#include "TKDNodeInfo.h"
#include "TKDTree.h"
-#include "TRandom.h"
+#include "TROOT.h"
#include "TClonesArray.h"
#include "TLinearFitter.h"
#include "TTree.h"
#include "TH2.h"
#include "TObjArray.h"
#include "TObjString.h"
-#include "TBox.h"
-#include "TGraph.h"
-#include "TMarker.h"
#include "TMath.h"
#include "TVectorD.h"
#include "TMatrixD.h"
//_________________________________________________________________
TKDInterpolatorBase::TKDInterpolatorBase(Int_t dim) :
fNSize(dim)
- ,fNTNodes(0)
- ,fTNodes(0x0)
- ,fStatus(4)
+ ,fNodes(NULL)
+ ,fNodesDraw(NULL)
+ ,fStatus(0)
,fLambda(1 + dim + (dim*(dim+1)>>1))
,fDepth(-1)
,fAlpha(.5)
- ,fRefPoints(0x0)
- ,fBuffer(0x0)
- ,fKDhelper(0x0)
- ,fFitter(0x0)
+ ,fRefPoints(NULL)
+ ,fBuffer(NULL)
+ ,fKDhelper(NULL)
+ ,fFitter(NULL)
{
// Default constructor. To be used with care since in this case building
// of data structure is completly left to the user responsability.
+ UseWeights();
}
//_________________________________________________________________
-void TKDInterpolatorBase::Build(Int_t n)
+Bool_t TKDInterpolatorBase::Build(Int_t n)
{
// allocate memory for data
+ if(Int_t((1.+fAlpha)*fLambda) > n){ // check granularity
+ Error("TKDInterpolatorBase::Build()", Form("Minimum number of points [%d] needed for interpolation exceeds number of evaluation points [%d]. Please increase granularity.", Int_t((1.+fAlpha)*fLambda), n));
+ return kFALSE;
+ }
+
+ if(fNodes){
+ Warning("TKDInterpolatorBase::Build()", "Data already allocated.");
+ fNodes->Delete();
+ } else {
+ fNodes = new TClonesArray("TKDNodeInfo", n);
+ fNodes->SetOwner();
+ }
+
+ for(int in=0; in<n; in++) new ((*fNodes)[in]) TKDNodeInfo(fNSize);
- if(fTNodes) delete fTNodes;
- fNTNodes = n;
- // check granularity
- if(Int_t((1.+fAlpha)*fLambda) > fNTNodes){
- Warning("TKDInterpolatorBase::Build()", Form("Minimum number of points [%d] needed for interpolation exceeds number of evaluation points [%d]. Please increase granularity.", Int_t((1.+fAlpha)*fLambda), fNTNodes));
+ return kTRUE;
+}
+
+//_________________________________________________________________
+Bool_t TKDInterpolatorBase::Bootstrap()
+{
+ if(!fNodes){
+ Error("TKDInterpolatorBase::Bootstrap()", "Nodes missing. Nothing to bootstrap from.");
+ return kFALSE;
+ }
+ Int_t in = GetNTNodes(); TKDNodeInfo *n(NULL);
+ while(in--){
+ if(!(n=(TKDNodeInfo*)(*fNodes)[in])){
+ Error("TKDInterpolatorBase::Bootstrap()", Form("Node @ %d missing.", in));
+ return kFALSE;
+ }
+ n->Bootstrap();
+ if(!fNSize) fNSize = n->GetDimension();
+ //n->SetNode(fNSize, ...);
}
- fTNodes = new TClonesArray("TKDNodeInfo", fNTNodes);
- for(int in=0; in<fNTNodes; in++) new ((*fTNodes)[in]) TKDNodeInfo(fNSize);
+ fLambda = n->GetNpar();
+ return kTRUE;
}
//_________________________________________________________________
for(int idim=0; idim<fNSize; idim++) delete [] fRefPoints[idim] ;
delete [] fRefPoints;
}
- if(fTNodes) delete fTNodes;
+ if(fNodes){
+ fNodes->Delete();
+ delete fNodes;
+ }
+ if(fNodesDraw) delete [] fNodesDraw;
+
+ TH2 *h2=NULL;
+ if((h2 = (TH2S*)gROOT->FindObject("hKDnodes"))) delete h2;
}
//__________________________________________________________________
Bool_t TKDInterpolatorBase::GetCOGPoint(Int_t inode, Float_t *&coord, Float_t &val, Float_t &err) const
{
- if(inode < 0 || inode > fNTNodes) return kFALSE;
+ if(inode < 0 || inode > GetNTNodes()) return kFALSE;
- TKDNodeInfo *node = (TKDNodeInfo*)(*fTNodes)[inode];
+ TKDNodeInfo *node = (TKDNodeInfo*)(*fNodes)[inode];
coord = &(node->Data()[0]);
val = node->Val()[0];
err = node->Val()[1];
//_________________________________________________________________
TKDNodeInfo* TKDInterpolatorBase::GetNodeInfo(Int_t inode) const
{
- if(!fTNodes || inode >= fNTNodes) return 0x0;
- return (TKDNodeInfo*)(*fTNodes)[inode];
+ if(!fNodes || inode >= GetNTNodes()) return NULL;
+ return (TKDNodeInfo*)(*fNodes)[inode];
+}
+
+//_________________________________________________________________
+Int_t TKDInterpolatorBase::GetNTNodes() const
+{
+ return fNodes?fNodes->GetEntriesFast():0;
}
+//_________________________________________________________________
+Bool_t TKDInterpolatorBase::GetRange(Int_t ax, Float_t &min, Float_t &max) const
+{
+ if(!fNodes) return kFALSE;
+ Int_t ndim = ((TKDNodeInfo*)(*fNodes)[0])->GetDimension();
+ if(ax<0 || ax>=ndim){
+ min=0.; max=0.;
+ return kFALSE;
+ }
+ min=1.e10; max=-1.e10;
+ Float_t axmin, axmax;
+ for(Int_t in=GetNTNodes(); in--; ){
+ TKDNodeInfo *node = (TKDNodeInfo*)((*fNodes)[in]);
+ node->GetBoundary(ax, axmin, axmax);
+ if(axmin<min) min = axmin;
+ if(axmax>max) max = axmax;
+ }
+
+ return kTRUE;
+}
//__________________________________________________________________
-void TKDInterpolatorBase::GetStatus()
+void TKDInterpolatorBase::GetStatus(Option_t *opt)
{
// Prints the status of the interpolator
- printf("Interpolator Status :\n");
+ printf("Interpolator Status[%d] :\n", fStatus);
printf(" Dim : %d [%d]\n", fNSize, fLambda);
- printf(" Method : %s\n", fStatus&1 ? "INT" : "COG");
- printf(" Store : %s\n", fStatus&2 ? "YES" : "NO");
- printf(" Weights: %s\n", fStatus&4 ? "YES" : "NO");
+ printf(" Method : %s\n", UseCOG() ? "COG" : "INT");
+ printf(" Store : %s\n", HasStore() ? "YES" : "NO");
+ printf(" Weights: %s\n", UseWeights() ? "YES" : "NO");
- printf("fNTNodes %d\n", fNTNodes); //Number of evaluation data points
- for(int i=0; i<fNTNodes; i++){
- TKDNodeInfo *node = (TKDNodeInfo*)(*fTNodes)[i];
+ if(strcmp(opt, "all") != 0 ) return;
+ printf("GetNTNodes() %d\n", GetNTNodes()); //Number of evaluation data points
+ for(int i=0; i<GetNTNodes(); i++){
+ TKDNodeInfo *node = (TKDNodeInfo*)(*fNodes)[i];
printf("%d ", i); node->Print();
}
}
//
// 1. The default method used for interpolation is kCOG.
// 2. The initial number of neighbors used for the estimation is set to Int(alpha*fLambda) (alpha = 1.5)
-
+
Float_t pointF[50]; // local Float_t conversion for "point"
for(int idim=0; idim<fNSize; idim++) pointF[idim] = (Float_t)point[idim];
Int_t nodeIndex = GetNodeIndex(pointF);
- if(nodeIndex<0){
- Error("TKDInterpolatorBase::Eval()", "Can not retrive node for data point.");
- result = 0.;
+ if(nodeIndex<0){
+ Error("TKDInterpolatorBase::Eval()", "Can not retrive node for data point.");
+ result = 0.;
error = 1.E10;
return 0.;
}
- TKDNodeInfo *node = (TKDNodeInfo*)(*fTNodes)[nodeIndex];
- if((fStatus&1) && node->Cov() && !force) return node->CookPDF(point, result, error);
+ TKDNodeInfo *node = (TKDNodeInfo*)(*fNodes)[nodeIndex];
+ if(node->Par() && !force){
+ //printf("Node @ %d\n", nodeIndex); node->Print("a");
+ return node->CookPDF(point, result, error);
+ }
// Allocate memory
if(!fBuffer) fBuffer = new Double_t[2*fLambda];
if(!fKDhelper){
fRefPoints = new Float_t*[fNSize];
for(int id=0; id<fNSize; id++){
- fRefPoints[id] = new Float_t[fNTNodes];
- for(int in=0; in<fNTNodes; in++) fRefPoints[id][in] = ((TKDNodeInfo*)(*fTNodes)[in])->Data()[id];
+ fRefPoints[id] = new Float_t[GetNTNodes()];
+ for(int in=0; in<GetNTNodes(); in++) fRefPoints[id][in] = ((TKDNodeInfo*)(*fNodes)[in])->Data()[id];
}
- fKDhelper = new TKDTreeIF(fNTNodes, fNSize, kNhelper, fRefPoints);
+ Info("TKDInterpolatorBase::Eval()", Form("Build TKDTree(%d, %d, %d)", GetNTNodes(), fNSize, kNhelper));
+ fKDhelper = new TKDTreeIF(GetNTNodes(), fNSize, kNhelper, fRefPoints);
fKDhelper->Build();
fKDhelper->MakeBoundariesExact();
}
if(!fFitter) fFitter = new TLinearFitter(fLambda, Form("hyp%d", fLambda-1));
// generate parabolic for nD
- //Float_t alpha = Float_t(2*lambda + 1) / fNTNodes; // the bandwidth or smoothing parameter
- //Int_t npoints = Int_t(alpha * fNTNodes);
+ //Float_t alpha = Float_t(2*lambda + 1) / GetNTNodes(); // the bandwidth or smoothing parameter
+ //Int_t npoints = Int_t(alpha * GetNTNodes());
//printf("Params : %d NPoints %d\n", lambda, npoints);
// prepare workers
Bool_t kDOWN = kFALSE;
do{
+ if(npoints){
+ Info("TKDInterpolatorBase::Eval()", Form("Interpolation failed. Trying to increase the number of interpolation points from %d to %d.", npoints, npoints_new));
+ }
if(npoints == npoints_new){
Error("TKDInterpolatorBase::Eval()", Form("Interpolation failed and number of interpolation points (%d) Can not be increased further.", npoints));
result = 0.;
error = 1.E10;
return 0.;
} else npoints = npoints_new;
- if(npoints > fNTNodes){
- Warning("TKDInterpolatorBase::Eval()", Form("The number of interpolation points requested (%d) exceeds number of PDF values (%d). Downscale.", npoints, fNTNodes));
- npoints = fNTNodes;
+ if(npoints > GetNTNodes()){
+ Warning("TKDInterpolatorBase::Eval()", Form("The number of interpolation points requested (%d) exceeds number of PDF values (%d). Downscale.", npoints, GetNTNodes()));
+ npoints = GetNTNodes();
kDOWN = kTRUE;
}
// add points to fitter
fFitter->ClearPoints();
- TKDNodeInfo *tnode = 0x0;
+ TKDNodeInfo *tnode = NULL;
for(int in=0; in<npoints; in++){
- tnode = (TKDNodeInfo*)(*fTNodes)[index[in]];
+ tnode = (TKDNodeInfo*)(*fNodes)[index[in]];
//tnode->Print();
- if(fStatus&1){ // INT
+ if(UseCOG()){ // COG
+ Float_t *p = &(tnode->Data()[0]);
+ ipar = 0;
+ for(int idim=0; idim<fNSize; idim++){
+ fBuffer[ipar++] = p[idim];
+ for(int jdim=idim; jdim<fNSize; jdim++) fBuffer[ipar++] = p[idim]*p[jdim];
+ }
+ } else { // INT
Float_t *bounds = &(tnode->Data()[fNSize]);
ipar = 0;
for(int idim=0; idim<fNSize; idim++){
fBuffer[ipar++] = (bounds[2*idim]*bounds[2*idim] + bounds[2*idim] * bounds[2*idim+1] + bounds[2*idim+1] * bounds[2*idim+1])/3.;
for(int jdim=idim+1; jdim<fNSize; jdim++) fBuffer[ipar++] = (bounds[2*idim] + bounds[2*idim+1]) * (bounds[2*jdim] + bounds[2*jdim+1]) * .25;
}
- } else { // COG
- Float_t *p = &(tnode->Data()[0]);
- ipar = 0;
- for(int idim=0; idim<fNSize; idim++){
- fBuffer[ipar++] = p[idim];
- for(int jdim=idim; jdim<fNSize; jdim++) fBuffer[ipar++] = p[idim]*p[jdim];
- }
}
// calculate tri-cubic weighting function
- if(fStatus&4){
- d = dist[in]/ dist[npoints];
+ if(UseWeights()){
+ d = dist[in]/dist[npoints];
w0 = (1. - d*d*d); w = w0*w0*w0;
+ if(w<1.e-30) continue;
} else w = 1.;
-// printf("%2d x[", index[in]);
+// printf("%2d d[%f] w[%f] x[", index[in], d, w);
// for(int idim=0; idim<fLambda-1; idim++) printf("%f ", fBuffer[idim]);
-// printf("] v[%f +- %f] (%f, %f)\n", tnode->Val()[0], tnode->Val()[1]/w, tnode->Val()[1], w);
+// printf("]\n"); printf("v[%f +- %f] (%f, %f)\n", tnode->Val()[0], tnode->Val()[1]/w, tnode->Val()[1], w);
fFitter->AddPoint(fBuffer, tnode->Val()[0], tnode->Val()[1]/w);
}
npoints_new = npoints+ (kDOWN ? 0 : kdN);
Double_t chi2 = fFitter->GetChisquare()/(npoints - 4 - fLambda);
// store results
- if(fStatus&2 && fStatus&1) node->Store(par, cov);
+ node->Store(&par, HasStore()?&cov:NULL);
// Build df/dpi|x values
Double_t *fdfdp = &fBuffer[fLambda];
for(int j=0; j<fLambda; j++) error += fdfdp[i]*fdfdp[j]*cov(i,j);
}
error = TMath::Sqrt(error);
-
return chi2;
}
//_________________________________________________________________
-void TKDInterpolatorBase::DrawBins(UInt_t ax1, UInt_t ax2, Float_t ax1min, Float_t ax1max, Float_t ax2min, Float_t ax2max)
+void TKDInterpolatorBase::DrawProjection(UInt_t ax1, UInt_t ax2)
{
// Draw nodes structure projected on plane "ax1:ax2". The parameter
// "depth" specifies the bucket size per node. If depth == -1 draw only
// terminal nodes and evaluation points (default -1 i.e. bucket size per node equal bucket size specified by the user)
//
-// Observation:
-// This function creates the nodes (TBox) array for the specified depth
-// but don't delete it. Abusing this function may cause memory leaks !
-
-
- TH2 *h2 = new TH2S("hNodes", "", 100, ax1min, ax1max, 100, ax2min, ax2max);
+ Float_t ax1min, ax1max, ax2min, ax2max;
+ GetRange(ax1, ax1min, ax1max);
+ GetRange(ax2, ax2min, ax2max);
+ TH2 *h2 = NULL;
+ if(!(h2 = (TH2S*)gROOT->FindObject("hKDnodes"))){
+ h2 = new TH2S("hKDnodes", "", 100, ax1min, ax1max, 100, ax2min, ax2max);
+ }
+ h2->GetXaxis()->SetRangeUser(ax1min, ax1max);
h2->GetXaxis()->SetTitle(Form("x_{%d}", ax1));
+ h2->GetYaxis()->SetRangeUser(ax2min, ax2max);
h2->GetYaxis()->SetTitle(Form("x_{%d}", ax2));
h2->Draw();
-
- const Float_t kBorder = 0.;//1.E-4;
- TBox *boxArray = new TBox[fNTNodes], *box;
- Float_t *bounds = 0x0;
- for(int inode = 0; inode < fNTNodes; inode++){
- box = &boxArray[inode];
- box->SetFillStyle(3002);
- box->SetFillColor(50+Int_t(gRandom->Uniform()*50.));
-
- bounds = &(((TKDNodeInfo*)(*fTNodes)[inode])->Data()[fNSize]);
- box->DrawBox(bounds[2*ax1]+kBorder, bounds[2*ax2]+kBorder, bounds[2*ax1+1]-kBorder, bounds[2*ax2+1]-kBorder);
- }
- // Draw reference points
- TGraph *ref = new TGraph(fNTNodes);
- ref->SetMarkerStyle(3);
- ref->SetMarkerSize(.7);
- ref->SetMarkerColor(2);
- for(int inode = 0; inode < fNTNodes; inode++){
- TKDNodeInfo *node = (TKDNodeInfo*)(*fTNodes)[inode];
- ref->SetPoint(inode, node->Data()[ax1], node->Data()[ax2]);
+
+ if(!fNodesDraw) fNodesDraw = new TKDNodeInfo::TKDNodeDraw[GetNTNodes()];
+ TKDNodeInfo::TKDNodeDraw *box = NULL;
+ for(Int_t in=GetNTNodes(); in--; ){
+ box = &(fNodesDraw[in]);
+ box->SetNode((TKDNodeInfo*)((*fNodes)[in]), fNSize, ax1, ax2);
+ box->Draw();
}
- ref->Draw("p");
+
return;
}
return;
}
// check value
- if(Int_t((a+1.)*fLambda) > fNTNodes){
- fAlpha = TMath::Max(0.5, Float_t(fNTNodes)/fLambda-1.);
+ if(Int_t((a+1.)*fLambda) > GetNTNodes()){
+ fAlpha = TMath::Max(0.5, Float_t(GetNTNodes())/fLambda-1.);
Warning("TKDInterpolatorBase::SetAlpha()", Form("Interpolation neighborhood exceeds number of evaluation points. Downscale alpha to %f", fAlpha));
- printf("n[%d] nodes[%d]\n", Int_t((fAlpha+1.)*fLambda), fNTNodes);
+ printf("n[%d] nodes[%d]\n", Int_t((fAlpha+1.)*fLambda), GetNTNodes());
return;
}
fAlpha = a;
return;
}
-//__________________________________________________________________
-void TKDInterpolatorBase::SetInterpolationMethod(Bool_t on)
-{
-// Set interpolation bit to "on".
-
- if(on) fStatus += fStatus&1 ? 0 : 1;
- else fStatus += fStatus&1 ? -1 : 0;
-}
-
-
-//_________________________________________________________________
-void TKDInterpolatorBase::SetStore(Bool_t on)
-{
-// Set store bit to "on"
-
- if(on) fStatus += fStatus&2 ? 0 : 2;
- else fStatus += fStatus&2 ? -2 : 0;
-}
-
-//_________________________________________________________________
-void TKDInterpolatorBase::SetWeights(Bool_t on)
-{
-// Set weights bit to "on"
-
- if(on) fStatus += fStatus&4 ? 0 : 4;
- else fStatus += fStatus&4 ? -4 : 0;
-}
git://git.uio.no / u / mrichter / AliRoot.git / blobdiff