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a38a7850 | 1 | // @(#) $Id$ |
4aa41877 | 2 | // Original: AliHLTClustFinderNew.cxx,v 1.29 2005/06/14 10:55:21 cvetan Exp |
a38a7850 | 3 | |
297174de | 4 | //************************************************************************** |
5 | //* This file is property of and copyright by the ALICE HLT Project * | |
6 | //* ALICE Experiment at CERN, All rights reserved. * | |
7 | //* * | |
8 | //* Primary Authors: Anders Vestbo, Constantin Loizides * | |
9 | //* Developers: Kenneth Aamodt <kenneth.aamodt@student.uib.no> * | |
10 | //* Kalliopi Kanaki * | |
11 | //* for The ALICE HLT Project. * | |
12 | //* * | |
13 | //* Permission to use, copy, modify and distribute this software and its * | |
14 | //* documentation strictly for non-commercial purposes is hereby granted * | |
15 | //* without fee, provided that the above copyright notice appears in all * | |
16 | //* copies and that both the copyright notice and this permission notice * | |
17 | //* appear in the supporting documentation. The authors make no claims * | |
18 | //* about the suitability of this software for any purpose. It is * | |
19 | //* provided "as is" without express or implied warranty. * | |
20 | //************************************************************************** | |
a38a7850 | 21 | |
600e6a1b | 22 | /** @file AliHLTTPCClusterFinder.cxx |
98034d0d | 23 | @author Kenneth Aamodt, Kalliopi Kanaki |
600e6a1b | 24 | @date |
25 | @brief Cluster Finder for the TPC | |
26 | */ | |
a38a7850 | 27 | |
28 | #include "AliHLTTPCDigitReader.h" | |
a38a7850 | 29 | #include "AliHLTTPCRootTypes.h" |
30 | #include "AliHLTTPCLogging.h" | |
31 | #include "AliHLTTPCClusterFinder.h" | |
a38a7850 | 32 | #include "AliHLTTPCSpacePointData.h" |
33 | #include "AliHLTTPCMemHandler.h" | |
46b33a24 | 34 | #include "AliHLTTPCPad.h" |
8252a538 | 35 | #include <sys/time.h> |
deba5d85 | 36 | #include <algorithm> |
a38a7850 | 37 | |
38 | #if __GNUC__ >= 3 | |
39 | using namespace std; | |
40 | #endif | |
41 | ||
a38a7850 | 42 | ClassImp(AliHLTTPCClusterFinder) |
43 | ||
44 | AliHLTTPCClusterFinder::AliHLTTPCClusterFinder() | |
46b33a24 | 45 | : |
2fdb1ae7 | 46 | fClustersHWAddressVector(), |
47 | fRowPadVector(), | |
2a083ac4 | 48 | fSpacePointData(NULL), |
49 | fDigitReader(NULL), | |
50 | fPtr(NULL), | |
51 | fSize(0), | |
6b15c309 | 52 | fDeconvTime(kFALSE), |
53 | fDeconvPad(kFALSE), | |
46b33a24 | 54 | fStdout(kFALSE), |
55 | fCalcerr(kTRUE), | |
56 | fRawSP(kFALSE), | |
57 | fFirstRow(0), | |
58 | fLastRow(0), | |
2a083ac4 | 59 | fCurrentRow(0), |
60 | fCurrentSlice(0), | |
61 | fCurrentPatch(0), | |
62 | fMatch(1), | |
63 | fThreshold(10), | |
2a083ac4 | 64 | fNClusters(0), |
65 | fMaxNClusters(0), | |
66 | fXYErr(0.2), | |
67 | fZErr(0.3), | |
01f43166 | 68 | fOccupancyLimit(1.0), |
64defa03 | 69 | fUnsorted(0), |
a74855c2 | 70 | fVectorInitialized(kFALSE), |
8252a538 | 71 | fClusters(), |
deba5d85 | 72 | fClustersMCInfo(), |
73 | fMCDigits(), | |
a74855c2 | 74 | fNumberOfPadsInRow(NULL), |
75 | fNumberOfRows(0), | |
2fdb1ae7 | 76 | fRowOfFirstCandidate(0), |
6b15c309 | 77 | fDoPadSelection(kFALSE), |
78 | fFirstTimeBin(0), | |
79 | fLastTimeBin(AliHLTTPCTransform::GetNTimeBins()), | |
80 | fTotalChargeOfPreviousClusterCandidate(0), | |
deba5d85 | 81 | fChargeOfCandidatesFalling(kFALSE), |
82 | f32BitFormat(kFALSE), | |
83 | fDoMC(kFALSE), | |
84 | fClusterMCVector() | |
a38a7850 | 85 | { |
8252a538 | 86 | //constructor |
46b33a24 | 87 | } |
a38a7850 | 88 | |
a912b63b | 89 | AliHLTTPCClusterFinder::~AliHLTTPCClusterFinder(){ |
90 | // see header file for class documentation | |
91 | ||
a38a7850 | 92 | //destructor |
8252a538 | 93 | if(fVectorInitialized){ |
94 | DeInitializePadArray(); | |
95 | } | |
96 | if(fNumberOfPadsInRow){ | |
97 | delete [] fNumberOfPadsInRow; | |
98 | fNumberOfPadsInRow=NULL; | |
99 | } | |
a38a7850 | 100 | } |
a912b63b | 101 | |
102 | void AliHLTTPCClusterFinder::InitSlice(Int_t slice,Int_t patch,Int_t nmaxpoints){ | |
103 | // see header file for class documentation | |
104 | ||
a38a7850 | 105 | //init slice |
106 | fNClusters = 0; | |
107 | fMaxNClusters = nmaxpoints; | |
108 | fCurrentSlice = slice; | |
109 | fCurrentPatch = patch; | |
a912b63b | 110 | fFirstRow=AliHLTTPCTransform::GetFirstRow(patch); |
111 | fLastRow=AliHLTTPCTransform::GetLastRow(patch); | |
37c9ee0f | 112 | |
113 | fClusters.clear(); | |
114 | fClustersMCInfo.clear(); | |
115 | fMCDigits.clear(); | |
116 | fClusterMCVector.clear(); | |
a38a7850 | 117 | } |
118 | ||
8252a538 | 119 | void AliHLTTPCClusterFinder::InitializePadArray(){ |
120 | // see header file for class documentation | |
121 | ||
122 | if(fCurrentPatch>5||fCurrentPatch<0){ | |
123 | HLTFatal("Patch is not set"); | |
124 | return; | |
125 | } | |
126 | ||
127 | HLTDebug("Patch number=%d",fCurrentPatch); | |
128 | ||
129 | fFirstRow = AliHLTTPCTransform::GetFirstRow(fCurrentPatch); | |
130 | fLastRow = AliHLTTPCTransform::GetLastRow(fCurrentPatch); | |
131 | ||
132 | fNumberOfRows=fLastRow-fFirstRow+1; | |
133 | fNumberOfPadsInRow= new UInt_t[fNumberOfRows]; | |
134 | ||
135 | memset( fNumberOfPadsInRow, 0, sizeof(Int_t)*(fNumberOfRows)); | |
136 | ||
a74855c2 | 137 | for(UInt_t i=0;i<fNumberOfRows;i++){ |
8252a538 | 138 | fNumberOfPadsInRow[i]=AliHLTTPCTransform::GetNPads(i+fFirstRow); |
139 | AliHLTTPCPadVector tmpRow; | |
288f1d48 | 140 | for(UInt_t j=0;j<=fNumberOfPadsInRow[i];j++){ |
8252a538 | 141 | AliHLTTPCPad *tmpPad = new AliHLTTPCPad(2); |
142 | tmpPad->SetID(i,j); | |
143 | tmpRow.push_back(tmpPad); | |
144 | } | |
145 | fRowPadVector.push_back(tmpRow); | |
146 | } | |
147 | fVectorInitialized=kTRUE; | |
148 | } | |
149 | ||
a912b63b | 150 | Int_t AliHLTTPCClusterFinder::DeInitializePadArray(){ |
8252a538 | 151 | // see header file for class documentation |
a912b63b | 152 | |
a74855c2 | 153 | for(UInt_t i=0;i<fNumberOfRows;i++){ |
288f1d48 | 154 | for(UInt_t j=0;j<=fNumberOfPadsInRow[i];j++){ |
8252a538 | 155 | delete fRowPadVector[i][j]; |
156 | fRowPadVector[i][j]=NULL; | |
157 | } | |
158 | fRowPadVector[i].clear(); | |
159 | } | |
160 | fRowPadVector.clear(); | |
161 | return 1; | |
162 | } | |
163 | ||
164 | ||
a38a7850 | 165 | |
a912b63b | 166 | void AliHLTTPCClusterFinder::SetOutputArray(AliHLTTPCSpacePointData *pt){ |
167 | // see header file for class documentation | |
a38a7850 | 168 | //set pointer to output |
169 | fSpacePointData = pt; | |
170 | } | |
171 | ||
a912b63b | 172 | |
173 | void AliHLTTPCClusterFinder::ReadDataUnsorted(void* ptr,unsigned long size){ | |
174 | // see header file for class documentation | |
a38a7850 | 175 | //set input pointer |
176 | fPtr = (UChar_t*)ptr; | |
177 | fSize = size; | |
a38a7850 | 178 | |
a912b63b | 179 | if(!fVectorInitialized){ |
180 | InitializePadArray(); | |
6b15c309 | 181 | } |
a912b63b | 182 | |
183 | if (fDigitReader->InitBlock(fPtr,fSize,fFirstRow,fLastRow,fCurrentPatch,fCurrentSlice)<0) { | |
184 | HLTError("failed setting up digit reader (InitBlock)"); | |
185 | return; | |
84645eb0 | 186 | } |
a912b63b | 187 | |
188 | while(fDigitReader->NextChannel()){ | |
189 | UInt_t row=fDigitReader->GetRow(); | |
190 | UInt_t pad=fDigitReader->GetPad(); | |
a38a7850 | 191 | |
a912b63b | 192 | if(row>=fRowPadVector.size()){ |
193 | HLTError("Row number is to large: %d, max is %d",row,fRowPadVector.size()-1); | |
194 | continue; | |
a38a7850 | 195 | } |
a912b63b | 196 | if(pad>=fRowPadVector[row].size()){ |
197 | HLTError("Pad number is to large: %d, max is %d",pad,fRowPadVector[row].size()); | |
198 | continue; | |
a38a7850 | 199 | } |
200 | ||
a912b63b | 201 | while(fDigitReader->NextBunch()){ |
202 | if(fDigitReader->GetBunchSize()>1){//to remove single timebin values, this will have to change at some point | |
203 | UInt_t time = fDigitReader->GetTime(); | |
204 | if((Int_t)time>=fFirstTimeBin && (Int_t)time+fDigitReader->GetBunchSize()<=fLastTimeBin){ | |
deba5d85 | 205 | // Kenneth: 20-04-09. The following if have been added because of inconsistency in the 40 bit decoder and the 32 bit decoder. |
206 | // GetSignals() in the 40 bit decoder returns an array of UInt_t while the 32 bit one returns UShort_t | |
207 | // The same is true for the function ReadDataUnsortedDeconvoluteTime() below. | |
208 | // In addition the signals are organized in the opposite direction | |
209 | if(f32BitFormat){ | |
210 | const UShort_t *bunchData= fDigitReader->GetSignalsShort(); | |
211 | AliHLTTPCClusters candidate; | |
212 | for(Int_t i=fDigitReader->GetBunchSize()-1;i>=0;i--){ | |
213 | candidate.fTotalCharge+=bunchData[i]; | |
214 | candidate.fTime += time*bunchData[i]; | |
215 | candidate.fTime2 += time*time*bunchData[i]; | |
216 | if(bunchData[i]>candidate.fQMax){ | |
217 | candidate.fQMax=bunchData[i]; | |
218 | } | |
219 | time++; | |
220 | } | |
221 | if(candidate.fTotalCharge>0){ | |
222 | candidate.fMean=candidate.fTime/candidate.fTotalCharge; | |
223 | candidate.fPad=candidate.fTotalCharge*pad; | |
224 | candidate.fPad2=candidate.fPad*pad; | |
225 | candidate.fLastMergedPad=pad; | |
226 | candidate.fRowNumber=row+fDigitReader->GetRowOffset(); | |
227 | } | |
228 | if(fRowPadVector[row][pad] != NULL){ | |
229 | fRowPadVector[row][pad]->AddClusterCandidate(candidate); | |
a912b63b | 230 | } |
46b33a24 | 231 | } |
deba5d85 | 232 | else{ |
233 | const UInt_t *bunchData= fDigitReader->GetSignals(); | |
234 | AliHLTTPCClusters candidate; | |
025ba4dc | 235 | const AliHLTTPCDigitData* digits = NULL; |
236 | if(fDoMC && (digits = fDigitReader->GetBunchDigits())!=NULL){ | |
deba5d85 | 237 | for(Int_t i=0;i<fDigitReader->GetBunchSize();i++){ |
238 | candidate.fTotalCharge+=bunchData[i]; | |
239 | candidate.fTime += time*bunchData[i]; | |
240 | candidate.fTime2 += time*time*bunchData[i]; | |
241 | if(bunchData[i]>candidate.fQMax){ | |
242 | candidate.fQMax=bunchData[i]; | |
243 | } | |
244 | fMCDigits.push_back(digits[i]); | |
245 | time++; | |
246 | } | |
247 | } | |
248 | else{ | |
249 | for(Int_t i=0;i<fDigitReader->GetBunchSize();i++){ | |
250 | candidate.fTotalCharge+=bunchData[i]; | |
251 | candidate.fTime += time*bunchData[i]; | |
252 | candidate.fTime2 += time*time*bunchData[i]; | |
253 | if(bunchData[i]>candidate.fQMax){ | |
254 | candidate.fQMax=bunchData[i]; | |
255 | } | |
256 | time++; | |
257 | } | |
258 | } | |
259 | if(candidate.fTotalCharge>0){ | |
260 | candidate.fMean=candidate.fTime/candidate.fTotalCharge; | |
261 | candidate.fPad=candidate.fTotalCharge*pad; | |
262 | candidate.fPad2=candidate.fPad*pad; | |
263 | candidate.fLastMergedPad=pad; | |
264 | candidate.fRowNumber=row+fDigitReader->GetRowOffset(); | |
265 | } | |
266 | if(fRowPadVector[row][pad] != NULL){ | |
267 | fRowPadVector[row][pad]->AddClusterCandidate(candidate); | |
268 | if(fDoMC){ | |
269 | fRowPadVector[row][pad]->AddCandidateDigits(fMCDigits); | |
270 | fMCDigits.clear(); | |
271 | } | |
272 | } | |
46b33a24 | 273 | } |
274 | } | |
275 | } | |
a912b63b | 276 | } |
277 | } | |
278 | } | |
a38a7850 | 279 | |
a912b63b | 280 | void AliHLTTPCClusterFinder::ReadDataUnsortedDeconvoluteTime(void* ptr,unsigned long size){ |
281 | // see header file for class documentation | |
738c049f | 282 | |
a912b63b | 283 | //set input pointer |
284 | fPtr = (UChar_t*)ptr; | |
285 | fSize = size; | |
738c049f | 286 | |
a912b63b | 287 | if(!fVectorInitialized){ |
288 | InitializePadArray(); | |
289 | } | |
738c049f | 290 | |
a912b63b | 291 | if (fDigitReader->InitBlock(fPtr,fSize,fFirstRow,fLastRow,fCurrentPatch,fCurrentSlice)<0) { |
292 | HLTError("failed setting up digit reader (InitBlock)"); | |
293 | return; | |
294 | } | |
295 | ||
296 | while(fDigitReader->NextChannel()){ | |
297 | UInt_t row=fDigitReader->GetRow(); | |
298 | UInt_t pad=fDigitReader->GetPad(); | |
46b33a24 | 299 | |
a912b63b | 300 | while(fDigitReader->NextBunch()){ |
301 | if(fDigitReader->GetBunchSize()>1){//to remove single timebin values, this will have to change at some point | |
302 | UInt_t time = fDigitReader->GetTime(); | |
303 | if((Int_t)time>=fFirstTimeBin && (Int_t)time+fDigitReader->GetBunchSize()<=fLastTimeBin){ | |
304 | Int_t indexInBunchData=0; | |
305 | Bool_t moreDataInBunch=kFALSE; | |
306 | UInt_t prevSignal=0; | |
307 | Bool_t signalFalling=kFALSE; | |
deba5d85 | 308 | |
309 | // Kenneth: 20-04-09. The following if have been added because of inconsistency in the 40 bit decoder and the 32 bit decoder. | |
310 | // GetSignals() in the 40 bit decoder returns an array of UInt_t while the 32 bit one returns UShort_t | |
311 | // The same is true for the function ReadDataUnsorted() above. | |
312 | // In addition the signals are organized in the opposite direction | |
313 | if(f32BitFormat){ | |
314 | indexInBunchData = fDigitReader->GetBunchSize(); | |
315 | const UShort_t *bunchData= fDigitReader->GetSignalsShort(); | |
316 | do{ | |
317 | AliHLTTPCClusters candidate; | |
318 | //for(Int_t i=indexInBunchData;i<fDigitReader->GetBunchSize();i++){ | |
319 | for(Int_t i=indexInBunchData;i>=0;i--){ | |
320 | // Checks if one need to deconvolute the signals | |
321 | if(bunchData[i]>prevSignal && signalFalling==kTRUE){ | |
322 | if(i<fDigitReader->GetBunchSize()-1){ // means there are more than one signal left in the bunch | |
323 | moreDataInBunch=kTRUE; | |
324 | prevSignal=0; | |
325 | } | |
326 | break; | |
327 | } | |
328 | ||
329 | // Checks if the signal is 0, then quit processing the data. | |
330 | if(bunchData[i]==0 && i<fDigitReader->GetBunchSize()-1){//means we have 0 data fom the rcu, might happen depending on the configuration settings | |
a912b63b | 331 | moreDataInBunch=kTRUE; |
332 | prevSignal=0; | |
deba5d85 | 333 | break; |
334 | } | |
335 | ||
336 | if(prevSignal>bunchData[i]){//means the peak of the signal has been reached and deconvolution will happen if the signal rise again. | |
337 | signalFalling=kTRUE; | |
338 | } | |
339 | candidate.fTotalCharge+=bunchData[i]; | |
340 | candidate.fTime += time*bunchData[i]; | |
341 | candidate.fTime2 += time*time*bunchData[i]; | |
342 | if(bunchData[i]>candidate.fQMax){ | |
343 | candidate.fQMax=bunchData[i]; | |
a912b63b | 344 | } |
deba5d85 | 345 | |
346 | prevSignal=bunchData[i]; | |
347 | time++; | |
348 | indexInBunchData--; | |
a912b63b | 349 | } |
deba5d85 | 350 | if(candidate.fTotalCharge>0){ |
351 | candidate.fMean=candidate.fTime/candidate.fTotalCharge; | |
352 | candidate.fPad=candidate.fTotalCharge*pad; | |
353 | candidate.fPad2=candidate.fPad*pad; | |
354 | candidate.fLastMergedPad=pad; | |
355 | candidate.fRowNumber=row+fDigitReader->GetRowOffset(); | |
a912b63b | 356 | } |
deba5d85 | 357 | fRowPadVector[row][pad]->AddClusterCandidate(candidate); |
358 | fRowPadVector[row][pad]->AddCandidateDigits(fMCDigits); | |
359 | if(indexInBunchData<fDigitReader->GetBunchSize()-1){ | |
360 | moreDataInBunch=kFALSE; | |
a912b63b | 361 | } |
deba5d85 | 362 | }while(moreDataInBunch); |
363 | } | |
364 | else{ | |
365 | const UInt_t *bunchData= fDigitReader->GetSignals(); | |
366 | do{ | |
367 | AliHLTTPCClusters candidate; | |
368 | for(Int_t i=indexInBunchData;i<fDigitReader->GetBunchSize();i++){ | |
369 | // Checks if one need to deconvolute the signals | |
370 | if(bunchData[i]>prevSignal && signalFalling==kTRUE){ | |
371 | if(i<fDigitReader->GetBunchSize()-1){ // means there are more than one signal left in the bunch | |
372 | moreDataInBunch=kTRUE; | |
373 | prevSignal=0; | |
374 | } | |
375 | break; | |
376 | } | |
377 | ||
378 | // Checks if the signal is 0, then quit processing the data. | |
379 | if(bunchData[i]==0 && i<fDigitReader->GetBunchSize()-1){//means we have 0 data fom the rcu, might happen depending on the configuration settings | |
380 | moreDataInBunch=kTRUE; | |
381 | prevSignal=0; | |
382 | break; | |
383 | } | |
384 | ||
385 | if(prevSignal>bunchData[i]){//means the peak of the signal has been reached and deconvolution will happen if the signal rise again. | |
386 | signalFalling=kTRUE; | |
387 | } | |
388 | candidate.fTotalCharge+=bunchData[i]; | |
389 | candidate.fTime += time*bunchData[i]; | |
390 | candidate.fTime2 += time*time*bunchData[i]; | |
391 | if(bunchData[i]>candidate.fQMax){ | |
392 | candidate.fQMax=bunchData[i]; | |
393 | } | |
394 | ||
395 | prevSignal=bunchData[i]; | |
396 | time++; | |
397 | indexInBunchData++; | |
a912b63b | 398 | } |
deba5d85 | 399 | if(candidate.fTotalCharge>0){ |
400 | candidate.fMean=candidate.fTime/candidate.fTotalCharge; | |
401 | candidate.fPad=candidate.fTotalCharge*pad; | |
402 | candidate.fPad2=candidate.fPad*pad; | |
403 | candidate.fLastMergedPad=pad; | |
404 | candidate.fRowNumber=row+fDigitReader->GetRowOffset(); | |
405 | } | |
406 | fRowPadVector[row][pad]->AddClusterCandidate(candidate); | |
407 | if(indexInBunchData<fDigitReader->GetBunchSize()-1){ | |
408 | moreDataInBunch=kFALSE; | |
409 | } | |
410 | }while(moreDataInBunch); | |
411 | } | |
a912b63b | 412 | } |
413 | } | |
414 | } | |
415 | } | |
416 | } | |
417 | ||
418 | Bool_t AliHLTTPCClusterFinder::ComparePads(AliHLTTPCPad *nextPad,AliHLTTPCClusters* cluster,Int_t nextPadToRead){ | |
419 | // see header file for class documentation | |
420 | ||
421 | //Checking if we have a match on the next pad | |
422 | for(UInt_t candidateNumber=0;candidateNumber<nextPad->fClusterCandidates.size();candidateNumber++){ | |
423 | AliHLTTPCClusters *candidate =&nextPad->fClusterCandidates[candidateNumber]; | |
424 | if(cluster->fMean-candidate->fMean==1 || candidate->fMean-cluster->fMean==1 || cluster->fMean-candidate->fMean==0){ | |
425 | if(fDeconvPad){ | |
426 | if(candidate->fTotalCharge<fTotalChargeOfPreviousClusterCandidate){//peak is reached | |
427 | fChargeOfCandidatesFalling=kTRUE; | |
428 | } | |
429 | if(candidate->fTotalCharge>fTotalChargeOfPreviousClusterCandidate && fChargeOfCandidatesFalling==kTRUE){//we have deconvolution | |
430 | return kFALSE; | |
431 | } | |
432 | } | |
433 | cluster->fMean=candidate->fMean; | |
434 | cluster->fTotalCharge+=candidate->fTotalCharge; | |
435 | cluster->fTime += candidate->fTime; | |
436 | cluster->fTime2 += candidate->fTime2; | |
437 | cluster->fPad+=candidate->fPad; | |
438 | cluster->fPad2+=candidate->fPad2; | |
439 | cluster->fLastMergedPad=candidate->fPad; | |
440 | if(candidate->fQMax>cluster->fQMax){ | |
441 | cluster->fQMax=candidate->fQMax; | |
442 | } | |
deba5d85 | 443 | if(fDoMC){ |
444 | FillMCClusterVector(nextPad->GetCandidateDigits(candidateNumber)); | |
445 | } | |
446 | ||
a912b63b | 447 | if(fDoPadSelection){ |
448 | UInt_t rowNo = nextPad->GetRowNumber(); | |
449 | UInt_t padNo = nextPad->GetPadNumber(); | |
450 | if(padNo-1>0){ | |
451 | fRowPadVector[rowNo][padNo-2]->fSelectedPad=kTRUE; | |
452 | fRowPadVector[rowNo][padNo-2]->fHWAddress=(AliHLTUInt16_t)fDigitReader->GetAltroBlockHWaddr(rowNo,padNo-2); | |
453 | } | |
454 | fRowPadVector[rowNo][padNo-1]->fSelectedPad=kTRUE;// quick solution to set the first pad to selected | |
455 | fRowPadVector[rowNo][padNo-1]->fHWAddress=(AliHLTUInt16_t)fDigitReader->GetAltroBlockHWaddr(rowNo,padNo-1); | |
456 | fRowPadVector[rowNo][padNo]->fSelectedPad=kTRUE; | |
457 | fRowPadVector[rowNo][padNo]->fHWAddress=(AliHLTUInt16_t)fDigitReader->GetAltroBlockHWaddr(rowNo,padNo); | |
458 | } | |
459 | ||
460 | //setting the matched pad to used | |
461 | nextPad->fUsedClusterCandidates[candidateNumber]=1; | |
462 | nextPadToRead++; | |
463 | if(nextPadToRead<(Int_t)fNumberOfPadsInRow[fRowOfFirstCandidate]){ | |
464 | nextPad=fRowPadVector[fRowOfFirstCandidate][nextPadToRead]; | |
465 | ComparePads(nextPad,cluster,nextPadToRead); | |
466 | } | |
467 | else{ | |
468 | return kFALSE; | |
469 | } | |
470 | } | |
471 | else{ | |
472 | return kFALSE; | |
473 | } | |
474 | } | |
475 | return kFALSE; | |
476 | } | |
477 | ||
478 | Int_t AliHLTTPCClusterFinder::FillHWAddressList(AliHLTUInt16_t *hwaddlist, Int_t maxHWadd){ | |
479 | // see header file for class documentation | |
480 | ||
481 | Int_t counter=0; | |
482 | for(UInt_t row=0;row<fNumberOfRows;row++){ | |
483 | for(UInt_t pad=0;pad<fNumberOfPadsInRow[row]-1;pad++){ | |
484 | if(fRowPadVector[row][pad]->fSelectedPad){ | |
485 | if(counter<maxHWadd){ | |
486 | hwaddlist[counter]=(AliHLTUInt16_t)fRowPadVector[row][pad]->fHWAddress; | |
487 | counter++; | |
488 | } | |
489 | else{ | |
490 | HLTWarning("To many hardwareaddresses, skip adding"); | |
491 | } | |
492 | ||
493 | } | |
494 | } | |
495 | } | |
496 | return counter; | |
497 | } | |
deba5d85 | 498 | |
499 | ||
500 | Int_t AliHLTTPCClusterFinder::FillOutputMCInfo(AliHLTTPCClusterFinder::ClusterMCInfo * outputMCInfo, Int_t maxNumberOfClusterMCInfo){ | |
501 | // see header file for class documentation | |
502 | ||
503 | Int_t counter=0; | |
504 | ||
505 | for(UInt_t mc=0;mc<fClustersMCInfo.size();mc++){ | |
506 | if(counter<maxNumberOfClusterMCInfo){ | |
507 | outputMCInfo[counter] = fClustersMCInfo[mc]; | |
508 | counter++; | |
509 | } | |
510 | else{ | |
511 | HLTWarning("To much MCInfo has been added (no more space), skip adding"); | |
512 | } | |
513 | } | |
514 | return counter; | |
515 | } | |
a912b63b | 516 | |
517 | void AliHLTTPCClusterFinder::FindClusters(){ | |
518 | // see header file for function documentation | |
519 | ||
520 | AliHLTTPCClusters* tmpCandidate=NULL; | |
521 | for(UInt_t row=0;row<fNumberOfRows;row++){ | |
522 | fRowOfFirstCandidate=row; | |
523 | for(UInt_t pad=0;pad<fNumberOfPadsInRow[row];pad++){ | |
524 | AliHLTTPCPad *tmpPad=fRowPadVector[row][pad]; | |
525 | for(size_t candidate=0;candidate<tmpPad->fClusterCandidates.size();candidate++){ | |
526 | if(tmpPad->fUsedClusterCandidates[candidate]){ | |
527 | continue; | |
528 | } | |
529 | tmpCandidate=&tmpPad->fClusterCandidates[candidate]; | |
530 | UInt_t tmpTotalCharge=tmpCandidate->fTotalCharge; | |
531 | ||
deba5d85 | 532 | if(fDoMC){ |
533 | fClusterMCVector.clear(); | |
534 | FillMCClusterVector(tmpPad->GetCandidateDigits(candidate)); | |
535 | } | |
536 | ||
a912b63b | 537 | ComparePads(fRowPadVector[row][pad+1],tmpCandidate,pad+1); |
538 | if(tmpCandidate->fTotalCharge>tmpTotalCharge){ | |
539 | //we have a cluster | |
540 | fClusters.push_back(*tmpCandidate); | |
deba5d85 | 541 | if(fDoMC){ |
542 | //sort the vector (large->small) according to weight and remove elements above 2 (keep 0 1 and 2) | |
37c9ee0f | 543 | sort(fClusterMCVector.begin(),fClusterMCVector.end(), MCWeight::CompareWeights ); |
deba5d85 | 544 | ClusterMCInfo tmpClusterMCInfo; |
545 | ||
546 | MCWeight zeroMC; | |
547 | zeroMC.fMCID=-1; | |
548 | zeroMC.fWeight=0; | |
549 | ||
550 | if(fClusterMCVector.size()>0){ | |
551 | tmpClusterMCInfo.fClusterID[0]=fClusterMCVector.at(0); | |
552 | } | |
553 | else{ | |
554 | tmpClusterMCInfo.fClusterID[0]=zeroMC; | |
555 | } | |
556 | ||
557 | if(fClusterMCVector.size()>1){ | |
558 | tmpClusterMCInfo.fClusterID[1]=fClusterMCVector.at(1); | |
559 | } | |
560 | else{ | |
561 | tmpClusterMCInfo.fClusterID[1]=zeroMC; | |
562 | } | |
563 | ||
564 | if(fClusterMCVector.size()>2){ | |
565 | tmpClusterMCInfo.fClusterID[2]=fClusterMCVector.at(2); | |
566 | } | |
567 | else{ | |
568 | tmpClusterMCInfo.fClusterID[2]=zeroMC; | |
569 | } | |
570 | ||
571 | fClustersMCInfo.push_back(tmpClusterMCInfo); | |
572 | } | |
573 | ||
a912b63b | 574 | } |
575 | } | |
576 | tmpPad->ClearCandidates(); | |
577 | } | |
578 | fRowPadVector[row][fNumberOfPadsInRow[row]]->ClearCandidates(); | |
579 | } | |
580 | ||
581 | HLTInfo("Found %d clusters.",fClusters.size()); | |
582 | ||
583 | //TODO: Change so it stores AliHLTTPCSpacePointData directly, instead of this copying | |
584 | ||
585 | AliClusterData * clusterlist = new AliClusterData[fClusters.size()]; //Clusterlist | |
586 | for(unsigned int i=0;i<fClusters.size();i++){ | |
587 | clusterlist[i].fTotalCharge = fClusters[i].fTotalCharge; | |
588 | clusterlist[i].fPad = fClusters[i].fPad; | |
589 | clusterlist[i].fPad2 = fClusters[i].fPad2; | |
590 | clusterlist[i].fTime = fClusters[i].fTime; | |
591 | clusterlist[i].fTime2 = fClusters[i].fTime2; | |
592 | clusterlist[i].fMean = fClusters[i].fMean; | |
593 | clusterlist[i].fFlags = fClusters[i].fFlags; | |
594 | clusterlist[i].fChargeFalling = fClusters[i].fChargeFalling; | |
595 | clusterlist[i].fLastCharge = fClusters[i].fLastCharge; | |
596 | clusterlist[i].fLastMergedPad = fClusters[i].fLastMergedPad; | |
597 | clusterlist[i].fRow = fClusters[i].fRowNumber; | |
598 | clusterlist[i].fQMax = fClusters[i].fQMax; | |
599 | } | |
600 | ||
601 | WriteClusters(fClusters.size(),clusterlist); | |
602 | delete [] clusterlist; | |
603 | fClusters.clear(); | |
604 | } | |
605 | ||
606 | ||
607 | //---------------------------------- Under this line the old sorted clusterfinder functions can be found -------------------------------- | |
608 | ||
609 | ||
610 | void AliHLTTPCClusterFinder::PrintClusters(){ | |
611 | // see header file for class documentation | |
612 | ||
613 | for(size_t i=0;i<fClusters.size();i++){ | |
614 | HLTInfo("Cluster number: %d",i); | |
615 | HLTInfo("Row: %d \t Pad: %d",fClusters[i].fRowNumber,fClusters[i].fPad/fClusters[i].fTotalCharge); | |
616 | HLTInfo("Total Charge: %d",fClusters[i].fTotalCharge); | |
617 | HLTInfo("fPad: %d",fClusters[i].fPad); | |
618 | HLTInfo("PadError: %d",fClusters[i].fPad2); | |
619 | HLTInfo("TimeMean: %d",fClusters[i].fTime/fClusters[i].fTotalCharge); | |
620 | HLTInfo("TimeError: %d",fClusters[i].fTime2); | |
621 | HLTInfo("EndOfCluster:"); | |
622 | } | |
623 | } | |
624 | ||
deba5d85 | 625 | void AliHLTTPCClusterFinder::FillMCClusterVector(vector<AliHLTTPCDigitData> digitData){ |
626 | ||
627 | for(UInt_t d=0;d<digitData.size();d++){ | |
628 | Int_t nIDsInDigit = (digitData.at(d).fTrackID[0]>=0) + (digitData.at(d).fTrackID[1]>=0) + (digitData.at(d).fTrackID[2]>=0); | |
629 | for(Int_t id=0; id<3; id++){ | |
630 | if(digitData.at(d).fTrackID[id]>=0){ | |
631 | Bool_t matchFound = kFALSE; | |
632 | MCWeight mc; | |
633 | mc.fMCID = digitData.at(d).fTrackID[id]; | |
634 | mc.fWeight = ((Float_t)digitData.at(d).fCharge)/nIDsInDigit; | |
635 | for(UInt_t i=0;i<fClusterMCVector.size();i++){ | |
636 | if(mc.fMCID == fClusterMCVector.at(i).fMCID){ | |
637 | fClusterMCVector.at(i).fWeight += mc.fWeight; | |
638 | matchFound = kTRUE; | |
639 | } | |
640 | } | |
641 | if(matchFound == kFALSE){ | |
642 | fClusterMCVector.push_back(mc); | |
643 | } | |
644 | } | |
645 | } | |
646 | } | |
647 | } | |
648 | ||
649 | ||
a912b63b | 650 | void AliHLTTPCClusterFinder::Read(void* ptr,unsigned long size){ |
651 | //set input pointer | |
652 | fPtr = (UChar_t*)ptr; | |
653 | fSize = size; | |
654 | } | |
655 | ||
656 | void AliHLTTPCClusterFinder::ProcessDigits(){ | |
657 | // see header file for class documentation | |
658 | ||
659 | int iResult=0; | |
660 | bool readValue = true; | |
661 | Int_t newRow = 0; | |
662 | Int_t rowOffset = 0; | |
663 | UShort_t time=0,newTime=0; | |
664 | UInt_t pad=0,newPad=0; | |
665 | AliHLTTPCSignal_t charge=0; | |
666 | ||
667 | fNClusters = 0; | |
668 | ||
669 | // initialize block for reading packed data | |
670 | iResult=fDigitReader->InitBlock(fPtr,fSize,fFirstRow,fLastRow,fCurrentPatch,fCurrentSlice); | |
671 | if (iResult<0) return; | |
672 | ||
673 | readValue = fDigitReader->Next(); | |
674 | ||
675 | // Matthias 08.11.2006 the following return would cause termination without writing the | |
676 | // ClusterData and thus would block the component. I just want to have the commented line | |
677 | // here for information | |
678 | //if (!readValue)return; | |
679 | ||
680 | pad = fDigitReader->GetPad(); | |
681 | time = fDigitReader->GetTime(); | |
682 | fCurrentRow = fDigitReader->GetRow(); | |
683 | ||
684 | if ( fCurrentPatch >= 2 ) // Outer sector, patches 2, 3, 4, 5 | |
685 | rowOffset = AliHLTTPCTransform::GetFirstRow( 2 ); | |
686 | ||
687 | fCurrentRow += rowOffset; | |
688 | ||
689 | UInt_t lastpad = 123456789; | |
690 | const UInt_t kPadArraySize=5000; | |
691 | const UInt_t kClusterListSize=10000; | |
692 | AliClusterData *pad1[kPadArraySize]; //2 lists for internal memory=2pads | |
693 | AliClusterData *pad2[kPadArraySize]; //2 lists for internal memory=2pads | |
694 | AliClusterData clusterlist[kClusterListSize]; //Clusterlist | |
695 | ||
696 | AliClusterData **currentPt; //List of pointers to the current pad | |
697 | AliClusterData **previousPt; //List of pointers to the previous pad | |
698 | currentPt = pad2; | |
699 | previousPt = pad1; | |
700 | UInt_t nprevious=0,ncurrent=0,ntotal=0; | |
701 | ||
702 | /* quick implementation of baseline calculation and zero suppression | |
703 | open a pad object for each pad and delete it after processing. | |
704 | later a list of pad objects with base line history can be used | |
705 | The whole thing only works if we really get unprocessed raw data, if | |
706 | the data is already zero suppressed, there might be gaps in the time | |
707 | bins. | |
708 | */ | |
709 | Int_t gatingGridOffset=50; | |
710 | if(fFirstTimeBin>0){ | |
711 | gatingGridOffset=fFirstTimeBin; | |
712 | } | |
713 | AliHLTTPCPad baseline(gatingGridOffset, AliHLTTPCTransform::GetNTimeBins()); | |
714 | // just to make later conversion to a list of objects easier | |
715 | AliHLTTPCPad* pCurrentPad=NULL; | |
716 | /* | |
717 | if (fSignalThreshold>=0) { | |
718 | pCurrentPad=&baseline; | |
719 | baseline.SetThreshold(fSignalThreshold); | |
720 | } | |
721 | */ | |
722 | while ( readValue!=0 && iResult>=0){ // Reads through all digits in block | |
723 | iResult=0; | |
724 | ||
725 | if(pad != lastpad){ | |
726 | //This is a new pad | |
727 | ||
728 | //Switch the lists: | |
729 | if(currentPt == pad2){ | |
730 | currentPt = pad1; | |
731 | previousPt = pad2; | |
732 | } | |
733 | else { | |
734 | currentPt = pad2; | |
735 | previousPt = pad1; | |
736 | } | |
737 | nprevious = ncurrent; | |
738 | ncurrent = 0; | |
739 | if(pad != lastpad+1){ | |
740 | //this happens if there is a pad with no signal. | |
741 | nprevious = ncurrent = 0; | |
742 | } | |
743 | lastpad = pad; | |
744 | } | |
745 | ||
746 | Bool_t newcluster = kTRUE; | |
747 | UInt_t seqcharge=0,seqaverage=0,seqerror=0; | |
748 | AliHLTTPCSignal_t lastcharge=0; | |
749 | UInt_t bLastWasFalling=0; | |
750 | Int_t newbin=-1; | |
751 | ||
752 | ||
753 | if(fDeconvTime){ | |
754 | redo: //This is a goto. | |
755 | ||
756 | if(newbin > -1){ | |
757 | //bin = newbin; | |
758 | newbin = -1; | |
759 | } | |
760 | ||
761 | lastcharge=0; | |
762 | bLastWasFalling = 0; | |
763 | } | |
764 | ||
765 | while(iResult>=0){ //Loop over time bins of current pad | |
766 | // read all the values for one pad at once to calculate the base line | |
767 | if (pCurrentPad) { | |
768 | if (!pCurrentPad->IsStarted()) { | |
769 | //HLTDebug("reading data for pad %d, padrow %d", fDigitReader->GetPad(), fDigitReader->GetRow()+rowOffset); | |
770 | pCurrentPad->SetID(fDigitReader->GetRow()+rowOffset,fDigitReader->GetPad()); | |
771 | if ((pCurrentPad->StartEvent())>=0) { | |
772 | do { | |
773 | if ((fDigitReader->GetRow()+rowOffset)!=pCurrentPad->GetRowNumber()) break; | |
774 | if (fDigitReader->GetPad()!=pCurrentPad->GetPadNumber()) break; | |
775 | pCurrentPad->SetRawData(fDigitReader->GetTime(), fDigitReader->GetSignal()); | |
776 | //HLTDebug("set raw data to pad: bin %d charge %d", fDigitReader->GetTime(), fDigitReader->GetSignal()); | |
777 | } while ((readValue = fDigitReader->Next())!=0); | |
778 | } | |
779 | pCurrentPad->CalculateBaseLine(AliHLTTPCTransform::GetNTimeBins()/2); | |
780 | if (pCurrentPad->Next(kTRUE/*do zero suppression*/)==0) { | |
781 | //HLTDebug("no data available after zero suppression"); | |
782 | pCurrentPad->StopEvent(); | |
783 | pCurrentPad->ResetHistory(); | |
784 | break; | |
785 | } | |
786 | time=pCurrentPad->GetCurrentPosition(); | |
787 | if (time>pCurrentPad->GetSize()) { | |
788 | HLTError("invalid time bin for pad"); | |
789 | break; | |
790 | } | |
791 | } | |
792 | } | |
793 | if (pCurrentPad) { | |
794 | Float_t occupancy=pCurrentPad->GetOccupancy(); | |
795 | //HLTDebug("pad %d occupancy level: %f", pCurrentPad->GetPadNumber(), occupancy); | |
796 | if ( occupancy < fOccupancyLimit ) { | |
797 | charge = pCurrentPad->GetCorrectedData(); | |
798 | } else { | |
799 | charge = 0; | |
800 | //HLTDebug("ignoring pad %d with occupancy level %f", pCurrentPad->GetPadNumber(), occupancy); | |
801 | } | |
802 | } else { | |
803 | charge = fDigitReader->GetSignal(); | |
804 | } | |
805 | //HLTDebug("get next charge value: position %d charge %d", time, charge); | |
806 | ||
807 | ||
808 | // CHARGE DEBUG | |
809 | if (fDigitReader->GetRow() == 90){ | |
810 | ///// LOG(AliHLTTPCLog::kFatal,"AliHLTTPCClusterFinder::Row","row90") << "PAD=" << fDigitReader->GetPad() << " TIME=" << fDigitReader->GetTime() | |
811 | // << " SIGNAL=" << fDigitReader->GetSignal() << ENDLOG; | |
812 | ||
813 | } | |
814 | ||
815 | if(time >= AliHLTTPCTransform::GetNTimeBins()){ | |
816 | HLTWarning("Pad %d: Timebin (%d) out of range (%d)", pad, time, AliHLTTPCTransform::GetNTimeBins()); | |
817 | iResult=-ERANGE; | |
818 | } | |
819 | ||
820 | ||
821 | //Get the current ADC-value | |
a38a7850 | 822 | if(fDeconvTime){ |
823 | ||
824 | //Check if the last pixel in the sequence is smaller than this | |
825 | if(charge > lastcharge){ | |
2a083ac4 | 826 | if(bLastWasFalling){ |
a38a7850 | 827 | newbin = 1; |
828 | break; | |
829 | } | |
830 | } | |
2a083ac4 | 831 | else bLastWasFalling = 1; //last pixel was larger than this |
a38a7850 | 832 | lastcharge = charge; |
833 | } | |
834 | ||
835 | //Sum the total charge of this sequence | |
836 | seqcharge += charge; | |
837 | seqaverage += time*charge; | |
838 | seqerror += time*time*charge; | |
839 | ||
46b33a24 | 840 | if (pCurrentPad) { |
841 | ||
842 | if((pCurrentPad->Next(kTRUE/*do zero suppression*/))==0) { | |
843 | pCurrentPad->StopEvent(); | |
844 | pCurrentPad->ResetHistory(); | |
845 | if(readValue) { | |
846 | newPad = fDigitReader->GetPad(); | |
847 | newTime = fDigitReader->GetTime(); | |
848 | newRow = fDigitReader->GetRow() + rowOffset; | |
849 | } | |
850 | break; | |
851 | } | |
852 | ||
853 | newPad=pCurrentPad->GetPadNumber(); | |
854 | newTime=pCurrentPad->GetCurrentPosition(); | |
855 | newRow=pCurrentPad->GetRowNumber(); | |
856 | } else { | |
a38a7850 | 857 | readValue = fDigitReader->Next(); |
a38a7850 | 858 | //Check where to stop: |
859 | if(!readValue) break; //No more value | |
860 | ||
861 | newPad = fDigitReader->GetPad(); | |
862 | newTime = fDigitReader->GetTime(); | |
863 | newRow = fDigitReader->GetRow() + rowOffset; | |
46b33a24 | 864 | } |
a38a7850 | 865 | |
866 | if(newPad != pad)break; //new pad | |
867 | if(newTime != time+1) break; //end of sequence | |
6b0fdc0e | 868 | if(iResult<0) break; |
a38a7850 | 869 | |
870 | // pad = newpad; is equal | |
871 | time = newTime; | |
872 | ||
873 | }//end loop over sequence | |
874 | ||
46b33a24 | 875 | //HLTDebug("ended time bin sequence loop: seqcharge=%d readValue=%d", seqcharge, readValue); |
876 | //HLTDebug("pad=%d newpad=%d current row=%d newrow=%d", pad, newPad, fCurrentRow, newRow); | |
877 | if (seqcharge<=0) { | |
878 | // with active zero suppression zero values are possible | |
879 | continue; | |
880 | } | |
a38a7850 | 881 | |
882 | //Calculate mean of sequence: | |
883 | Int_t seqmean=0; | |
884 | if(seqcharge) | |
885 | seqmean = seqaverage/seqcharge; | |
886 | else{ | |
887 | LOG(AliHLTTPCLog::kFatal,"AliHLTTPCClusterFinder::ProcessRow","Data") | |
888 | <<"Error in data given to the cluster finder"<<ENDLOG; | |
889 | seqmean = 1; | |
890 | seqcharge = 1; | |
891 | } | |
892 | ||
893 | //Calculate mean in pad direction: | |
894 | Int_t padmean = seqcharge*pad; | |
895 | Int_t paderror = pad*padmean; | |
896 | ||
a38a7850 | 897 | //Compare with results on previous pad: |
84645eb0 | 898 | for(UInt_t p=0; p<nprevious && p<kPadArraySize && ncurrent<kPadArraySize; p++){ |
a38a7850 | 899 | |
900 | //dont merge sequences on the same pad twice | |
901 | if(previousPt[p]->fLastMergedPad==pad) continue; | |
902 | ||
903 | Int_t difference = seqmean - previousPt[p]->fMean; | |
904 | if(difference < -fMatch) break; | |
905 | ||
906 | if(difference <= fMatch){ //There is a match here!! | |
907 | AliClusterData *local = previousPt[p]; | |
908 | ||
909 | if(fDeconvPad){ | |
910 | if(seqcharge > local->fLastCharge){ | |
911 | if(local->fChargeFalling){ //The previous pad was falling | |
912 | break; //create a new cluster | |
913 | } | |
914 | } | |
915 | else local->fChargeFalling = 1; | |
916 | local->fLastCharge = seqcharge; | |
917 | } | |
918 | ||
919 | //Don't create a new cluster, because we found a match | |
920 | newcluster = kFALSE; | |
921 | ||
922 | //Update cluster on current pad with the matching one: | |
923 | local->fTotalCharge += seqcharge; | |
924 | local->fPad += padmean; | |
925 | local->fPad2 += paderror; | |
926 | local->fTime += seqaverage; | |
927 | local->fTime2 += seqerror; | |
928 | local->fMean = seqmean; | |
929 | local->fFlags++; //means we have more than one pad | |
930 | local->fLastMergedPad = pad; | |
931 | ||
932 | currentPt[ncurrent] = local; | |
933 | ncurrent++; | |
934 | ||
935 | break; | |
936 | } //Checking for match at previous pad | |
937 | } //Loop over results on previous pad. | |
938 | ||
84645eb0 | 939 | if(newcluster && ncurrent<kPadArraySize){ |
a38a7850 | 940 | //Start a new cluster. Add it to the clusterlist, and update |
941 | //the list of pointers to clusters in current pad. | |
942 | //current pad will be previous pad on next pad. | |
943 | ||
944 | //Add to the clusterlist: | |
945 | AliClusterData *tmp = &clusterlist[ntotal]; | |
946 | tmp->fTotalCharge = seqcharge; | |
947 | tmp->fPad = padmean; | |
948 | tmp->fPad2 = paderror; | |
949 | tmp->fTime = seqaverage; | |
950 | tmp->fTime2 = seqerror; | |
951 | tmp->fMean = seqmean; | |
952 | tmp->fFlags = 0; //flags for single pad clusters | |
953 | tmp->fLastMergedPad = pad; | |
954 | ||
955 | if(fDeconvPad){ | |
956 | tmp->fChargeFalling = 0; | |
957 | tmp->fLastCharge = seqcharge; | |
958 | } | |
959 | ||
960 | //Update list of pointers to previous pad: | |
961 | currentPt[ncurrent] = &clusterlist[ntotal]; | |
962 | ntotal++; | |
963 | ncurrent++; | |
964 | } | |
965 | ||
966 | if(fDeconvTime) | |
967 | if(newbin >= 0) goto redo; | |
968 | ||
969 | // to prevent endless loop | |
970 | if(time >= AliHLTTPCTransform::GetNTimeBins()){ | |
46b33a24 | 971 | HLTWarning("Timebin (%d) out of range (%d)", time, AliHLTTPCTransform::GetNTimeBins()); |
a38a7850 | 972 | break; |
973 | } | |
974 | ||
975 | ||
976 | if(!readValue) break; //No more value | |
84645eb0 | 977 | |
978 | if (ntotal>=kClusterListSize || ncurrent>=kPadArraySize) { | |
979 | HLTWarning("pad array size exceeded ntotal=%d ncurrent=%d, skip rest of the data", ntotal, ncurrent); | |
980 | break; | |
981 | } | |
a38a7850 | 982 | |
983 | if(fCurrentRow != newRow){ | |
984 | WriteClusters(ntotal,clusterlist); | |
985 | ||
986 | lastpad = 123456789; | |
987 | ||
988 | currentPt = pad2; | |
989 | previousPt = pad1; | |
990 | nprevious=0; | |
991 | ncurrent=0; | |
992 | ntotal=0; | |
993 | ||
994 | fCurrentRow = newRow; | |
995 | } | |
996 | ||
997 | pad = newPad; | |
998 | time = newTime; | |
db16520a | 999 | |
a38a7850 | 1000 | } // END while(readValue) |
1001 | ||
1002 | WriteClusters(ntotal,clusterlist); | |
1003 | ||
46b33a24 | 1004 | HLTInfo("ClusterFinder found %d clusters in slice %d patch %d", fNClusters, fCurrentSlice, fCurrentPatch); |
a38a7850 | 1005 | |
1006 | } // ENDEND | |
1007 | ||
a912b63b | 1008 | void AliHLTTPCClusterFinder::WriteClusters(Int_t nclusters,AliClusterData *list){ |
1009 | // see header file for class documentation | |
1010 | ||
a38a7850 | 1011 | //write cluster to output pointer |
8f8bf0af | 1012 | Int_t thisrow=-1,thissector=-1; |
a38a7850 | 1013 | UInt_t counter = fNClusters; |
1014 | ||
1015 | for(int j=0; j<nclusters; j++) | |
1016 | { | |
d8b2f74a | 1017 | |
1018 | ||
1019 | ||
deba5d85 | 1020 | if(!list[j].fFlags){ |
1021 | if(fDoMC){ | |
03efd623 | 1022 | if(j+fClustersMCInfo.size()-nclusters >=0 && j+fClustersMCInfo.size()-nclusters < fClustersMCInfo.size()){ |
1023 | fClustersMCInfo.erase(fClustersMCInfo.begin()+j+fClustersMCInfo.size()-nclusters); // remove the mc info for this cluster since it is not taken into account | |
1024 | } | |
deba5d85 | 1025 | } |
1026 | continue; //discard single pad clusters | |
1027 | } | |
1028 | if(list[j].fTotalCharge < fThreshold){ | |
1029 | if(fDoMC){ | |
03efd623 | 1030 | if(j+fClustersMCInfo.size()-nclusters >=0 && j+fClustersMCInfo.size()-nclusters < fClustersMCInfo.size()){ |
1031 | fClustersMCInfo.erase(fClustersMCInfo.begin()+j+fClustersMCInfo.size()-nclusters); // remove the mc info for this cluster since it is not taken into account | |
1032 | } | |
deba5d85 | 1033 | } |
1034 | continue; //noise cluster | |
1035 | } | |
a38a7850 | 1036 | Float_t xyz[3]; |
1037 | Float_t fpad =(Float_t)list[j].fPad / list[j].fTotalCharge; | |
1038 | Float_t fpad2=fXYErr*fXYErr; //fixed given error | |
1039 | Float_t ftime =(Float_t)list[j].fTime / list[j].fTotalCharge; | |
1040 | Float_t ftime2=fZErr*fZErr; //fixed given error | |
1041 | ||
738c049f | 1042 | |
aff6e981 | 1043 | |
a912b63b | 1044 | if(fUnsorted){ |
1045 | fCurrentRow=list[j].fRow; | |
8252a538 | 1046 | } |
8252a538 | 1047 | |
a912b63b | 1048 | |
1049 | if(fCalcerr) { //calc the errors, otherwice take the fixed error | |
1050 | Int_t patch = AliHLTTPCTransform::GetPatch(fCurrentRow); | |
1051 | UInt_t q2=list[j].fTotalCharge*list[j].fTotalCharge; | |
1052 | // Float_t sy2=list[j].fPad2 * list[j].fTotalCharge - list[j].fPad * list[j].fPad; | |
1053 | Float_t sy2=(Float_t)list[j].fPad2 * list[j].fTotalCharge - (Float_t)list[j].fPad * list[j].fPad; | |
1054 | sy2/=q2; | |
1055 | if(sy2 < 0) { | |
1056 | LOG(AliHLTTPCLog::kError,"AliHLTTPCClusterFinder::WriteClusters","Cluster width") | |
1057 | <<"SigmaY2 negative "<<sy2<<" on row "<<fCurrentRow<<" "<<fpad<<" "<<ftime<<ENDLOG; | |
1058 | continue; | |
1059 | } else { | |
1060 | if(!fRawSP){ | |
1061 | fpad2 = (sy2 + 1./12)*AliHLTTPCTransform::GetPadPitchWidth(patch)*AliHLTTPCTransform::GetPadPitchWidth(patch); | |
1062 | if(sy2 != 0){ | |
1063 | fpad2*=0.108; //constants are from offline studies | |
1064 | if(patch<2) | |
1065 | fpad2*=2.07; | |
1066 | } | |
1067 | } else fpad2=sy2; //take the width not the error | |
6b15c309 | 1068 | } |
a912b63b | 1069 | // Float_t sz2=list[j].fTime2*list[j].fTotalCharge - list[j].fTime*list[j].fTime; |
1070 | Float_t sz2=(Float_t)list[j].fTime2*list[j].fTotalCharge - (Float_t)list[j].fTime*list[j].fTime; | |
1071 | sz2/=q2; | |
1072 | if(sz2 < 0){ | |
1073 | LOG(AliHLTTPCLog::kError,"AliHLTTPCClusterFinder::WriteClusters","Cluster width") | |
1074 | <<"SigmaZ2 negative "<<sz2<<" on row "<<fCurrentRow<<" "<<fpad<<" "<<ftime<<ENDLOG; | |
1075 | continue; | |
1076 | } else { | |
1077 | if(!fRawSP){ | |
1078 | ftime2 = (sz2 + 1./12)*AliHLTTPCTransform::GetZWidth()*AliHLTTPCTransform::GetZWidth(); | |
1079 | if(sz2 != 0) { | |
1080 | ftime2 *= 0.169; //constants are from offline studies | |
1081 | if(patch<2) | |
1082 | ftime2 *= 1.77; | |
1083 | } | |
1084 | } else ftime2=sz2; //take the width, not the error | |
6b15c309 | 1085 | } |
1086 | } | |
a912b63b | 1087 | if(fStdout==kTRUE) |
1088 | HLTInfo("WriteCluster: padrow %d pad %d +- %d time +- %d charge %d",fCurrentRow, fpad, fpad2, ftime, ftime2, list[j].fTotalCharge); | |
6b15c309 | 1089 | |
a912b63b | 1090 | if(!fRawSP){ |
1091 | AliHLTTPCTransform::Slice2Sector(fCurrentSlice,fCurrentRow,thissector,thisrow); | |
1092 | AliHLTTPCTransform::Raw2Local(xyz,thissector,thisrow,fpad,ftime); | |
1093 | ||
1094 | if(xyz[0]==0) LOG(AliHLTTPCLog::kError,"AliHLTTPCClustFinder","Cluster Finder") | |
1095 | <<AliHLTTPCLog::kDec<<"Zero cluster"<<ENDLOG; | |
1096 | if(fNClusters >= fMaxNClusters) | |
1097 | { | |
1098 | LOG(AliHLTTPCLog::kError,"AliHLTTPCClustFinder::WriteClusters","Cluster Finder") | |
1099 | <<AliHLTTPCLog::kDec<<"Too many clusters "<<fNClusters<<ENDLOG; | |
1100 | return; | |
1101 | } | |
1102 | ||
1103 | fSpacePointData[counter].fX = xyz[0]; | |
1104 | // fSpacePointData[counter].fY = xyz[1]; | |
1105 | if(fCurrentSlice<18){ | |
1106 | fSpacePointData[counter].fY = xyz[1]; | |
6b15c309 | 1107 | } |
a912b63b | 1108 | else{ |
1109 | fSpacePointData[counter].fY = -1*xyz[1]; | |
1110 | } | |
1111 | fSpacePointData[counter].fZ = xyz[2]; | |
8252a538 | 1112 | |
a912b63b | 1113 | } else { |
1114 | fSpacePointData[counter].fX = fCurrentRow; | |
1115 | fSpacePointData[counter].fY = fpad; | |
1116 | fSpacePointData[counter].fZ = ftime; | |
8252a538 | 1117 | } |
a912b63b | 1118 | |
1119 | fSpacePointData[counter].fCharge = list[j].fTotalCharge; | |
1120 | fSpacePointData[counter].fPadRow = fCurrentRow; | |
1121 | fSpacePointData[counter].fSigmaY2 = fpad2; | |
1122 | fSpacePointData[counter].fSigmaZ2 = ftime2; | |
64defa03 | 1123 | |
a912b63b | 1124 | fSpacePointData[counter].fQMax = list[j].fQMax; |
2fdb1ae7 | 1125 | |
a912b63b | 1126 | fSpacePointData[counter].fUsed = kFALSE; // only used / set in AliHLTTPCDisplay |
1127 | fSpacePointData[counter].fTrackN = -1; // only used / set in AliHLTTPCDisplay | |
8252a538 | 1128 | |
a912b63b | 1129 | Int_t patch=fCurrentPatch; |
1130 | if(patch==-1) patch=0; //never store negative patch number | |
1131 | fSpacePointData[counter].fID = counter | |
1132 | +((fCurrentSlice&0x7f)<<25)+((patch&0x7)<<22);//Uli | |
6b15c309 | 1133 | |
a912b63b | 1134 | #ifdef do_mc |
1135 | Int_t trackID[3]; | |
1136 | GetTrackID((Int_t)rint(fpad),(Int_t)rint(ftime),trackID); | |
1137 | ||
1138 | fSpacePointData[counter].fTrackID[0] = trackID[0]; | |
1139 | fSpacePointData[counter].fTrackID[1] = trackID[1]; | |
1140 | fSpacePointData[counter].fTrackID[2] = trackID[2]; | |
1141 | ||
1142 | #endif | |
1143 | ||
1144 | fNClusters++; | |
1145 | counter++; | |
8252a538 | 1146 | } |
a912b63b | 1147 | } |
8252a538 | 1148 | |
a912b63b | 1149 | // STILL TO FIX ---------------------------------------------------------------------------- |
8252a538 | 1150 | |
a912b63b | 1151 | #ifdef do_mc |
1152 | void AliHLTTPCClusterFinder::GetTrackID(Int_t pad,Int_t time,Int_t *trackID){ | |
1153 | // see header file for class documentation | |
1154 | ||
1155 | //get mc id | |
1156 | AliHLTTPCDigitRowData *rowPt = (AliHLTTPCDigitRowData*)fDigitRowData; | |
8252a538 | 1157 | |
a912b63b | 1158 | trackID[0]=trackID[1]=trackID[2]=-2; |
1159 | for(Int_t i=fFirstRow; i<=fLastRow; i++){ | |
1160 | if(rowPt->fRow < (UInt_t)fCurrentRow){ | |
1161 | AliHLTTPCMemHandler::UpdateRowPointer(rowPt); | |
1162 | continue; | |
1163 | } | |
1164 | AliHLTTPCDigitData *digPt = (AliHLTTPCDigitData*)rowPt->fDigitData; | |
1165 | for(UInt_t j=0; j<rowPt->fNDigit; j++){ | |
1166 | Int_t cpad = digPt[j].fPad; | |
1167 | Int_t ctime = digPt[j].fTime; | |
1168 | if(cpad != pad) continue; | |
1169 | if(ctime != time) continue; | |
fec96a66 | 1170 | |
a912b63b | 1171 | trackID[0] = digPt[j].fTrackID[0]; |
1172 | trackID[1] = digPt[j].fTrackID[1]; | |
1173 | trackID[2] = digPt[j].fTrackID[2]; | |
1174 | ||
1175 | break; | |
1176 | } | |
1177 | break; | |
8252a538 | 1178 | } |
01f43166 | 1179 | } |
a912b63b | 1180 | #endif |
64defa03 | 1181 | |
a912b63b | 1182 | |
1183 | ||
1184 | void AliHLTTPCClusterFinder::WriteClusters(Int_t nclusters,AliHLTTPCClusters *list){//This is used when using the AliHLTTPCClusters class for cluster data | |
8252a538 | 1185 | // see header file for class documentation |
8252a538 | 1186 | |
01f43166 | 1187 | //write cluster to output pointer |
1188 | Int_t thisrow,thissector; | |
1189 | UInt_t counter = fNClusters; | |
1190 | ||
1191 | for(int j=0; j<nclusters; j++) | |
1192 | { | |
1193 | if(!list[j].fFlags) continue; //discard single pad clusters | |
1194 | if(list[j].fTotalCharge < fThreshold) continue; //noise cluster | |
1195 | ||
1196 | Float_t xyz[3]; | |
1197 | Float_t fpad =(Float_t)list[j].fPad / list[j].fTotalCharge; | |
1198 | Float_t fpad2=fXYErr*fXYErr; //fixed given error | |
1199 | Float_t ftime =(Float_t)list[j].fTime / list[j].fTotalCharge; | |
1200 | Float_t ftime2=fZErr*fZErr; //fixed given error | |
1201 | ||
d8b2f74a | 1202 | |
01f43166 | 1203 | if(fCalcerr) { //calc the errors, otherwice take the fixed error |
1204 | Int_t patch = AliHLTTPCTransform::GetPatch(fCurrentRow); | |
1205 | UInt_t q2=list[j].fTotalCharge*list[j].fTotalCharge; | |
1206 | Float_t sy2=list[j].fPad2 * list[j].fTotalCharge - list[j].fPad * list[j].fPad; | |
1207 | sy2/=q2; | |
1208 | if(sy2 < 0) { | |
1209 | LOG(AliHLTTPCLog::kError,"AliHLTTPCClusterFinder::WriteClusters","Cluster width") | |
1210 | <<"SigmaY2 negative "<<sy2<<" on row "<<fCurrentRow<<" "<<fpad<<" "<<ftime<<ENDLOG; | |
1211 | continue; | |
1212 | } else { | |
1213 | if(!fRawSP){ | |
1214 | fpad2 = (sy2 + 1./12)*AliHLTTPCTransform::GetPadPitchWidth(patch)*AliHLTTPCTransform::GetPadPitchWidth(patch); | |
1215 | if(sy2 != 0){ | |
1216 | fpad2*=0.108; //constants are from offline studies | |
1217 | if(patch<2) | |
1218 | fpad2*=2.07; | |
1219 | } | |
1220 | } else fpad2=sy2; //take the width not the error | |
1221 | } | |
1222 | Float_t sz2=list[j].fTime2*list[j].fTotalCharge - list[j].fTime*list[j].fTime; | |
1223 | sz2/=q2; | |
1224 | if(sz2 < 0){ | |
1225 | LOG(AliHLTTPCLog::kError,"AliHLTTPCClusterFinder::WriteClusters","Cluster width") | |
1226 | <<"SigmaZ2 negative "<<sz2<<" on row "<<fCurrentRow<<" "<<fpad<<" "<<ftime<<ENDLOG; | |
1227 | continue; | |
1228 | } else { | |
1229 | if(!fRawSP){ | |
1230 | ftime2 = (sz2 + 1./12)*AliHLTTPCTransform::GetZWidth()*AliHLTTPCTransform::GetZWidth(); | |
1231 | if(sz2 != 0) { | |
1232 | ftime2 *= 0.169; //constants are from offline studies | |
1233 | if(patch<2) | |
1234 | ftime2 *= 1.77; | |
1235 | } | |
1236 | } else ftime2=sz2; //take the width, not the error | |
1237 | } | |
1238 | } | |
1239 | if(fStdout==kTRUE) | |
8252a538 | 1240 | HLTInfo("WriteCluster: padrow %d pad %d +- %d time +- %d charge %d",fCurrentRow, fpad, fpad2, ftime, ftime2, list[j].fTotalCharge); |
1241 | ||
01f43166 | 1242 | if(!fRawSP){ |
1243 | AliHLTTPCTransform::Slice2Sector(fCurrentSlice,fCurrentRow,thissector,thisrow); | |
1244 | AliHLTTPCTransform::Raw2Local(xyz,thissector,thisrow,fpad,ftime); | |
1245 | ||
1246 | if(xyz[0]==0) LOG(AliHLTTPCLog::kError,"AliHLTTPCClustFinder","Cluster Finder") | |
1247 | <<AliHLTTPCLog::kDec<<"Zero cluster"<<ENDLOG; | |
1248 | if(fNClusters >= fMaxNClusters) | |
1249 | { | |
1250 | LOG(AliHLTTPCLog::kError,"AliHLTTPCClustFinder::WriteClusters","Cluster Finder") | |
1251 | <<AliHLTTPCLog::kDec<<"Too many clusters "<<fNClusters<<ENDLOG; | |
1252 | return; | |
1253 | } | |
1254 | ||
1255 | fSpacePointData[counter].fX = xyz[0]; | |
6b15c309 | 1256 | // fSpacePointData[counter].fY = xyz[1]; |
1257 | if(fCurrentSlice<18){ | |
1258 | fSpacePointData[counter].fY = xyz[1]; | |
1259 | } | |
1260 | else{ | |
1261 | fSpacePointData[counter].fY = -1*xyz[1]; | |
1262 | } | |
01f43166 | 1263 | fSpacePointData[counter].fZ = xyz[2]; |
1264 | ||
1265 | } else { | |
1266 | fSpacePointData[counter].fX = fCurrentRow; | |
1267 | fSpacePointData[counter].fY = fpad; | |
1268 | fSpacePointData[counter].fZ = ftime; | |
1269 | } | |
1270 | ||
1271 | fSpacePointData[counter].fCharge = list[j].fTotalCharge; | |
1272 | fSpacePointData[counter].fPadRow = fCurrentRow; | |
1273 | fSpacePointData[counter].fSigmaY2 = fpad2; | |
1274 | fSpacePointData[counter].fSigmaZ2 = ftime2; | |
1275 | ||
a912b63b | 1276 | fSpacePointData[counter].fQMax = list[j].fQMax; |
6b15c309 | 1277 | |
01f43166 | 1278 | fSpacePointData[counter].fUsed = kFALSE; // only used / set in AliHLTTPCDisplay |
1279 | fSpacePointData[counter].fTrackN = -1; // only used / set in AliHLTTPCDisplay | |
1280 | ||
1281 | Int_t patch=fCurrentPatch; | |
1282 | if(patch==-1) patch=0; //never store negative patch number | |
1283 | fSpacePointData[counter].fID = counter | |
1284 | +((fCurrentSlice&0x7f)<<25)+((patch&0x7)<<22);//Uli | |
1285 | ||
1286 | #ifdef do_mc | |
1287 | Int_t trackID[3]; | |
1288 | GetTrackID((Int_t)rint(fpad),(Int_t)rint(ftime),trackID); | |
1289 | ||
1290 | fSpacePointData[counter].fTrackID[0] = trackID[0]; | |
1291 | fSpacePointData[counter].fTrackID[1] = trackID[1]; | |
1292 | fSpacePointData[counter].fTrackID[2] = trackID[2]; | |
1293 | ||
01f43166 | 1294 | #endif |
1295 | ||
1296 | fNClusters++; | |
1297 | counter++; | |
1298 | } | |
1299 | } |