList() ;
+ message += " " ;
+ message += rp->GetType() ;
+ }
+ }
+ AliInfo(message.Data() ) ;
}
+
//____________________________________________________________________________
-void AliPHOSPIDv1::WriteRecParticles(Int_t event)
+void AliPHOSPIDv1::SetParameters()
{
-
- AliPHOSGetter *gime = AliPHOSGetter::GetInstance() ;
- TString taskName(GetName()) ;
- taskName.Remove(taskName.Index(Version())-1) ;
- TClonesArray * recParticles = gime->RecParticles(taskName) ;
- recParticles->Expand(recParticles->GetEntriesFast() ) ;
-
- //Make branch in TreeR for RecParticles
- char * filename = 0;
- if(gSystem->Getenv("CONFIG_SPLIT_FILE")!=0){ //generating file name
- filename = new char[strlen(gAlice->GetBaseFile())+20] ;
- sprintf(filename,"%s/PHOS.Reco.root",gAlice->GetBaseFile()) ;
- }
+ // PCA : To do the Principal Components Analysis it is necessary
+ // the Principal file, which is opened here
+ fX = new double[7]; // Data for the PCA
+ fPPhoton = new double[7]; // Eigenvalues of the PCA
+ fPPi0 = new double[7]; // Eigenvalues of the Pi0 PCA
+
+ // Read photon principals from the photon file
- TDirectory *cwd = gDirectory;
-
- //First rp
- Int_t bufferSize = 32000 ;
- TBranch * rpBranch = gAlice->TreeR()->Branch("PHOSRP",&recParticles,bufferSize);
- rpBranch->SetTitle(fRecParticlesTitle);
- if (filename) {
- rpBranch->SetFile(filename);
- TIter next( rpBranch->GetListOfBranches());
- TBranch * sb ;
- while ((sb=(TBranch*)next())) {
- sb->SetFile(filename);
- }
- cwd->cd();
+ fFileNamePrincipalPhoton = "$ALICE_ROOT/PHOS/PCA8pa15_0.5-100.root" ;
+ TFile f( fFileNamePrincipalPhoton.Data(), "read" ) ;
+ fPrincipalPhoton = dynamic_cast<TPrincipal*> (f.Get("principal")) ;
+ f.Close() ;
+
+ // Read pi0 principals from the pi0 file
+
+ fFileNamePrincipalPi0 = "$ALICE_ROOT/PHOS/PCA_pi0_40-120.root" ;
+ TFile fPi0( fFileNamePrincipalPi0.Data(), "read" ) ;
+ fPrincipalPi0 = dynamic_cast<TPrincipal*> (fPi0.Get("principal")) ;
+ fPi0.Close() ;
+
+ // Open parameters file and initialization of the Parameters matrix.
+ // In the File Parameters.dat are all the parameters. These are introduced
+ // in a matrix of 16x4
+ //
+ // All the parameters defined in this file are, in order of row:
+ // line 0 : calibration
+ // lines 1,2 : CPV rectangular cat for X and Z
+ // line 3 : TOF cut
+ // lines 4-8 : parameters to calculate photon PCA ellipse
+ // lines 9-13: parameters to calculate pi0 PCA ellipse
+ // lines 14-15: parameters to calculate border for high-pt photons and pi0
+
+ fFileNameParameters = gSystem->ExpandPathName("$ALICE_ROOT/PHOS/Parameters.dat");
+ fParameters = new TMatrixF(16,4) ;
+ const Int_t kMaxLeng=255;
+ char string[kMaxLeng];
+
+ // Open a text file with PID parameters
+ FILE *fd = fopen(fFileNameParameters.Data(),"r");
+ if (!fd)
+ AliFatal(Form("File %s with a PID parameters cannot be opened\n",
+ fFileNameParameters.Data()));
+
+ Int_t i=0;
+ // Read parameter file line-by-line and skip empty line and comments
+ while (fgets(string,kMaxLeng,fd) != NULL) {
+ if (string[0] == '\n' ) continue;
+ if (string[0] == '!' ) continue;
+ sscanf(string, "%f %f %f %f",
+ &(*fParameters)(i,0), &(*fParameters)(i,1),
+ &(*fParameters)(i,2), &(*fParameters)(i,3));
+ i++;
+ AliDebug(1, Form("Line %d: %s",i,string));
}
-
- //second, pid
- Int_t splitlevel = 0 ;
- AliPHOSPIDv1 * pid = this ;
- TBranch * pidBranch = gAlice->TreeR()->Branch("AliPHOSPID","AliPHOSPIDv1",&pid,bufferSize,splitlevel);
- pidBranch->SetTitle(fRecParticlesTitle.Data());
- if (filename) {
- pidBranch->SetFile(filename);
- TIter next( pidBranch->GetListOfBranches());
- TBranch * sb ;
- while ((sb=(TBranch*)next())) {
- sb->SetFile(filename);
- }
- cwd->cd();
- }
-
- rpBranch->Fill() ;
- pidBranch->Fill() ;
-
- gAlice->TreeR()->Write(0,kOverwrite) ;
-
- delete [] filename ;
+ fclose(fd);
}
//____________________________________________________________________________
-void AliPHOSPIDv1::PlotDispersionCuts()const
+void AliPHOSPIDv1::SetParameterCalibration(Int_t i,Float_t param)
{
- // produces a plot of the dispersion cut
- TCanvas* lambdas = new TCanvas("lambdas","Cuts on the ellipse axis",200,10,700,500);
-
- if(fIDOptions.Contains("ell",TString::kIgnoreCase ) ){
- TF2 * ell = new TF2("Elliptic Cuts",fFormula->GetName(),0,3,0,3) ;
- ell->SetMinimum(0.0000001) ;
- ell->SetMaximum(0.001) ;
- ell->SetLineStyle(1) ;
- ell->SetLineWidth(2) ;
- ell->Draw() ;
- }
-
- if( fIDOptions.Contains("dis",TString::kIgnoreCase ) ){
- TF2 * dsp = new TF2("dispersion","(y<x)*(x*x+y*y < [0]*[0])",0,3,0,3) ;
- dsp->SetParameter(0,fDispersion) ;
- dsp->SetMinimum(0.0000001) ;
- dsp->SetMaximum(0.001) ;
- dsp->SetLineStyle(1) ;
- dsp->SetLineColor(2) ;
- dsp->SetLineWidth(2) ;
- dsp->SetNpx(200) ;
- dsp->SetNpy(200) ;
- if(fIDOptions.Contains("ell",TString::kIgnoreCase ) )
- dsp->Draw("same") ;
- else
- dsp->Draw() ;
- }
- lambdas->Update();
+ // Set parameter "Calibration" i to a value param
+ if(i>2 || i<0) {
+ AliError(Form("Invalid parameter number: %d",i));
+ } else
+ (*fParameters)(0,i) = param ;
}
//____________________________________________________________________________
-TVector3 AliPHOSPIDv1::GetMomentumDirection(AliPHOSEmcRecPoint * emc, AliPHOSRecPoint * cpv)const
-{
- // Calculates the momentum direction:
- // 1. if only a EMC RecPoint, direction is given by IP and this RecPoint
- // 2. if a EMC RecPoint and CPV RecPoint, direction is given by the line through the 2 recpoints
- // However because of the poor position resolution of PPSD the direction is always taken as if we were
- // in case 1.
-
- TVector3 dir(0,0,0) ;
-
- TVector3 emcglobalpos ;
- TMatrix dummy ;
-
- emc->GetGlobalPosition(emcglobalpos, dummy) ;
-
-
- // The following commented code becomes valid once the PPSD provides
- // a reasonable position resolution, at least as good as EMC !
- // TVector3 ppsdlglobalpos ;
- // TVector3 ppsduglobalpos ;
- // if( fPpsdLowRecPoint ){ // certainly a photon that has concerted
- // fPpsdLowRecPoint->GetGlobalPosition(ppsdlglobalpos, mdummy) ;
- // dir = emcglobalpos - ppsdlglobalpos ;
- // if( fPpsdUpRecPoint ){ // not looks like a charged
- // fPpsdUpRecPoint->GetGlobalPosition(ppsduglobalpos, mdummy) ;
- // dir = ( dir + emcglobalpos - ppsduglobalpos ) * 0.5 ;
- // }
- // }
- // else { // looks like a neutral
- // dir = emcglobalpos ;
- // }
-
- dir = emcglobalpos ;
- dir.SetZ( -dir.Z() ) ; // why ?
- dir.SetMag(1.) ;
+void AliPHOSPIDv1::SetParameterCpv2Emc(Int_t i, TString axis, Float_t cut)
+{
+ // Set the parameters to calculate Cpv-to-Emc Distance Cut depending on
+ // Purity-Efficiency point i
- //account correction to the position of IP
- Float_t xo,yo,zo ; //Coordinates of the origin
- gAlice->Generator()->GetOrigin(xo,yo,zo) ;
- TVector3 origin(xo,yo,zo);
- dir = dir - origin ;
+ if(i>2 || i<0) {
+ AliError(Form("Invalid parameter number: %d",i));
+ } else {
+ axis.ToLower();
+ if (axis == "x") (*fParameters)(1,i) = cut;
+ else if (axis == "z") (*fParameters)(2,i) = cut;
+ else {
+ AliError(Form("Invalid axis name: %s",axis.Data()));
+ }
+ }
+}
- return dir ;
+//____________________________________________________________________________
+void AliPHOSPIDv1::SetParameterPhotonBoundary(Int_t i,Float_t param)
+{
+ // Set parameter "Hard photon boundary" i to a value param
+ if(i>4 || i<0) {
+ AliError(Form("Invalid parameter number: %d",i));
+ } else
+ (*fParameters)(14,i) = param ;
}
+
//____________________________________________________________________________
-void AliPHOSPIDv1::PrintRecParticles(Option_t * option)
+void AliPHOSPIDv1::SetParameterPi0Boundary(Int_t i,Float_t param)
{
- // Print table of reconstructed particles
+ // Set parameter "Hard pi0 boundary" i to a value param
+ if(i>1 || i<0) {
+ AliError(Form("Invalid parameter number: %d",i));
+ } else
+ (*fParameters)(15,i) = param ;
+}
- AliPHOSGetter *gime = AliPHOSGetter::GetInstance() ;
+//_____________________________________________________________________________
+void AliPHOSPIDv1::SetParameterTimeGate(Int_t i, Float_t gate)
+{
+ // Set the parameter TimeGate depending on Purity-Efficiency point i
+ if (i>2 || i<0) {
+ AliError(Form("Invalid Efficiency-Purity choice %d",i));
+ } else
+ (*fParameters)(3,i)= gate ;
+}
- TString taskName(GetName()) ;
- taskName.Remove(taskName.Index(Version())-1) ;
- TClonesArray * recParticles = gime->RecParticles(taskName) ;
-
- cout << "AliPHOSPIDv1: event "<<gAlice->GetEvNumber() << endl ;
- cout << " found " << recParticles->GetEntriesFast() << " RecParticles " << endl ;
+//_____________________________________________________________________________
+void AliPHOSPIDv1::SetParameterToCalculateEllipse(TString particle, TString param, Int_t i, Float_t par)
+{
+ // Set the parameter "i" that is needed to calculate the ellipse
+ // parameter "param" for a particle "particle"
- if(strstr(option,"all")) { // printing found TS
-
- cout << " PARTICLE "
- << " Index " << endl ;
- // << " X "
- // << " Y "
- // << " Z "
- // << " # of primaries "
- // << " Primaries list " << endl;
-
- Int_t index ;
- for (index = 0 ; index < recParticles->GetEntries() ; index++) {
- AliPHOSRecParticle * rp = (AliPHOSRecParticle * ) recParticles->At(index) ;
-
- Text_t particle[11];
- switch(rp->GetType()) {
- case AliPHOSFastRecParticle::kNEUTRALEMFAST:
- strcpy( particle, "NEUTRAL EM FAST");
- break;
- case AliPHOSFastRecParticle::kNEUTRALHAFAST:
- strcpy(particle, "NEUTRAL HA FAST");
- break;
- case AliPHOSFastRecParticle::kNEUTRALEMSLOW:
- strcpy(particle, "NEUTRAL EM SLOW");
- break ;
- case AliPHOSFastRecParticle::kNEUTRALHASLOW:
- strcpy(particle, "NEUTRAL HA SLOW");
- break ;
- case AliPHOSFastRecParticle::kCHARGEDEMFAST:
- strcpy(particle, "CHARGED EM FAST") ;
- break ;
- case AliPHOSFastRecParticle::kCHARGEDHAFAST:
- strcpy(particle, "CHARGED HA FAST") ;
- break ;
- case AliPHOSFastRecParticle::kCHARGEDEMSLOW:
- strcpy(particle, "CHARGEDEMSLOW") ;
- break ;
- case AliPHOSFastRecParticle::kCHARGEDHASLOW:
- strcpy(particle, "CHARGED HA SLOW") ;
- break ;
- }
-
- // Int_t * primaries;
- // Int_t nprimaries;
- // primaries = rp->GetPrimaries(nprimaries);
-
- cout << setw(10) << particle << " "
- << setw(5) << rp->GetIndexInList() << " " ;
- // << setw(4) << nprimaries << " ";
- // for (Int_t iprimary=0; iprimary<nprimaries; iprimary++)
- // cout << setw(4) << primaries[iprimary] << " ";
- cout << endl;
- }
- cout << "-------------------------------------------" << endl ;
- }
-
-}
+ particle.ToLower();
+ param. ToLower();
+ Int_t p= -1;
+ Int_t offset=0;
+ if (particle == "photon") offset=0;
+ else if (particle == "pi0") offset=5;
+ else
+ AliError(Form("Wrong particle name: %s (choose from pi0/photon)\n",
+ particle.Data()));
+ if (param.Contains("a")) p=4+offset;
+ else if(param.Contains("b")) p=5+offset;
+ else if(param.Contains("c")) p=6+offset;
+ else if(param.Contains("x0"))p=7+offset;
+ else if(param.Contains("y0"))p=8+offset;
+ if((i>4)||(i<0)) {
+ AliError(Form("No parameter with index %d", i)) ;
+ } else if(p==-1) {
+ AliError(Form("No parameter with name %s", param.Data() )) ;
+ } else
+ (*fParameters)(p,i) = par ;
+}
+
+//____________________________________________________________________________
+void AliPHOSPIDv1::GetVertex(void)
+{ //extract vertex either using ESD or generator
+
+ //Try to extract vertex from data
+ if(fESD){
+ const AliESDVertex *esdVtx = fESD->GetVertex() ;
+ if(esdVtx && esdVtx->GetChi2()!=0.){
+ fVtx.SetXYZ(esdVtx->GetXv(),esdVtx->GetYv(),esdVtx->GetZv()) ;
+ return ;
+ }
+ }
+ // Use vertex diamond from CDB GRP folder if the one from ESD is missing
+ // PLEASE FIX IT
+ AliWarning("Can not read vertex from data, use fixed \n") ;
+ fVtx.SetXYZ(0.,0.,0.) ;
+
+}
+//_______________________________________________________________________
+void AliPHOSPIDv1::SetInitPID(const Double_t *p) {
+ // Sets values for the initial population of each particle type
+ for (Int_t i=0; i<AliPID::kSPECIESN; i++) fInitPID[i] = p[i];
+}
+//_______________________________________________________________________
+void AliPHOSPIDv1::GetInitPID(Double_t *p) const {
+ // Gets values for the initial population of each particle type
+ for (Int_t i=0; i<AliPID::kSPECIESN; i++) p[i] = fInitPID[i];
+}
git://git.uio.no / u / mrichter / AliRoot.git / blobdiff