Updeted files for Doxygen:

- The lists of classes in EVGEN and STEER
- Added scripts for ordering README pages in the Reference manual

diff --git a/MUON/Doxyfile.latex b/MUON/Doxyfile.latex
index 2bc095f11512044cec032ad7008fc3175a18c7af..224b4cafabbc96f5a93731e4626f839869e28ebb 100644 (file)
--- a/MUON/Doxyfile.latex
+++ b/MUON/Doxyfile.latex
@@ -427,7 +427,7 @@ INPUT                  = .
 
 #FILE_PATTERNS          = *.h *.cxx *.icc *.C *.txt *.sh
 #FILE_PATTERNS          = *.h *.cxx *.icc 
-FILE_PATTERNS          = Doxymain.h README*.txt
+FILE_PATTERNS          = Doxymain.h *README*.txt
 
 # The RECURSIVE tag can be used to turn specify whether or not subdirectories 
 # should be searched for input files as well. Possible values are YES and NO. 

diff --git a/MUON/Doxymodules_EVGEN.h b/MUON/Doxymodules_EVGEN.h
index 1cdea3a1fa32ee3360c72925b8e708bef5cf2234..00466f369cc27fd00f1923b42fd35a6647411a76 100644 (file)
--- a/MUON/Doxymodules_EVGEN.h
+++ b/MUON/Doxymodules_EVGEN.h
@@ -1,6 +1,6 @@
 // $Id$
 // The class categories definitions for Doxygen
-// From EVGENLinkDef.h revision 23866 2008-02-12 07:36:44Z hristov
+// From EVGENLinkDef.h 30879 2009-02-04 15:40:50Z morsch
 
 /** @defgroup EVGEN EVGEN
  *  Category of AliRoot event generator classes
@@ -54,6 +54,9 @@
     class  AliGenCorrHF {};
     class  AliGenCosmicsParam {};
     class  AliGenKrypton {};
+    class  AliGenThermalPhotons {};
+    class  AliGenPromptPhotons {};
+    class  AliGenPileup {};
 
 /** @} */
 

diff --git a/MUON/Doxymodules_STEER.h b/MUON/Doxymodules_STEER.h
index 4ce99bbdc7121279f758adf788c95f017cdf8a5f..abbde73681d7651950a004aff3f10e788e8e8570 100644 (file)
--- a/MUON/Doxymodules_STEER.h
+++ b/MUON/Doxymodules_STEER.h
@@ -11,14 +11,17 @@
  *  @ingroup STEER
  *  @{
  */
-// From STEERBaseLinkDef.h revision 26112 2008-05-23 14:00:18Z kleinb
+// From STEERBaseLinkDef.h 30912 2009-02-06 18:04:37Z hristov
 
     enum  AliLog::EType_t {};
  
     class AliVParticle {};
+    class AliVTrack {};
+    class AliVVertex {};
     class AliVEvent {};
     class AliVHeader {};
     class AliVEventHandler {};
+    class AliVEventPool {};
 
     class AliPID {};
     class AliLog {};
@@ -53,14 +56,16 @@
     class AliMCEvent {};
     class AliMCParticle {};
 
-    class  AliMagF {};
+    class AliMagF {};
+    class AliMagWrapCheb {};
+    class AliCheb3DCalc {};
+    class AliCheb3D {};
+
 
     class AliCodeTimer {};
     class AliCodeTimer::AliPair {};
 
-    class  AliPDG {};
-
-    class AliQA {};
+    class AliPDG {};
 
     class AliTimeStamp {};
     class AliTriggerScalers {};
@@ -73,7 +78,7 @@
  *  @ingroup STEER
  *  @{
  */
-// From STEERLinkDef.h revision 26112 2008-05-23 14:00:18Z kleinb
+// From STEERLinkDef.h 30912 2009-02-06 18:04:37Z hristov
 
     enum VertexSmear_t {};
     enum VertexSource_t {};
@@ -85,10 +90,6 @@
     class  AliDetector {};
     class  AliDigit {};
     class  AliHit {};
-    class  AliDisplay {};
-    class  AliCheb3DCalc {};
-    class  AliCheb3D {};
-    class  AliMagWrapCheb {};
     class  AliLego {};
     class  AliLegoGenerator {};
     class  AliLegoGeneratorXYZ {};
@@ -98,17 +99,14 @@
     class  AliDigitNew {};
     class  AliGeometry {};
     class  AliRecPoint {};
-    class  AliSegmentation {};
     class  AliHitMap {};
     class  AliRndm {};
-    class  AliMCQA {};
     class  AliDebugVolume {};
     class  AliConfig {};
     class  AliDigitizer {};
     class  AliRunDigitizer {};
     class  AliStream {};
     class  AliMergeCombi {};
-    class  AliFieldMap {};
     class  AliGausCorr {};
     class  AliLoader {};
     class  AliDataLoader {};
@@ -183,6 +181,7 @@
 
     class AliSurveyObj {};
     class AliSurveyPoint {};
+    class AliSurveyToAlignObjs {};
 
     class AliFstream {};
     class AliCTPRawData {};
@@ -190,18 +189,40 @@
     class AliQADataMaker {};
     class AliQADataMakerSim {};
     class AliQADataMakerRec {};
+    class AliCorrQADataMakerRec {};
     class AliGlobalQADataMaker {};
     class AliQADataMakerSteer {};
     class AliQAChecker {};
+    class AliCorrQAChecker {};
+    class AliGlobalQAChecker {};
     class AliQACheckerBase {};
     class AliMillepede {};
 
-    class AliDetectorRecoParam {};
-    class AliRecoParam {};
     class AliPlaneEff {};
 
     class AliTriggerRunScalers {};
     class AliGRPPreprocessor {};
+    class AliGRPRecoParam {};
+
+    class AliRelAlignerKalman {};
+
+    class AliESDTagCreator {};
+
+    class AliGRPObject {};
+
+    class AliQA {};
+
+    class AliRunInfo {};
+    class AliEventInfo {};
+    class AliDetectorRecoParam {};
+    class AliRecoParam {};
+
+    class AliMillePede2 {};
+    class AliMillePedeRecord {};
+    class AliMinResSolve {};
+    class AliMatrixSparse {};
+    class AliMatrixSq {};
+    class AliSymMatrix {};
 
 /** @} */
 
@@ -210,7 +231,7 @@
  *  @ingroup STEER
  *  @{
  */
-// From ESDLinkDef.h revision 25661 2008-05-08 15:24:44Z cvetan
+// From ESDLinkDef.h 30522 2009-01-05 14:06:19Z belikov
 
     enum   AliESDEvent::ESDListIndex {};
 
@@ -247,13 +268,12 @@
 
     class  AliKalmanTrack {};
     class  AliExternalTrackParam {};
+    class  AliNeutralTrackParam {};
     class  AliVertexerTracks {};
     class  AliStrLine {};
     class  AliTrackPointArray {};
     class  AliTrackPoint {};
 
-    class AliESDTagCreator {};
-
     class AliTrackPointArray {};
     class AliTrackPoint {};
 
@@ -276,6 +296,10 @@
     class  AliMeanVertex {};
     class  AliESDCaloCells {};
 
+    class  AliTriggerIR {};
+
+    class  AliESDVZEROfriend {};
+
 /** @} */
 
 /** @defgroup CDB CDB
@@ -327,7 +351,7 @@
  *  @ingroup STEER
  *  @{
  */
-// From AODLinkDef.h revision 25938 2008-05-20 10:51:03Z morsch
+// From AODLinkDef.h 29409 2008-10-22 13:39:36Z kleinb
 
     enum   AliAODVertex::AODVtx_t {};
     enum   AliAODTrack::AODTrk_t {};
@@ -351,6 +375,7 @@
     class AliAODRedCov<6> {};
     class AliAODRecoDecay {};
     class AliAODv0 {};
+    class AliAODcascade {};
     class AliAODHandler {};
     class AliAODInputHandler {};
     class AliMultiAODInputHandler {};
@@ -358,6 +383,8 @@
     class AliAODTagCreator {};
     class AliAODCaloCells {};
     class AliAODDiJet {};
+    class AliAODMCParticle {};
+    class AliAODMCHeader {};
 
 /** @} */
 

diff --git a/MUON/rename_readme_back.sh b/MUON/rename_readme_back.sh
new file mode 100755 (executable)
index 0000000..4759cf6
--- /dev/null
+++ b/MUON/rename_readme_back.sh
@@ -0,0 +1,22 @@
+#!/bin/sh
+# $Id$
+
+# Script to remove the prefix in README*txt files added
+# in order to let them appear in the Reference manual, generated 
+# by Doxygen, in the same order as on the main Web page. 
+
+mv  p03_READMEbase.txt         READMEbase.txt             
+mv  p12_READMEcalib.txt        READMEcalib.txt
+mv  p06_READMEcosmics.txt      READMEcosmics.txt
+mv  p05_READMEevaluation.txt   READMEevaluation.txt
+mv  p07_READMEfast.txt         READMEfast.txt
+mv  p13_READMEgeometry.txt     READMEgeometry.txt
+mv  p09_READMEmapping.txt      READMEmapping.txt
+mv  p10_READMEmchda.txt        READMEmchda.txt
+mv  p04_READMEmchview.txt      READMEmchview.txt
+mv  p11_READMEmtrda.txt        READMEmtrda.txt
+mv  p08_READMEraw.txt          READMEraw.txt
+mv  p02_READMErec.txt          READMErec.txt
+mv  p15_READMEshuttle.txt      READMEshuttle.txt
+mv  p01_READMEsim.txt          READMEsim.txt
+mv  p14_READMEtrigger.txt      READMEtrigger.txt

diff --git a/MUON/rename_readme_for_refman.sh b/MUON/rename_readme_for_refman.sh
new file mode 100755 (executable)
index 0000000..7eb2af6
--- /dev/null
+++ b/MUON/rename_readme_for_refman.sh
@@ -0,0 +1,22 @@
+#!/bin/sh
+# $Id$
+
+# Script to add a prefix to README*tx files 
+# in order to let them appear in the Reference manual, generated 
+# by Doxygen, in the same order as on the main Web page. 
+
+mv READMEbase.txt         p03_READMEbase.txt
+mv READMEcalib.txt        p12_READMEcalib.txt
+mv READMEcosmics.txt      p06_READMEcosmics.txt
+mv READMEevaluation.txt   p05_READMEevaluation.txt
+mv READMEfast.txt         p07_READMEfast.txt
+mv READMEgeometry.txt     p13_READMEgeometry.txt
+mv READMEmapping.txt      p09_READMEmapping.txt
+mv READMEmchda.txt        p10_READMEmchda.txt
+mv READMEmchview.txt      p04_READMEmchview.txt
+mv READMEmtrda.txt        p11_READMEmtrda.txt
+mv READMEraw.txt          p08_READMEraw.txt
+mv READMErec.txt          p02_READMErec.txt
+mv READMEshuttle.txt      p15_READMEshuttle.txt
+mv READMEsim.txt          p01_READMEsim.txt
+mv READMEtrigger.txt      p14_READMEtrigger.txt