+
/**************************************************************************
* Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. *
* *
///////////////////////////////////////////////////////////////////////////////
// //
-// TRD cluster finder base class //
+// TRD cluster finder //
// //
///////////////////////////////////////////////////////////////////////////////
-#include <TROOT.h>
+#include <TF1.h>
#include <TTree.h>
+#include <TH1.h>
#include <TFile.h>
#include <TObjArray.h>
#include "AliRunLoader.h"
#include "AliLoader.h"
+#include "AliRawReader.h"
#include "AliLog.h"
+#include "AliAlignObj.h"
#include "AliTRDclusterizer.h"
#include "AliTRDcluster.h"
#include "AliTRDgeometry.h"
+#include "AliTRDdataArrayF.h"
+#include "AliTRDdataArrayI.h"
+#include "AliTRDdigitsManager.h"
+#include "AliTRDrawData.h"
#include "AliTRDcalibDB.h"
+#include "AliTRDSimParam.h"
+#include "AliTRDRecParam.h"
#include "AliTRDCommonParam.h"
+#include "AliTRDtransform.h"
+#include "AliTRDSignalIndex.h"
+#include "AliTRDRawStream.h"
+#include "AliTRDRawStreamV2.h"
+#include "AliTRDfeeParam.h"
+
+#include "Cal/AliTRDCalROC.h"
+#include "Cal/AliTRDCalDet.h"
ClassImp(AliTRDclusterizer)
,fRunLoader(NULL)
,fClusterTree(NULL)
,fRecPoints(NULL)
+ ,fDigitsManager(NULL)
+ ,fAddLabels(kTRUE)
+ ,fRawVersion(2)
+ ,fIndexesOut(NULL)
+ ,fIndexesMaxima(NULL)
+ ,fTransform(NULL)
{
//
// AliTRDclusterizer default constructor
//
+ fRawVersion = AliTRDfeeParam::Instance()->GetRAWversion();
+
}
//_____________________________________________________________________________
-AliTRDclusterizer::AliTRDclusterizer(const Text_t* name, const Text_t* title)
+AliTRDclusterizer::AliTRDclusterizer(const Text_t *name, const Text_t *title)
:TNamed(name,title)
,fRunLoader(NULL)
,fClusterTree(NULL)
,fRecPoints(NULL)
+ ,fDigitsManager(new AliTRDdigitsManager())
+ ,fAddLabels(kTRUE)
+ ,fRawVersion(2)
+ ,fIndexesOut(NULL)
+ ,fIndexesMaxima(NULL)
+ ,fTransform(new AliTRDtransform(0))
{
//
// AliTRDclusterizer constructor
//
+ fDigitsManager->CreateArrays();
+
+ fRawVersion = AliTRDfeeParam::Instance()->GetRAWversion();
+
}
//_____________________________________________________________________________
,fRunLoader(NULL)
,fClusterTree(NULL)
,fRecPoints(NULL)
+ ,fDigitsManager(NULL)
+ ,fAddLabels(kTRUE)
+ ,fRawVersion(2)
+ ,fIndexesOut(NULL)
+ ,fIndexesMaxima(NULL)
+ ,fTransform(NULL)
{
//
// AliTRDclusterizer copy constructor
// AliTRDclusterizer destructor
//
- if (fRecPoints) {
- fRecPoints->Delete();
- delete fRecPoints;
- }
+ if (fRecPoints)
+ {
+ fRecPoints->Delete();
+ delete fRecPoints;
+ }
+
+ if (fDigitsManager)
+ {
+ delete fDigitsManager;
+ fDigitsManager = NULL;
+ }
+
+ if (fIndexesOut)
+ {
+ delete fIndexesOut;
+ fIndexesOut = NULL;
+ }
+
+ if (fIndexesMaxima)
+ {
+ delete fIndexesMaxima;
+ fIndexesMaxima = NULL;
+ }
+
+ if (fTransform)
+ {
+ delete fTransform;
+ fTransform = NULL;
+ }
}
// Assignment operator
//
- if (this != &c) {
- ((AliTRDclusterizer &) c).Copy(*this);
- }
+ if (this != &c)
+ {
+ ((AliTRDclusterizer &) c).Copy(*this);
+ }
return *this;
}
// Copy function
//
- ((AliTRDclusterizer &) c).fClusterTree = NULL;
- ((AliTRDclusterizer &) c).fRecPoints = NULL;
+ ((AliTRDclusterizer &) c).fClusterTree = NULL;
+ ((AliTRDclusterizer &) c).fRecPoints = NULL;
+ ((AliTRDclusterizer &) c).fDigitsManager = NULL;
+ ((AliTRDclusterizer &) c).fAddLabels = fAddLabels;
+ ((AliTRDclusterizer &) c).fRawVersion = fRawVersion;
+ ((AliTRDclusterizer &) c).fIndexesOut = NULL;
+ ((AliTRDclusterizer &) c).fIndexesMaxima = NULL;
+ ((AliTRDclusterizer &) c).fTransform = NULL;
}
detRecPoints->AddLast(c);
}
else {
- AliError(Form("Attempt to write a cluster with unexpected detector index: got=%d expected=%d\n", c->GetDetector(), det));
+ AliError(Form("Attempt to write a cluster with unexpected detector index: got=%d expected=%d\n"
+ ,c->GetDetector()
+ ,det));
}
}
fClusterTree->Fill();
delete detRecPoints;
-
- //AliInfo(Form("Writing %d clusters to tree", nRecPoints));
return kTRUE;
}
//_____________________________________________________________________________
-Double_t AliTRDclusterizer::CalcXposFromTimebin(Float_t timebin, Int_t idet
- , Int_t col, Int_t row)
+void AliTRDclusterizer::ResetHelperIndexes(AliTRDSignalIndex *indexesIn)
+{
+ //
+ // Reset the helper indexes
+ //
+
+ if (fIndexesOut)
+ {
+ // carefull here - we assume that only row number may change - most probable
+ if (indexesIn->GetNrow() <= fIndexesOut->GetNrow())
+ fIndexesOut->ResetContent();
+ else
+ fIndexesOut->ResetContentConditional(indexesIn->GetNrow()
+ , indexesIn->GetNcol()
+ , indexesIn->GetNtime());
+ }
+ else
+ {
+ fIndexesOut = new AliTRDSignalIndex(indexesIn->GetNrow()
+ , indexesIn->GetNcol()
+ , indexesIn->GetNtime());
+ }
+
+ if (fIndexesMaxima)
+ {
+ // carefull here - we assume that only row number may change - most probable
+ if (indexesIn->GetNrow() <= fIndexesMaxima->GetNrow())
+ {
+ fIndexesMaxima->ResetContent();
+ }
+ else
+ {
+ fIndexesMaxima->ResetContentConditional(indexesIn->GetNrow()
+ , indexesIn->GetNcol()
+ , indexesIn->GetNtime());
+ }
+ }
+ else
+ {
+ fIndexesMaxima = new AliTRDSignalIndex(indexesIn->GetNrow()
+ , indexesIn->GetNcol()
+ , indexesIn->GetNtime());
+ }
+
+}
+
+//_____________________________________________________________________________
+Bool_t AliTRDclusterizer::ReadDigits()
+{
+ //
+ // Reads the digits arrays from the input aliroot file
+ //
+
+ if (!fRunLoader) {
+ AliError("No run loader available");
+ return kFALSE;
+ }
+
+ AliLoader* loader = fRunLoader->GetLoader("TRDLoader");
+ if (!loader->TreeD()) {
+ loader->LoadDigits();
+ }
+
+ // Read in the digit arrays
+ return (fDigitsManager->ReadDigits(loader->TreeD()));
+
+}
+
+//_____________________________________________________________________________
+Bool_t AliTRDclusterizer::ReadDigits(TTree *digitsTree)
+{
+ //
+ // Reads the digits arrays from the input tree
+ //
+
+ // Read in the digit arrays
+ return (fDigitsManager->ReadDigits(digitsTree));
+
+}
+
+//_____________________________________________________________________________
+Bool_t AliTRDclusterizer::ReadDigits(AliRawReader *rawReader)
+{
+ //
+ // Reads the digits arrays from the ddl file
+ //
+
+ AliTRDrawData raw;
+ fDigitsManager = raw.Raw2Digits(rawReader);
+
+ return kTRUE;
+
+}
+
+//_____________________________________________________________________________
+Bool_t AliTRDclusterizer::MakeClusters()
+{
+ //
+ // Creates clusters from digits
+ //
+
+ // Propagate info from the digits manager
+ if (fAddLabels == kTRUE)
+ {
+ fAddLabels = fDigitsManager->UsesDictionaries();
+ }
+
+ Bool_t fReturn = kTRUE;
+ for (Int_t i = 0; i < AliTRDgeometry::kNdet; i++)
+ {
+
+ AliTRDdataArrayI *digitsIn = fDigitsManager->GetDigits(i);
+ // This is to take care of switched off super modules
+ if (digitsIn->GetNtime() == 0)
+ {
+ continue;
+ }
+ digitsIn->Expand();
+ AliTRDSignalIndex* indexes = fDigitsManager->GetIndexes(i);
+ if (indexes->IsAllocated() == kFALSE)
+ {
+ fDigitsManager->BuildIndexes(i);
+ }
+
+ Bool_t fR = kFALSE;
+ if (indexes->HasEntry())
+ {
+ if (fAddLabels)
+ {
+ for (Int_t iDict = 0; iDict < AliTRDdigitsManager::kNDict; iDict++)
+ {
+ AliTRDdataArrayI *tracksIn = 0;
+ tracksIn = fDigitsManager->GetDictionary(i,iDict);
+ tracksIn->Expand();
+ }
+ }
+ fR = MakeClusters(i);
+ fReturn = fR && fReturn;
+ }
+
+ if (fR == kFALSE)
+ {
+ WriteClusters(i);
+ ResetRecPoints();
+ }
+
+ // No compress just remove
+ fDigitsManager->RemoveDigits(i);
+ fDigitsManager->RemoveDictionaries(i);
+ fDigitsManager->ClearIndexes(i);
+
+ }
+
+ return fReturn;
+
+}
+
+//_____________________________________________________________________________
+Bool_t AliTRDclusterizer::Raw2Clusters(AliRawReader *rawReader)
+{
+ //
+ // Creates clusters from raw data
+ //
+
+ AliTRDdataArrayI *digits = 0;
+ AliTRDdataArrayI *track0 = 0;
+ AliTRDdataArrayI *track1 = 0;
+ AliTRDdataArrayI *track2 = 0;
+
+ AliTRDSignalIndex *indexes = 0;
+
+ // Create the digits manager
+ if (!fDigitsManager)
+ {
+ fDigitsManager = new AliTRDdigitsManager();
+ fDigitsManager->CreateArrays();
+ }
+
+ AliTRDRawStreamV2 input(rawReader);
+ input.SetRawVersion( fRawVersion );
+ input.Init();
+
+ AliInfo(Form("Stream version: %s", input.IsA()->GetName()));
+
+ // Loop through the digits
+ Int_t lastdet = -1;
+ Int_t det = 0;
+ Int_t it = 0;
+ while (input.Next())
+ {
+
+ det = input.GetDet();
+
+ if (det != lastdet)
+ {
+
+ if (lastdet != -1)
+ {
+ digits = fDigitsManager->GetDigits(lastdet);
+ Bool_t iclusterBranch = kFALSE;
+ if (indexes->HasEntry())
+ iclusterBranch = MakeClusters(lastdet);
+ if (iclusterBranch == kFALSE)
+ {
+ WriteClusters(lastdet);
+ ResetRecPoints();
+ }
+ }
+
+ if (digits)
+ {
+ fDigitsManager->RemoveDigits(lastdet);
+ fDigitsManager->RemoveDictionaries(lastdet);
+ fDigitsManager->ClearIndexes(lastdet);
+ }
+
+ lastdet = det;
+
+ // Add a container for the digits of this detector
+ digits = fDigitsManager->GetDigits(det);
+ track0 = fDigitsManager->GetDictionary(det,0);
+ track1 = fDigitsManager->GetDictionary(det,1);
+ track2 = fDigitsManager->GetDictionary(det,2);
+
+ // Allocate memory space for the digits buffer
+ if (digits->GetNtime() == 0)
+ {
+ //AliDebug(5, Form("Alloc digits for det %d", det));
+ digits->Allocate(input.GetMaxRow(),input.GetMaxCol(), input.GetNumberOfTimeBins());
+ track0->Allocate(input.GetMaxRow(),input.GetMaxCol(), input.GetNumberOfTimeBins());
+ track1->Allocate(input.GetMaxRow(),input.GetMaxCol(), input.GetNumberOfTimeBins());
+ track2->Allocate(input.GetMaxRow(),input.GetMaxCol(), input.GetNumberOfTimeBins());
+ }
+
+ indexes = fDigitsManager->GetIndexes(det);
+ indexes->SetSM(input.GetSM());
+ indexes->SetStack(input.GetStack());
+ indexes->SetLayer(input.GetLayer());
+ indexes->SetDetNumber(det);
+ if (indexes->IsAllocated() == kFALSE)
+ {
+ indexes->Allocate(input.GetMaxRow(), input.GetMaxCol(), input.GetNumberOfTimeBins());
+ }
+
+ }
+
+ for (it = 0; it < 3; it++)
+ {
+ if ( input.GetTimeBin() + it < input.GetNumberOfTimeBins() )
+ {
+ if (input.GetSignals()[it] > 0)
+ {
+ digits->SetDataUnchecked(input.GetRow(), input.GetCol(),
+ input.GetTimeBin() + it, input.GetSignals()[it]);
+
+ indexes->AddIndexTBin(input.GetRow(), input.GetCol(),
+ input.GetTimeBin() + it);
+ track0->SetDataUnchecked(input.GetRow(), input.GetCol(),
+ input.GetTimeBin() + it, 0);
+ track1->SetDataUnchecked(input.GetRow(), input.GetCol(),
+ input.GetTimeBin() + it, 0);
+ track2->SetDataUnchecked(input.GetRow(), input.GetCol(),
+ input.GetTimeBin() + it, 0);
+ }
+ }
+ }
+
+ }
+
+ if (lastdet != -1)
+ {
+ Bool_t iclusterBranch = kFALSE;
+ if (indexes->HasEntry())
+ {
+ iclusterBranch = MakeClusters(lastdet);
+ }
+ if (iclusterBranch == kFALSE)
+ {
+ WriteClusters(lastdet);
+ ResetRecPoints();
+ }
+ //MakeClusters(lastdet);
+ if (digits)
+ {
+ fDigitsManager->RemoveDigits(lastdet);
+ fDigitsManager->RemoveDictionaries(lastdet);
+ fDigitsManager->ClearIndexes(lastdet);
+ }
+ }
+
+ delete fDigitsManager;
+ fDigitsManager = NULL;
+ return kTRUE;
+
+}
+
+//_____________________________________________________________________________
+Bool_t AliTRDclusterizer::Raw2ClustersChamber(AliRawReader *rawReader)
+{
+ //
+ // Creates clusters from raw data
+ //
+
+ // Create the digits manager
+ if (!fDigitsManager)
+ {
+ fDigitsManager = new AliTRDdigitsManager();
+ fDigitsManager->CreateArrays();
+ }
+
+ fDigitsManager->SetUseDictionaries(fAddLabels);
+
+ AliTRDRawStreamV2 input(rawReader);
+ input.SetRawVersion( fRawVersion );
+ input.Init();
+
+ AliInfo(Form("Stream version: %s", input.IsA()->GetName()));
+
+ Int_t det = 0;
+ while ((det = input.NextChamber(fDigitsManager)) >= 0)
+ {
+ Bool_t iclusterBranch = kFALSE;
+ if (fDigitsManager->GetIndexes(det)->HasEntry())
+ {
+ iclusterBranch = MakeClusters(det);
+ }
+ if (iclusterBranch == kFALSE)
+ {
+ WriteClusters(det);
+ ResetRecPoints();
+ }
+ fDigitsManager->RemoveDigits(det);
+ fDigitsManager->RemoveDictionaries(det);
+ fDigitsManager->ClearIndexes(det);
+ }
+
+ delete fDigitsManager;
+ fDigitsManager = NULL;
+ return kTRUE;
+
+}
+
+//_____________________________________________________________________________
+Bool_t AliTRDclusterizer::MakeClusters(Int_t det)
+{
+ //
+ // Generates the cluster.
+ //
+
+ // Get the digits
+ // digits should be expanded beforehand!
+ // digitsIn->Expand();
+ AliTRDdataArrayI *digitsIn = fDigitsManager->GetDigits(det);
+
+ // This is to take care of switched off super modules
+ if (digitsIn->GetNtime() == 0)
+ {
+ return kFALSE;
+ }
+
+ AliTRDSignalIndex *indexesIn = fDigitsManager->GetIndexes(det);
+ if (indexesIn->IsAllocated() == kFALSE)
+ {
+ AliError("Indexes do not exist!");
+ return kFALSE;
+ }
+
+ AliTRDcalibDB *calibration = AliTRDcalibDB::Instance();
+ if (!calibration)
+ {
+ AliFatal("No AliTRDcalibDB instance available\n");
+ return kFALSE;
+ }
+
+ AliTRDRecParam *recParam = AliTRDRecParam::Instance();
+ if (!recParam)
+ {
+ AliError("No AliTRDRecParam instance available\n");
+ return kFALSE;
+ }
+
+ // ADC thresholds
+ // There is no ADC threshold anymore, and simParam should not be used in clusterizer. KO
+ Float_t ADCthreshold = 0;
+
+ // Threshold value for the maximum
+ Float_t maxThresh = recParam->GetClusMaxThresh();
+ // Threshold value for the digit signal
+ Float_t sigThresh = recParam->GetClusSigThresh();
+
+ // Iteration limit for unfolding procedure
+ const Float_t kEpsilon = 0.01;
+ const Int_t kNclus = 3;
+ const Int_t kNsig = 5;
+
+ Int_t iUnfold = 0;
+ Double_t ratioLeft = 1.0;
+ Double_t ratioRight = 1.0;
+
+ Double_t padSignal[kNsig];
+ Double_t clusterSignal[kNclus];
+
+ Int_t icham = indexesIn->GetChamber();
+ Int_t iplan = indexesIn->GetPlane();
+ Int_t isect = indexesIn->GetSM();
+
+ // Start clustering in the chamber
+
+ Int_t idet = AliTRDgeometry::GetDetector(iplan,icham,isect);
+ if (idet != det)
+ {
+ AliError("Strange Detector number Missmatch!");
+ return kFALSE;
+ }
+
+ // TRD space point transformation
+ fTransform->SetDetector(det);
+
+ Int_t ilayer = AliGeomManager::kTRD1 + iplan;
+ Int_t imodule = icham + AliTRDgeometry::Ncham() * isect;
+ UShort_t volid = AliGeomManager::LayerToVolUID(ilayer,imodule);
+
+ Int_t nColMax = digitsIn->GetNcol();
+ Int_t nTimeTotal = digitsIn->GetNtime();
+
+ // Detector wise calibration object for the gain factors
+ const AliTRDCalDet *calGainFactorDet = calibration->GetGainFactorDet();
+ // Calibration object with pad wise values for the gain factors
+ AliTRDCalROC *calGainFactorROC = calibration->GetGainFactorROC(idet);
+ // Calibration value for chamber wise gain factor
+ Float_t calGainFactorDetValue = calGainFactorDet->GetValue(idet);
+
+ Int_t nClusters = 0;
+
+ AliTRDdataArrayF *digitsOut = new AliTRDdataArrayF(digitsIn->GetNrow()
+ ,digitsIn->GetNcol()
+ ,digitsIn->GetNtime());
+
+ ResetHelperIndexes(indexesIn);
+
+ // Apply the gain and the tail cancelation via digital filter
+ TailCancelation(digitsIn
+ ,digitsOut
+ ,indexesIn
+ ,fIndexesOut
+ ,nTimeTotal
+ ,ADCthreshold
+ ,calGainFactorROC
+ ,calGainFactorDetValue);
+
+ Int_t row = 0;
+ Int_t col = 0;
+ Int_t time = 0;
+ Int_t iPad = 0;
+
+ fIndexesOut->ResetCounters();
+ while (fIndexesOut->NextRCTbinIndex(row, col, time))
+ {
+
+ Float_t signalM = TMath::Abs(digitsOut->GetDataUnchecked(row,col,time));
+
+ // Look for the maximum
+ if (signalM >= maxThresh)
+ {
+
+ if (col + 1 >= nColMax || col-1 < 0)
+ continue;
+
+ Float_t signalL = TMath::Abs(digitsOut->GetDataUnchecked(row,col+1,time));
+ Float_t signalR = TMath::Abs(digitsOut->GetDataUnchecked(row,col-1,time));
+
+ if ((TMath::Abs(signalL) <= signalM) &&
+ (TMath::Abs(signalR) < signalM))
+ {
+ if ((TMath::Abs(signalL) >= sigThresh) ||
+ (TMath::Abs(signalR) >= sigThresh))
+ {
+ // Maximum found, mark the position by a negative signal
+ digitsOut->SetDataUnchecked(row,col,time,-signalM);
+ fIndexesMaxima->AddIndexTBin(row,col,time);
+ }
+ }
+
+ }
+
+ }
+
+ // The index to the first cluster of a given ROC
+ Int_t firstClusterROC = -1;
+ // The number of cluster in a given ROC
+ Int_t nClusterROC = 0;
+
+ // Now check the maxima and calculate the cluster position
+ fIndexesMaxima->ResetCounters();
+ while (fIndexesMaxima->NextRCTbinIndex(row, col, time))
+ {
+
+ // Maximum found ?
+ if (digitsOut->GetDataUnchecked(row,col,time) < 0.0)
+ {
+
+ for (iPad = 0; iPad < kNclus; iPad++)
+ {
+ Int_t iPadCol = col - 1 + iPad;
+ clusterSignal[iPad] = TMath::Abs(digitsOut->GetDataUnchecked(row,iPadCol,time));
+ }
+
+ // Count the number of pads in the cluster
+ Int_t nPadCount = 0;
+ Int_t ii;
+ // Look to the left
+ ii = 0;
+ while (TMath::Abs(digitsOut->GetDataUnchecked(row,col-ii ,time)) >= sigThresh)
+ {
+ nPadCount++;
+ ii++;
+ if (col-ii < 0) break;
+ }
+ // Look to the right
+ ii = 0;
+ while (TMath::Abs(digitsOut->GetDataUnchecked(row,col+ii+1,time)) >= sigThresh)
+ {
+ nPadCount++;
+ ii++;
+ if (col+ii+1 >= nColMax) break;
+ }
+ nClusters++;
+
+ // Look for 5 pad cluster with minimum in the middle
+ Bool_t fivePadCluster = kFALSE;
+ if (col < (nColMax - 3))
+ {
+ if (digitsOut->GetDataUnchecked(row,col+2,time) < 0)
+ {
+ fivePadCluster = kTRUE;
+ }
+ if ((fivePadCluster) && (col < (nColMax - 5)))
+ {
+ if (digitsOut->GetDataUnchecked(row,col+4,time) >= sigThresh)
+ {
+ fivePadCluster = kFALSE;
+ }
+ }
+ if ((fivePadCluster) && (col > 1))
+ {
+ if (digitsOut->GetDataUnchecked(row,col-2,time) >= sigThresh)
+ {
+ fivePadCluster = kFALSE;
+ }
+ }
+ }
+
+ // 5 pad cluster
+ // Modify the signal of the overlapping pad for the left part
+ // of the cluster which remains from a previous unfolding
+ if (iUnfold)
+ {
+ clusterSignal[0] *= ratioLeft;
+ iUnfold = 0;
+ }
+
+ // Unfold the 5 pad cluster
+ if (fivePadCluster)
+ {
+ for (iPad = 0; iPad < kNsig; iPad++)
+ {
+ padSignal[iPad] = TMath::Abs(digitsOut->GetDataUnchecked(row
+ ,col-1+iPad
+ ,time));
+ }
+ // Unfold the two maxima and set the signal on
+ // the overlapping pad to the ratio
+ ratioRight = Unfold(kEpsilon,iplan,padSignal);
+ ratioLeft = 1.0 - ratioRight;
+ clusterSignal[2] *= ratioRight;
+ iUnfold = 1;
+ }
+
+ // The position of the cluster in COL direction relative to the center pad (pad units)
+ Double_t clusterPosCol = 0.0;
+ if (recParam->LUTOn())
+ {
+ // Calculate the position of the cluster by using the
+ // lookup table method
+ clusterPosCol = recParam->LUTposition(iplan
+ ,clusterSignal[0]
+ ,clusterSignal[1]
+ ,clusterSignal[2]);
+ }
+ else
+ {
+ // Calculate the position of the cluster by using the
+ // center of gravity method
+ for (Int_t i = 0; i < kNsig; i++)
+ {
+ padSignal[i] = 0.0;
+ }
+ padSignal[2] = TMath::Abs(digitsOut->GetDataUnchecked(row,col ,time)); // Central pad
+ padSignal[1] = TMath::Abs(digitsOut->GetDataUnchecked(row,col-1,time)); // Left pad
+ padSignal[3] = TMath::Abs(digitsOut->GetDataUnchecked(row,col+1,time)); // Right pad
+ if ((col > 2) &&
+ (TMath::Abs(digitsOut->GetDataUnchecked(row,col-2,time)) < padSignal[1]))
+ {
+ padSignal[0] = TMath::Abs(digitsOut->GetDataUnchecked(row,col-2,time));
+ }
+ if ((col < nColMax - 3) &&
+ (TMath::Abs(digitsOut->GetDataUnchecked(row,col+2,time)) < padSignal[3]))
+ {
+ padSignal[4] = TMath::Abs(digitsOut->GetDataUnchecked(row,col+2,time));
+ }
+ clusterPosCol = GetCOG(padSignal);
+ }
+
+ // Store the amplitudes of the pads in the cluster for later analysis
+ Short_t signals[7] = { 0, 0, 0, 0, 0, 0, 0 };
+ for (Int_t jPad = col-3; jPad <= col+3; jPad++)
+ {
+ if ((jPad < 0) ||
+ (jPad >= nColMax-1))
+ {
+ continue;
+ }
+ signals[jPad-col+3] = TMath::Nint(TMath::Abs(digitsOut->GetDataUnchecked(row,jPad,time)));
+ }
+
+ // Transform the local cluster coordinates into calibrated
+ // space point positions defined in the local tracking system.
+ // Here the calibration for T0, Vdrift and ExB is applied as well.
+ Double_t clusterXYZ[6];
+ clusterXYZ[0] = clusterPosCol;
+ clusterXYZ[1] = clusterSignal[0];
+ clusterXYZ[2] = clusterSignal[1];
+ clusterXYZ[3] = clusterSignal[2];
+ clusterXYZ[4] = 0.0;
+ clusterXYZ[5] = 0.0;
+ Int_t clusterRCT[3];
+ clusterRCT[0] = row;
+ clusterRCT[1] = col;
+ clusterRCT[2] = 0;
+ fTransform->Transform(clusterXYZ,clusterRCT,((UInt_t) time),0);
+
+ // Add the cluster to the output array
+ // The track indices will be stored later
+ Float_t clusterPos[3];
+ clusterPos[0] = clusterXYZ[0];
+ clusterPos[1] = clusterXYZ[1];
+ clusterPos[2] = clusterXYZ[2];
+ Float_t clusterSig[2];
+ clusterSig[0] = clusterXYZ[4];
+ clusterSig[1] = clusterXYZ[5];
+ Double_t clusterCharge = clusterXYZ[3];
+ Char_t clusterTimeBin = ((Char_t) clusterRCT[2]);
+ AliTRDcluster *cluster = new AliTRDcluster(idet
+ ,clusterCharge
+ ,clusterPos
+ ,clusterSig
+ ,0x0
+ ,((Char_t) nPadCount)
+ ,signals
+ ,((UChar_t) col)
+ ,((UChar_t) row)
+ ,((UChar_t) time)
+ ,clusterTimeBin
+ ,clusterPosCol
+ ,volid);
+
+ // Temporarily store the row, column and time bin of the center pad
+ // Used to later on assign the track indices
+ cluster->SetLabel( row,0);
+ cluster->SetLabel( col,1);
+ cluster->SetLabel(time,2);
+
+ RecPoints()->Add(cluster);
+
+ // Store the index of the first cluster in the current ROC
+ if (firstClusterROC < 0)
+ {
+ firstClusterROC = RecPoints()->GetEntriesFast() - 1;
+ }
+
+ // Count the number of cluster in the current ROC
+ nClusterROC++;
+
+ } // if: Maximum found ?
+
+ }
+
+ delete digitsOut;
+
+ if (fAddLabels)
+ {
+ AddLabels(idet, firstClusterROC, nClusterROC);
+ }
+
+ // Write the cluster and reset the array
+ WriteClusters(idet);
+ ResetRecPoints();
+
+ return kTRUE;
+
+}
+
+//_____________________________________________________________________________
+Bool_t AliTRDclusterizer::AddLabels(Int_t idet, Int_t firstClusterROC, Int_t nClusterROC)
{
//
- // Calculates the local x position in the detector from the timebin,
- // depends on the drift velocity and t0
+ // Add the track indices to the found clusters
//
- AliTRDcalibDB *calibration = AliTRDcalibDB::Instance();
+ const Int_t kNclus = 3;
+ const Int_t kNdict = AliTRDdigitsManager::kNDict;
+ const Int_t kNtrack = kNdict * kNclus;
+
+ Int_t iClusterROC = 0;
+
+ Int_t row = 0;
+ Int_t col = 0;
+ Int_t time = 0;
+ Int_t iPad = 0;
+
+ // Temporary array to collect the track indices
+ Int_t *idxTracks = new Int_t[kNtrack*nClusterROC];
+
+ // Loop through the dictionary arrays one-by-one
+ // to keep memory consumption low
+ AliTRDdataArrayI *tracksIn = 0;
+ for (Int_t iDict = 0; iDict < kNdict; iDict++) {
+
+ // tracksIn should be expanded beforehand!
+ tracksIn = fDigitsManager->GetDictionary(idet,iDict);
+
+ // Loop though the clusters found in this ROC
+ for (iClusterROC = 0; iClusterROC < nClusterROC; iClusterROC++) {
+
+ AliTRDcluster *cluster = (AliTRDcluster *)
+ RecPoints()->UncheckedAt(firstClusterROC+iClusterROC);
+ row = cluster->GetLabel(0);
+ col = cluster->GetLabel(1);
+ time = cluster->GetLabel(2);
+
+ for (iPad = 0; iPad < kNclus; iPad++) {
+ Int_t iPadCol = col - 1 + iPad;
+ Int_t index = tracksIn->GetDataUnchecked(row,iPadCol,time) - 1;
+ idxTracks[3*iPad+iDict + iClusterROC*kNtrack] = index;
+ }
+
+ }
+
+ }
+
+ // Copy the track indices into the cluster
+ // Loop though the clusters found in this ROC
+ for (iClusterROC = 0; iClusterROC < nClusterROC; iClusterROC++) {
+
+ AliTRDcluster *cluster = (AliTRDcluster *)
+ RecPoints()->UncheckedAt(firstClusterROC+iClusterROC);
+ cluster->SetLabel(-9999,0);
+ cluster->SetLabel(-9999,1);
+ cluster->SetLabel(-9999,2);
+
+ cluster->AddTrackIndex(&idxTracks[iClusterROC*kNtrack]);
+
+ }
+
+ delete [] idxTracks;
+
+ return kTRUE;
+
+}
+
+//_____________________________________________________________________________
+Double_t AliTRDclusterizer::GetCOG(Double_t signal[5])
+{
+ //
+ // Get COG position
+ // Used for clusters with more than 3 pads - where LUT not applicable
+ //
+
+ Double_t sum = signal[0]
+ + signal[1]
+ + signal[2]
+ + signal[3]
+ + signal[4];
+
+ Double_t res = (0.0 * (-signal[0] + signal[4])
+ + (-signal[1] + signal[3])) / sum;
+
+ return res;
+
+}
+
+//_____________________________________________________________________________
+Double_t AliTRDclusterizer::Unfold(Double_t eps, Int_t plane, Double_t *padSignal)
+{
+ //
+ // Method to unfold neighbouring maxima.
+ // The charge ratio on the overlapping pad is calculated
+ // until there is no more change within the range given by eps.
+ // The resulting ratio is then returned to the calling method.
+ //
+
+ AliTRDcalibDB *calibration = AliTRDcalibDB::Instance();
if (!calibration) {
- AliError("Cannot find calibration object");
- return -1;
+ AliError("No AliTRDcalibDB instance available\n");
+ return kFALSE;
}
- AliTRDCommonParam *parCom = AliTRDCommonParam::Instance();
- if (!parCom) {
- AliError("Could not get common parameters\n");
- return kFALSE;
+
+ Int_t irc = 0;
+ Int_t itStep = 0; // Count iteration steps
+
+ Double_t ratio = 0.5; // Start value for ratio
+ Double_t prevRatio = 0.0; // Store previous ratio
+
+ Double_t newLeftSignal[3] = { 0.0, 0.0, 0.0 }; // Array to store left cluster signal
+ Double_t newRightSignal[3] = { 0.0, 0.0, 0.0 }; // Array to store right cluster signal
+ Double_t newSignal[3] = { 0.0, 0.0, 0.0 };
+
+ // Start the iteration
+ while ((TMath::Abs(prevRatio - ratio) > eps) && (itStep < 10)) {
+
+ itStep++;
+ prevRatio = ratio;
+
+ // Cluster position according to charge ratio
+ Double_t maxLeft = (ratio*padSignal[2] - padSignal[0])
+ / (padSignal[0] + padSignal[1] + ratio*padSignal[2]);
+ Double_t maxRight = (padSignal[4] - (1-ratio)*padSignal[2])
+ / ((1.0 - ratio)*padSignal[2] + padSignal[3] + padSignal[4]);
+
+ // Set cluster charge ratio
+ irc = calibration->PadResponse(1.0,maxLeft ,plane,newSignal);
+ Double_t ampLeft = padSignal[1] / newSignal[1];
+ irc = calibration->PadResponse(1.0,maxRight,plane,newSignal);
+ Double_t ampRight = padSignal[3] / newSignal[1];
+
+ // Apply pad response to parameters
+ irc = calibration->PadResponse(ampLeft ,maxLeft ,plane,newLeftSignal );
+ irc = calibration->PadResponse(ampRight,maxRight,plane,newRightSignal);
+
+ // Calculate new overlapping ratio
+ ratio = TMath::Min((Double_t) 1.0
+ ,newLeftSignal[2] / (newLeftSignal[2] + newRightSignal[0]));
+
}
- Float_t vdrift = calibration->GetVdrift(idet,col,row);
- Float_t t0 = calibration->GetT0(idet,col,row);
- Float_t samplingFrequency = parCom->GetSamplingFrequency();
+ return ratio;
+
+}
- timebin -= t0;
+//_____________________________________________________________________________
+void AliTRDclusterizer::TailCancelation(AliTRDdataArrayI *digitsIn
+ , AliTRDdataArrayF *digitsOut
+ , AliTRDSignalIndex *indexesIn
+ , AliTRDSignalIndex *indexesOut
+ , Int_t nTimeTotal
+ , Float_t ADCthreshold
+ , AliTRDCalROC *calGainFactorROC
+ , Float_t calGainFactorDetValue)
+{
+ //
+ // Applies the tail cancelation and gain factors:
+ // Transform digitsIn to digitsOut
+ //
+
+ Int_t iRow = 0;
+ Int_t iCol = 0;
+ Int_t iTime = 0;
+
+ AliTRDRecParam *recParam = AliTRDRecParam::Instance();
+ if (!recParam)
+ {
+ AliError("No AliTRDRecParam instance available\n");
+ return;
+ }
- return timebin / samplingFrequency * vdrift;
+ Double_t *inADC = new Double_t[nTimeTotal]; // ADC data before tail cancellation
+ Double_t *outADC = new Double_t[nTimeTotal]; // ADC data after tail cancellation
+ indexesIn->ResetCounters();
+ while (indexesIn->NextRCIndex(iRow, iCol))
+ {
+ Float_t calGainFactorROCValue = calGainFactorROC->GetValue(iCol,iRow);
+ Double_t gain = calGainFactorDetValue
+ * calGainFactorROCValue;
+
+ for (iTime = 0; iTime < nTimeTotal; iTime++)
+ {
+ // Apply gain gain factor
+ inADC[iTime] = digitsIn->GetDataUnchecked(iRow,iCol,iTime);
+ inADC[iTime] /= gain;
+ outADC[iTime] = inADC[iTime];
+ }
+
+ // Apply the tail cancelation via the digital filter
+ if (recParam->TCOn())
+ {
+ DeConvExp(inADC,outADC,nTimeTotal,recParam->GetTCnexp());
+ }
+
+ indexesIn->ResetTbinCounter();
+ while (indexesIn->NextTbinIndex(iTime))
+ {
+ // Store the amplitude of the digit if above threshold
+ if (outADC[iTime] > ADCthreshold)
+ {
+ digitsOut->SetDataUnchecked(iRow,iCol,iTime,outADC[iTime]);
+ indexesOut->AddIndexTBin(iRow,iCol,iTime);
+ }
+ } // while itime
+
+ } // while irow icol
+
+ delete [] inADC;
+ delete [] outADC;
+
+ return;
+
+}
+
+//_____________________________________________________________________________
+void AliTRDclusterizer::DeConvExp(Double_t *source, Double_t *target
+ , Int_t n, Int_t nexp)
+{
+ //
+ // Tail cancellation by deconvolution for PASA v4 TRF
+ //
+
+ Double_t rates[2];
+ Double_t coefficients[2];
+
+ // Initialization (coefficient = alpha, rates = lambda)
+ Double_t r1 = 1.0;
+ Double_t r2 = 1.0;
+ Double_t c1 = 0.5;
+ Double_t c2 = 0.5;
+
+ if (nexp == 1) { // 1 Exponentials
+ r1 = 1.156;
+ r2 = 0.130;
+ c1 = 0.066;
+ c2 = 0.000;
+ }
+ if (nexp == 2) { // 2 Exponentials
+ r1 = 1.156;
+ r2 = 0.130;
+ c1 = 0.114;
+ c2 = 0.624;
+ }
+
+ coefficients[0] = c1;
+ coefficients[1] = c2;
+
+ Double_t dt = 0.1;
+
+ rates[0] = TMath::Exp(-dt/(r1));
+ rates[1] = TMath::Exp(-dt/(r2));
+
+ Int_t i = 0;
+ Int_t k = 0;
+
+ Double_t reminder[2];
+ Double_t correction = 0.0;
+ Double_t result = 0.0;
+
+ // Attention: computation order is important
+ for (k = 0; k < nexp; k++) {
+ reminder[k] = 0.0;
+ }
+
+ for (i = 0; i < n; i++) {
+
+ result = (source[i] - correction); // No rescaling
+ target[i] = result;
+
+ for (k = 0; k < nexp; k++) {
+ reminder[k] = rates[k] * (reminder[k] + coefficients[k] * result);
+ }
+
+ correction = 0.0;
+ for (k = 0; k < nexp; k++) {
+ correction += reminder[k];
+ }
+
+ }
}
git://git.uio.no / u / mrichter / AliRoot.git / commitdiff