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b86ddfbb | 1 | /************************************************************************** |
2 | * Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. * | |
3 | * * | |
4 | * Author: The ALICE Off-line Project. * | |
5 | * Contributors are mentioned in the code where appropriate. * | |
6 | * * | |
7 | * Permission to use, copy, modify and distribute this software and its * | |
8 | * documentation strictly for non-commercial purposes is hereby granted * | |
9 | * without fee, provided that the above copyright notice appears in all * | |
10 | * copies and that both the copyright notice and this permission notice * | |
11 | * appear in the supporting documentation. The authors make no claims * | |
12 | * about the suitability of this software for any purpose. It is * | |
13 | * provided "as is" without express or implied warranty. * | |
14 | **************************************************************************/ | |
15 | //_________________________________________________________________________ | |
16 | // Various utilities usefull for analysis | |
17 | // | |
18 | //*-- Yves Schutz | |
19 | ////////////////////////////////////////////////////////////////////////////// | |
20 | ||
21 | #include "AliAnalysisDataContainer.h" | |
22 | #include "AliTagAnalysis.h" | |
23 | #include "AliEventTagCuts.h" | |
24 | #include "AliRunTagCuts.h" | |
25 | #include "AliXMLCollection.h" | |
26 | #include "AliAnalysisGoodies.h" | |
27 | #include "AliAnalysisManager.h" | |
59d12c2b | 28 | #include "AliAODHandler.h" |
b86ddfbb | 29 | #include "AliAnalysisTask.h" |
b86ddfbb | 30 | #include "AliLog.h" |
31 | ||
32 | #include <Riostream.h> | |
9c0977a1 | 33 | #ifdef WITHALIEN |
31829163 | 34 | #include <TGridResult.h> |
d08133e6 | 35 | #include <TFileMerger.h> |
9c0977a1 | 36 | #endif |
b86ddfbb | 37 | #include <TChain.h> |
b86ddfbb | 38 | #include <TGrid.h> |
39 | #include <TROOT.h> | |
40 | #include <TSystem.h> | |
d775a1d2 | 41 | #include <TEntryList.h> |
b86ddfbb | 42 | |
43 | //______________________________________________________________________________ | |
44 | AliAnalysisGoodies::AliAnalysisGoodies() : | |
91605856 | 45 | TObject(), |
46 | fTimer(), | |
b86ddfbb | 47 | fESDTreeName("esdTree"), |
59d12c2b | 48 | fAmgr(0) |
b86ddfbb | 49 | { |
50 | fTimer.Reset() ; | |
51 | ||
52 | TString token = gSystem->Getenv("GRID_TOKEN") ; | |
53 | ||
54 | if ( token == "OK" ) | |
55 | TGrid::Connect("alien://"); | |
56 | else | |
57 | AliInfo("You are not connected to the GRID") ; | |
59d12c2b | 58 | // Make the analysis manager |
59 | fAmgr = new AliAnalysisManager("Goodies Manager", "Analysis manager created by AliAnalysisGoodies") ; | |
b86ddfbb | 60 | } |
61 | ||
91605856 | 62 | //______________________________________________________________________________ |
63 | AliAnalysisGoodies::AliAnalysisGoodies(const AliAnalysisGoodies& ag) : | |
64 | TObject(), | |
65 | fTimer(), | |
59d12c2b | 66 | fESDTreeName("") |
91605856 | 67 | { |
68 | ||
69 | fESDTreeName = ag.fESDTreeName ; | |
70 | TString token = gSystem->Getenv("GRID_TOKEN") ; | |
71 | ||
72 | if ( token == "OK" ) | |
73 | TGrid::Connect("alien://"); | |
74 | else | |
75 | AliInfo("You are not connected to the GRID") ; | |
59d12c2b | 76 | |
77 | // Make the analysis manager | |
78 | fAmgr = new AliAnalysisManager("Goodies Manager", "Analysis manager created by AliAnalysisGoodies") ; | |
91605856 | 79 | } |
80 | ||
b86ddfbb | 81 | //______________________________________________________________________________ |
82 | void AliAnalysisGoodies::Help() const | |
83 | { | |
84 | AliInfo("Analysis utilities:\n") ; | |
003ca69e | 85 | printf(" *** Alien2Local : copy files ESD files listed in an xml collection from AliEn catalog to local storage and creates a local xml collection \n") ; |
86 | printf(" usage: Alien2Local(in, out)\n") ; | |
b86ddfbb | 87 | printf(" in: a xml esd collection file name \n") ; |
88 | printf(" ou: the local directory where to save the esd root files \n") ; | |
89 | printf(" *** Make : makes esd collection from tags \n") ; | |
90 | printf(" usage: Make(tags, esds)\n") ; | |
91 | printf(" tags: is either a tag root file or an xml tag collection \n") ; | |
92 | printf(" esds: is an esd collection \n") ; | |
93 | printf(" *** Merge : merges files listed in a xml collection \n") ; | |
94 | printf(" usage Merge(collection, outputDile)\n") ; | |
95 | printf(" collection: is a xml collection \n") ; | |
96 | printf(" *** Process : process the events with an Analysis Task \n") ; | |
97 | printf(" usage: Process(esdFile, tagCuts) \n") ; | |
98 | printf(" esdFile: can be a root file with the ESD Tree ( ex: esd?AliESDs.root) \n") ; | |
99 | printf(" or a root file with the Tag Tree ( ex: tag?Run100.Event0_100.ESD.tag.root) \n") ; | |
100 | printf(" or a local or alien xml file with the ESD collection ( ex: esd?esdCollection.xml) \n") ; | |
101 | printf(" or a local or alien xml file with the TAG collection ( ex: tag?tagCollection.xml) \n") ; | |
102 | printf(" or a TChain of esd TTrees \n") ; | |
103 | printf(" tagCuts: is the AliEventTagCuts (needed only for tag? cases \n") ; | |
104 | printf(" *** Register: register files already stored in a MSS into the AliEn catalog\n") ; | |
105 | printf(" usage: Register(lfndir, pfndir, pfnFileName) \n") ; | |
106 | printf(" lfndir : AliEn directory ( ex: /alice/data/2006/LHC06c/PHOS_TestBeam/\n") ; | |
107 | printf(" pfndir : MSS directory ( ex: /castor/cern.ch/alice/testbeam/phos/2006 \n") ; | |
108 | printf(" file : text file with a list of the file names to be registered\n ") ; | |
109 | ||
110 | } | |
111 | ||
112 | //______________________________________________________________________ | |
c49bca36 | 113 | Bool_t AliAnalysisGoodies::Alien2Local(const TString collectionNameIn, const TString localDir) |
b86ddfbb | 114 | { |
115 | // copy files ESD files listed in an xml collection from AliEn catalog to local storage and creates a local xml collection | |
116 | // usage: Alien2Local(in, out) | |
117 | // in: a xml esd collection file name | |
118 | // ou: the local directory where to save the esd root files | |
119 | ||
d08133e6 | 120 | #ifdef WITHALIEN |
b86ddfbb | 121 | Bool_t rv = kTRUE ; |
122 | ||
123 | fTimer.Start() ; | |
124 | ||
125 | AliXMLCollection * collectionIn = AliXMLCollection::Open(collectionNameIn) ; | |
126 | collectionIn->Reset() ; | |
127 | ||
128 | AliXMLCollection * collectionOu = new AliXMLCollection() ; | |
129 | TString collectionNameOu(collectionIn->GetCollectionName()) ; | |
130 | collectionNameOu.Append("Local") ; | |
131 | collectionOu->SetCollectionName(collectionNameOu) ; | |
132 | collectionOu->WriteHeader() ; | |
133 | ||
134 | TFileMerger merger ; | |
135 | ||
136 | const char* ocwd = gSystem->WorkingDirectory(); | |
137 | ||
c16bb9ed | 138 | Int_t counter = 1 ; |
b86ddfbb | 139 | while ( collectionIn->Next() ) { |
140 | gSystem->ChangeDirectory(localDir) ; | |
141 | TString fileTURL = collectionIn->GetTURL("") ; | |
142 | ||
143 | TString tempo(fileTURL) ; | |
144 | tempo.Remove(tempo.Last('/'), tempo.Length()) ; | |
145 | TString evtsNumber = tempo(tempo.Last('/')+1, tempo.Length())+"/"; | |
146 | tempo.Remove(tempo.Last('/'), tempo.Length()) ; | |
147 | TString runNumber = tempo(tempo.Last('/')+1, tempo.Length())+"/" ; | |
148 | TString dir = localDir + runNumber ; | |
d775a1d2 | 149 | dir += evtsNumber ; |
150 | char line[1024] ; | |
151 | sprintf(line, ".! mkdir -p %s", dir.Data()) ; | |
152 | gROOT->ProcessLine(line) ; | |
153 | printf("***************************%s\n", line) ; | |
b86ddfbb | 154 | TEntryList * list = collectionIn->GetEventList("") ; |
d775a1d2 | 155 | if (!list) |
156 | list = new TEntryList() ; | |
d775a1d2 | 157 | tempo = fileTURL ; |
158 | TString filename = tempo(tempo.Last('/')+1, tempo.Length()) ; | |
159 | dir += filename ; | |
160 | AliInfo(Form("Copying %s to %s\n", fileTURL.Data(), dir.Data())) ; | |
c16bb9ed | 161 | collectionOu->WriteBody(counter, collectionIn->GetGUID(""), collectionIn->GetLFN(""), dir, list) ; |
162 | counter++ ; | |
b86ddfbb | 163 | merger.Cp(fileTURL, dir) ; |
164 | } | |
165 | collectionOu->Export() ; | |
166 | gSystem->ChangeDirectory(ocwd) ; | |
167 | ||
168 | fTimer.Stop(); | |
169 | fTimer.Print(); | |
170 | ||
d08133e6 | 171 | return rv ; |
172 | #else | |
173 | return kFALSE; | |
174 | #endif | |
b86ddfbb | 175 | } |
176 | ||
59d12c2b | 177 | //______________________________________________________________________ |
178 | AliAnalysisDataContainer * AliAnalysisGoodies::ConnectInput(AliAnalysisTask * task, TClass * classin, UShort_t index) | |
179 | { | |
180 | // connect a task to the input | |
181 | ||
182 | if ( ! fAmgr->GetTask(task->GetName()) ) | |
183 | fAmgr->AddTask(task) ; | |
184 | else | |
185 | AliFatal(Form("Task %s already exists", task->GetName())) ; | |
186 | ||
187 | AliAnalysisDataContainer * taskInput = 0x0 ; | |
188 | if ( fAmgr->GetInputs() ) | |
189 | taskInput = dynamic_cast<AliAnalysisDataContainer *>(fAmgr->GetInputs()->FindObject(Form("InputContainer_%s_%d", task->GetName(), index))) ; | |
190 | if ( ! taskInput ) { | |
191 | taskInput = fAmgr->CreateContainer(Form("InputContainer_%s_%d", task->GetName(), index), classin, AliAnalysisManager::kInputContainer) ; | |
192 | fAmgr->ConnectInput (task, index, taskInput); | |
193 | } | |
194 | else | |
195 | AliFatal(Form("Input %s already exists", taskInput->GetName())) ; | |
196 | ||
197 | return taskInput ; | |
198 | } | |
199 | ||
200 | //______________________________________________________________________ | |
201 | void AliAnalysisGoodies::ConnectInput(AliAnalysisTask * task, AliAnalysisDataContainer * taskInput, UShort_t index) | |
202 | { | |
203 | // connect a task to the input | |
204 | ||
205 | if ( ! fAmgr->GetTask(task->GetName()) ) | |
206 | fAmgr->AddTask(task) ; | |
207 | else | |
208 | AliFatal(Form("Task %s already exists", task->GetName())) ; | |
209 | ||
210 | fAmgr->ConnectInput (task, index, taskInput); | |
211 | } | |
212 | ||
213 | //______________________________________________________________________ | |
214 | AliAnalysisDataContainer * AliAnalysisGoodies::ConnectOuput(AliAnalysisTask * task, TClass * classou, UShort_t index, TString opt ) | |
215 | { | |
216 | // connect a task to the output | |
217 | ||
218 | char filename[20] ; | |
219 | ||
220 | if (opt == "AOD" ) { | |
221 | if ( fAmgr->GetEventHandler() == 0x0) { | |
222 | AliAODHandler * aodHandler = new AliAODHandler() ; | |
223 | aodHandler->SetOutputFileName(Form("%s_0.root",task->GetName())) ; | |
224 | fAmgr->SetEventHandler(aodHandler) ; | |
225 | } | |
226 | sprintf(filename, "default") ; | |
227 | } | |
228 | else { | |
229 | if ( fAmgr->GetEventHandler() == 0x0) { | |
230 | AliAODHandler * aodHandler = new AliAODHandler() ; | |
231 | fAmgr->SetEventHandler(aodHandler) ; | |
232 | } | |
233 | sprintf(filename, "%s_%d.root",task->GetName(), index) ; | |
234 | } | |
235 | ||
236 | AliAnalysisDataContainer * taskOuput = 0x0 ; | |
237 | if ( fAmgr->GetOutputs() ) | |
238 | taskOuput = dynamic_cast<AliAnalysisDataContainer *>(fAmgr->GetOutputs()->FindObject(Form("OutputContainer_%s_%d", task->GetName(), index))) ; | |
239 | if ( ! taskOuput ) | |
240 | taskOuput = fAmgr->CreateContainer(Form("OutputContainer_%s_%d", task->GetName(), index), classou, AliAnalysisManager::kOutputContainer, filename) ; | |
241 | fAmgr->ConnectOutput(task, index, taskOuput); | |
242 | ||
243 | return taskOuput ; | |
244 | } | |
245 | ||
246 | //______________________________________________________________________ | |
247 | void AliAnalysisGoodies::ConnectOuput(AliAnalysisTask * task, AliAnalysisDataContainer * taskOuput, UShort_t index) | |
248 | { | |
249 | // connect a task to the output | |
250 | ||
251 | fAmgr->ConnectInput (task, index, taskOuput); | |
252 | } | |
253 | ||
b86ddfbb | 254 | //______________________________________________________________________ |
91605856 | 255 | Bool_t AliAnalysisGoodies::Make(AliRunTagCuts *runCuts, AliLHCTagCuts *lhcCuts, AliDetectorTagCuts *detCuts, AliEventTagCuts *evtCuts, const char * in, const char * out) const |
b86ddfbb | 256 | { |
257 | // makes esd collection from tags | |
258 | // usage Make(tags, esds) | |
259 | // tags: is either a tag root file or an xml tag collection | |
260 | // esds: is an esd collection | |
261 | ||
262 | Bool_t rv = kTRUE ; | |
263 | ||
264 | if ( !evtCuts && !runCuts ) { | |
265 | AliError("No Tag cuts provided") ; | |
266 | return kFALSE ; | |
267 | } | |
268 | ||
269 | TString file(in) ; | |
270 | if ( file.Contains(".root") ) | |
91605856 | 271 | rv = MakeEsdCollectionFromTagFile(runCuts, lhcCuts, detCuts, evtCuts, file.Data(), out) ; |
b86ddfbb | 272 | else if ( file.Contains(".xml") ) |
91605856 | 273 | rv = MakeEsdCollectionFromTagCollection(runCuts, lhcCuts, detCuts, evtCuts, file.Data(), out) ; |
b86ddfbb | 274 | else { |
275 | AliError(Form("%s is not a valid file format", in)) ; | |
276 | rv = kFALSE ; | |
277 | } | |
278 | ||
279 | return rv ; | |
280 | } | |
281 | ||
282 | //______________________________________________________________________ | |
91605856 | 283 | Bool_t AliAnalysisGoodies::MakeEsdCollectionFromTagFile(AliRunTagCuts *runCuts, AliLHCTagCuts *lhcCuts, AliDetectorTagCuts *detCuts, AliEventTagCuts *evtCuts, const char * in, const char * out) const |
b86ddfbb | 284 | { |
285 | // Makes an esd collection from a root tag file | |
286 | Bool_t rv = kTRUE ; | |
287 | // Open the file collection | |
288 | printf("*** Create Collection ***\n"); | |
289 | printf("*** Wk-Dir = |%s| \n",gSystem->WorkingDirectory()); | |
290 | printf("*** file = |%s| \n",in); | |
291 | ||
292 | AliTagAnalysis * tagAna = new AliTagAnalysis(); | |
293 | rv = tagAna->AddTagsFile(in); | |
294 | if ( ! rv ) | |
295 | return rv ; | |
296 | ||
91605856 | 297 | tagAna->CreateXMLCollection(out, runCuts, lhcCuts, detCuts, evtCuts) ; |
b86ddfbb | 298 | |
299 | return rv ; | |
300 | ||
301 | } | |
302 | ||
303 | //______________________________________________________________________ | |
91605856 | 304 | Bool_t AliAnalysisGoodies::MakeEsdCollectionFromTagCollection(AliRunTagCuts *runCuts, AliLHCTagCuts *lhcCuts, AliDetectorTagCuts *detCuts, AliEventTagCuts *evtCuts, const char * in, const char * out) const |
b86ddfbb | 305 | { |
306 | // Makes an esd collection from a xml tag collection | |
307 | Bool_t rv = kTRUE ; | |
308 | // Open the file collection | |
309 | printf("*** Create Collection ***\n"); | |
310 | printf("*** Wk-Dir = |%s| \n",gSystem->WorkingDirectory()); | |
311 | printf("*** Coll = |%s| \n",in); | |
9c0977a1 | 312 | |
313 | #ifdef WITHALIEN | |
b86ddfbb | 314 | |
e9678f9b | 315 | TGridCollection * collection = (TGridCollection*)gROOT->ProcessLine(Form("TAlienCollection::Open(\"%s\", 0)",in)); |
316 | TGridResult* result = collection->GetGridResult("", 0, 0); | |
b86ddfbb | 317 | AliTagAnalysis * tagAna = new AliTagAnalysis(); |
318 | tagAna->ChainGridTags(result); | |
319 | ||
91605856 | 320 | tagAna->CreateXMLCollection(out, runCuts, lhcCuts, detCuts, evtCuts) ; |
b86ddfbb | 321 | |
9c0977a1 | 322 | #else |
d775a1d2 | 323 | rv = kFALSE; |
9c0977a1 | 324 | #endif |
d775a1d2 | 325 | return rv ; |
b86ddfbb | 326 | } |
327 | ||
328 | //______________________________________________________________________ | |
91605856 | 329 | Bool_t AliAnalysisGoodies::MakeEsdCollectionFromTagCollection(const char * runCuts, const char *lhcCuts, const char *detCuts, const char * evtCuts, const char * in, const char * out) const |
b86ddfbb | 330 | { |
331 | // Makes an esd collection from a xml tag collection | |
332 | ||
333 | Bool_t rv = kTRUE ; | |
334 | ||
335 | // Open the file collection | |
336 | printf("*** Create Collection ***\n"); | |
337 | printf("*** Wk-Dir = |%s| \n",gSystem->WorkingDirectory()); | |
338 | printf("*** Coll = |%s| \n",in); | |
339 | ||
9c0977a1 | 340 | #ifdef WITHALIEN |
341 | ||
e9678f9b | 342 | TGridCollection * collection = (TGridCollection*)gROOT->ProcessLine(Form("TAlienCollection::Open(\"%s\", 0)",in)); |
343 | TGridResult* result = collection->GetGridResult("", 0, 0); | |
b86ddfbb | 344 | AliTagAnalysis * tagAna = new AliTagAnalysis(); |
345 | tagAna->ChainGridTags(result); | |
346 | ||
91605856 | 347 | tagAna->CreateXMLCollection(out, runCuts, lhcCuts, detCuts, evtCuts) ; |
b86ddfbb | 348 | |
9c0977a1 | 349 | #else |
50026a5f | 350 | rv = kFALSE; |
9c0977a1 | 351 | #endif |
50026a5f | 352 | return rv ; |
b86ddfbb | 353 | } |
354 | ||
355 | //______________________________________________________________________ | |
c49bca36 | 356 | Bool_t AliAnalysisGoodies::Merge(const char * collectionFile, const char * subFile, const char * outFile) |
b86ddfbb | 357 | { |
358 | // merges files listed in a xml collection | |
359 | // usage Merge(collection, outputFile)) | |
360 | // collection: is a xml collection | |
361 | ||
362 | Bool_t rv = kFALSE ; | |
363 | ||
364 | if ( strstr(collectionFile, ".xml") == 0 ) { | |
365 | AliError("Input collection file must be an \".xml\" file\n") ; | |
366 | return kFALSE ; | |
367 | } | |
368 | ||
369 | fTimer.Start() ; | |
370 | ||
371 | // Open the file collection | |
372 | printf("*** Create Collection ***\n"); | |
373 | printf("*** Wk-Dir = |%s| \n",gSystem->WorkingDirectory()); | |
374 | printf("*** Coll = |%s| \n",collectionFile); | |
375 | ||
9c0977a1 | 376 | #ifdef WITHALIEN |
377 | ||
e9678f9b | 378 | TGridCollection * collection = (TGridCollection*)gROOT->ProcessLine(Form("TAlienCollection::Open(\"%s\", 0)",collectionFile)); |
379 | TGridResult* result = collection->GetGridResult("", 0, 0); | |
b86ddfbb | 380 | |
381 | Int_t index = 0 ; | |
382 | const char * turl ; | |
383 | TFileMerger merger ; | |
384 | if (!outFile) { | |
385 | TString tempo(collectionFile) ; | |
386 | if ( subFile) | |
387 | tempo.ReplaceAll(".xml", subFile) ; | |
388 | else | |
389 | tempo.ReplaceAll(".xml", "_Merged.root") ; | |
390 | outFile = tempo.Data() ; | |
391 | } | |
392 | merger.OutputFile(outFile) ; | |
393 | ||
394 | while ( (turl = result->GetKey(index, "turl")) ) { | |
395 | char file[2048] ; | |
396 | if ( subFile ) | |
397 | sprintf(file, "%s#%s", turl, subFile) ; | |
398 | else | |
399 | sprintf(file, "%s", turl) ; | |
400 | ||
401 | printf("%s\n", file) ; | |
402 | merger.AddFile(file) ; | |
403 | index++ ; | |
404 | } | |
405 | ||
406 | if (index) | |
407 | merger.Merge() ; | |
408 | ||
409 | AliInfo(Form("Files merged into %s\n", outFile)) ; | |
410 | ||
411 | fTimer.Stop(); | |
412 | fTimer.Print(); | |
413 | ||
9c0977a1 | 414 | #else |
50026a5f | 415 | rv = kFALSE; |
9c0977a1 | 416 | #endif |
50026a5f | 417 | return rv ; |
b86ddfbb | 418 | } |
419 | ||
420 | //______________________________________________________________________ | |
c49bca36 | 421 | Bool_t AliAnalysisGoodies::Process(TChain * chain) |
b86ddfbb | 422 | { |
423 | // process events starting from a chain of esd Trees | |
424 | Bool_t rv = kFALSE ; | |
b86ddfbb | 425 | fTimer.Start() ; |
426 | ||
427 | rv = ProcessChain(chain) ; | |
428 | ||
429 | fTimer.Stop(); | |
430 | fTimer.Print(); | |
431 | ||
432 | return rv ; | |
433 | } | |
434 | ||
435 | //______________________________________________________________________ | |
c49bca36 | 436 | Bool_t AliAnalysisGoodies::Process(const char * inFile) |
b86ddfbb | 437 | { |
438 | // process the events with an Analysis Task | |
439 | // usage Process(esdFile) | |
440 | // esdFile: is of the form opt?file_lfn | |
441 | Bool_t rv = kFALSE ; | |
91605856 | 442 | AliRunTagCuts * runCuts = 0x0 ; |
443 | AliLHCTagCuts * lhcCuts = 0x0 ; | |
444 | AliDetectorTagCuts * detCuts = 0x0 ; | |
445 | AliEventTagCuts * evtCuts = 0x0 ; | |
b86ddfbb | 446 | |
91605856 | 447 | rv = Process(inFile, runCuts, lhcCuts, detCuts, evtCuts) ; |
b86ddfbb | 448 | |
449 | return rv ; | |
450 | } | |
451 | ||
452 | //______________________________________________________________________ | |
91605856 | 453 | Bool_t AliAnalysisGoodies::Process(const char * inFile, AliRunTagCuts *runCuts, AliLHCTagCuts *lhcCuts, AliDetectorTagCuts *detCuts, AliEventTagCuts * evtCuts ) |
b86ddfbb | 454 | { |
455 | // process the events with an Analysis Task | |
456 | // usage Process(esdFile, runtagCuts, evtTagCuts) | |
457 | // esdFile: is of the form opt?file_lfn | |
458 | ||
459 | Bool_t rv = kFALSE ; | |
460 | ||
461 | fTimer.Start() ; | |
462 | ||
463 | TString file(inFile) ; | |
464 | if ( file.Contains("esd?") && file.Contains(".root") ) { | |
465 | file.ReplaceAll("esd?", "") ; | |
466 | rv = ProcessEsdFile(file.Data()) ; | |
467 | ||
468 | } else if ( file.Contains("esd?") && file.Contains(".xml") ) { | |
469 | file.ReplaceAll("esd?", "") ; | |
470 | rv = ProcessEsdXmlCollection(file.Data()) ; | |
471 | ||
472 | } else if (file.Contains("tag?") && file.Contains(".root") ) { | |
473 | file.ReplaceAll("tag?", "") ; | |
91605856 | 474 | rv = ProcessTagFile(file.Data(), runCuts, lhcCuts, detCuts, evtCuts) ; |
b86ddfbb | 475 | |
476 | } else if (file.Contains("tag?") && file.Contains(".xml") ) { | |
477 | file.ReplaceAll("tag?", "") ; | |
91605856 | 478 | rv = ProcessTagXmlCollection(file.Data(), runCuts, lhcCuts, detCuts, evtCuts) ; |
b86ddfbb | 479 | |
480 | } else { | |
481 | AliError(Form("%s is not a valid file format", inFile)) ; | |
482 | rv = kFALSE ; | |
483 | } | |
484 | ||
485 | fTimer.Stop(); | |
486 | fTimer.Print(); | |
487 | ||
488 | return rv ; | |
489 | } | |
490 | ||
491 | //______________________________________________________________________ | |
91605856 | 492 | Bool_t AliAnalysisGoodies::Process(const char * inFile, const char * runCuts, const char * lhcCuts, const char * detCuts, const char * evtCuts) |
b86ddfbb | 493 | { |
494 | // process the events with an Analysis Task | |
495 | // usage Process(esdFile, runtagCuts, evtTagCuts) | |
496 | // esdFile: is of the form opt?file_lfn | |
497 | ||
498 | Bool_t rv = kFALSE ; | |
499 | ||
500 | fTimer.Start() ; | |
501 | ||
502 | TString file(inFile) ; | |
503 | if ( file.Contains("esd?") && file.Contains(".root") ) { | |
504 | file.ReplaceAll("esd?", "") ; | |
505 | rv = ProcessEsdFile(file.Data()) ; | |
506 | ||
507 | } else if ( file.Contains("esd?") && file.Contains(".xml") ) { | |
508 | file.ReplaceAll("esd?", "") ; | |
509 | rv = ProcessEsdXmlCollection(file.Data()) ; | |
510 | ||
511 | } else if (file.Contains("tag?") && file.Contains(".root") ) { | |
512 | file.ReplaceAll("tag?", "") ; | |
91605856 | 513 | rv = ProcessTagFile(file.Data(), runCuts, lhcCuts, detCuts, evtCuts) ; |
b86ddfbb | 514 | |
515 | } else if (file.Contains("tag?") && file.Contains(".xml") ) { | |
516 | file.ReplaceAll("tag?", "") ; | |
91605856 | 517 | rv = ProcessTagXmlCollection(file.Data(), runCuts, lhcCuts, detCuts, evtCuts) ; |
b86ddfbb | 518 | |
519 | } else { | |
520 | AliError(Form("%s is not a valid file format", inFile)) ; | |
521 | rv = kFALSE ; | |
522 | } | |
523 | ||
524 | fTimer.Stop(); | |
525 | fTimer.Print(); | |
526 | ||
527 | return rv ; | |
528 | } | |
529 | ||
530 | //______________________________________________________________________ | |
c49bca36 | 531 | Bool_t AliAnalysisGoodies::ProcessChain(TChain * chain) const |
b86ddfbb | 532 | { |
533 | // Procees a TChain. | |
534 | ||
535 | Bool_t rv = kTRUE ; | |
536 | ||
91605856 | 537 | // start processing |
59d12c2b | 538 | if (fAmgr->InitAnalysis()) { |
539 | fAmgr->PrintStatus(); | |
540 | fAmgr->StartAnalysis("local",chain); | |
b86ddfbb | 541 | } else |
542 | rv = kFALSE ; | |
543 | ||
544 | return rv ; | |
545 | } | |
546 | ||
547 | //______________________________________________________________________ | |
c49bca36 | 548 | Bool_t AliAnalysisGoodies::ProcessEsdFile(const char * esdFile) const |
b86ddfbb | 549 | { |
550 | // process the events in a single ESD file with an Analysis Task | |
551 | // usage ProcessLocalEsdFile(esdFile) | |
552 | // esdFile: is the root file (local or in alien) with the ESD Tree ( ex: AliESDs.root) | |
553 | ||
554 | Bool_t rv = kTRUE ; | |
555 | ||
556 | printf("*** Process ***\n"); | |
557 | printf("*** Wk-Dir = |%s| \n",gSystem->WorkingDirectory()); | |
558 | printf("*** Coll = |%s| \n",esdFile); | |
559 | ||
560 | // Makes the ESD chain | |
561 | printf("*** Getting the Chain ***\n"); | |
562 | TChain* analysisChain = new TChain(fESDTreeName) ; | |
563 | analysisChain->AddFile(esdFile); | |
564 | ||
565 | // Process the events | |
566 | rv = ProcessChain(analysisChain) ; | |
567 | ||
568 | return rv; | |
569 | } | |
570 | ||
571 | //______________________________________________________________________ | |
91605856 | 572 | Bool_t AliAnalysisGoodies::ProcessTagFile(const char * tagFile, AliRunTagCuts *runCuts, AliLHCTagCuts *lhcCuts, AliDetectorTagCuts *detCuts, AliEventTagCuts *evtCuts) const |
b86ddfbb | 573 | { |
574 | // process the events in a single Tag file with an Analysis Task | |
575 | // usage ProcessLocalEsdFile(tagFile) | |
576 | // tagFile: is the root file (local or in alien) with the Tag Tree (ex: Run102.Event0_100.ESD.tag.root) | |
577 | ||
578 | Bool_t rv = kTRUE ; | |
579 | ||
580 | if ( !evtCuts && !runCuts ) { | |
581 | AliError("No Tag cuts provided") ; | |
582 | return kFALSE ; | |
583 | } | |
584 | ||
585 | printf("*** Process ***\n"); | |
586 | printf("*** Wk-Dir = |%s| \n",gSystem->WorkingDirectory()); | |
587 | printf("*** Coll = |%s| \n",tagFile); | |
588 | ||
589 | AliTagAnalysis * tagAna = new AliTagAnalysis(); | |
590 | rv = tagAna->AddTagsFile(tagFile); | |
591 | if ( ! rv ) | |
592 | return rv ; | |
593 | ||
594 | // Query the tag file and make the analysis chain | |
595 | TChain * analysisChain = new TChain(fESDTreeName) ; | |
91605856 | 596 | analysisChain = tagAna->QueryTags(runCuts, lhcCuts, detCuts, evtCuts); |
b86ddfbb | 597 | |
598 | // Process the events | |
599 | rv = ProcessChain(analysisChain) ; | |
600 | ||
601 | return rv; | |
602 | } | |
603 | ||
604 | //______________________________________________________________________ | |
91605856 | 605 | Bool_t AliAnalysisGoodies::ProcessTagFile(const char * tagFile, const char * runCuts, const char * lhcCuts, const char * detCuts, const char * evtCuts) const |
b86ddfbb | 606 | { |
607 | // process the events in a single Tag file with an Analysis Task | |
608 | // usage ProcessLocalEsdFile(tagFile) | |
609 | // tagFile: is the root file (local or in alien) with the Tag Tree (ex: Run102.Event0_100.ESD.tag.root) | |
610 | ||
611 | Bool_t rv = kTRUE ; | |
612 | ||
613 | ||
614 | if ( !evtCuts && !runCuts ) { | |
615 | AliError("No Tag cuts provided") ; | |
616 | return kFALSE ; | |
617 | } | |
618 | ||
619 | printf("*** Process ***\n"); | |
620 | printf("*** Wk-Dir = |%s| \n",gSystem->WorkingDirectory()); | |
621 | printf("*** Coll = |%s| \n",tagFile); | |
622 | ||
623 | AliTagAnalysis * tagAna = new AliTagAnalysis(); | |
624 | rv = tagAna->AddTagsFile(tagFile); | |
625 | if ( ! rv ) | |
626 | return rv ; | |
627 | ||
628 | // Query the tag file and make the analysis chain | |
629 | TChain * analysisChain = new TChain(fESDTreeName) ; | |
91605856 | 630 | analysisChain = tagAna->QueryTags(runCuts, lhcCuts, detCuts, evtCuts); |
b86ddfbb | 631 | |
632 | // Process the events | |
633 | rv = ProcessChain(analysisChain) ; | |
634 | ||
635 | return rv; | |
636 | } | |
637 | ||
638 | //______________________________________________________________________ | |
c49bca36 | 639 | Bool_t AliAnalysisGoodies::ProcessEsdXmlCollection(const char * xmlFile) const |
b86ddfbb | 640 | { |
641 | // process the events in a xml ESD collection with an Analysis Task | |
642 | // usage ProcessLocalEsdFile(xmlFile) | |
643 | // xmlFile: is the local xml file with the ESD collection ( ex: esdCollection.xml) | |
644 | ||
645 | Bool_t rv = kTRUE ; | |
646 | ||
647 | printf("*** Process ***\n"); | |
648 | printf("*** Wk-Dir = |%s| \n",gSystem->WorkingDirectory()); | |
649 | printf("*** Coll = |%s| \n",xmlFile); | |
650 | ||
9c0977a1 | 651 | #ifdef WITHALIEN |
6797e4bc | 652 | //AliXMLCollection * collection = AliXMLCollection::Open(xmlFile,0) ; |
e9678f9b | 653 | TGridCollection * collection = (TGridCollection*)gROOT->ProcessLine(Form("TAlienCollection::Open(\"%s\", 0)", xmlFile)); |
b86ddfbb | 654 | if (! collection) { |
655 | AliError(Form("%s not found", xmlFile)) ; | |
656 | return kFALSE ; | |
657 | } | |
658 | ||
e9678f9b | 659 | TGridResult* result = collection->GetGridResult("",0 ,0); |
b86ddfbb | 660 | TList* analysisfilelist = result->GetFileInfoList(); |
661 | ||
662 | // Makes the ESD chain | |
663 | printf("*** Getting the Chain ***\n"); | |
664 | TChain* analysisChain = new TChain(fESDTreeName); | |
665 | analysisChain->AddFileInfoList(analysisfilelist); | |
6797e4bc | 666 | |
b86ddfbb | 667 | // Process the events |
668 | rv = ProcessChain(analysisChain) ; | |
669 | ||
9c0977a1 | 670 | #else |
50026a5f | 671 | rv = kFALSE; |
6797e4bc | 672 | |
9c0977a1 | 673 | #endif |
6797e4bc | 674 | |
50026a5f | 675 | return rv ; |
b86ddfbb | 676 | } |
677 | ||
678 | //______________________________________________________________________ | |
91605856 | 679 | Bool_t AliAnalysisGoodies::ProcessTagXmlCollection(const char * xmlFile, AliRunTagCuts *runCuts, AliLHCTagCuts *lhcCuts, AliDetectorTagCuts *detCuts, AliEventTagCuts * evtCuts) const |
b86ddfbb | 680 | { |
681 | // process the events in a xml ESD collection with an Analysis Task | |
682 | // usage ProcessLocalEsdFile(xmlFile) | |
683 | // xmlFile: is the local xml file with the tag collection ( ex: tagCollection.xml) | |
684 | ||
685 | Bool_t rv = kTRUE ; | |
686 | ||
687 | if ( !evtCuts && !runCuts ) { | |
688 | AliError("No Tag cuts provided") ; | |
689 | return kFALSE ; | |
690 | } | |
691 | ||
692 | printf("*** Process ***\n"); | |
693 | printf("*** Wk-Dir = |%s| \n",gSystem->WorkingDirectory()); | |
e9678f9b | 694 | printf("*** Coll = |%s| \n",xmlFile); |
b86ddfbb | 695 | |
696 | // check if file is local or alien | |
697 | if ( gSystem->AccessPathName(xmlFile) ) | |
698 | TGrid::Connect("alien://"); | |
699 | ||
9c0977a1 | 700 | #ifdef WITHALIEN |
701 | ||
e9678f9b | 702 | TGridCollection * collection = (TGridCollection*)gROOT->ProcessLine(Form("TAlienCollection::Open(\"%s\", 0)",xmlFile)); |
b86ddfbb | 703 | if (! collection) { |
704 | AliError(Form("%s not found", xmlFile)) ; | |
705 | return kFALSE ; | |
706 | } | |
707 | ||
e9678f9b | 708 | TGridResult* result = collection->GetGridResult("", 0, 0); |
b86ddfbb | 709 | AliTagAnalysis * tagAna = new AliTagAnalysis(); |
710 | tagAna->ChainGridTags(result); | |
711 | ||
712 | // Query the tag file and make the analysis chain | |
713 | TChain * analysisChain = new TChain(fESDTreeName) ; | |
91605856 | 714 | analysisChain = tagAna->QueryTags(runCuts, lhcCuts, detCuts, evtCuts); |
b86ddfbb | 715 | |
716 | // Process the events | |
717 | rv = ProcessChain(analysisChain) ; | |
718 | ||
9c0977a1 | 719 | #else |
50026a5f | 720 | rv = kFALSE; |
9c0977a1 | 721 | #endif |
50026a5f | 722 | return rv ; |
b86ddfbb | 723 | } |
724 | ||
725 | //______________________________________________________________________ | |
91605856 | 726 | Bool_t AliAnalysisGoodies::ProcessTagXmlCollection(const char * xmlFile, const char * runCuts, const char * lhcCuts, const char * detCuts, const char * evtCuts) const |
b86ddfbb | 727 | { |
728 | // process the events in a xml ESD collection with an Analysis Task | |
729 | // usage ProcessLocalEsdFile(xmlFile) | |
730 | // xmlFile: is the local xml file with the tag collection ( ex: tagCollection.xml) | |
731 | ||
732 | Bool_t rv = kTRUE ; | |
733 | ||
734 | if ( !evtCuts && !runCuts ) { | |
735 | AliError("No Tag cuts provided") ; | |
736 | return kFALSE ; | |
737 | } | |
738 | ||
739 | printf("*** Process ***\n"); | |
740 | printf("*** Wk-Dir = |%s| \n",gSystem->WorkingDirectory()); | |
741 | printf("*** Coll = |%s| \n",xmlFile); | |
742 | ||
9c0977a1 | 743 | #ifdef WITHALIEN |
744 | ||
b86ddfbb | 745 | // check if file is local or alien |
746 | if ( gSystem->AccessPathName(xmlFile) ) | |
747 | TGrid::Connect("alien://"); | |
748 | ||
e9678f9b | 749 | TGridCollection * collection = (TGridCollection*)gROOT->ProcessLine(Form("TAlienCollection::Open(\"%s\", 0)",xmlFile)); |
b86ddfbb | 750 | if (! collection) { |
751 | AliError(Form("%s not found", xmlFile)) ; | |
752 | return kFALSE ; | |
753 | } | |
754 | ||
e9678f9b | 755 | TGridResult* result = collection->GetGridResult("", 0, 0); |
b86ddfbb | 756 | AliTagAnalysis * tagAna = new AliTagAnalysis(); |
757 | tagAna->ChainGridTags(result); | |
758 | ||
759 | // Query the tag file and make the analysis chain | |
760 | TChain * analysisChain = new TChain(fESDTreeName) ; | |
91605856 | 761 | analysisChain = tagAna->QueryTags(runCuts, lhcCuts, detCuts, evtCuts); |
b86ddfbb | 762 | |
763 | // Process the events | |
764 | rv = ProcessChain(analysisChain) ; | |
765 | ||
9c0977a1 | 766 | #else |
50026a5f | 767 | rv = kFALSE; |
9c0977a1 | 768 | #endif |
50026a5f | 769 | return rv ; |
b86ddfbb | 770 | } |
771 | ||
772 | //______________________________________________________________________ | |
c49bca36 | 773 | Bool_t AliAnalysisGoodies::Register( const char * lfndir, const char * pfndir, const char * file) |
b86ddfbb | 774 | { |
775 | // register files already stored in a MSS into the AliEn catalog | |
776 | // usage: Register(lfndir, pfndir, pfnFileName) | |
777 | // lfndir : AliEn directory ( ex: /alice/data/2006/LHC06c/PHOS_TestBeam/ ) | |
778 | // pfndir : MSS directory ( ex: /castor/cern.ch/alice/testbeam/phos/2006 ) | |
779 | // file : text file with a list of the file names to be registered | |
780 | ||
781 | Bool_t rv = kTRUE ; | |
782 | fTimer.Start() ; | |
783 | ||
784 | ifstream in; | |
785 | in.open(file); | |
786 | if ( in.bad() ) { | |
787 | AliError(Form("Cannot open file %s\n", file)) ; | |
788 | return kFALSE ; | |
789 | } | |
790 | ||
791 | TGrid::Connect("alien://"); | |
792 | ||
793 | char fileName[1024] ; | |
794 | ||
795 | while (1) { | |
796 | in >> fileName ; | |
797 | if (!in.good()) | |
798 | break; | |
799 | char lfn[1024] ; | |
800 | ||
801 | sprintf(lfn, "%s/%s", lfndir, fileName) ; | |
802 | ||
803 | char pfn[1024] ; | |
804 | ||
805 | sprintf(pfn, "castor://Alice::CERN::Castor2/%s/%s", pfndir, fileName) ; | |
806 | ||
807 | printf("Register %s as %s\n", pfn, lfn) ; | |
808 | ||
809 | gGrid->Register(lfn, pfn) ; | |
810 | } | |
811 | ||
812 | fTimer.Stop(); | |
813 | fTimer.Print(); | |
814 | ||
815 | return rv; | |
816 | } | |
817 |