u/mrichter/AliRoot.git
4 years agodoxy: interpret other special ROOT comment flags
dberzano [Wed, 7 Jan 2015 11:37:36 +0000]
doxy: interpret other special ROOT comment flags

4 years agodoxy: correctly pick parsed date from regexp
dberzano [Wed, 7 Jan 2015 10:39:30 +0000]
doxy: correctly pick parsed date from regexp

4 years agodoxy: extract ROOT macros for picture generation
dberzano [Fri, 12 Dec 2014 18:15:19 +0000]
doxy: extract ROOT macros for picture generation

The Begin_Macro...End_Macro blocks are finally parsed, and output macro
files are created from there. Each macro will be in a subdirectory of
current source file's directory called "docimg", and it will be named
uniquely after a digest from its content.

4 years agodoxy: do not strip <H1>, <H2>...
dberzano [Thu, 11 Dec 2014 11:55:10 +0000]
doxy: do not strip <H1>, <H2>...

4 years agodoxy: convert <pre> to Markdown ~~~
dberzano [Thu, 11 Dec 2014 11:23:43 +0000]
doxy: convert <pre> to Markdown ~~~

Doxygen understands <pre> correctly (as it supports HTML), but code
blocks rendered with ~~~ are rendered with a different style.

4 years agodoxy: support multiline LaTeX
dberzano [Wed, 10 Dec 2014 18:22:36 +0000]
doxy: support multiline LaTeX

4 years agodoxy: support inline LaTeX
dberzano [Wed, 10 Dec 2014 15:51:04 +0000]
doxy: support inline LaTeX

4 years agodoxy: test scripts
dberzano [Wed, 10 Dec 2014 11:03:59 +0000]
doxy: test scripts

4 years agodoxy: specify include directories on cmdline
dberzano [Wed, 10 Dec 2014 10:44:27 +0000]
doxy: specify include directories on cmdline

4 years agodoxy: fixed calculation of class desc last line
dberzano [Wed, 10 Dec 2014 10:42:46 +0000]
doxy: fixed calculation of class desc last line

4 years agodoxy: collapse empty comments instead of removing
dberzano [Tue, 9 Dec 2014 20:07:21 +0000]
doxy: collapse empty comments instead of removing

Necessary to make thtml2doxy idempotent (i.e. 2nd pass should make no
changes)

4 years agodoxy: deal with empty/not present class comments
dberzano [Tue, 9 Dec 2014 19:25:59 +0000]
doxy: deal with empty/not present class comments

4 years agodoxy: deal with empty method comments
dberzano [Tue, 9 Dec 2014 19:14:17 +0000]
doxy: deal with empty method comments

4 years agodoxy: assertions in ctors to enforce consistency
dberzano [Tue, 9 Dec 2014 19:05:58 +0000]
doxy: assertions in ctors to enforce consistency

4 years agodoxy: do not abort if member has no description
dberzano [Tue, 9 Dec 2014 15:13:19 +0000]
doxy: do not abort if member has no description

4 years agodoxy: removed old script, kept only libclang one
dberzano [Tue, 9 Dec 2014 15:04:06 +0000]
doxy: removed old script, kept only libclang one

4 years agodoxy: strip HTML before parsing date/author
dberzano [Tue, 9 Dec 2014 14:58:32 +0000]
doxy: strip HTML before parsing date/author

4 years agodoxy: preserve internal comment indentation
dberzano [Tue, 9 Dec 2014 14:37:22 +0000]
doxy: preserve internal comment indentation

4 years agodoxy: strip some HTML tags
dberzano [Tue, 9 Dec 2014 14:18:55 +0000]
doxy: strip some HTML tags

4 years agodoxy: Ignore Begin_Html and End_Html tags
dberzano [Tue, 9 Dec 2014 14:04:09 +0000]
doxy: Ignore Begin_Html and End_Html tags

4 years agodoxy: added params description on self-doc
dberzano [Tue, 9 Dec 2014 13:55:39 +0000]
doxy: added params description on self-doc

4 years agodoxy: parse date and author(s)
dberzano [Tue, 9 Dec 2014 13:34:58 +0000]
doxy: parse date and author(s)

4 years agodoxy: always add class name
dberzano [Tue, 9 Dec 2014 13:20:38 +0000]
doxy: always add class name

4 years agodoxy: parse class description comment
dberzano [Tue, 9 Dec 2014 12:51:15 +0000]
doxy: parse class description comment

4 years agodoxy: correctly ignore first blank line in comment
dberzano [Tue, 9 Dec 2014 12:32:38 +0000]
doxy: correctly ignore first blank line in comment

4 years agodoxy: remove garbage lines from comments
dberzano [Tue, 9 Dec 2014 12:26:35 +0000]
doxy: remove garbage lines from comments

4 years agodoxy: always print line (also when parse error)
dberzano [Tue, 9 Dec 2014 11:24:07 +0000]
doxy: always print line (also when parse error)

4 years agodoxy: parsing member comments is now idempotent
dberzano [Tue, 9 Dec 2014 10:25:51 +0000]
doxy: parsing member comments is now idempotent

4 years agodoxy: minor member comment regexp fixup
dberzano [Tue, 9 Dec 2014 09:19:58 +0000]
doxy: minor member comment regexp fixup

4 years agodoxy: parse data member comments
dberzano [Mon, 8 Dec 2014 18:46:25 +0000]
doxy: parse data member comments

4 years agodoxy: do not process included files
dberzano [Mon, 8 Dec 2014 17:44:35 +0000]
doxy: do not process included files

4 years agodoxy: also consider ctor/dtor
dberzano [Mon, 8 Dec 2014 17:29:53 +0000]
doxy: also consider ctor/dtor

4 years agodoxy: separate function for parsing method desc
dberzano [Mon, 8 Dec 2014 16:39:13 +0000]
doxy: separate function for parsing method desc

4 years agodoxy: optionally output conversion to stdout
dberzano [Mon, 8 Dec 2014 16:38:42 +0000]
doxy: optionally output conversion to stdout

4 years agodoxy: THtml->Doxygen member function descriptions
dberzano [Mon, 8 Dec 2014 14:51:38 +0000]
doxy: THtml->Doxygen member function descriptions

4 years agodoxy: save columns in comment instance
dberzano [Mon, 8 Dec 2014 14:02:32 +0000]
doxy: save columns in comment instance

4 years agodoxy: comments in a separate class
dberzano [Mon, 8 Dec 2014 13:40:24 +0000]
doxy: comments in a separate class

4 years agodoxy: better comment cleanup
dberzano [Mon, 8 Dec 2014 13:13:37 +0000]
doxy: better comment cleanup

4 years agodoxy: emit comment when complete
dberzano [Mon, 8 Dec 2014 12:55:54 +0000]
doxy: emit comment when complete

4 years agodoxy: added logger to THtml parser
dberzano [Mon, 8 Dec 2014 10:42:53 +0000]
doxy: added logger to THtml parser

4 years agodoxy: multi-line block does not continue a single
dberzano [Fri, 5 Dec 2014 18:49:01 +0000]
doxy: multi-line block does not continue a single

4 years agodoxy: single-line block does not continue a multi
dberzano [Fri, 5 Dec 2014 18:44:59 +0000]
doxy: single-line block does not continue a multi

4 years agodoxy: refactor single/multiline comments
dberzano [Fri, 5 Dec 2014 18:42:45 +0000]
doxy: refactor single/multiline comments

4 years agodoxy: distinguish two comments divided by blanks
dberzano [Fri, 5 Dec 2014 18:14:22 +0000]
doxy: distinguish two comments divided by blanks

4 years agodoxy: libclang to look for comments (prototype)
dberzano [Fri, 5 Dec 2014 18:07:29 +0000]
doxy: libclang to look for comments (prototype)

4 years agodoxy: helper for THtml -> Doxygen
dberzano [Thu, 4 Dec 2014 22:31:31 +0000]
doxy: helper for THtml -> Doxygen

4 years agodoxy: generate doc for private/static members too
dberzano [Thu, 4 Dec 2014 16:26:45 +0000]
doxy: generate doc for private/static members too

4 years agodoxy: importing MUON
dberzano [Thu, 4 Dec 2014 13:42:44 +0000]
doxy: importing MUON

4 years agodoxy: honor CMake's path for Graphviz's dot
dberzano [Wed, 3 Dec 2014 13:23:34 +0000]
doxy: honor CMake's path for Graphviz's dot

4 years agodoxy: show rel paths, hide external deps
dberzano [Wed, 3 Dec 2014 13:22:54 +0000]
doxy: show rel paths, hide external deps

4 years agodoxy: added ALICE logo
dberzano [Wed, 3 Dec 2014 13:21:59 +0000]
doxy: added ALICE logo

4 years agodoxy: custom build target for documentation
dberzano [Wed, 3 Dec 2014 11:07:47 +0000]
doxy: custom build target for documentation

Generate it with "make doxygen"

4 years agoAddTask update
dgangadh [Fri, 9 Jan 2015 14:52:09 +0000]
AddTask update

4 years agoInclude q2 binning and builds from C3 fits
dgangadh [Fri, 9 Jan 2015 14:46:06 +0000]
Include q2 binning and builds from C3 fits

4 years agoFix coverity
cbianchi [Fri, 9 Jan 2015 14:11:30 +0000]
Fix coverity

4 years ago- Coverity fixes
bhess [Fri, 9 Jan 2015 07:13:52 +0000]
- Coverity fixes

4 years agoPutting PMT default gain as for p-p to prevent null signal in case of unforeseen...
coppedis [Fri, 9 Jan 2015 11:10:46 +0000]
Putting PMT default gain as for p-p to prevent null signal in case of unforeseen beam type strings

4 years agopt cut in TPC only q vector calculation
lmilano [Fri, 9 Jan 2015 10:55:44 +0000]
pt cut in TPC only q vector calculation

4 years agofix the double free in TPC (online) calibration
mkrzewic [Fri, 9 Jan 2015 09:50:35 +0000]
fix the double free in TPC (online) calibration

when running in the HLT simulation, AliReconstruction cleans the OCDB
cache which leads to a crash on AliReconstruction::Terminate().
fix is to not delete the object contained in the AliCDBEntry (which is
owner) and let AliReconstruction clean up at the end.

4 years agoExclude only phi in MC mode "exclude resonances"
miweber [Fri, 9 Jan 2015 09:22:44 +0000]
Exclude only phi in MC mode "exclude resonances"
- only for testing

4 years agoCoverity fix
cblume [Fri, 9 Jan 2015 09:09:01 +0000]
Coverity fix

4 years ago- Coverity fixes
bhess [Fri, 9 Jan 2015 07:23:35 +0000]
- Coverity fixes

4 years agocoverity fix
lietava [Thu, 8 Jan 2015 17:06:41 +0000]
coverity fix

4 years agoFixing coverity defects 24797 and 24795
zampolli [Thu, 8 Jan 2015 17:07:39 +0000]
Fixing coverity defects 24797 and 24795

4 years agoFixing coverity defect 24253
zampolli [Thu, 8 Jan 2015 17:05:57 +0000]
Fixing coverity defect 24253

4 years agoFix coverity defect 24647
zconesa [Thu, 8 Jan 2015 16:54:10 +0000]
Fix coverity defect 24647

4 years agoAdding histograms for triggers in drawing macro of correlation functions
miweber [Thu, 8 Jan 2015 16:30:49 +0000]
Adding histograms for triggers in drawing macro of correlation functions

4 years agoCMAKE: CMakeLists.example skeleton
agrigora [Thu, 8 Jan 2015 16:31:48 +0000]
CMAKE: CMakeLists.example skeleton
Added CMakeLists.example skeleton containing instruction
on how to create a dynamic/static library

4 years agouse TFile::Cp with option: copyMethod=tfilecp
mkrzewic [Thu, 8 Jan 2015 16:33:03 +0000]
use TFile::Cp with option: copyMethod=tfilecp

4 years agocoverity
fnoferin [Thu, 8 Jan 2015 16:22:41 +0000]
coverity

4 years agoALIROOT-5744 Add macro to generate the geom 2015
rgrosso [Thu, 8 Jan 2015 16:08:21 +0000]
ALIROOT-5744 Add macro to generate the geom 2015

AD is added but left off for the moment, waiting for validation.

CPV modules are added in PHOS, although only one is really installed
now.

In addition, the include paths are corrected.

4 years agoCoverity 24334, 24335
rgrosso [Thu, 8 Jan 2015 15:53:12 +0000]
Coverity 24334, 24335

There was no point in using an unsigned integer as counter, as far as I
can see.

4 years agoInstallation of FASTSIM data
hristov [Thu, 8 Jan 2015 15:28:14 +0000]
Installation of FASTSIM data

4 years agoMore FEE parameters in calibration object
mbroz [Thu, 8 Jan 2015 15:24:04 +0000]
More FEE parameters in calibration object

4 years agoAdd protection: do not replace // in raw://
dstocco [Thu, 8 Jan 2015 10:35:22 +0000]
Add protection: do not replace // in raw://

4 years agoInstall macros and scripts needed for QA
dstocco [Tue, 6 Jan 2015 19:12:34 +0000]
Install macros and scripts needed for QA

4 years agoCoverity Fix (Igor.Altsybeev@cern.ch):
miweber [Thu, 8 Jan 2015 13:38:21 +0000]
Coverity Fix (Igor.Altsybeev@cern.ch):
- warning: inline function 'Bool_t AliLRCProcess::IsPhiInRange(Double_t, Double_t, Double_t)' used but never defined [enabled by default]

4 years agoSTARLIGHT update:
cmayer [Thu, 8 Jan 2015 09:08:24 +0000]
STARLIGHT update:
 - update to r193
 - propagation of kinematical parameters for gamma-gamma processes
 - added a cut on the rapidity of the mother partice

4 years agoAvoid naming clash in container names
mfasel [Thu, 8 Jan 2015 08:49:44 +0000]
Avoid naming clash in container names

4 years agoremoving dependency to HIJING library (AMPT has its own HIJING and loading the HIJING...
jgrosseo [Thu, 8 Jan 2015 08:15:37 +0000]
removing dependency to HIJING library (AMPT has its own HIJING and loading the HIJING library from AliRoot causes a SEGV)

4 years agoMerge branch 'master' of https://git.cern.ch/reps/AliRoot
cholm [Thu, 8 Jan 2015 08:10:54 +0000]
Merge branch 'master' of https://git.cern.ch/reps/AliRoot

4 years agoAdded SPD outlier trigger bit
cholm [Thu, 8 Jan 2015 08:07:01 +0000]
Added SPD outlier trigger bit

4 years agoAlternative SD and DD for DPMJet
cholm [Thu, 8 Jan 2015 08:05:17 +0000]
Alternative SD and DD for DPMJet

4 years agoTest of using NSD events only
cholm [Thu, 8 Jan 2015 08:03:49 +0000]
Test of using NSD events only

4 years agoFix in fakes prob. calculation
shahoian [Wed, 7 Jan 2015 17:36:01 +0000]
Fix in fakes prob. calculation

4 years agoD_s systematic uncertainties in 0-10% and 20-50% (Anastasia)
fprino [Wed, 7 Jan 2015 16:56:19 +0000]
D_s systematic uncertainties in 0-10% and 20-50% (Anastasia)

4 years agoGIT: Fix for output of git rev-list to the input of wc -l
agrigora [Wed, 7 Jan 2015 16:35:14 +0000]
GIT: Fix for output of git rev-list to the input of wc -l
execute_process() Runs the given sequence of one or more
commands with the standard output of each process piped to
the standard input of the next.

4 years agofollowing up on library renaming
jgrosseo [Wed, 7 Jan 2015 16:24:54 +0000]
following up on library renaming

4 years agoGIT: use rev-list --count for > 1.7.2 and simple count for older versions
agrigora [Wed, 7 Jan 2015 16:07:27 +0000]
GIT: use rev-list --count for > 1.7.2 and simple count for older versions
git rev-list supports --count from versions > 1.7.2
For the older versions counting the lines of git rev-list output
is used for generating the serial number for ARVersion.h

4 years agoNot setting the default storage to local if the snapshot is there
zampolli [Wed, 7 Jan 2015 15:58:22 +0000]
Not setting the default storage to local if the snapshot is there

4 years ago updates from naghmeh
rbertens [Wed, 7 Jan 2015 15:03:42 +0000]
 updates from naghmeh

4 years agoUse jet pt binning for jet pt axis
mfasel [Wed, 7 Jan 2015 14:51:50 +0000]
Use jet pt binning for jet pt axis

4 years agoAdd jet base histogram in the MC jet analysis component + change name of the jet...
mfasel [Wed, 7 Jan 2015 14:43:35 +0000]
Add jet base histogram in the MC jet analysis component + change name of the jet histogram in the rec jet analysis component

4 years agoATO-91 - join attachment plots for A and C side (Patrick)
mivanov [Wed, 7 Jan 2015 14:33:34 +0000]
ATO-91 - join attachment plots for A and C side (Patrick)

4 years agoFix building task directory name
mfasel [Wed, 7 Jan 2015 14:13:09 +0000]
Fix building task directory name

4 years agoFix propagation of the trigger bits to the trigger patches
mfasel [Wed, 7 Jan 2015 14:12:35 +0000]
Fix propagation of the trigger bits to the trigger patches

4 years agoAdd Histograms for jet analysis
mfasel [Wed, 7 Jan 2015 13:50:19 +0000]
Add Histograms for jet analysis

4 years agoAdd functionality for debugging
mfasel [Wed, 7 Jan 2015 13:49:38 +0000]
Add functionality for debugging

4 years ago- Allow for different track cuts
mfasel [Wed, 7 Jan 2015 12:42:54 +0000]
- Allow for different track cuts
- Use special binning for jet pt
- Comment out redundant jet information tasks

4 years agoMinor updates and add participant information to output for fast simulations
cholm [Wed, 7 Jan 2015 13:55:46 +0000]
Minor updates and add participant information to output for fast simulations