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19442b86 | 1 | /************************************************************************** |
2 | * Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. * | |
3 | * * | |
4 | * Author: The ALICE Off-line Project. * | |
5 | * Contributors are mentioned in the code where appropriate. * | |
6 | * * | |
7 | * Permission to use, copy, modify and distribute this software and its * | |
8 | * documentation strictly for non-commercial purposes is hereby granted * | |
9 | * without fee, provided that the above copyright notice appears in all * | |
10 | * copies and that both the copyright notice and this permission notice * | |
11 | * appear in the supporting documentation. The authors make no claims * | |
12 | * about the suitability of this software for any purpose. It is * | |
13 | * provided "as is" without express or implied warranty. * | |
14 | **************************************************************************/ | |
15 | ||
16 | /* $Id: AliUnfolding.cxx 31168 2009-02-23 15:18:45Z jgrosseo $ */ | |
17 | ||
18 | // This class allows 1-dimensional unfolding. | |
19 | // Methods that are implemented are chi2 minimization and bayesian unfolding. | |
20 | // | |
21 | // Author: Jan.Fiete.Grosse-Oetringhaus@cern.ch | |
22 | ||
23 | #include "AliUnfolding.h" | |
24 | #include <TH1F.h> | |
25 | #include <TH2F.h> | |
26 | #include <TVirtualFitter.h> | |
27 | #include <TMath.h> | |
28 | #include <TCanvas.h> | |
29 | #include <TF1.h> | |
9e065ad2 | 30 | #include <TExec.h> |
31 | #include "Riostream.h" | |
32 | #include "TROOT.h" | |
33 | ||
34 | using namespace std; //required for resolving the 'cout' symbol | |
19442b86 | 35 | |
36 | TMatrixD* AliUnfolding::fgCorrelationMatrix = 0; | |
95e970ca | 37 | TMatrixD* AliUnfolding::fgCorrelationMatrixSquared = 0; |
19442b86 | 38 | TMatrixD* AliUnfolding::fgCorrelationCovarianceMatrix = 0; |
39 | TVectorD* AliUnfolding::fgCurrentESDVector = 0; | |
40 | TVectorD* AliUnfolding::fgEntropyAPriori = 0; | |
95e970ca | 41 | TVectorD* AliUnfolding::fgEfficiency = 0; |
9e065ad2 | 42 | |
43 | TAxis* AliUnfolding::fgUnfoldedAxis = 0; | |
44 | TAxis* AliUnfolding::fgMeasuredAxis = 0; | |
19442b86 | 45 | |
46 | TF1* AliUnfolding::fgFitFunction = 0; | |
47 | ||
48 | AliUnfolding::MethodType AliUnfolding::fgMethodType = AliUnfolding::kInvalid; | |
49 | Int_t AliUnfolding::fgMaxInput = -1; // bins in measured histogram | |
50 | Int_t AliUnfolding::fgMaxParams = -1; // bins in unfolded histogram = number of fit params | |
51 | Float_t AliUnfolding::fgOverflowBinLimit = -1; | |
52 | ||
53 | AliUnfolding::RegularizationType AliUnfolding::fgRegularizationType = AliUnfolding::kPol1; | |
54 | Float_t AliUnfolding::fgRegularizationWeight = 10000; | |
55 | Int_t AliUnfolding::fgSkipBinsBegin = 0; | |
56 | Float_t AliUnfolding::fgMinuitStepSize = 0.1; // (usually not needed to be changed) step size in minimization | |
9e065ad2 | 57 | Float_t AliUnfolding::fgMinuitPrecision = 1e-6; // minuit precision |
523dbb5f | 58 | Int_t AliUnfolding::fgMinuitMaxIterations = 1000000; // minuit maximum number of iterations\r |
9f070ef5 | 59 | Double_t AliUnfolding::fgMinuitStrategy = 1.; // minuit strategy |
95e970ca | 60 | Bool_t AliUnfolding::fgMinimumInitialValue = kFALSE; // set all initial values at least to the smallest value among the initial values |
61 | Float_t AliUnfolding::fgMinimumInitialValueFix = -1; | |
9e065ad2 | 62 | Bool_t AliUnfolding::fgNormalizeInput = kFALSE; // normalize input spectrum |
95e970ca | 63 | Float_t AliUnfolding::fgNotFoundEvents = 0; |
64 | Bool_t AliUnfolding::fgSkipBin0InChi2 = kFALSE; | |
19442b86 | 65 | |
66 | Float_t AliUnfolding::fgBayesianSmoothing = 1; // smoothing parameter (0 = no smoothing) | |
651e2088 | 67 | Int_t AliUnfolding::fgBayesianIterations = 10; // number of iterations in Bayesian method |
19442b86 | 68 | |
69 | Bool_t AliUnfolding::fgDebug = kFALSE; | |
70 | ||
95e970ca | 71 | Int_t AliUnfolding::fgCallCount = 0; |
72 | ||
9e065ad2 | 73 | Int_t AliUnfolding::fgPowern = 5; |
74 | ||
75 | Double_t AliUnfolding::fChi2FromFit = 0.; | |
76 | Double_t AliUnfolding::fPenaltyVal = 0.; | |
77 | Double_t AliUnfolding::fAvgResidual = 0.; | |
78 | ||
79 | Int_t AliUnfolding::fgPrintChi2Details = 0; | |
80 | ||
81 | TCanvas *AliUnfolding::fgCanvas = 0; | |
82 | TH1 *AliUnfolding::fghUnfolded = 0; | |
83 | TH2 *AliUnfolding::fghCorrelation = 0; | |
84 | TH1 *AliUnfolding::fghEfficiency = 0; | |
85 | TH1 *AliUnfolding::fghMeasured = 0; | |
86 | ||
19442b86 | 87 | ClassImp(AliUnfolding) |
88 | ||
89 | //____________________________________________________________________ | |
90 | void AliUnfolding::SetUnfoldingMethod(MethodType methodType) | |
91 | { | |
92 | // set unfolding method | |
93 | fgMethodType = methodType; | |
94 | ||
95 | const char* name = 0; | |
96 | switch (methodType) | |
97 | { | |
98 | case kInvalid: name = "INVALID"; break; | |
99 | case kChi2Minimization: name = "Chi2 Minimization"; break; | |
100 | case kBayesian: name = "Bayesian unfolding"; break; | |
101 | case kFunction: name = "Functional fit"; break; | |
102 | } | |
103 | Printf("AliUnfolding::SetUnfoldingMethod: %s enabled.", name); | |
104 | } | |
105 | ||
106 | //____________________________________________________________________ | |
107 | void AliUnfolding::SetCreateOverflowBin(Float_t overflowBinLimit) | |
108 | { | |
109 | // enable the creation of a overflow bin that includes all statistics below the given limit | |
110 | ||
111 | fgOverflowBinLimit = overflowBinLimit; | |
112 | ||
113 | Printf("AliUnfolding::SetCreateOverflowBin: overflow bin limit set to %f", overflowBinLimit); | |
114 | } | |
115 | ||
116 | //____________________________________________________________________ | |
117 | void AliUnfolding::SetSkipBinsBegin(Int_t nBins) | |
118 | { | |
119 | // set number of skipped bins in regularization | |
120 | ||
121 | fgSkipBinsBegin = nBins; | |
122 | ||
123 | Printf("AliUnfolding::SetSkipBinsBegin: skipping %d bins at the beginning of the spectrum in the regularization.", fgSkipBinsBegin); | |
124 | } | |
125 | ||
126 | //____________________________________________________________________ | |
127 | void AliUnfolding::SetNbins(Int_t nMeasured, Int_t nUnfolded) | |
128 | { | |
129 | // set number of bins in the input (measured) distribution and in the unfolded distribution | |
130 | fgMaxInput = nMeasured; | |
131 | fgMaxParams = nUnfolded; | |
132 | ||
95e970ca | 133 | if (fgCorrelationMatrix) |
134 | { | |
135 | delete fgCorrelationMatrix; | |
136 | fgCorrelationMatrix = 0; | |
137 | } | |
138 | if (fgCorrelationMatrixSquared) | |
139 | { | |
140 | fgCorrelationMatrixSquared = 0; | |
141 | delete fgCorrelationMatrixSquared; | |
142 | } | |
143 | if (fgCorrelationCovarianceMatrix) | |
144 | { | |
145 | delete fgCorrelationCovarianceMatrix; | |
146 | fgCorrelationCovarianceMatrix = 0; | |
147 | } | |
148 | if (fgCurrentESDVector) | |
149 | { | |
150 | delete fgCurrentESDVector; | |
151 | fgCurrentESDVector = 0; | |
152 | } | |
153 | if (fgEntropyAPriori) | |
154 | { | |
155 | delete fgEntropyAPriori; | |
156 | fgEntropyAPriori = 0; | |
157 | } | |
158 | if (fgEfficiency) | |
159 | { | |
160 | delete fgEfficiency; | |
161 | fgEfficiency = 0; | |
162 | } | |
9e065ad2 | 163 | if (fgUnfoldedAxis) |
164 | { | |
165 | delete fgUnfoldedAxis; | |
166 | fgUnfoldedAxis = 0; | |
167 | } | |
168 | if (fgMeasuredAxis) | |
95e970ca | 169 | { |
9e065ad2 | 170 | delete fgMeasuredAxis; |
171 | fgMeasuredAxis = 0; | |
95e970ca | 172 | } |
173 | ||
19442b86 | 174 | Printf("AliUnfolding::SetNbins: Set %d measured bins and %d unfolded bins", nMeasured, nUnfolded); |
175 | } | |
176 | ||
177 | //____________________________________________________________________ | |
178 | void AliUnfolding::SetChi2Regularization(RegularizationType type, Float_t weight) | |
179 | { | |
180 | // | |
181 | // sets the parameters for chi2 minimization | |
182 | // | |
183 | ||
184 | fgRegularizationType = type; | |
185 | fgRegularizationWeight = weight; | |
186 | ||
187 | Printf("AliUnfolding::SetChi2Regularization --> Regularization set to %d with weight %f", (Int_t) type, weight); | |
188 | } | |
189 | ||
190 | //____________________________________________________________________ | |
191 | void AliUnfolding::SetBayesianParameters(Float_t smoothing, Int_t nIterations) | |
192 | { | |
193 | // | |
194 | // sets the parameters for Bayesian unfolding | |
195 | // | |
196 | ||
197 | fgBayesianSmoothing = smoothing; | |
198 | fgBayesianIterations = nIterations; | |
199 | ||
523dbb5f | 200 | Printf("AliUnfolding::SetBayesianParameters --> Parameters set to %d iterations with smoothing %f", fgBayesianIterations, fgBayesianSmoothing);\r |
19442b86 | 201 | } |
202 | ||
203 | //____________________________________________________________________ | |
204 | void AliUnfolding::SetFunction(TF1* function) | |
205 | { | |
206 | // set function for unfolding with a fit function | |
207 | ||
208 | fgFitFunction = function; | |
209 | ||
210 | Printf("AliUnfolding::SetFunction: Set fit function with %d parameters.", function->GetNpar()); | |
211 | } | |
212 | ||
213 | //____________________________________________________________________ | |
214 | Int_t AliUnfolding::Unfold(TH2* correlation, TH1* efficiency, TH1* measured, TH1* initialConditions, TH1* result, Bool_t check) | |
215 | { | |
216 | // unfolds with unfolding method fgMethodType | |
217 | // | |
218 | // parameters: | |
219 | // correlation: response matrix as measured vs. generated | |
220 | // efficiency: (optional) efficiency that is applied on the unfolded spectrum, i.e. it has to be in unfolded variables. If 0 no efficiency is applied. | |
221 | // measured: the measured spectrum | |
222 | // initialConditions: (optional) initial conditions for the unfolding. if 0 the measured spectrum is used as initial conditions. | |
223 | // result: target for the unfolded result | |
224 | // check: depends on the unfolding method, see comments in specific functions | |
95e970ca | 225 | // |
226 | // return code: see UnfoldWithMinuit/UnfoldWithBayesian/UnfoldWithFunction | |
19442b86 | 227 | |
228 | if (fgMaxInput == -1) | |
229 | { | |
230 | Printf("AliUnfolding::Unfold: WARNING. Number of measured bins not set with SetNbins. Using number of bins in measured distribution"); | |
231 | fgMaxInput = measured->GetNbinsX(); | |
232 | } | |
233 | if (fgMaxParams == -1) | |
234 | { | |
235 | Printf("AliUnfolding::Unfold: WARNING. Number of unfolded bins not set with SetNbins. Using number of bins in measured distribution"); | |
236 | fgMaxParams = measured->GetNbinsX(); | |
237 | } | |
238 | ||
239 | if (fgOverflowBinLimit > 0) | |
240 | CreateOverflowBin(correlation, measured); | |
241 | ||
242 | switch (fgMethodType) | |
243 | { | |
244 | case kInvalid: | |
245 | { | |
246 | Printf("AliUnfolding::Unfold: ERROR: Unfolding method not set. Use SetUnfoldingMethod. Exiting..."); | |
247 | return -1; | |
248 | } | |
249 | case kChi2Minimization: | |
250 | return UnfoldWithMinuit(correlation, efficiency, measured, initialConditions, result, check); | |
251 | case kBayesian: | |
252 | return UnfoldWithBayesian(correlation, efficiency, measured, initialConditions, result); | |
253 | case kFunction: | |
254 | return UnfoldWithFunction(correlation, efficiency, measured, initialConditions, result); | |
255 | } | |
9e065ad2 | 256 | |
257 | ||
258 | ||
19442b86 | 259 | return -1; |
260 | } | |
261 | ||
262 | //____________________________________________________________________ | |
95e970ca | 263 | void AliUnfolding::SetStaticVariables(TH2* correlation, TH1* measured, TH1* efficiency) |
19442b86 | 264 | { |
265 | // fill static variables needed for minuit fit | |
266 | ||
267 | if (!fgCorrelationMatrix) | |
268 | fgCorrelationMatrix = new TMatrixD(fgMaxInput, fgMaxParams); | |
95e970ca | 269 | if (!fgCorrelationMatrixSquared) |
270 | fgCorrelationMatrixSquared = new TMatrixD(fgMaxInput, fgMaxParams); | |
19442b86 | 271 | if (!fgCorrelationCovarianceMatrix) |
272 | fgCorrelationCovarianceMatrix = new TMatrixD(fgMaxInput, fgMaxInput); | |
273 | if (!fgCurrentESDVector) | |
274 | fgCurrentESDVector = new TVectorD(fgMaxInput); | |
275 | if (!fgEntropyAPriori) | |
276 | fgEntropyAPriori = new TVectorD(fgMaxParams); | |
95e970ca | 277 | if (!fgEfficiency) |
278 | fgEfficiency = new TVectorD(fgMaxParams); | |
9e065ad2 | 279 | if (!fgUnfoldedAxis) |
280 | delete fgUnfoldedAxis; | |
281 | fgUnfoldedAxis = new TAxis(*(correlation->GetXaxis())); | |
282 | if (!fgMeasuredAxis) | |
283 | delete fgMeasuredAxis; | |
284 | fgMeasuredAxis = new TAxis(*(correlation->GetYaxis())); | |
285 | ||
19442b86 | 286 | fgCorrelationMatrix->Zero(); |
287 | fgCorrelationCovarianceMatrix->Zero(); | |
288 | fgCurrentESDVector->Zero(); | |
289 | fgEntropyAPriori->Zero(); | |
290 | ||
291 | // normalize correction for given nPart | |
292 | for (Int_t i=1; i<=correlation->GetNbinsX(); ++i) | |
293 | { | |
294 | Double_t sum = correlation->Integral(i, i, 1, correlation->GetNbinsY()); | |
295 | if (sum <= 0) | |
296 | continue; | |
297 | Float_t maxValue = 0; | |
298 | Int_t maxBin = -1; | |
299 | for (Int_t j=1; j<=correlation->GetNbinsY(); ++j) | |
300 | { | |
301 | // find most probably value | |
302 | if (maxValue < correlation->GetBinContent(i, j)) | |
303 | { | |
304 | maxValue = correlation->GetBinContent(i, j); | |
305 | maxBin = j; | |
306 | } | |
307 | ||
308 | // npart sum to 1 | |
95e970ca | 309 | correlation->SetBinContent(i, j, correlation->GetBinContent(i, j) / sum);// * correlation->GetXaxis()->GetBinWidth(i)); |
19442b86 | 310 | correlation->SetBinError(i, j, correlation->GetBinError(i, j) / sum); |
311 | ||
312 | if (i <= fgMaxParams && j <= fgMaxInput) | |
95e970ca | 313 | { |
19442b86 | 314 | (*fgCorrelationMatrix)(j-1, i-1) = correlation->GetBinContent(i, j); |
95e970ca | 315 | (*fgCorrelationMatrixSquared)(j-1, i-1) = correlation->GetBinContent(i, j) * correlation->GetBinContent(i, j); |
316 | } | |
19442b86 | 317 | } |
318 | ||
319 | //printf("MPV for Ntrue = %f is %f\n", fCurrentCorrelation->GetXaxis()->GetBinCenter(i), fCurrentCorrelation->GetYaxis()->GetBinCenter(maxBin)); | |
320 | } | |
321 | ||
322 | //normalize measured | |
95e970ca | 323 | Float_t smallestError = 1; |
19442b86 | 324 | if (fgNormalizeInput) |
95e970ca | 325 | { |
326 | Float_t sumMeasured = measured->Integral(); | |
327 | measured->Scale(1.0 / sumMeasured); | |
328 | smallestError /= sumMeasured; | |
329 | } | |
19442b86 | 330 | |
331 | for (Int_t i=0; i<fgMaxInput; ++i) | |
332 | { | |
333 | (*fgCurrentESDVector)[i] = measured->GetBinContent(i+1); | |
334 | if (measured->GetBinError(i+1) > 0) | |
95e970ca | 335 | { |
19442b86 | 336 | (*fgCorrelationCovarianceMatrix)(i, i) = (Double_t) 1e-6 / measured->GetBinError(i+1) / measured->GetBinError(i+1); |
95e970ca | 337 | } |
338 | else // in this case put error of 1, otherwise 0 bins are not added to the chi2... | |
339 | (*fgCorrelationCovarianceMatrix)(i, i) = (Double_t) 1e-6 / smallestError / smallestError; | |
19442b86 | 340 | |
341 | if ((*fgCorrelationCovarianceMatrix)(i, i) > 1e7) | |
342 | (*fgCorrelationCovarianceMatrix)(i, i) = 0; | |
343 | //Printf("%d, %e", i, (*fgCorrelationCovarianceMatrix)(i, i)); | |
344 | } | |
95e970ca | 345 | |
346 | // efficiency is expected to match bin width of result | |
347 | for (Int_t i=0; i<fgMaxParams; ++i) | |
348 | { | |
349 | (*fgEfficiency)(i) = efficiency->GetBinContent(i+1); | |
95e970ca | 350 | } |
9e065ad2 | 351 | |
352 | if (correlation->GetNbinsX() != fgMaxParams || correlation->GetNbinsY() != fgMaxInput) | |
353 | cout << "Response histo has incorrect dimensions; expect (" << fgMaxParams << ", " << fgMaxInput << "), got (" << correlation->GetNbinsX() << ", " << correlation->GetNbinsY() << ")" << endl; | |
354 | ||
19442b86 | 355 | } |
356 | ||
357 | //____________________________________________________________________ | |
358 | Int_t AliUnfolding::UnfoldWithMinuit(TH2* correlation, TH1* efficiency, TH1* measured, TH1* initialConditions, TH1* result, Bool_t check) | |
359 | { | |
360 | // | |
361 | // implementation of unfolding (internal function) | |
362 | // | |
363 | // unfolds <measured> using response from <correlation> and effiency <efficiency> | |
364 | // output is in <result> | |
365 | // <initialConditions> set the initial values for the minimization, if 0 <measured> is used | |
95e970ca | 366 | // negative values in initialConditions mean that the given parameter is fixed to the absolute of the value |
19442b86 | 367 | // if <check> is true no unfolding is made, instead only the chi2 without unfolding is printed |
368 | // | |
369 | // returns minuit status (0 = success), (-1 when check was set) | |
370 | // | |
371 | ||
95e970ca | 372 | SetStaticVariables(correlation, measured, efficiency); |
19442b86 | 373 | |
374 | // Initialize TMinuit via generic fitter interface | |
95e970ca | 375 | Int_t params = fgMaxParams; |
376 | if (fgNotFoundEvents > 0) | |
377 | params++; | |
378 | ||
379 | TVirtualFitter *minuit = TVirtualFitter::Fitter(0, params); | |
19442b86 | 380 | Double_t arglist[100]; |
9e065ad2 | 381 | // minuit->SetDefaultFitter("Minuit2"); |
19442b86 | 382 | |
383 | // disable any output (-1), unfortuantly we do not see warnings anymore then. Have to find another way... | |
384 | arglist[0] = 0; | |
385 | minuit->ExecuteCommand("SET PRINT", arglist, 1); | |
386 | ||
387 | // however, enable warnings | |
388 | //minuit->ExecuteCommand("SET WAR", arglist, 0); | |
389 | ||
390 | // set minimization function | |
391 | minuit->SetFCN(Chi2Function); | |
392 | ||
9e065ad2 | 393 | // set precision |
394 | minuit->SetPrecision(fgMinuitPrecision); | |
395 | ||
d22beb7f | 396 | minuit->SetMaxIterations(fgMinuitMaxIterations); |
397 | ||
9f070ef5 | 398 | minuit->ExecuteCommand("SET STRATEGY",&fgMinuitStrategy,1); |
399 | ||
19442b86 | 400 | for (Int_t i=0; i<fgMaxParams; i++) |
401 | (*fgEntropyAPriori)[i] = 1; | |
402 | ||
95e970ca | 403 | // set initial conditions as a-priori distribution for MRX regularization |
404 | /* | |
405 | for (Int_t i=0; i<fgMaxParams; i++) | |
406 | if (initialConditions && initialConditions->GetBinContent(i+1) > 0) | |
407 | (*fgEntropyAPriori)[i] = initialConditions->GetBinContent(i+1); | |
408 | */ | |
409 | ||
19442b86 | 410 | if (!initialConditions) { |
411 | initialConditions = measured; | |
412 | } else { | |
413 | Printf("AliUnfolding::UnfoldWithMinuit: Using different initial conditions..."); | |
414 | //new TCanvas; initialConditions->DrawCopy(); | |
415 | if (fgNormalizeInput) | |
416 | initialConditions->Scale(1.0 / initialConditions->Integral()); | |
417 | } | |
418 | ||
95e970ca | 419 | // extract minimum value from initial conditions (if we set a value to 0 it will stay 0) |
deaac8b1 | 420 | Float_t minValue = 1e35; |
95e970ca | 421 | if (fgMinimumInitialValueFix < 0) |
422 | { | |
423 | for (Int_t i=0; i<fgMaxParams; ++i) | |
424 | { | |
425 | Int_t bin = initialConditions->GetXaxis()->FindBin(result->GetXaxis()->GetBinCenter(i+1)); | |
426 | if (initialConditions->GetBinContent(bin) > 0) | |
427 | minValue = TMath::Min(minValue, (Float_t) initialConditions->GetBinContent(bin)); | |
428 | } | |
429 | } | |
430 | else | |
431 | minValue = fgMinimumInitialValueFix; | |
432 | ||
19442b86 | 433 | Double_t* results = new Double_t[fgMaxParams+1]; |
434 | for (Int_t i=0; i<fgMaxParams; ++i) | |
435 | { | |
95e970ca | 436 | Int_t bin = initialConditions->GetXaxis()->FindBin(result->GetXaxis()->GetBinCenter(i+1)); |
437 | results[i] = initialConditions->GetBinContent(bin); | |
19442b86 | 438 | |
95e970ca | 439 | Bool_t fix = kFALSE; |
440 | if (results[i] < 0) | |
441 | { | |
442 | fix = kTRUE; | |
443 | results[i] = -results[i]; | |
444 | } | |
445 | ||
446 | if (!fix && fgMinimumInitialValue && results[i] < minValue) | |
447 | results[i] = minValue; | |
448 | ||
19442b86 | 449 | // minuit sees squared values to prevent it from going negative... |
450 | results[i] = TMath::Sqrt(results[i]); | |
451 | ||
95e970ca | 452 | minuit->SetParameter(i, Form("param%d", i), results[i], (fix) ? 0 : fgMinuitStepSize, 0, 0); |
453 | } | |
454 | if (fgNotFoundEvents > 0) | |
455 | { | |
456 | results[fgMaxParams] = efficiency->GetBinContent(1); | |
457 | minuit->SetParameter(fgMaxParams, "vtx0", results[fgMaxParams], fgMinuitStepSize / 100, 0.01, 0.80); | |
19442b86 | 458 | } |
459 | ||
460 | Int_t dummy = 0; | |
461 | Double_t chi2 = 0; | |
462 | Chi2Function(dummy, 0, chi2, results, 0); | |
463 | printf("AliUnfolding::UnfoldWithMinuit: Chi2 of initial parameters is = %f\n", chi2); | |
464 | ||
465 | if (check) | |
466 | { | |
467 | DrawGuess(results); | |
468 | delete[] results; | |
469 | return -1; | |
470 | } | |
471 | ||
472 | // first param is number of iterations, second is precision.... | |
03650114 | 473 | arglist[0] = (float)fgMinuitMaxIterations; |
474 | // arglist[1] = 1e-5; | |
9e065ad2 | 475 | // minuit->ExecuteCommand("SET PRINT", arglist, 3); |
476 | // minuit->ExecuteCommand("SCAN", arglist, 0); | |
19442b86 | 477 | Int_t status = minuit->ExecuteCommand("MIGRAD", arglist, 1); |
478 | Printf("AliUnfolding::UnfoldWithMinuit: MINUIT status is %d", status); | |
479 | //printf("!!!!!!!!!!!!!! MIGRAD finished: Starting MINOS !!!!!!!!!!!!!!"); | |
480 | //minuit->ExecuteCommand("MINOS", arglist, 0); | |
481 | ||
95e970ca | 482 | if (fgNotFoundEvents > 0) |
483 | { | |
484 | results[fgMaxParams] = minuit->GetParameter(fgMaxParams); | |
485 | Printf("Efficiency for bin 0 changed from %f to %f", efficiency->GetBinContent(1), results[fgMaxParams]); | |
486 | efficiency->SetBinContent(1, results[fgMaxParams]); | |
487 | } | |
488 | ||
19442b86 | 489 | for (Int_t i=0; i<fgMaxParams; ++i) |
490 | { | |
491 | results[i] = minuit->GetParameter(i); | |
492 | Double_t value = results[i] * results[i]; | |
a9edd311 | 493 | // error is : 2 * (relError on results[i]) * (value) = 2 * (minuit->GetParError(i) / minuit->GetParameter(i)) * (minuit->GetParameter(i) * minuit->GetParameter(i)) |
b203a518 | 494 | Double_t error = 0; |
495 | if (TMath::IsNaN(minuit->GetParError(i))) | |
496 | Printf("WARNING: Parameter %d error is nan", i); | |
497 | else | |
a9edd311 | 498 | error = 2 * minuit->GetParError(i) * results[i]; |
19442b86 | 499 | |
500 | if (efficiency) | |
95e970ca | 501 | { |
9e065ad2 | 502 | //printf("value before efficiency correction: %f\n",value); |
19442b86 | 503 | if (efficiency->GetBinContent(i+1) > 0) |
504 | { | |
95e970ca | 505 | value /= efficiency->GetBinContent(i+1); |
506 | error /= efficiency->GetBinContent(i+1); | |
19442b86 | 507 | } |
508 | else | |
509 | { | |
95e970ca | 510 | value = 0; |
511 | error = 0; | |
19442b86 | 512 | } |
513 | } | |
9e065ad2 | 514 | //printf("value after efficiency correction: %f +/- %f\n",value,error); |
19442b86 | 515 | result->SetBinContent(i+1, value); |
516 | result->SetBinError(i+1, error); | |
517 | } | |
d22beb7f | 518 | |
519 | Int_t tmpCallCount = fgCallCount; | |
520 | fgCallCount = 0; // needs to be 0 so that the Chi2Function prints its output | |
95e970ca | 521 | Chi2Function(dummy, 0, chi2, results, 0); |
d22beb7f | 522 | |
523 | Printf("AliUnfolding::UnfoldWithMinuit: iterations %d. Chi2 of final parameters is = %f", tmpCallCount, chi2); | |
95e970ca | 524 | |
19442b86 | 525 | delete[] results; |
526 | ||
527 | return status; | |
528 | } | |
529 | ||
530 | //____________________________________________________________________ | |
531 | Int_t AliUnfolding::UnfoldWithBayesian(TH2* correlation, TH1* aEfficiency, TH1* measured, TH1* initialConditions, TH1* aResult) | |
532 | { | |
533 | // | |
534 | // unfolds a spectrum using the Bayesian method | |
535 | // | |
536 | ||
537 | if (measured->Integral() <= 0) | |
538 | { | |
539 | Printf("AliUnfolding::UnfoldWithBayesian: ERROR: The measured spectrum is empty"); | |
540 | return -1; | |
541 | } | |
542 | ||
543 | const Int_t kStartBin = 0; | |
544 | ||
545 | Int_t kMaxM = fgMaxInput; //<= fCurrentCorrelation->GetNbinsY(); // max measured axis | |
546 | Int_t kMaxT = fgMaxParams; //<= fCurrentCorrelation->GetNbinsX(); // max true axis | |
547 | ||
548 | // convergence limit: kMaxT * 0.001^2 = kMaxT * 1e-6 (e.g. 250 bins --> 2.5 e-4) | |
549 | const Double_t kConvergenceLimit = kMaxT * 1e-6; | |
550 | ||
551 | // store information in arrays, to increase processing speed (~ factor 5) | |
552 | Double_t* measuredCopy = new Double_t[kMaxM]; | |
553 | Double_t* measuredError = new Double_t[kMaxM]; | |
554 | Double_t* prior = new Double_t[kMaxT]; | |
555 | Double_t* result = new Double_t[kMaxT]; | |
556 | Double_t* efficiency = new Double_t[kMaxT]; | |
95e970ca | 557 | Double_t* binWidths = new Double_t[kMaxT]; |
523dbb5f | 558 | Double_t* normResponse = new Double_t[kMaxT]; \r |
19442b86 | 559 | |
560 | Double_t** response = new Double_t*[kMaxT]; | |
561 | Double_t** inverseResponse = new Double_t*[kMaxT]; | |
562 | for (Int_t i=0; i<kMaxT; i++) | |
563 | { | |
564 | response[i] = new Double_t[kMaxM]; | |
565 | inverseResponse[i] = new Double_t[kMaxM]; | |
523dbb5f | 566 | normResponse[i] = 0;\r |
19442b86 | 567 | } |
568 | ||
569 | // for normalization | |
570 | Float_t measuredIntegral = measured->Integral(); | |
571 | for (Int_t m=0; m<kMaxM; m++) | |
572 | { | |
573 | measuredCopy[m] = measured->GetBinContent(m+1) / measuredIntegral; | |
574 | measuredError[m] = measured->GetBinError(m+1) / measuredIntegral; | |
575 | ||
576 | for (Int_t t=0; t<kMaxT; t++) | |
577 | { | |
578 | response[t][m] = correlation->GetBinContent(t+1, m+1); | |
579 | inverseResponse[t][m] = 0; | |
523dbb5f | 580 | normResponse[t] += correlation->GetBinContent(t+1, m+1);\r |
19442b86 | 581 | } |
582 | } | |
583 | ||
584 | for (Int_t t=0; t<kMaxT; t++) | |
585 | { | |
651e2088 | 586 | if (aEfficiency) |
19442b86 | 587 | { |
588 | efficiency[t] = aEfficiency->GetBinContent(t+1); | |
589 | } | |
590 | else | |
591 | efficiency[t] = 1; | |
592 | ||
593 | prior[t] = measuredCopy[t]; | |
594 | result[t] = 0; | |
95e970ca | 595 | binWidths[t] = aResult->GetXaxis()->GetBinWidth(t+1); |
523dbb5f | 596 | \r |
597 | for (Int_t m=0; m<kMaxM; m++) { // Normalise response matrix\r | |
598 | if (normResponse[t] != 0) \r | |
599 | response[t][m] /= normResponse[t];\r | |
600 | else\r | |
601 | Printf("AliUnfolding::UnfoldWithBayesian: Empty row,column in response matrix, for truth bin %d",t);\r | |
602 | }\r | |
19442b86 | 603 | } |
604 | ||
605 | // pick prior distribution | |
606 | if (initialConditions) | |
607 | { | |
608 | printf("Using different starting conditions...\n"); | |
609 | // for normalization | |
610 | Float_t inputDistIntegral = initialConditions->Integral(); | |
611 | for (Int_t i=0; i<kMaxT; i++) | |
612 | prior[i] = initialConditions->GetBinContent(i+1) / inputDistIntegral; | |
613 | } | |
614 | ||
615 | //TH1F* convergence = new TH1F("convergence", "convergence", 200, 0.5, 200.5); | |
616 | ||
95e970ca | 617 | //new TCanvas; |
19442b86 | 618 | // unfold... |
95e970ca | 619 | for (Int_t i=0; i<fgBayesianIterations || fgBayesianIterations < 0; i++) |
19442b86 | 620 | { |
621 | if (fgDebug) | |
622 | Printf("AliUnfolding::UnfoldWithBayesian: iteration %i", i); | |
623 | ||
95e970ca | 624 | // calculate IR from Bayes theorem |
19442b86 | 625 | // IR_ji = R_ij * prior_i / sum_k(R_kj * prior_k) |
626 | ||
627 | Double_t chi2Measured = 0; | |
628 | for (Int_t m=0; m<kMaxM; m++) | |
629 | { | |
630 | Float_t norm = 0; | |
631 | for (Int_t t = kStartBin; t<kMaxT; t++) | |
523dbb5f | 632 | norm += response[t][m] * prior[t] * efficiency[t];\r |
19442b86 | 633 | |
634 | // calc. chi2: (measured - response * prior) / error | |
635 | if (measuredError[m] > 0) | |
636 | { | |
637 | Double_t value = (measuredCopy[m] - norm) / measuredError[m]; | |
638 | chi2Measured += value * value; | |
639 | } | |
640 | ||
641 | if (norm > 0) | |
642 | { | |
643 | for (Int_t t = kStartBin; t<kMaxT; t++) | |
523dbb5f | 644 | inverseResponse[t][m] = response[t][m] * prior[t] * efficiency[t] / norm;\r |
19442b86 | 645 | } |
646 | else | |
647 | { | |
648 | for (Int_t t = kStartBin; t<kMaxT; t++) | |
649 | inverseResponse[t][m] = 0; | |
650 | } | |
651 | } | |
652 | //Printf("chi2Measured of the last prior is %e", chi2Measured); | |
653 | ||
654 | for (Int_t t = kStartBin; t<kMaxT; t++) | |
655 | { | |
656 | Float_t value = 0; | |
657 | for (Int_t m=0; m<kMaxM; m++) | |
658 | value += inverseResponse[t][m] * measuredCopy[m]; | |
659 | ||
660 | if (efficiency[t] > 0) | |
661 | result[t] = value / efficiency[t]; | |
662 | else | |
663 | result[t] = 0; | |
664 | } | |
665 | ||
95e970ca | 666 | /* |
19442b86 | 667 | // draw intermediate result |
19442b86 | 668 | for (Int_t t=0; t<kMaxT; t++) |
95e970ca | 669 | { |
19442b86 | 670 | aResult->SetBinContent(t+1, result[t]); |
95e970ca | 671 | } |
672 | aResult->SetMarkerStyle(24+i); | |
19442b86 | 673 | aResult->SetMarkerColor(2); |
95e970ca | 674 | aResult->DrawCopy((i == 0) ? "P" : "PSAME"); |
19442b86 | 675 | */ |
95e970ca | 676 | |
19442b86 | 677 | Double_t chi2LastIter = 0; |
678 | // regularization (simple smoothing) | |
679 | for (Int_t t=kStartBin; t<kMaxT; t++) | |
680 | { | |
681 | Float_t newValue = 0; | |
682 | ||
683 | // 0 bin excluded from smoothing | |
684 | if (t > kStartBin+2 && t<kMaxT-1) | |
685 | { | |
95e970ca | 686 | Float_t average = (result[t-1] / binWidths[t-1] + result[t] / binWidths[t] + result[t+1] / binWidths[t+1]) / 3 * binWidths[t]; |
19442b86 | 687 | |
688 | // weight the average with the regularization parameter | |
689 | newValue = (1 - fgBayesianSmoothing) * result[t] + fgBayesianSmoothing * average; | |
690 | } | |
691 | else | |
692 | newValue = result[t]; | |
693 | ||
694 | // calculate chi2 (change from last iteration) | |
695 | if (prior[t] > 1e-5) | |
696 | { | |
697 | Double_t diff = (prior[t] - newValue) / prior[t]; | |
698 | chi2LastIter += diff * diff; | |
699 | } | |
700 | ||
701 | prior[t] = newValue; | |
702 | } | |
703 | //printf("Chi2 of %d iteration = %e\n", i, chi2LastIter); | |
704 | //convergence->Fill(i+1, chi2LastIter); | |
705 | ||
706 | if (fgBayesianIterations < 0 && chi2LastIter < kConvergenceLimit) | |
707 | { | |
708 | Printf("AliUnfolding::UnfoldWithBayesian: Stopped Bayesian unfolding after %d iterations at chi2(change since last iteration) of %e; chi2Measured of the last prior is %e", i, chi2LastIter, chi2Measured); | |
709 | break; | |
710 | } | |
711 | } // end of iterations | |
712 | ||
713 | //new TCanvas; convergence->DrawCopy(); gPad->SetLogy(); | |
714 | //delete convergence; | |
715 | ||
95e970ca | 716 | Float_t factor = 1; |
717 | if (!fgNormalizeInput) | |
718 | factor = measuredIntegral; | |
19442b86 | 719 | for (Int_t t=0; t<kMaxT; t++) |
95e970ca | 720 | aResult->SetBinContent(t+1, result[t] * factor); |
19442b86 | 721 | |
722 | delete[] measuredCopy; | |
723 | delete[] measuredError; | |
724 | delete[] prior; | |
725 | delete[] result; | |
726 | delete[] efficiency; | |
95e970ca | 727 | delete[] binWidths; |
523dbb5f | 728 | delete[] normResponse;\r |
19442b86 | 729 | |
730 | for (Int_t i=0; i<kMaxT; i++) | |
731 | { | |
732 | delete[] response[i]; | |
733 | delete[] inverseResponse[i]; | |
734 | } | |
735 | delete[] response; | |
736 | delete[] inverseResponse; | |
737 | ||
738 | return 0; | |
739 | ||
740 | // ******** | |
741 | // Calculate the covariance matrix, all arguments are taken from NIM,A362,487-498,1995 | |
742 | ||
743 | /*printf("Calculating covariance matrix. This may take some time...\n"); | |
744 | ||
745 | // check if this is the right one... | |
746 | TH1* sumHist = GetMultiplicityMC(inputRange, eventType)->ProjectionY("sumHist", 1, GetMultiplicityMC(inputRange, eventType)->GetNbinsX()); | |
747 | ||
748 | Int_t xBins = hInverseResponseBayes->GetNbinsX(); | |
749 | Int_t yBins = hInverseResponseBayes->GetNbinsY(); | |
750 | ||
751 | // calculate "unfolding matrix" Mij | |
752 | Float_t matrixM[251][251]; | |
753 | for (Int_t i=1; i<=xBins; i++) | |
754 | { | |
755 | for (Int_t j=1; j<=yBins; j++) | |
756 | { | |
757 | if (fCurrentEfficiency->GetBinContent(i) > 0) | |
758 | matrixM[i-1][j-1] = hInverseResponseBayes->GetBinContent(i, j) / fCurrentEfficiency->GetBinContent(i); | |
759 | else | |
760 | matrixM[i-1][j-1] = 0; | |
761 | } | |
762 | } | |
763 | ||
764 | Float_t* vectorn = new Float_t[yBins]; | |
765 | for (Int_t j=1; j<=yBins; j++) | |
766 | vectorn[j-1] = fCurrentESD->GetBinContent(j); | |
767 | ||
768 | // first part of covariance matrix, depends on input distribution n(E) | |
769 | Float_t cov1[251][251]; | |
770 | ||
771 | Float_t nEvents = fCurrentESD->Integral(); // N | |
772 | ||
773 | xBins = 20; | |
774 | yBins = 20; | |
775 | ||
776 | for (Int_t k=0; k<xBins; k++) | |
777 | { | |
778 | printf("In Cov1: %d\n", k); | |
779 | for (Int_t l=0; l<yBins; l++) | |
780 | { | |
781 | cov1[k][l] = 0; | |
782 | ||
783 | // sum_j Mkj Mlj n(Ej) * (1 - n(Ej) / N) | |
784 | for (Int_t j=0; j<yBins; j++) | |
785 | cov1[k][l] += matrixM[k][j] * matrixM[l][j] * vectorn[j] | |
786 | * (1.0 - vectorn[j] / nEvents); | |
787 | ||
788 | // - sum_i,j (i != j) Mki Mlj n(Ei) n(Ej) / N | |
789 | for (Int_t i=0; i<yBins; i++) | |
790 | for (Int_t j=0; j<yBins; j++) | |
791 | { | |
792 | if (i == j) | |
793 | continue; | |
794 | cov1[k][l] -= matrixM[k][i] * matrixM[l][j] * vectorn[i] | |
795 | * vectorn[j] / nEvents; | |
796 | } | |
797 | } | |
798 | } | |
799 | ||
800 | printf("Cov1 finished\n"); | |
801 | ||
802 | TH2F* cov = (TH2F*) hInverseResponseBayes->Clone("cov"); | |
803 | cov->Reset(); | |
804 | ||
805 | for (Int_t i=1; i<=xBins; i++) | |
806 | for (Int_t j=1; j<=yBins; j++) | |
807 | cov->SetBinContent(i, j, cov1[i-1][j-1]); | |
808 | ||
809 | new TCanvas; | |
810 | cov->Draw("COLZ"); | |
811 | ||
812 | // second part of covariance matrix, depends on response matrix | |
813 | Float_t cov2[251][251]; | |
814 | ||
815 | // Cov[P(Er|Cu), P(Es|Cu)] term | |
816 | Float_t covTerm[100][100][100]; | |
817 | for (Int_t r=0; r<yBins; r++) | |
818 | for (Int_t u=0; u<xBins; u++) | |
819 | for (Int_t s=0; s<yBins; s++) | |
820 | { | |
821 | if (r == s) | |
822 | covTerm[r][u][s] = 1.0 / sumHist->GetBinContent(u+1) * hResponse->GetBinContent(u+1, r+1) | |
823 | * (1.0 - hResponse->GetBinContent(u+1, r+1)); | |
824 | else | |
825 | covTerm[r][u][s] = - 1.0 / sumHist->GetBinContent(u+1) * hResponse->GetBinContent(u+1, r+1) | |
826 | * hResponse->GetBinContent(u+1, s+1); | |
827 | } | |
828 | ||
829 | for (Int_t k=0; k<xBins; k++) | |
830 | for (Int_t l=0; l<yBins; l++) | |
831 | { | |
832 | cov2[k][l] = 0; | |
833 | printf("In Cov2: %d %d\n", k, l); | |
834 | for (Int_t i=0; i<yBins; i++) | |
835 | for (Int_t j=0; j<yBins; j++) | |
836 | { | |
837 | //printf("In Cov2: %d %d %d %d\n", k, l, i, j); | |
838 | // calculate Cov(Mki, Mlj) = sum{ru},{su} ... | |
839 | Float_t tmpCov = 0; | |
840 | for (Int_t r=0; r<yBins; r++) | |
841 | for (Int_t u=0; u<xBins; u++) | |
842 | for (Int_t s=0; s<yBins; s++) | |
843 | { | |
844 | if (hResponse->GetBinContent(u+1, r+1) == 0 || hResponse->GetBinContent(u+1, s+1) == 0 | |
845 | || hResponse->GetBinContent(u+1, i+1) == 0) | |
846 | continue; | |
847 | ||
848 | tmpCov += BayesCovarianceDerivate(matrixM, hResponse, fCurrentEfficiency, k, i, r, u) | |
849 | * BayesCovarianceDerivate(matrixM, hResponse, fCurrentEfficiency, l, j, s, u) | |
850 | * covTerm[r][u][s]; | |
851 | } | |
852 | ||
853 | cov2[k][l] += fCurrentESD->GetBinContent(i+1) * fCurrentESD->GetBinContent(j+1) * tmpCov; | |
854 | } | |
855 | } | |
856 | ||
857 | printf("Cov2 finished\n"); | |
858 | ||
859 | for (Int_t i=1; i<=xBins; i++) | |
860 | for (Int_t j=1; j<=yBins; j++) | |
861 | cov->SetBinContent(i, j, cov1[i-1][j-1] + cov2[i-1][j-1]); | |
862 | ||
863 | new TCanvas; | |
864 | cov->Draw("COLZ");*/ | |
865 | } | |
866 | ||
867 | //____________________________________________________________________ | |
868 | Double_t AliUnfolding::RegularizationPol0(TVectorD& params) | |
869 | { | |
870 | // homogenity term for minuit fitting | |
871 | // pure function of the parameters | |
872 | // prefers constant function (pol0) | |
9e065ad2 | 873 | // |
874 | // Does not take into account efficiency | |
19442b86 | 875 | Double_t chi2 = 0; |
876 | ||
877 | for (Int_t i=1+fgSkipBinsBegin; i<fgMaxParams; ++i) | |
878 | { | |
9e065ad2 | 879 | Double_t right = params[i] / fgUnfoldedAxis->GetBinWidth(i+1); |
880 | Double_t left = params[i-1] / fgUnfoldedAxis->GetBinWidth(i); | |
19442b86 | 881 | |
95e970ca | 882 | if (left != 0) |
19442b86 | 883 | { |
95e970ca | 884 | Double_t diff = (right - left); |
9e065ad2 | 885 | chi2 += diff * diff / left / ((fgUnfoldedAxis->GetBinWidth(i+1) + fgUnfoldedAxis->GetBinWidth(i)) / 2); |
19442b86 | 886 | } |
887 | } | |
888 | ||
889 | return chi2 / 100.0; | |
890 | } | |
891 | ||
892 | //____________________________________________________________________ | |
893 | Double_t AliUnfolding::RegularizationPol1(TVectorD& params) | |
894 | { | |
895 | // homogenity term for minuit fitting | |
896 | // pure function of the parameters | |
897 | // prefers linear function (pol1) | |
9e065ad2 | 898 | // |
899 | // Does not take into account efficiency | |
19442b86 | 900 | Double_t chi2 = 0; |
901 | ||
902 | for (Int_t i=2+fgSkipBinsBegin; i<fgMaxParams; ++i) | |
903 | { | |
904 | if (params[i-1] == 0) | |
905 | continue; | |
906 | ||
9e065ad2 | 907 | Double_t right = params[i] / fgUnfoldedAxis->GetBinWidth(i+1); |
908 | Double_t middle = params[i-1] / fgUnfoldedAxis->GetBinWidth(i); | |
909 | Double_t left = params[i-2] / fgUnfoldedAxis->GetBinWidth(i-1); | |
19442b86 | 910 | |
9e065ad2 | 911 | Double_t der1 = (right - middle) / ((fgUnfoldedAxis->GetBinWidth(i+1) + fgUnfoldedAxis->GetBinWidth(i)) / 2); |
912 | Double_t der2 = (middle - left) / ((fgUnfoldedAxis->GetBinWidth(i) + fgUnfoldedAxis->GetBinWidth(i-1)) / 2); | |
19442b86 | 913 | |
95e970ca | 914 | //Double_t diff = (der1 - der2) / middle; |
915 | //chi2 += diff * diff; | |
9e065ad2 | 916 | chi2 += (der1 - der2) * (der1 - der2) / middle * fgUnfoldedAxis->GetBinWidth(i); |
19442b86 | 917 | } |
918 | ||
919 | return chi2; | |
920 | } | |
921 | ||
922 | //____________________________________________________________________ | |
923 | Double_t AliUnfolding::RegularizationLog(TVectorD& params) | |
924 | { | |
925 | // homogenity term for minuit fitting | |
926 | // pure function of the parameters | |
9e065ad2 | 927 | // prefers logarithmic function (log) |
928 | // | |
929 | // Does not take into account efficiency | |
19442b86 | 930 | |
931 | Double_t chi2 = 0; | |
932 | ||
933 | for (Int_t i=2+fgSkipBinsBegin; i<fgMaxParams; ++i) | |
934 | { | |
95e970ca | 935 | if (params[i-1] == 0 || params[i] == 0 || params[i-2] == 0) |
936 | continue; | |
19442b86 | 937 | |
9e065ad2 | 938 | Double_t right = log(params[i] / fgUnfoldedAxis->GetBinWidth(i+1)); |
939 | Double_t middle = log(params[i-1] / fgUnfoldedAxis->GetBinWidth(i)); | |
940 | Double_t left = log(params[i-2] / fgUnfoldedAxis->GetBinWidth(i-1)); | |
95e970ca | 941 | |
9e065ad2 | 942 | Double_t der1 = (right - middle) / ((fgUnfoldedAxis->GetBinWidth(i+1) + fgUnfoldedAxis->GetBinWidth(i)) / 2); |
943 | Double_t der2 = (middle - left) / ((fgUnfoldedAxis->GetBinWidth(i) + fgUnfoldedAxis->GetBinWidth(i-1)) / 2); | |
95e970ca | 944 | |
945 | //Double_t error = 1. / params[i] + 4. / params[i-1] + 1. / params[i-2]; | |
19442b86 | 946 | |
95e970ca | 947 | //if (fgCallCount == 0) |
948 | // Printf("%d %f %f", i, (der1 - der2) * (der1 - der2), error); | |
949 | chi2 += (der1 - der2) * (der1 - der2);// / error; | |
19442b86 | 950 | } |
951 | ||
95e970ca | 952 | return chi2; |
19442b86 | 953 | } |
954 | ||
955 | //____________________________________________________________________ | |
956 | Double_t AliUnfolding::RegularizationTotalCurvature(TVectorD& params) | |
957 | { | |
958 | // homogenity term for minuit fitting | |
959 | // pure function of the parameters | |
960 | // minimizes the total curvature (from Unfolding Methods In High-Energy Physics Experiments, | |
961 | // V. Blobel (Hamburg U.) . DESY 84/118, Dec 1984. 40pp. | |
9e065ad2 | 962 | // |
963 | // Does not take into account efficiency | |
19442b86 | 964 | |
965 | Double_t chi2 = 0; | |
966 | ||
967 | for (Int_t i=2+fgSkipBinsBegin; i<fgMaxParams; ++i) | |
968 | { | |
969 | Double_t right = params[i]; | |
970 | Double_t middle = params[i-1]; | |
971 | Double_t left = params[i-2]; | |
972 | ||
973 | Double_t der1 = (right - middle); | |
974 | Double_t der2 = (middle - left); | |
975 | ||
976 | Double_t diff = (der1 - der2); | |
977 | ||
978 | chi2 += diff * diff; | |
979 | } | |
980 | ||
981 | return chi2 * 1e4; | |
982 | } | |
983 | ||
984 | //____________________________________________________________________ | |
985 | Double_t AliUnfolding::RegularizationEntropy(TVectorD& params) | |
986 | { | |
987 | // homogenity term for minuit fitting | |
988 | // pure function of the parameters | |
989 | // calculates entropy, from | |
990 | // The method of reduced cross-entropy (M. Schmelling 1993) | |
9e065ad2 | 991 | // |
992 | // Does not take into account efficiency | |
19442b86 | 993 | |
994 | Double_t paramSum = 0; | |
995 | ||
996 | for (Int_t i=fgSkipBinsBegin; i<fgMaxParams; ++i) | |
997 | paramSum += params[i]; | |
998 | ||
999 | Double_t chi2 = 0; | |
1000 | for (Int_t i=fgSkipBinsBegin; i<fgMaxParams; ++i) | |
1001 | { | |
95e970ca | 1002 | Double_t tmp = params[i] / paramSum; |
1003 | //Double_t tmp = params[i]; | |
19442b86 | 1004 | if (tmp > 0 && (*fgEntropyAPriori)[i] > 0) |
1005 | { | |
1006 | chi2 += tmp * TMath::Log(tmp / (*fgEntropyAPriori)[i]); | |
1007 | } | |
95e970ca | 1008 | else |
1009 | chi2 += 100; | |
1010 | } | |
1011 | ||
1012 | return -chi2; | |
1013 | } | |
1014 | ||
1015 | //____________________________________________________________________ | |
1016 | Double_t AliUnfolding::RegularizationRatio(TVectorD& params) | |
1017 | { | |
1018 | // homogenity term for minuit fitting | |
1019 | // pure function of the parameters | |
9e065ad2 | 1020 | // |
1021 | // Does not take into account efficiency | |
95e970ca | 1022 | |
1023 | Double_t chi2 = 0; | |
1024 | ||
1025 | for (Int_t i=5+fgSkipBinsBegin; i<fgMaxParams; ++i) | |
1026 | { | |
1027 | if (params[i-1] == 0 || params[i] == 0) | |
1028 | continue; | |
1029 | ||
9e065ad2 | 1030 | Double_t right = params[i] / fgUnfoldedAxis->GetBinWidth(i+1); |
1031 | Double_t middle = params[i-1] / fgUnfoldedAxis->GetBinWidth(i); | |
1032 | Double_t left = params[i-2] / fgUnfoldedAxis->GetBinWidth(i-1); | |
1033 | Double_t left2 = params[i-3] / fgUnfoldedAxis->GetBinWidth(i-2); | |
1034 | Double_t left3 = params[i-4] / fgUnfoldedAxis->GetBinWidth(i-3); | |
1035 | Double_t left4 = params[i-5] / fgUnfoldedAxis->GetBinWidth(i-4); | |
95e970ca | 1036 | |
1037 | //Double_t diff = left / middle - middle / right; | |
1038 | //Double_t diff = 2 * left / middle - middle / right - left2 / left; | |
1039 | Double_t diff = 4 * left2 / left - middle / right - left / middle - left3 / left2 - left4 / left3; | |
1040 | ||
1041 | chi2 += diff * diff;// / middle; | |
19442b86 | 1042 | } |
1043 | ||
95e970ca | 1044 | return chi2; |
19442b86 | 1045 | } |
1046 | ||
9e065ad2 | 1047 | //____________________________________________________________________ |
1048 | Double_t AliUnfolding::RegularizationPowerLaw(TVectorD& params) | |
1049 | { | |
1050 | // homogenity term for minuit fitting | |
1051 | // pure function of the parameters | |
1052 | // prefers power law with n = -5 | |
1053 | // | |
1054 | // Does not take into account efficiency | |
1055 | ||
1056 | Double_t chi2 = 0; | |
1057 | ||
1058 | Double_t right = 0.; | |
1059 | Double_t middle = 0.; | |
1060 | Double_t left = 0.; | |
1061 | ||
1062 | for (Int_t i=2+fgSkipBinsBegin; i<fgMaxParams; ++i) | |
1063 | { | |
1064 | if (params[i] < 1e-8 || params[i-1] < 1e-8 || params[i-2] < 1e-8) | |
1065 | continue; | |
1066 | ||
1067 | if (fgUnfoldedAxis->GetBinWidth(i+1) < 1e-8 || fgUnfoldedAxis->GetBinWidth(i) < 1e-8 || fgUnfoldedAxis->GetBinWidth(i-1) < 1e-8) | |
1068 | continue; | |
1069 | ||
1070 | middle = TMath::Power(params[i-1] / fgUnfoldedAxis->GetBinWidth(i),fgPowern); | |
1071 | ||
1072 | if(middle>0) { | |
1073 | right = TMath::Power(params[i] / fgUnfoldedAxis->GetBinWidth(i),fgPowern)/middle; | |
1074 | ||
1075 | left = TMath::Power(params[i-2] / fgUnfoldedAxis->GetBinWidth(i-1),fgPowern)/middle; | |
1076 | ||
1077 | middle = 1.; | |
1078 | ||
1079 | Double_t der1 = (right - middle) / ((fgUnfoldedAxis->GetBinWidth(i+1) + fgUnfoldedAxis->GetBinWidth(i)) / 2); | |
1080 | Double_t der2 = (middle - left) / ((fgUnfoldedAxis->GetBinWidth(i-1) + fgUnfoldedAxis->GetBinWidth(i-2)) / 2); | |
1081 | ||
1082 | chi2 += (der1 - der2) * (der1 - der2)/ ( fgUnfoldedAxis->GetBinWidth(i)/2. + fgUnfoldedAxis->GetBinWidth(i-1) + fgUnfoldedAxis->GetBinWidth(i-2)/2.)/( fgUnfoldedAxis->GetBinWidth(i)/2. + fgUnfoldedAxis->GetBinWidth(i-1) + fgUnfoldedAxis->GetBinWidth(i-2)/2.);// / error; | |
1083 | // printf("i: %d chi2 = %f\n",i,chi2); | |
1084 | } | |
1085 | ||
1086 | } | |
1087 | ||
1088 | return chi2; | |
1089 | } | |
1090 | ||
1091 | //____________________________________________________________________ | |
1092 | Double_t AliUnfolding::RegularizationLogLog(TVectorD& params) | |
1093 | { | |
1094 | // homogenity term for minuit fitting | |
1095 | // pure function of the parameters | |
1096 | // prefers a powerlaw (linear on a log-log scale) | |
1097 | // | |
1098 | // The calculation takes into account the efficiencies | |
1099 | ||
1100 | Double_t chi2 = 0; | |
1101 | ||
1102 | for (Int_t i=2+fgSkipBinsBegin; i<fgMaxParams; ++i) | |
1103 | { | |
1104 | if (params[i-1] == 0 || params[i] == 0 || params[i-2] == 0) | |
1105 | continue; | |
1106 | if ((*fgEfficiency)(i-1) == 0 || (*fgEfficiency)(i) == 0 || (*fgEfficiency)(i-2) == 0) | |
1107 | continue; | |
1108 | ||
1109 | ||
1110 | Double_t right = log(params[i] / (*fgEfficiency)(i) / fgUnfoldedAxis->GetBinWidth(i)); | |
1111 | Double_t middle = log(params[i-1] / (*fgEfficiency)(i-1) / fgUnfoldedAxis->GetBinWidth(i-1)); | |
1112 | Double_t left = log(params[i-2] / (*fgEfficiency)(i-2) / fgUnfoldedAxis->GetBinWidth(i-2)); | |
1113 | ||
1114 | Double_t der1 = (right - middle) / ( log(fgUnfoldedAxis->GetBinCenter(i+1)) - log(fgUnfoldedAxis->GetBinCenter(i)) ); | |
1115 | Double_t der2 = (middle - left) /( log(fgUnfoldedAxis->GetBinCenter(i)) - log(fgUnfoldedAxis->GetBinCenter(i-1)) ); | |
1116 | ||
1117 | double tmp = (log(fgUnfoldedAxis->GetBinCenter(i+1)) - log(fgUnfoldedAxis->GetBinCenter(i-1)))/2.; | |
1118 | Double_t dder = (der1-der2) / tmp; | |
1119 | ||
1120 | chi2 += dder * dder; | |
1121 | } | |
1122 | ||
1123 | return chi2; | |
1124 | } | |
1125 | ||
1126 | ||
1127 | ||
19442b86 | 1128 | //____________________________________________________________________ |
1129 | void AliUnfolding::Chi2Function(Int_t&, Double_t*, Double_t& chi2, Double_t *params, Int_t) | |
1130 | { | |
1131 | // | |
1132 | // fit function for minuit | |
1133 | // does: (m - Ad)W(m - Ad) where m = measured, A correlation matrix, d = guess, W = covariance matrix | |
1134 | // | |
95e970ca | 1135 | |
1136 | // TODO use static members for the variables here to speed up processing (no construction/deconstruction) | |
19442b86 | 1137 | |
9e065ad2 | 1138 | // d = guess |
95e970ca | 1139 | TVectorD paramsVector(fgMaxParams); |
19442b86 | 1140 | for (Int_t i=0; i<fgMaxParams; ++i) |
1141 | paramsVector[i] = params[i] * params[i]; | |
1142 | ||
1143 | // calculate penalty factor | |
1144 | Double_t penaltyVal = 0; | |
9e065ad2 | 1145 | |
19442b86 | 1146 | switch (fgRegularizationType) |
1147 | { | |
1148 | case kNone: break; | |
1149 | case kPol0: penaltyVal = RegularizationPol0(paramsVector); break; | |
1150 | case kPol1: penaltyVal = RegularizationPol1(paramsVector); break; | |
1151 | case kCurvature: penaltyVal = RegularizationTotalCurvature(paramsVector); break; | |
1152 | case kEntropy: penaltyVal = RegularizationEntropy(paramsVector); break; | |
1153 | case kLog: penaltyVal = RegularizationLog(paramsVector); break; | |
95e970ca | 1154 | case kRatio: penaltyVal = RegularizationRatio(paramsVector); break; |
9e065ad2 | 1155 | case kPowerLaw: penaltyVal = RegularizationPowerLaw(paramsVector); break; |
1156 | case kLogLog: penaltyVal = RegularizationLogLog(paramsVector); break; | |
19442b86 | 1157 | } |
1158 | ||
9e065ad2 | 1159 | penaltyVal *= fgRegularizationWeight; //beta*PU |
19442b86 | 1160 | |
1161 | // Ad | |
1162 | TVectorD measGuessVector(fgMaxInput); | |
1163 | measGuessVector = (*fgCorrelationMatrix) * paramsVector; | |
1164 | ||
1165 | // Ad - m | |
1166 | measGuessVector -= (*fgCurrentESDVector); | |
95e970ca | 1167 | |
1168 | #if 0 | |
1169 | // new error calcuation using error on the guess | |
1170 | ||
1171 | // error from guess | |
1172 | TVectorD errorGuessVector(fgMaxInput); | |
1173 | //errorGuessVector = (*fgCorrelationMatrixSquared) * paramsVector; | |
1174 | errorGuessVector = (*fgCorrelationMatrix) * paramsVector; | |
19442b86 | 1175 | |
95e970ca | 1176 | Double_t chi2FromFit = 0; |
1177 | for (Int_t i=0; i<fgMaxInput; ++i) | |
1178 | { | |
1179 | Float_t error = 1; | |
1180 | if (errorGuessVector(i) > 0) | |
1181 | error = errorGuessVector(i); | |
1182 | chi2FromFit += measGuessVector(i) * measGuessVector(i) / error; | |
1183 | } | |
19442b86 | 1184 | |
95e970ca | 1185 | #else |
1186 | // old error calcuation using the error on the measured | |
19442b86 | 1187 | TVectorD copy(measGuessVector); |
1188 | ||
1189 | // (Ad - m) W | |
1190 | // this step can be optimized because currently only the diagonal elements of fgCorrelationCovarianceMatrix are used | |
1191 | // normal way is like this: | |
1192 | // measGuessVector *= (*fgCorrelationCovarianceMatrix); | |
1193 | // optimized way like this: | |
1194 | for (Int_t i=0; i<fgMaxInput; ++i) | |
1195 | measGuessVector[i] *= (*fgCorrelationCovarianceMatrix)(i, i); | |
1196 | ||
19442b86 | 1197 | |
95e970ca | 1198 | if (fgSkipBin0InChi2) |
1199 | measGuessVector[0] = 0; | |
1200 | ||
19442b86 | 1201 | // (Ad - m) W (Ad - m) |
1202 | // the factor 1e6 prevents that a very small number (measGuessVector[i]) is multiplied with a very | |
95e970ca | 1203 | // big number ((*fgCorrelationCovarianceMatrix)(i, i)) (see UnfoldWithMinuit) |
19442b86 | 1204 | Double_t chi2FromFit = measGuessVector * copy * 1e6; |
95e970ca | 1205 | #endif |
19442b86 | 1206 | |
95e970ca | 1207 | Double_t notFoundEventsConstraint = 0; |
1208 | Double_t currentNotFoundEvents = 0; | |
1209 | Double_t errorNotFoundEvents = 0; | |
1210 | ||
1211 | if (fgNotFoundEvents > 0) | |
1212 | { | |
1213 | for (Int_t i=0; i<fgMaxParams; ++i) | |
1214 | { | |
1215 | Double_t eff = (1.0 / (*fgEfficiency)(i) - 1); | |
1216 | if (i == 0) | |
1217 | eff = (1.0 / params[fgMaxParams] - 1); | |
1218 | currentNotFoundEvents += eff * paramsVector(i); | |
1219 | errorNotFoundEvents += eff * eff * paramsVector(i); // error due to guess (paramsVector) | |
1220 | if (i <= 3) | |
1221 | errorNotFoundEvents += (eff * 0.03) * (eff * 0.03) * paramsVector(i) * paramsVector(i); // error on eff | |
9e065ad2 | 1222 | // if ((fgCallCount % 10000) == 0) |
1223 | //Printf("%d %f %f %f", i, (*fgEfficiency)(i), paramsVector(i), currentNotFoundEvents); | |
95e970ca | 1224 | } |
1225 | errorNotFoundEvents += fgNotFoundEvents; | |
1226 | // TODO add error on background, background estimate | |
1227 | ||
1228 | notFoundEventsConstraint = (currentNotFoundEvents - fgNotFoundEvents) * (currentNotFoundEvents - fgNotFoundEvents) / errorNotFoundEvents; | |
1229 | } | |
1230 | ||
1231 | Float_t avg = 0; | |
1232 | Float_t sum = 0; | |
1233 | Float_t currentMult = 0; | |
1234 | // try to match dn/deta | |
1235 | for (Int_t i=0; i<fgMaxParams; ++i) | |
1236 | { | |
1237 | avg += paramsVector(i) * currentMult; | |
1238 | sum += paramsVector(i); | |
9e065ad2 | 1239 | currentMult += fgUnfoldedAxis->GetBinWidth(i); |
95e970ca | 1240 | } |
1241 | avg /= sum; | |
1242 | Float_t chi2Avg = 0; //(avg - 3.73) * (avg - 3.73) * 100; | |
19442b86 | 1243 | |
95e970ca | 1244 | chi2 = chi2FromFit + penaltyVal + notFoundEventsConstraint + chi2Avg; |
9e065ad2 | 1245 | |
95e970ca | 1246 | if ((fgCallCount++ % 1000) == 0) |
1247 | { | |
9e065ad2 | 1248 | |
1249 | Printf("AliUnfolding::Chi2Function: Iteration %d (ev %d %d +- %f) (%f) (%f): %f %f %f %f --> %f", fgCallCount-1, (Int_t) fgNotFoundEvents, (Int_t) currentNotFoundEvents, TMath::Sqrt(errorNotFoundEvents), params[fgMaxParams-1], avg, chi2FromFit, penaltyVal, notFoundEventsConstraint, chi2Avg, chi2); | |
1250 | ||
95e970ca | 1251 | //for (Int_t i=0; i<fgMaxInput; ++i) |
1252 | // Printf("%d: %f", i, measGuessVector(i) * copy(i) * 1e6); | |
1253 | } | |
9e065ad2 | 1254 | |
1255 | fChi2FromFit = chi2FromFit; | |
1256 | fPenaltyVal = penaltyVal; | |
19442b86 | 1257 | } |
1258 | ||
1259 | //____________________________________________________________________ | |
9e065ad2 | 1260 | void AliUnfolding::MakePads() { |
1261 | TPad *presult = new TPad("presult","result",0,0.4,1,1); | |
1262 | presult->SetNumber(1); | |
1263 | presult->Draw(); | |
1264 | presult->SetLogy(); | |
1265 | TPad *pres = new TPad("pres","residuals",0,0.2,1,0.4); | |
1266 | pres->SetNumber(2); | |
1267 | pres->Draw(); | |
1268 | TPad *ppen = new TPad("ppen","penalty",0,0.0,1,0.2); | |
1269 | ppen->SetNumber(3); | |
1270 | ppen->Draw(); | |
1271 | ||
1272 | } | |
1273 | //____________________________________________________________________ | |
1274 | void AliUnfolding::DrawResults(TH2* correlation, TH1* efficiency, TH1* measured, TH1* initialConditions, TCanvas *canv, Int_t reuseHists,TH1 *unfolded) | |
1275 | { | |
1276 | // Draw histograms of | |
1277 | // - Result folded with response | |
1278 | // - Penalty factors | |
1279 | // - Chisquare contributions | |
1280 | // (Useful for debugging/sanity checks and the interactive unfolder) | |
1281 | // | |
1282 | // If a canvas pointer is given (canv != 0), it will be used for all | |
1283 | // plots; 3 pads are made if needed. | |
1284 | ||
1285 | ||
1286 | Int_t blankCanvas = 0; | |
1287 | TVirtualPad *presult = 0; | |
1288 | TVirtualPad *pres = 0; | |
1289 | TVirtualPad *ppen = 0; | |
1290 | ||
1291 | if (canv) { | |
1292 | canv->cd(); | |
1293 | presult = canv->GetPad(1); | |
1294 | pres = canv->GetPad(2); | |
1295 | ppen = canv->GetPad(3); | |
1296 | if (presult == 0 || pres == 0 || ppen == 0) { | |
1297 | canv->Clear(); | |
1298 | MakePads(); | |
1299 | blankCanvas = 1; | |
1300 | presult = canv->GetPad(1); | |
1301 | pres = canv->GetPad(2); | |
1302 | ppen = canv->GetPad(3); | |
1303 | } | |
1304 | } | |
1305 | else { | |
1306 | presult = new TCanvas; | |
1307 | pres = new TCanvas; | |
1308 | ppen = new TCanvas; | |
1309 | } | |
1310 | ||
1311 | ||
1312 | if (fgMaxInput == -1) | |
1313 | { | |
1314 | Printf("AliUnfolding::Unfold: WARNING. Number of measured bins not set with SetNbins. Using number of bins in measured distribution"); | |
1315 | fgMaxInput = measured->GetNbinsX(); | |
1316 | } | |
1317 | if (fgMaxParams == -1) | |
1318 | { | |
1319 | Printf("AliUnfolding::Unfold: WARNING. Number of unfolded bins not set with SetNbins. Using number of bins in measured distribution"); | |
1320 | fgMaxParams = initialConditions->GetNbinsX(); | |
1321 | } | |
1322 | ||
1323 | if (fgOverflowBinLimit > 0) | |
1324 | CreateOverflowBin(correlation, measured); | |
1325 | ||
1326 | // Uses Minuit methods | |
1327 | ||
1328 | SetStaticVariables(correlation, measured, efficiency); | |
1329 | ||
1330 | Double_t* params = new Double_t[fgMaxParams+1]; | |
1331 | for (Int_t i=0; i<fgMaxParams; ++i) | |
1332 | { | |
1333 | params[i] = initialConditions->GetBinContent(i+1) * efficiency->GetBinContent(i+1); | |
1334 | ||
1335 | Bool_t fix = kFALSE; | |
1336 | if (params[i] < 0) | |
1337 | { | |
1338 | fix = kTRUE; | |
1339 | params[i] = -params[i]; | |
1340 | } | |
1341 | params[i]=TMath::Sqrt(params[i]); | |
1342 | ||
1343 | //cout << "params[" << i << "] " << params[i] << endl; | |
1344 | ||
1345 | } | |
1346 | ||
1347 | Double_t chi2; | |
1348 | Int_t dummy; | |
1349 | ||
1350 | //fgPrintChi2Details = kTRUE; | |
1351 | fgCallCount = 0; // To make sure that Chi2Function prints the components | |
1352 | Chi2Function(dummy, 0, chi2, params, 0); | |
1353 | ||
1354 | presult->cd(); | |
03650114 | 1355 | TH1 *meas2 = (TH1*)measured->Clone("meas2"); |
1356 | meas2->SetTitle("meas2"); | |
1357 | meas2->SetName("meas2"); | |
9e065ad2 | 1358 | meas2->SetLineColor(1); |
1359 | meas2->SetLineWidth(2); | |
1360 | meas2->SetMarkerColor(meas2->GetLineColor()); | |
1361 | meas2->SetMarkerStyle(20); | |
1362 | Float_t scale = unfolded->GetXaxis()->GetBinWidth(1)/meas2->GetXaxis()->GetBinWidth(1); | |
1363 | meas2->Scale(scale); | |
1364 | if (blankCanvas) | |
1365 | meas2->DrawCopy(); | |
1366 | else | |
1367 | meas2->DrawCopy("same"); | |
1368 | //meas2->GetXaxis()->SetLimits(0,fgMaxInput); | |
1369 | meas2->SetBit(kCannotPick); | |
1370 | DrawGuess(params, presult, pres, ppen, reuseHists,unfolded); | |
2d99332c | 1371 | delete [] params; |
9e065ad2 | 1372 | } |
1373 | //____________________________________________________________________ | |
1374 | void AliUnfolding::RedrawInteractive() { | |
1375 | // | |
1376 | // Helper function for interactive unfolding | |
1377 | // | |
1378 | DrawResults(fghCorrelation,fghEfficiency,fghMeasured,fghUnfolded,fgCanvas,1,fghUnfolded); | |
1379 | } | |
1380 | //____________________________________________________________________ | |
1381 | void AliUnfolding::InteractiveUnfold(TH2* correlation, TH1* efficiency, TH1* measured, TH1* initialConditions) | |
1382 | { | |
1383 | // | |
1384 | // Function to do interactive unfolding | |
1385 | // A canvas is drawn with the unfolding result | |
1386 | // Change the histogram with your mouse and all histograms | |
1387 | // will be updated automatically | |
1388 | ||
1389 | fgCanvas = new TCanvas("UnfoldingCanvas","Interactive unfolding",500,800); | |
1390 | fgCanvas->cd(); | |
1391 | ||
1392 | MakePads(); | |
1393 | ||
1394 | if (fghUnfolded) { | |
1395 | delete fghUnfolded; fghUnfolded = 0; | |
1396 | } | |
1397 | ||
1398 | gROOT->SetEditHistograms(kTRUE); | |
1399 | ||
03650114 | 1400 | fghUnfolded = new TH1F("AliUnfoldingfghUnfolded","Unfolded result (Interactive unfolder",efficiency->GetNbinsX(),efficiency->GetXaxis()->GetXmin(),efficiency->GetXaxis()->GetXmax()); |
9e065ad2 | 1401 | |
1402 | fghCorrelation = correlation; | |
1403 | fghEfficiency = efficiency; | |
1404 | fghMeasured = measured; | |
1405 | ||
03650114 | 1406 | if(fgMinuitMaxIterations>0) |
1407 | UnfoldWithMinuit(correlation,efficiency,measured,initialConditions,fghUnfolded,kFALSE); | |
1408 | else | |
1409 | fghUnfolded = initialConditions; | |
1410 | ||
1411 | fghUnfolded->SetLineColor(2); | |
1412 | fghUnfolded->SetMarkerColor(2); | |
1413 | fghUnfolded->SetLineWidth(2); | |
1414 | ||
9e065ad2 | 1415 | |
1416 | fgCanvas->cd(1); | |
1417 | fghUnfolded->Draw(); | |
1418 | DrawResults(correlation,efficiency,measured,fghUnfolded,fgCanvas,kFALSE,fghUnfolded); | |
1419 | ||
1420 | TExec *execRedraw = new TExec("redraw","AliUnfolding::RedrawInteractive()"); | |
1421 | fghUnfolded->GetListOfFunctions()->Add(execRedraw); | |
1422 | } | |
1423 | //____________________________________________________________________ | |
1424 | void AliUnfolding::DrawGuess(Double_t *params, TVirtualPad *pfolded, TVirtualPad *pres, TVirtualPad *ppen, Int_t reuseHists,TH1* unfolded) | |
19442b86 | 1425 | { |
1426 | // | |
1427 | // draws residuals of solution suggested by params and effect of regularization | |
1428 | // | |
1429 | ||
9e065ad2 | 1430 | if (pfolded == 0) |
1431 | pfolded = new TCanvas; | |
1432 | if (ppen == 0) | |
1433 | ppen = new TCanvas; | |
1434 | if (pres == 0) | |
1435 | pres = new TCanvas; | |
1436 | ||
19442b86 | 1437 | // d |
95e970ca | 1438 | TVectorD paramsVector(fgMaxParams); |
19442b86 | 1439 | for (Int_t i=0; i<fgMaxParams; ++i) |
1440 | paramsVector[i] = params[i] * params[i]; | |
1441 | ||
1442 | // Ad | |
1443 | TVectorD measGuessVector(fgMaxInput); | |
1444 | measGuessVector = (*fgCorrelationMatrix) * paramsVector; | |
1445 | ||
9e065ad2 | 1446 | TH1* folded = 0; |
1447 | if (reuseHists) | |
1448 | folded = dynamic_cast<TH1*>(gROOT->FindObject("__hfolded")); | |
1449 | if (!reuseHists || folded == 0) { | |
1450 | if (fgMeasuredAxis->GetXbins()->GetArray()) // variable bins | |
1451 | folded = new TH1F("__hfolded","Folded histo from AliUnfolding",fgMeasuredAxis->GetNbins(),fgMeasuredAxis->GetXbins()->GetArray()); | |
1452 | else | |
1453 | folded = new TH1F("__hfolded","Folded histo from AliUnfolding",fgMeasuredAxis->GetNbins(),fgMeasuredAxis->GetXmin(),fgMeasuredAxis->GetXmax()); | |
1454 | } | |
1455 | ||
1456 | folded->SetBit(kCannotPick); | |
1457 | folded->SetLineColor(4); | |
1458 | folded->SetLineWidth(2); | |
1459 | ||
1460 | for (Int_t ibin =0; ibin < fgMaxInput; ibin++) | |
1461 | folded->SetBinContent(ibin+1, measGuessVector[ibin]); | |
1462 | ||
1463 | Float_t scale = unfolded->GetXaxis()->GetBinWidth(1)/folded->GetXaxis()->GetBinWidth(1); | |
1464 | folded->Scale(scale); | |
1465 | ||
1466 | pfolded->cd(); | |
1467 | ||
1468 | folded->Draw("same"); | |
1469 | ||
19442b86 | 1470 | // Ad - m |
1471 | measGuessVector -= (*fgCurrentESDVector); | |
1472 | ||
1473 | TVectorD copy(measGuessVector); | |
19442b86 | 1474 | |
1475 | // (Ad - m) W | |
1476 | // this step can be optimized because currently only the diagonal elements of fgCorrelationCovarianceMatrix are used | |
1477 | // normal way is like this: | |
1478 | // measGuessVector *= (*fgCorrelationCovarianceMatrix); | |
1479 | // optimized way like this: | |
1480 | for (Int_t i=0; i<fgMaxInput; ++i) | |
1481 | measGuessVector[i] *= (*fgCorrelationCovarianceMatrix)(i, i); | |
1482 | ||
1483 | // (Ad - m) W (Ad - m) | |
1484 | // the factor 1e6 prevents that a very small number (measGuessVector[i]) is multiplied with a very | |
1485 | // big number ((*fgCorrelationCovarianceMatrix)(i, i)) (see ApplyMinuitFit) | |
1486 | //Double_t chi2FromFit = measGuessVector * copy * 1e6; | |
1487 | ||
1488 | // draw residuals | |
9e065ad2 | 1489 | // Double_t pTarray[fgMaxParams+1]; |
1490 | // for(int i=0; i<fgMaxParams; i++) { | |
1491 | // pTarray[i] = fgUnfoldedAxis->GetBinCenter(i)-0.5*fgUnfoldedAxis->GetBinWidth(i); | |
1492 | // } | |
1493 | // pTarray[fgMaxParams] = fgUnfoldedAxis->GetBinCenter(fgMaxParams-1)+0.5*fgUnfoldedAxis->GetBinWidth(fgMaxParams-1); | |
1494 | // TH1* residuals = new TH1F("residuals", "residuals", fgMaxParams,pTarray); | |
1495 | // TH1* residuals = new TH1F("residuals", "residuals", fgMaxInput, -0.5, fgMaxInput - 0.5); | |
1496 | // for (Int_t i=0; i<fgMaxInput; ++i) | |
1497 | // residuals->SetBinContent(i+1, measGuessVector(i) * copy(i) * 1e6);7 | |
1498 | TH1* residuals = GetResidualsPlot(params); | |
1499 | residuals->GetXaxis()->SetTitleSize(0.06); | |
1500 | residuals->GetXaxis()->SetTitleOffset(0.7); | |
1501 | residuals->GetXaxis()->SetLabelSize(0.07); | |
1502 | residuals->GetYaxis()->SetTitleSize(0.08); | |
1503 | residuals->GetYaxis()->SetTitleOffset(0.5); | |
1504 | residuals->GetYaxis()->SetLabelSize(0.06); | |
1505 | pres->cd(); residuals->DrawCopy(); gPad->SetLogy(); | |
1506 | ||
19442b86 | 1507 | |
1508 | // draw penalty | |
95e970ca | 1509 | TH1* penalty = GetPenaltyPlot(params); |
9e065ad2 | 1510 | penalty->GetXaxis()->SetTitleSize(0.06); |
1511 | penalty->GetXaxis()->SetTitleOffset(0.7); | |
1512 | penalty->GetXaxis()->SetLabelSize(0.07); | |
1513 | penalty->GetYaxis()->SetTitleSize(0.08); | |
1514 | penalty->GetYaxis()->SetTitleOffset(0.5); | |
1515 | penalty->GetYaxis()->SetLabelSize(0.06); | |
1516 | ppen->cd(); penalty->DrawCopy(); gPad->SetLogy(); | |
1517 | } | |
1518 | ||
1519 | //____________________________________________________________________ | |
1520 | TH1* AliUnfolding::GetResidualsPlot(TH1* corrected) | |
1521 | { | |
1522 | // | |
1523 | // MvL: THIS MUST BE INCORRECT. | |
1524 | // Need heff to calculate params from TH1 'corrected' | |
1525 | // | |
1526 | ||
1527 | // | |
1528 | // fill residuals histogram of solution suggested by params and effect of regularization | |
1529 | // | |
1530 | ||
1531 | Double_t* params = new Double_t[fgMaxParams]; | |
b9b1eb8a | 1532 | for (Int_t i=0; i<fgMaxParams; i++) |
1533 | params[i] = 0; | |
1534 | ||
9e065ad2 | 1535 | for (Int_t i=0; i<TMath::Min(fgMaxParams, corrected->GetNbinsX()); i++) |
3a44f1b9 | 1536 | params[i] = TMath::Sqrt(TMath::Abs(corrected->GetBinContent(i+1)*(*fgEfficiency)(i))); |
9e065ad2 | 1537 | |
2d99332c | 1538 | TH1 * plot = GetResidualsPlot(params); |
1539 | delete [] params; | |
1540 | return plot; | |
9e065ad2 | 1541 | } |
1542 | ||
1543 | //____________________________________________________________________ | |
1544 | TH1* AliUnfolding::GetResidualsPlot(Double_t* params) | |
1545 | { | |
1546 | // | |
1547 | // fill residuals histogram of solution suggested by params and effect of regularization | |
1548 | // | |
1549 | ||
1550 | // d | |
1551 | TVectorD paramsVector(fgMaxParams); | |
1552 | for (Int_t i=0; i<fgMaxParams; ++i) | |
1553 | paramsVector[i] = params[i] * params[i]; | |
1554 | ||
1555 | // Ad | |
1556 | TVectorD measGuessVector(fgMaxInput); | |
1557 | measGuessVector = (*fgCorrelationMatrix) * paramsVector; | |
1558 | ||
1559 | // Ad - m | |
1560 | measGuessVector -= (*fgCurrentESDVector); | |
1561 | ||
1562 | TVectorD copy(measGuessVector); | |
1563 | ||
1564 | // (Ad - m) W | |
1565 | // this step can be optimized because currently only the diagonal elements of fgCorrelationCovarianceMatrix are used | |
1566 | // normal way is like this: | |
1567 | // measGuessVector *= (*fgCorrelationCovarianceMatrix); | |
1568 | // optimized way like this: | |
1569 | for (Int_t i=0; i<fgMaxInput; ++i) | |
1570 | measGuessVector[i] *= (*fgCorrelationCovarianceMatrix)(i, i); | |
1571 | ||
1572 | // (Ad - m) W (Ad - m) | |
1573 | // the factor 1e6 prevents that a very small number (measGuessVector[i]) is multiplied with a very | |
1574 | // big number ((*fgCorrelationCovarianceMatrix)(i, i)) (see ApplyMinuitFit) | |
1575 | //Double_t chi2FromFit = measGuessVector * copy * 1e6; | |
1576 | ||
1577 | // draw residuals | |
1578 | TH1* residuals = 0; | |
1579 | if (fgMeasuredAxis->GetXbins()->GetArray()) // variable bins | |
1580 | residuals = new TH1F("residuals", "residuals;unfolded pos;residual",fgMeasuredAxis->GetNbins(),fgMeasuredAxis->GetXbins()->GetArray()); | |
1581 | else | |
1582 | residuals = new TH1F("residuals", "residuals;unfolded pos;residual",fgMeasuredAxis->GetNbins(),fgMeasuredAxis->GetXmin(), fgMeasuredAxis->GetXmax()); | |
1583 | // TH1* residuals = new TH1F("residuals", "residuals", fgMaxInput, -0.5, fgMaxInput - 0.5); | |
1584 | ||
1585 | Double_t sumResiduals = 0.; | |
1586 | for (Int_t i=0; i<fgMaxInput; ++i) { | |
1587 | residuals->SetBinContent(i+1, measGuessVector(i) * copy(i) * 1e6); | |
1588 | sumResiduals += measGuessVector(i) * copy(i) * 1e6; | |
1589 | } | |
1590 | fAvgResidual = sumResiduals/(double)fgMaxInput; | |
1591 | ||
1592 | return residuals; | |
95e970ca | 1593 | } |
19442b86 | 1594 | |
95e970ca | 1595 | //____________________________________________________________________ |
1596 | TH1* AliUnfolding::GetPenaltyPlot(TH1* corrected) | |
1597 | { | |
1598 | // draws the penalty factors as function of multiplicity of the current selected regularization | |
19442b86 | 1599 | |
95e970ca | 1600 | Double_t* params = new Double_t[fgMaxParams]; |
b9b1eb8a | 1601 | for (Int_t i=0; i<fgMaxParams; i++) |
1602 | params[i] = 0; | |
1603 | ||
95e970ca | 1604 | for (Int_t i=0; i<TMath::Min(fgMaxParams, corrected->GetNbinsX()); i++) |
9e065ad2 | 1605 | params[i] = (*fgEfficiency)(i)*corrected->GetBinContent(i+1); |
95e970ca | 1606 | |
1607 | TH1* penalty = GetPenaltyPlot(params); | |
1608 | ||
1609 | delete[] params; | |
1610 | ||
1611 | return penalty; | |
1612 | } | |
1613 | ||
1614 | //____________________________________________________________________ | |
1615 | TH1* AliUnfolding::GetPenaltyPlot(Double_t* params) | |
1616 | { | |
1617 | // draws the penalty factors as function of multiplicity of the current selected regularization | |
1618 | ||
9e065ad2 | 1619 | //TH1* penalty = new TH1F("penalty", ";unfolded multiplicity;penalty factor", fgMaxParams, -0.5, fgMaxParams - 0.5); |
1620 | // TH1* penalty = new TH1F("penalty", ";unfolded pos;penalty factor", fgMaxParams, fgUnfoldedAxis->GetBinCenter(0)-0.5*fgUnfoldedAxis->GetBinWidth(0),fgUnfoldedAxis->GetBinCenter(fgMaxParams)+0.5*fgUnfoldedAxis->GetBinWidth(fgMaxParams) ); | |
1621 | ||
1622 | TH1* penalty = 0; | |
1623 | if (fgUnfoldedAxis->GetXbins()->GetArray()) | |
1624 | penalty = new TH1F("penalty", ";unfolded pos;penalty factor", fgUnfoldedAxis->GetNbins(),fgUnfoldedAxis->GetXbins()->GetArray()); | |
1625 | else | |
1626 | penalty = new TH1F("penalty", ";unfolded pos;penalty factor", fgUnfoldedAxis->GetNbins(),fgUnfoldedAxis->GetXmin(),fgUnfoldedAxis->GetXmax()); | |
95e970ca | 1627 | |
1628 | for (Int_t i=1+fgSkipBinsBegin; i<fgMaxParams; ++i) | |
19442b86 | 1629 | { |
95e970ca | 1630 | Double_t diff = 0; |
1631 | if (fgRegularizationType == kPol0) | |
1632 | { | |
9e065ad2 | 1633 | Double_t right = params[i] / fgUnfoldedAxis->GetBinWidth(i+1); |
1634 | Double_t left = params[i-1] / fgUnfoldedAxis->GetBinWidth(i); | |
19442b86 | 1635 | |
95e970ca | 1636 | if (left != 0) |
1637 | { | |
1638 | Double_t diffTmp = (right - left); | |
9e065ad2 | 1639 | diff = diffTmp * diffTmp / left / ((fgUnfoldedAxis->GetBinWidth(i+1) + fgUnfoldedAxis->GetBinWidth(i)) / 2) / 100; |
95e970ca | 1640 | } |
1641 | } | |
1642 | if (fgRegularizationType == kPol1 && i > 1+fgSkipBinsBegin) | |
1643 | { | |
1644 | if (params[i-1] == 0) | |
1645 | continue; | |
19442b86 | 1646 | |
9e065ad2 | 1647 | Double_t right = params[i] / fgUnfoldedAxis->GetBinWidth(i+1); |
1648 | Double_t middle = params[i-1] / fgUnfoldedAxis->GetBinWidth(i); | |
1649 | Double_t left = params[i-2] / fgUnfoldedAxis->GetBinWidth(i-1); | |
19442b86 | 1650 | |
9e065ad2 | 1651 | Double_t der1 = (right - middle) / ((fgUnfoldedAxis->GetBinWidth(i+1) + fgUnfoldedAxis->GetBinWidth(i)) / 2); |
1652 | Double_t der2 = (middle - left) / ((fgUnfoldedAxis->GetBinWidth(i) + fgUnfoldedAxis->GetBinWidth(i-1)) / 2); | |
95e970ca | 1653 | |
1654 | diff = (der1 - der2) * (der1 - der2) / middle; | |
1655 | } | |
9e065ad2 | 1656 | |
95e970ca | 1657 | if (fgRegularizationType == kLog && i > 1+fgSkipBinsBegin) |
1658 | { | |
1659 | if (params[i-1] == 0) | |
1660 | continue; | |
1661 | ||
1662 | Double_t right = log(params[i]); | |
1663 | Double_t middle = log(params[i-1]); | |
1664 | Double_t left = log(params[i-2]); | |
1665 | ||
1666 | Double_t der1 = (right - middle); | |
1667 | Double_t der2 = (middle - left); | |
1668 | ||
1669 | //Double_t error = 1. / params[i] + 4. / params[i-1] + 1. / params[i-2]; | |
1670 | //Printf("%d %f %f", i, (der1 - der2) * (der1 - der2), error); | |
1671 | ||
1672 | diff = (der1 - der2) * (der1 - der2);// / error; | |
1673 | } | |
9e065ad2 | 1674 | if (fgRegularizationType == kCurvature && i > 1+fgSkipBinsBegin) |
1675 | { | |
1676 | Double_t right = params[i]; // params are sqrt | |
1677 | Double_t middle = params[i-1]; | |
1678 | Double_t left = params[i-2]; | |
1679 | ||
1680 | Double_t der1 = (right - middle)/0.5/(fgUnfoldedAxis->GetBinWidth(i-1) + fgUnfoldedAxis->GetBinWidth(i)); | |
1681 | Double_t der2 = (middle - left)/0.5/(fgUnfoldedAxis->GetBinWidth(i) + fgUnfoldedAxis->GetBinWidth(i+1)); | |
1682 | ||
1683 | diff = (der1 - der2)/(fgUnfoldedAxis->GetBinWidth(i-1) + fgUnfoldedAxis->GetBinWidth(i) + fgUnfoldedAxis->GetBinWidth(i-1))*3.0; | |
1684 | diff = 1e4*diff*diff; | |
1685 | } | |
1686 | if (fgRegularizationType == kPowerLaw && i > 1+fgSkipBinsBegin) | |
1687 | { | |
19442b86 | 1688 | |
9e065ad2 | 1689 | if (params[i] < 1e-8 || params[i-1] < 1e-8 || params[i-2] < 1e-8) |
1690 | continue; | |
1691 | ||
1692 | if (fgUnfoldedAxis->GetBinWidth(i+1) < 1e-8 || fgUnfoldedAxis->GetBinWidth(i) < 1e-8 || fgUnfoldedAxis->GetBinWidth(i) < 1e-8) | |
1693 | continue; | |
1694 | ||
1695 | double middle = TMath::Power(params[i-1] / fgUnfoldedAxis->GetBinWidth(i),fgPowern); | |
1696 | ||
1697 | if(middle>0) { | |
1698 | double right = TMath::Power(params[i] / fgUnfoldedAxis->GetBinWidth(i+1),fgPowern)/middle; | |
1699 | ||
1700 | double left = TMath::Power(params[i-2] / fgUnfoldedAxis->GetBinWidth(i-1),fgPowern)/middle; | |
1701 | ||
1702 | middle = 1.; | |
1703 | ||
1704 | Double_t der1 = (right - middle) / ((fgUnfoldedAxis->GetBinWidth(i+1) + fgUnfoldedAxis->GetBinWidth(i)) / 2); | |
1705 | Double_t der2 = (middle - left) / ((fgUnfoldedAxis->GetBinWidth(i) + fgUnfoldedAxis->GetBinWidth(i-1)) / 2); | |
1706 | ||
1707 | diff = (der1 - der2) * (der1 - der2);// / error; | |
1708 | } | |
1709 | } | |
1710 | ||
1711 | if (fgRegularizationType == kLogLog && i > 1+fgSkipBinsBegin) | |
1712 | { | |
1713 | ||
1714 | if (params[i] < 1e-8 || params[i-1] < 1e-8 || params[i-2] < 1e-8) | |
1715 | continue; | |
1716 | ||
1717 | Double_t right = log(params[i] / (*fgEfficiency)(i) / fgUnfoldedAxis->GetBinWidth(i+1)); | |
1718 | Double_t middle = log(params[i-1] / (*fgEfficiency)(i-1) / fgUnfoldedAxis->GetBinWidth(i)); | |
1719 | Double_t left = log(params[i-2] / (*fgEfficiency)(i-2) / fgUnfoldedAxis->GetBinWidth(i-1)); | |
1720 | ||
1721 | Double_t der1 = (right - middle) / ( log(fgUnfoldedAxis->GetBinCenter(i+1)) - log(fgUnfoldedAxis->GetBinCenter(i)) ); | |
1722 | Double_t der2 = (middle - left) /( log(fgUnfoldedAxis->GetBinCenter(i)) - log(fgUnfoldedAxis->GetBinCenter(i-1)) ); | |
1723 | ||
1724 | double tmp = (log(fgUnfoldedAxis->GetBinCenter(i+1)) - log(fgUnfoldedAxis->GetBinCenter(i-1)))/2.; | |
1725 | Double_t dder = (der1-der2) / tmp; | |
1726 | ||
1727 | diff = dder * dder; | |
1728 | } | |
1729 | ||
1730 | penalty->SetBinContent(i, diff*fgRegularizationWeight); | |
19442b86 | 1731 | |
1732 | //Printf("%d %f %f %f %f", i-1, left, middle, right, diff); | |
1733 | } | |
95e970ca | 1734 | |
1735 | return penalty; | |
19442b86 | 1736 | } |
1737 | ||
1738 | //____________________________________________________________________ | |
1739 | void AliUnfolding::TF1Function(Int_t& unused1, Double_t* unused2, Double_t& chi2, Double_t *params, Int_t unused3) | |
1740 | { | |
1741 | // | |
1742 | // fit function for minuit | |
1743 | // uses the TF1 stored in fgFitFunction | |
1744 | // | |
1745 | ||
1746 | for (Int_t i=0; i<fgFitFunction->GetNpar(); i++) | |
1747 | fgFitFunction->SetParameter(i, params[i]); | |
1748 | ||
1749 | Double_t* params2 = new Double_t[fgMaxParams]; | |
1750 | ||
1751 | for (Int_t i=0; i<fgMaxParams; ++i) | |
1752 | params2[i] = fgFitFunction->Eval(i); | |
1753 | ||
1754 | Chi2Function(unused1, unused2, chi2, params2, unused3); | |
1755 | ||
1756 | delete[] params2; | |
1757 | ||
1758 | if (fgDebug) | |
1759 | Printf("%f", chi2); | |
1760 | } | |
1761 | ||
1762 | //____________________________________________________________________ | |
1763 | Int_t AliUnfolding::UnfoldWithFunction(TH2* correlation, TH1* efficiency, TH1* measured, TH1* /* initialConditions */, TH1* aResult) | |
1764 | { | |
1765 | // | |
1766 | // correct spectrum using minuit chi2 method applying a functional fit | |
1767 | // | |
1768 | ||
1769 | if (!fgFitFunction) | |
1770 | { | |
1771 | Printf("AliUnfolding::UnfoldWithFunction: ERROR fit function not set. Exiting."); | |
1772 | return -1; | |
1773 | } | |
1774 | ||
1775 | SetChi2Regularization(kNone, 0); | |
1776 | ||
95e970ca | 1777 | SetStaticVariables(correlation, measured, efficiency); |
19442b86 | 1778 | |
1779 | // Initialize TMinuit via generic fitter interface | |
1780 | TVirtualFitter *minuit = TVirtualFitter::Fitter(0, fgFitFunction->GetNpar()); | |
1781 | ||
1782 | minuit->SetFCN(TF1Function); | |
1783 | for (Int_t i=0; i<fgFitFunction->GetNpar(); i++) | |
1784 | { | |
1785 | Double_t lower, upper; | |
1786 | fgFitFunction->GetParLimits(i, lower, upper); | |
1787 | minuit->SetParameter(i, Form("param%d",i), fgFitFunction->GetParameter(i), fgMinuitStepSize, lower, upper); | |
1788 | } | |
1789 | ||
1790 | Double_t arglist[100]; | |
1791 | arglist[0] = 0; | |
1792 | minuit->ExecuteCommand("SET PRINT", arglist, 1); | |
9e065ad2 | 1793 | minuit->ExecuteCommand("SCAN", arglist, 0); |
19442b86 | 1794 | minuit->ExecuteCommand("MIGRAD", arglist, 0); |
1795 | //minuit->ExecuteCommand("MINOS", arglist, 0); | |
1796 | ||
1797 | for (Int_t i=0; i<fgFitFunction->GetNpar(); i++) | |
1798 | fgFitFunction->SetParameter(i, minuit->GetParameter(i)); | |
1799 | ||
1800 | for (Int_t i=0; i<fgMaxParams; ++i) | |
1801 | { | |
1802 | Double_t value = fgFitFunction->Eval(i); | |
1803 | if (fgDebug) | |
1804 | Printf("%d : %f", i, value); | |
1805 | ||
1806 | if (efficiency) | |
1807 | { | |
1808 | if (efficiency->GetBinContent(i+1) > 0) | |
1809 | { | |
1810 | value /= efficiency->GetBinContent(i+1); | |
1811 | } | |
1812 | else | |
1813 | value = 0; | |
1814 | } | |
1815 | aResult->SetBinContent(i+1, value); | |
1816 | aResult->SetBinError(i+1, 0); | |
1817 | } | |
1818 | ||
1819 | return 0; | |
1820 | } | |
1821 | ||
1822 | //____________________________________________________________________ | |
1823 | void AliUnfolding::CreateOverflowBin(TH2* correlation, TH1* measured) | |
1824 | { | |
1825 | // Finds the first bin where the content is below fgStatLimit and combines all values for this bin and larger bins | |
1826 | // The same limit is applied to the correlation | |
1827 | ||
1828 | Int_t lastBin = 0; | |
1829 | for (Int_t i=1; i<=measured->GetNbinsX(); ++i) | |
1830 | { | |
1831 | if (measured->GetBinContent(i) <= fgOverflowBinLimit) | |
1832 | { | |
1833 | lastBin = i; | |
1834 | break; | |
1835 | } | |
1836 | } | |
1837 | ||
1838 | if (lastBin == 0) | |
1839 | { | |
1840 | Printf("AliUnfolding::CreateOverflowBin: WARNING: First bin is already below limit of %f", fgOverflowBinLimit); | |
1841 | return; | |
1842 | } | |
1843 | ||
1844 | Printf("AliUnfolding::CreateOverflowBin: Bin limit in measured spectrum determined to be %d", lastBin); | |
1845 | ||
1846 | TCanvas* canvas = 0; | |
1847 | ||
1848 | if (fgDebug) | |
1849 | { | |
1850 | canvas = new TCanvas("StatSolution", "StatSolution", 1000, 800); | |
1851 | canvas->Divide(2, 2); | |
1852 | ||
1853 | canvas->cd(1); | |
1854 | measured->SetStats(kFALSE); | |
1855 | measured->DrawCopy(); | |
1856 | gPad->SetLogy(); | |
1857 | ||
1858 | canvas->cd(2); | |
1859 | correlation->SetStats(kFALSE); | |
1860 | correlation->DrawCopy("COLZ"); | |
1861 | } | |
1862 | ||
1863 | measured->SetBinContent(lastBin, measured->Integral(lastBin, measured->GetNbinsX())); | |
1864 | for (Int_t i=lastBin+1; i<=measured->GetNbinsX(); ++i) | |
1865 | { | |
1866 | measured->SetBinContent(i, 0); | |
1867 | measured->SetBinError(i, 0); | |
1868 | } | |
1869 | // the error is set to sqrt(N), better solution possible?, sum of relative errors of all contributions??? | |
1870 | measured->SetBinError(lastBin, TMath::Sqrt(measured->GetBinContent(lastBin))); | |
1871 | ||
1872 | Printf("AliUnfolding::CreateOverflowBin: This bin has now %f +- %f entries", measured->GetBinContent(lastBin), measured->GetBinError(lastBin)); | |
1873 | ||
1874 | for (Int_t i=1; i<=correlation->GetNbinsX(); ++i) | |
1875 | { | |
1876 | correlation->SetBinContent(i, lastBin, correlation->Integral(i, i, lastBin, correlation->GetNbinsY())); | |
1877 | // the error is set to sqrt(N), better solution possible?, sum of relative errors of all contributions??? | |
1878 | correlation->SetBinError(i, lastBin, TMath::Sqrt(correlation->GetBinContent(i, lastBin))); | |
1879 | ||
1880 | for (Int_t j=lastBin+1; j<=correlation->GetNbinsY(); ++j) | |
1881 | { | |
1882 | correlation->SetBinContent(i, j, 0); | |
1883 | correlation->SetBinError(i, j, 0); | |
1884 | } | |
1885 | } | |
1886 | ||
1887 | Printf("AliUnfolding::CreateOverflowBin: Adjusted correlation matrix!"); | |
1888 | ||
1889 | if (canvas) | |
1890 | { | |
1891 | canvas->cd(3); | |
1892 | measured->DrawCopy(); | |
1893 | gPad->SetLogy(); | |
1894 | ||
1895 | canvas->cd(4); | |
1896 | correlation->DrawCopy("COLZ"); | |
1897 | } | |
1898 | } | |
95e970ca | 1899 | |
1900 | Int_t AliUnfolding::UnfoldGetBias(TH2* correlation, TH1* efficiency, TH1* measured, TH1* initialConditions, TH1* result) | |
1901 | { | |
1902 | // unfolds and assigns bias as errors with Eq. 19 of Cowan, "a survey of unfolding methods for particle physics" | |
1903 | // b_i = sum_j dmu_i/dn_j (nu_j - n_j) with nu_j as folded guess, n_j as data | |
1904 | // dmu_i/dn_j is found numerically by changing the bin content and re-unfolding | |
1905 | // | |
1906 | // return code: 0 (success) -1 (error: from Unfold(...) ) | |
1907 | ||
1908 | if (Unfold(correlation, efficiency, measured, initialConditions, result) != 0) | |
1909 | return -1; | |
1910 | ||
1911 | TMatrixD matrix(fgMaxInput, fgMaxParams); | |
1912 | ||
1913 | TH1* newResult[4]; | |
1914 | for (Int_t loop=0; loop<4; loop++) | |
1915 | newResult[loop] = (TH1*) result->Clone(Form("newresult_%d", loop)); | |
1916 | ||
1917 | // change bin-by-bin and built matrix of effects | |
1918 | for (Int_t m=0; m<fgMaxInput; m++) | |
1919 | { | |
1920 | if (measured->GetBinContent(m+1) < 1) | |
1921 | continue; | |
1922 | ||
1923 | for (Int_t loop=0; loop<4; loop++) | |
1924 | { | |
1925 | //Printf("%d %d", i, loop); | |
1926 | Float_t factor = 1; | |
1927 | switch (loop) | |
1928 | { | |
1929 | case 0: factor = 0.5; break; | |
1930 | case 1: factor = -0.5; break; | |
1931 | case 2: factor = 1; break; | |
1932 | case 3: factor = -1; break; | |
1933 | default: return -1; | |
1934 | } | |
1935 | ||
1936 | TH1* measuredClone = (TH1*) measured->Clone("measuredClone"); | |
1937 | ||
1938 | measuredClone->SetBinContent(m+1, measured->GetBinContent(m+1) + factor * TMath::Sqrt(measured->GetBinContent(m+1))); | |
1939 | //new TCanvas; measuredClone->Draw("COLZ"); | |
1940 | ||
1941 | newResult[loop]->Reset(); | |
1942 | Unfold(correlation, efficiency, measuredClone, measuredClone, newResult[loop]); | |
1943 | // WARNING if we leave here, then nothing is calculated | |
1944 | //return -1; | |
1945 | ||
1946 | delete measuredClone; | |
1947 | } | |
1948 | ||
1949 | for (Int_t t=0; t<fgMaxParams; t++) | |
1950 | { | |
1951 | // one value | |
1952 | //matrix(i, j) = (result->GetBinContent(j+1) - newResult->GetBinContent(j+1)) / TMath::Sqrt(changedHist->GetBinContent(1, i+1)); | |
1953 | ||
1954 | // four values from the derivate (procedure taken from ROOT -- suggestion by Ruben) | |
1955 | // = 1/2D * [ 8 (f(D/2) - f(-D/2)) - (f(D)-f(-D)) ]/3 | |
1956 | ||
1957 | /* | |
1958 | // check formula | |
1959 | measured->SetBinContent(1, m+1, 100); | |
1960 | newResult[0]->SetBinContent(t+1, 5 * 0.5 + 10); | |
1961 | newResult[1]->SetBinContent(t+1, 5 * -0.5 + 10); | |
1962 | newResult[2]->SetBinContent(t+1, 5 * 1 + 10); | |
1963 | newResult[3]->SetBinContent(t+1, 5 * -1 + 10); | |
1964 | */ | |
1965 | ||
1966 | matrix(m, t) = 0.5 / TMath::Sqrt(measured->GetBinContent(m+1)) * | |
1967 | ( 8. * (newResult[0]->GetBinContent(t+1) - newResult[1]->GetBinContent(t+1)) - | |
1968 | (newResult[2]->GetBinContent(t+1) - newResult[3]->GetBinContent(t+1)) | |
1969 | ) / 3; | |
1970 | } | |
1971 | } | |
1972 | ||
1973 | for (Int_t loop=0; loop<4; loop++) | |
1974 | delete newResult[loop]; | |
1975 | ||
95e970ca | 1976 | // ...calculate folded guess |
1977 | TH1* convoluted = (TH1*) measured->Clone("convoluted"); | |
1978 | convoluted->Reset(); | |
1979 | for (Int_t m=0; m<fgMaxInput; m++) | |
1980 | { | |
1981 | Float_t value = 0; | |
1982 | for (Int_t t = 0; t<fgMaxParams; t++) | |
1983 | { | |
1984 | Float_t tmp = correlation->GetBinContent(t+1, m+1) * result->GetBinContent(t+1); | |
1985 | if (efficiency) | |
1986 | tmp *= efficiency->GetBinContent(t+1); | |
1987 | value += tmp; | |
1988 | } | |
1989 | convoluted->SetBinContent(m+1, value); | |
1990 | } | |
1991 | ||
1992 | // rescale | |
1993 | convoluted->Scale(measured->Integral() / convoluted->Integral()); | |
1994 | ||
1995 | //new TCanvas; convoluted->Draw(); measured->Draw("SAME"); measured->SetLineColor(2); | |
1996 | //return; | |
1997 | ||
1998 | // difference | |
1999 | convoluted->Add(measured, -1); | |
2000 | ||
2001 | // ...and the bias | |
2002 | for (Int_t t = 0; t<fgMaxParams; t++) | |
2003 | { | |
2004 | Double_t error = 0; | |
2005 | for (Int_t m=0; m<fgMaxInput; m++) | |
2006 | error += matrix(m, t) * convoluted->GetBinContent(m+1); | |
2007 | result->SetBinError(t+1, error); | |
2008 | } | |
2009 | ||
2010 | //new TCanvas; result->Draw(); gPad->SetLogy(); | |
2011 | ||
2012 | return 0; | |
2013 | } |