Test macro for the paramtrized reconstruction

diff --git a/TPC/AliBarrelRec_TPCparam.C b/TPC/AliBarrelRec_TPCparam.C
new file mode 100644 (file)
index 0000000..299e026
--- /dev/null
+++ b/TPC/AliBarrelRec_TPCparam.C
@@ -0,0 +1,427 @@
+/****************************************************************************
+ * This macro is supposed to do reconstruction in the ITS via Kalman        *
+ * tracker V2. The ITStracker is feeded with parametrized TPC tracks        * 
+ *                                                                          *
+ * It does the following steps:                                             *
+ *             1) TPC tracking parameterization                             *
+ *             2) ITS cluster finding V2 (via fast points !)                *
+ *             3) ITS track finding V2                                      *
+ *             4) Create a reference file with simulation info (p,PDG...)   *
+ *                                                                          *
+ * (Origin: A.Dainese, Padova, andrea.dainese@pd,infn.it                    * 
+ *  from AliBarrelReconstruction.C I.Belikov, CERN, Jouri.Belikov@cern.ch)  *
+ ****************************************************************************/
+
+#ifndef __CINT__
+  #include "alles.h"
+  #include "AliMagF.h"
+  #include "AliITS.h"
+  #include "AliITSgeom.h"
+  #include "AliITSRecPoint.h"
+  #include "AliITSclusterV2.h"
+  #include "AliITSsimulationFastPoints.h"
+  #include "AliITStrackerV2.h"
+  #include "AliTPCtrackerParam.h"
+#endif
+
+typedef struct {
+  Int_t lab;
+  Int_t pdg;
+  Int_t mumpdg;
+  Float_t Vx,Vy,Vz;
+  Float_t Px,Py,Pz;
+} RECTRACK;
+
+
+Int_t TPCParamTracks(const Char_t *galice,const Char_t *outname,const Int_t coll,const Double_t Bfield,Int_t n);
+Int_t ITSFindClusters(const Char_t *inname,const Char_t *outname,Int_t n);
+Int_t ITSFindTracks(const Char_t *galice,const Char_t *inname,const Char_t *inname2,const Char_t *outname,Int_t n);
+Int_t ITSMakeRefFile(const Char_t *galice, const Char_t *inname, const Char_t *outname, Int_t n);
+
+Int_t AliBarrelRec_TPCparam(Int_t n=1) {
+  const Char_t *TPCtrkNameS="AliTPCtracksParam.root";
+  const Char_t *galiceName="galice.root";
+  const Char_t *ITSclsName="AliITSclustersV2.root";
+  const Char_t *ITStrkName="AliITStracksV2.root";
+  const Char_t *ITSrefName="ITStracksRefFile.root";
+
+  // set here the code for the type of collision (needed for TPC tracking
+  // parameterization). available collisions:
+  //
+  // coll = 0 ->   PbPb6000 (HIJING with b<2fm) 
+  const Int_t    collcode = 0;  
+  // set here the value of the magnetic field
+  const Double_t BfieldValue = 0.4;
+
+
+
+  AliKalmanTrack::SetConvConst(100/0.299792458/BfieldValue);
+
+  
+  // ********** Build TPC tracks with parameterization *********** //
+  if (TPCParamTracks(galiceName,TPCtrkNameS,collcode,BfieldValue,n)) {
+    cerr<<"Failed to get TPC hits !\n";
+    return 1;
+  }
+
+  
+  // ********** Find ITS clusters *********** //
+  if (ITSFindClusters(galiceName,ITSclsName,n)) {
+    cerr<<"Failed to get ITS clusters !\n";
+    return 1;
+  } 
+  
+
+  // ********* Find ITS tracks *********** //
+  if (ITSFindTracks(galiceName,TPCtrkNameS,ITSclsName,ITStrkName,n)) {
+    cerr<<"Failed to get ITS tracks !\n";
+    return 1;
+  } 
+  
+  
+  // ********* Make ITS tracks reference file *********** //
+  if (ITSMakeRefFile(galiceName,ITStrkName,ITSrefName,n)) {
+    cerr<<"Failed to get ITS tracks ref file!\n";
+    return 1;
+  } 
+  
+
+  return 0;
+}
+
+
+Int_t TPCParamTracks(const Char_t *galice, const Char_t *outname,
+                    const Int_t coll,const Double_t Bfield,Int_t n) {
+
+  cerr<<"\n*******************************************************************\n";
+  Int_t rc;
+
+  const Char_t *name="TPCParamTracks";
+  cerr<<'\n'<<name<<"...\n";
+  gBenchmark->Start(name);
+
+  TFile *outfile=TFile::Open(outname,"recreate");
+  TFile *infile =TFile::Open(galice);
+
+  AliTPCtrackerParam tracker(coll,Bfield);
+  rc = tracker.BuildTPCtracks(infile,outfile,n);
+
+  delete gAlice; gAlice=0;
+
+  infile->Close();
+  outfile->Close();
+
+  gBenchmark->Stop(name);
+  gBenchmark->Show(name);
+
+  return rc;
+}
+
+Int_t ITSFindClusters(const Char_t *inname, const Char_t *outname, Int_t n) {
+
+ 
+  cerr<<"\n*******************************************************************\n";
+
+  Int_t rc=0;
+  const Char_t *name="ITSFindClusters";
+  cerr<<'\n'<<name<<"...\n";
+  gBenchmark->Start(name);
+  TFile *out=TFile::Open(outname,"recreate");
+  TFile *in =TFile::Open(inname,"update");
+
+  
+  if (!(gAlice=(AliRun*)in->Get("gAlice"))) {
+    cerr<<"Can't get gAlice !\n";
+    return 1;
+  }
+  
+  
+  AliITS *ITS  = (AliITS*)gAlice->GetModule("ITS");
+  if (!ITS) { cerr<<"Can't get the ITS !\n"; return 1;}
+  AliITSgeom *geom=ITS->GetITSgeom();
+  out->cd();   
+  geom->Write();
+  
+  Int_t ev=0;
+  for (ev = 0; ev<n; ev++){
+    in->cd();   // !!!! MI directory must point to galice. - othervise problem with Tree -connection
+    gAlice->GetEvent(ev);
+    //gAlice->TreeR()->Reset();   //reset reconstructed tree
+    
+     
+    TTree *pTree=gAlice->TreeR();
+    if (!pTree){
+      gAlice->MakeTree("R");
+      pTree = gAlice->TreeR();
+    }
+    TBranch *branch=pTree->GetBranch("ITSRecPoints");
+    if (!branch) {
+      //if not reconstructed ITS branch do reconstruction 
+      ITS->MakeBranch("R",0);
+      //////////////// Taken from ITSHitsToFastPoints.C ///////////////////////
+      for (Int_t i=0;i<3;i++) { 
+       ITS->SetSimulationModel(i,new AliITSsimulationFastPoints()); 
+      }
+      Int_t nsignal=25;
+      Int_t size=-1;
+      Int_t bgr_ev=Int_t(ev/nsignal);
+      ITS->HitsToFastRecPoints(ev,bgr_ev,size," ","All"," ");
+      ///////////////////////////////////////////////////////////////////////
+      gAlice->GetEvent(ev);   //MI comment  - in HitsToFast... they reset treeR to 0 
+      //they overwrite full reconstructed event ???? ... so lets connect TreeR one more
+      //time
+    }
+
+
+     
+    out->cd();
+    TClonesArray *clusters=new TClonesArray("AliITSclusterV2",10000);
+    char   cname[100];
+    sprintf(cname,"TreeC_ITS_%d",ev);
+    
+    TTree *cTree=new TTree(cname,"ITS clusters");
+    cTree->Branch("Clusters",&clusters);
+     
+    pTree=gAlice->TreeR();
+    if (!pTree) { cerr<<"Can't get TreeR !\n"; return 1; }
+    branch=pTree->GetBranch("ITSRecPoints");
+    if (!branch) { cerr<<"Can't get ITSRecPoints branch !\n"; return 1;}
+    TClonesArray *points=new TClonesArray("AliITSRecPoint",10000);
+    branch->SetAddress(&points);
+     
+    TClonesArray &cl=*clusters;
+    Int_t nclusters=0;
+    Int_t nentr=(Int_t)pTree->GetEntries();
+    AliITSgeom *geom=ITS->GetITSgeom();
+
+    for (Int_t i=0; i<nentr; i++) {
+      if (!pTree->GetEvent(i)) {cTree->Fill(); continue;}
+      Int_t lay,lad,det; geom->GetModuleId(i,lay,lad,det);
+      Float_t x,y,zshift; geom->GetTrans(lay,lad,det,x,y,zshift); 
+      Double_t rot[9];    geom->GetRotMatrix(lay,lad,det,rot);
+      Double_t yshift = x*rot[0] + y*rot[1];
+      Int_t ndet=(lad-1)*geom->GetNdetectors(lay) + (det-1);
+      Int_t ncl=points->GetEntriesFast();
+      nclusters+=ncl;
+      Float_t lp[5];
+      Int_t lab[6]; 
+      for (Int_t j=0; j<ncl; j++) {
+       AliITSRecPoint *p=(AliITSRecPoint*)points->UncheckedAt(j);
+       lp[0]=-p->GetX()-yshift; if (lay==1) lp[0]=-lp[0];
+       lp[1]=p->GetZ()+zshift;
+       lp[2]=p->GetSigmaX2();
+       lp[3]=p->GetSigmaZ2();
+       lp[4]=p->GetQ();
+       lab[0]=p->GetLabel(0);lab[1]=p->GetLabel(1);lab[2]=p->GetLabel(2);
+       lab[3]=ndet;
+       
+       Int_t label=lab[0];
+       TParticle *part=(TParticle*)gAlice->Particle(label);
+       label=-3;
+       while (part->P() < 0.005) {
+         Int_t m=part->GetFirstMother();
+         if (m<0) {cerr<<"Primary momentum: "<<part->P()<<endl; break;}
+         label=m;
+         part=(TParticle*)gAlice->Particle(label);
+       }
+       if      (lab[1]<0) lab[1]=label;
+       else if (lab[2]<0) lab[2]=label;
+       else cerr<<"No empty labels !\n";
+       
+       new(cl[j]) AliITSclusterV2(lab,lp);
+      }
+      cTree->Fill(); clusters->Delete();
+      points->Delete();
+    }
+    cTree->Write();
+    cerr<<"Number of clusters: "<<nclusters<<endl;
+    delete cTree; delete clusters; delete points;
+    
+  }
+
+  
+  delete gAlice; gAlice=0;
+  in->Close();
+  out->Close();
+  gBenchmark->Stop(name);
+  gBenchmark->Show(name);
+
+  return rc;
+}
+
+Int_t ITSFindTracks(const Char_t *galice, const Char_t * inname, 
+                    const Char_t *inname2, const Char_t *outname, 
+                    Int_t n) {
+
+ 
+  cerr<<"\n*******************************************************************\n";
+
+  Int_t rc=0;
+  const Char_t *name="ITSFindTracks";
+  cerr<<'\n'<<name<<"...\n";
+  gBenchmark->Start(name);
+  
+  
+  TFile *out=TFile::Open(outname,"recreate");
+  TFile *in =TFile::Open(inname);
+  TFile *in2 =TFile::Open(inname2);
+  
+  AliITSgeom *geom=(AliITSgeom*)gFile->Get("AliITSgeom");
+  if (!geom) { cerr<<"can't get ITS geometry !\n"; return 1;}
+
+  
+  for (Int_t ev=0; ev<n; ev++){
+    AliITStrackerV2 tracker(geom,ev);
+    
+    TArrayF o;
+    o.Set(3);
+    TFile* vtxFile = new TFile(galice);
+    vtxFile->cd();
+    AliHeader* header = 0;
+    TTree* treeE = (TTree*)gDirectory->Get("TE");
+    treeE->SetBranchAddress("Header",&header);
+    treeE->GetEntry(ev);
+    AliGenEventHeader* genHeader = header->GenEventHeader();
+    if(genHeader) {
+      // get primary vertex position
+      genHeader->PrimaryVertex(o);
+      vtxFile->Close();
+      delete header;
+    // set position of primary vertex
+      Double_t vtx[3];
+      vtx[0]=o[0]; vtx[1]=o[1]; vtx[2]=o[2];
+      cerr<<"+++\n+++ Reading primary vertex position from galice.root\n+++\n+++ Setting primary vertex z = "<<vtx[2]<<" cm for ITS tracking\n+++\n";
+      tracker.SetVertex(vtx);  
+    }else {
+      cerr<<"+++\n+++ Event header not found in galice.root:\n+++ Primary vertex in (0,0,0) [default]\n+++\n";
+    }    
+
+    // setup vertex constraint in the two tracking passes
+    Int_t flags[2];
+    flags[0]=0;
+    tracker.SetupFirstPass(flags);
+    flags[0]=-1;
+    tracker.SetupSecondPass(flags);
+    
+    rc=tracker.Clusters2Tracks(in,out);
+ 
+  }
+
+  delete gAlice;  gAlice=0;
+  in->Close();
+  in2->Close();
+  out->Close();
+
+  gBenchmark->Stop(name);
+  gBenchmark->Show(name);
+  
+  return rc;
+}
+
+
+Int_t ITSMakeRefFile(const Char_t *galice, const Char_t *inname, 
+                    const Char_t *outname, Int_t n) {
+
+ 
+  cerr<<"\n*******************************************************************\n";
+
+  Int_t rc=0;
+  const Char_t *name="ITSMakeRefFile";
+  cerr<<'\n'<<name<<"...\n";
+  gBenchmark->Start(name);
+  
+  
+  TFile *out = TFile::Open(outname,"recreate");
+  TFile *trk = TFile::Open(inname);
+  TFile *kin = TFile::Open(galice);
+
+  
+  // Get gAlice object from file
+  if(!(gAlice=(AliRun*)kin->Get("gAlice"))) {
+    cerr<<"gAlice has not been found on galice.root !\n";
+    return 1;
+  }
+  
+
+ 
+  Int_t label;
+  TParticle *Part;  
+  TParticle *Mum;
+  static RECTRACK rectrk;
+  
+
+  for(Int_t event=0; event<n; event++){
+
+    AliITStrackV2 *itstrack=0;
+
+    Int_t nparticles=gAlice->GetEvent(event);  
+
+    trk->cd();
+
+    // Tree with ITS tracks
+    char tname[100];
+    sprintf(tname,"TreeT_ITS_%d",event);
+
+    TTree *tracktree=(TTree*)trk->Get(tname);
+    TBranch *tbranch=tracktree->GetBranch("tracks");
+    Int_t nentr=(Int_t)tracktree->GetEntries();
+
+    // Tree for true track parameters
+    char ttname[100];
+    sprintf(ttname,"Tree_Ref_%d",event);
+    TTree *reftree = new TTree(ttname,"Tree with true track params");
+    reftree->Branch("rectracks",&rectrk,"lab/I:pdg:Vx/F:Vy:Vz:Px:Py:Pz");
+
+    for (Int_t i=0; i<nentr; i++) {
+      itstrack=new AliITStrackV2;
+      tbranch->SetAddress(&itstrack);
+      tracktree->GetEvent(i);
+      label = TMath::Abs(itstrack->GetLabel());
+
+      Part = (TParticle*)gAlice->Particle(label);
+      rectrk.lab=label;
+      rectrk.pdg=Part->GetPdgCode();
+      if(Part->GetFirstMother()>=0) {
+       Mum = (TParticle*)gAlice->Particle(Part->GetFirstMother());
+       rectrk.mumpdg=Mum->GetPdgCode();
+      } else {
+       rectrk.mumpdg=-1;
+      }
+      rectrk.Vx=Part->Vx();
+      rectrk.Vy=Part->Vy();
+      rectrk.Vz=Part->Vz();
+      rectrk.Px=Part->Px();
+      rectrk.Py=Part->Py();
+      rectrk.Pz=Part->Pz();
+      
+      reftree->Fill();
+    }   
+
+    out->cd();
+    reftree->Write();
+
+  }
+
+  trk->Close();
+  kin->Close();
+  out->Close();
+
+  gBenchmark->Stop(name);
+  gBenchmark->Show(name);
+  
+
+  return rc;
+
+}
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