[u/mrichter/AliRoot.git] / PHOS / AliPHOSRawDecoderv1.cxx

/**************************************************************************
 * Copyright(c) 2007, ALICE Experiment at CERN, All rights reserved.      *
 *                                                                        *
 * Author: The ALICE Off-line Project.                                    *
 * Contributors are mentioned in the code where appropriate.              *
 *                                                                        *
 * Permission to use, copy, modify and distribute this software and its   *
 * documentation strictly for non-commercial purposes is hereby granted   *
 * without fee, provided that the above copyright notice appears in all   *
 * copies and that both the copyright notice and this permission notice   *
 * appear in the supporting documentation. The authors make no claims     *
 * about the suitability of this software for any purpose. It is          *
 * provided "as is" without express or implied warranty.                  *
 **************************************************************************/

/* $Id$ */

// This class decodes the stream of ALTRO samples to extract
// the PHOS "digits" of current event. Uses fitting procedure
// to separate reasonable samples
// 
// Typical use case:
//     AliRawReader* rf = new AliRawReaderDate("2006run2211.raw");
//     AliPHOSRawDecoder dc(rf);
//     while (rf->NextEvent()) {
//       dc.SubtractPedestals(kTRUE);
//       while ( dc.NextDigit() ) {
//         Int_t module = dc.GetModule();
//         Int_t column = dc.GetColumn();
//         Int_t row = dc.GetRow();
//         Double_t amplitude = dc.GetEnergy();
//         Double_t time = dc.GetTime();
//         Bool_t IsLowGain = dc.IsLowGain();
//            ..........
//       }
//     }

// Author: Dmitri Peressounko

// --- ROOT system ---
#include "TList.h"
#include "TMath.h"
#include "TMinuit.h"

#include "TCanvas.h"
#include "TH1.h"
#include "TH2.h"
#include "TF1.h"
#include "TROOT.h"

// --- AliRoot header files ---
//#include "AliLog.h"
#include "AliPHOSRawDecoderv1.h"
#include "AliPHOSPulseGenerator.h"


ClassImp(AliPHOSRawDecoderv1)

//-----------------------------------------------------------------------------
  AliPHOSRawDecoderv1::AliPHOSRawDecoderv1():AliPHOSRawDecoder(),
fSampleParamsLow(0x0),fSampleParamsHigh(0x0),fToFit(0x0)
{
  //Default constructor.
}

//-----------------------------------------------------------------------------
AliPHOSRawDecoderv1::AliPHOSRawDecoderv1(AliRawReader* rawReader,  AliAltroMapping **mapping):
  AliPHOSRawDecoder(rawReader,mapping),
  fSampleParamsLow(0x0),fSampleParamsHigh(0x0),fToFit(0x0)
{
  //Construct a decoder object.
  //Is is user responsibility to provide next raw event 
  //using AliRawReader::NextEvent().

  if(!gMinuit) 
    gMinuit = new TMinuit(100);
  fSampleParamsHigh =new TArrayD(7) ;
  fSampleParamsHigh->AddAt(2.174,0) ;
  fSampleParamsHigh->AddAt(0.106,1) ;
  fSampleParamsHigh->AddAt(0.173,2) ;
  fSampleParamsHigh->AddAt(0.06106,3) ;
  //last two parameters are pedestal and overflow
  fSampleParamsLow=new TArrayD(7) ;
  fSampleParamsLow->AddAt(2.456,0) ;
  fSampleParamsLow->AddAt(0.137,1) ;
  fSampleParamsLow->AddAt(2.276,2) ;
  fSampleParamsLow->AddAt(0.08246,3) ;
  fToFit = new TList() ;
}

//-----------------------------------------------------------------------------
AliPHOSRawDecoderv1::~AliPHOSRawDecoderv1()
{
  //Destructor.
  if(fSampleParamsLow){
    delete fSampleParamsLow ; 
    fSampleParamsLow=0 ;
  }
  if(fSampleParamsHigh){
    delete fSampleParamsHigh ;
    fSampleParamsHigh=0;
  }
  if(fToFit){
    delete fToFit ;
    fToFit=0 ;
  }
}

//-----------------------------------------------------------------------------
AliPHOSRawDecoderv1::AliPHOSRawDecoderv1(const AliPHOSRawDecoderv1 &phosDecoder ):
  AliPHOSRawDecoder(phosDecoder), 
  fSampleParamsLow(0x0),fSampleParamsHigh(0x0),fToFit(0x0)
{
  //Copy constructor.
  fToFit = new TList() ;
  fSampleParamsLow =new TArrayD(*(phosDecoder.fSampleParamsLow)) ;
  fSampleParamsHigh=new TArrayD(*(phosDecoder.fSampleParamsHigh)) ;
}

//-----------------------------------------------------------------------------
AliPHOSRawDecoderv1& AliPHOSRawDecoderv1::operator = (const AliPHOSRawDecoderv1 &phosDecoder)
{
  //Assignment operator.

  //  if(this != &phosDecoder) {
  //  }
  fToFit = new TList() ;
  if(fSampleParamsLow){
    fSampleParamsLow = phosDecoder.fSampleParamsLow ;
    fSampleParamsHigh= phosDecoder.fSampleParamsHigh ;
  }
  else{
    fSampleParamsLow =new TArrayD(*(phosDecoder.fSampleParamsLow)) ; 
    fSampleParamsHigh=new TArrayD(*(phosDecoder.fSampleParamsHigh)) ;
  }
  return *this;
}

//-----------------------------------------------------------------------------
Bool_t AliPHOSRawDecoderv1::NextDigit()
{
  //Extract an energy deposited in the crystal,
  //crystal' position (module,column,row),
  //time and gain (high or low).
  //First collects sample, then evaluates it and if it has
  //reasonable shape, fits it with Gamma2 function and extracts 
  //energy and time.

//Debug=====================
//  TCanvas * c = 0; //(TCanvas*)gROOT->FindObjectAny("CSample") ;
//  if(!c)
//    c = new TCanvas("CSample","CSample") ;
// 
//  TH1D * h = 0 ; //(TH1D*)gROOT->FindObjectAny("hSample") ;
//  if(!h)
//    h=new TH1D("hSample","",200,0.,200.) ;
// 
//  TF1 * fff = 0 ; //(TF1*)gROOT->FindObjectAny("fff") ;
//  if(!fff)
//    fff = new TF1("fff","[0]+[1]*((abs(x-[2]))^[3]*exp(-(x-[2])*[4])+[5]*(x-[2])*(x-[2])*exp(-(x-[2])*[6]))",0.,1000.) ;
//End debug===========
  
  AliCaloRawStream* in = fCaloStream;
  
  Int_t    iBin     = fSamples->GetSize() ;
  Int_t    tLength  = 0;
  fEnergy = -111;
  Float_t pedMean = 0;
  Float_t pedRMS = 0;
  Int_t   nPed = 0;
  Float_t baseLine = 1.0;
  const Float_t nPreSamples = 10;
  fQuality= 999. ;
  const Float_t sampleMaxHG=102.332 ;  //maximal height of HG sample with given parameterization
  const Float_t sampleMaxLG=277.196 ;  //maximal height of HG sample with given parameterization
  const Float_t maxEtoFit=5 ; //fit only samples above this energy, accept all samples (with good aRMS) below it

  while ( in->Next() ) { 

    if(!tLength) {
      tLength = in->GetTimeLength();
      if(tLength!=fSamples->GetSize()) {
	delete fSamples ;
	delete fTimes ;
	fSamples = new TArrayI(tLength);
	fTimes = new TArrayI(tLength);
        iBin= fSamples->GetSize() ;
      }
      else{
        fSamples->Reset() ;
      }
    }
    
    // Fit the full sample
    if((in->IsNewHWAddress() && iBin != fSamples->GetSize()) //new HW address
       ||(iBin<=0)) {  //or new signal in same address

      //First remember new sample
      fNewLowGainFlag = in->IsLowGain();                                                                                                        
      fNewModule = in->GetModule()+1;                                                                                                           
      fNewRow    = in->GetRow()   +1;                                                                                                           
      fNewColumn = in->GetColumn()+1;                                                                                                           
      fNewAmp = in->GetSignal() ;
      fNewTime=in->GetTime() ;  
  
      //now handle already collected 
      Double_t pedestal =0. ;
      fPedestalRMS=0. ;
      if(fPedSubtract){ 
	if (nPed > 0){
	  pedestal = (Double_t)(pedMean/nPed); 
          fPedestalRMS=pedRMS/nPed-pedestal*pedestal ;
          if(fPedestalRMS>0.) fPedestalRMS=TMath::Sqrt(fPedestalRMS) ;
        }
	else
	  return kFALSE;
      }

      //calculate time and energy
      Int_t maxBin=0 ;
      Int_t maxAmp=0 ;
      Double_t aMean=0. ;                                                                                                                  
      Double_t aRMS=0. ;                                                                                                                   
      Double_t wts=0 ;                                                                                                                       
      Int_t tStart = 0 ;                                                                                                                   
      for(Int_t i=iBin; i<fSamples->GetSize(); i++){
        if(fSamples->At(i)>0){                                                                                                             
          Double_t de=fSamples->At(i)-pedestal ;                                                                                           
          if(de>1.){
            aMean+=de*i ;                                                                                                                      
            aRMS+=de*i*i ;                                                                                                                    
            wts+=de; 
          }                                                                                                                         
          if(de>2 && tStart==0) 
            tStart=i ;                                                                                                                     
          if(maxAmp<fSamples->At(i)){
            maxBin=i ;
            maxAmp=fSamples->At(i) ;
          }
        }
      }
      if(maxBin==fSamples->GetSize()-1){//bad "rising" sample
        fEnergy=0. ;
        fTime=-999.;
        fQuality= 999. ;
        return kTRUE ;
      }
      fEnergy=Double_t(maxAmp)-pedestal ;
      fOverflow =0 ;  //look for plato on the top of sample
      if(fEnergy>500 &&  //this is not fluctuation of soft sample
         maxBin<fSamples->GetSize()-1 && fSamples->At(maxBin+1)==maxAmp){ //and there is a plato
         fOverflow = kTRUE ;
      }
      
      if(wts>0){
	aMean/=wts; 
	aRMS=aRMS/wts-aMean*aMean;
      }

      //do not take too small energies
      if(fEnergy < baseLine) 
         fEnergy = 0;

      //do not test quality of too soft samples
      if(fEnergy<maxEtoFit){
        fTime=fTimes->At(tStart);
        if(aRMS<2.) //sigle peak
          fQuality=999. ;
        else
          fQuality= 0. ;                                                                                                                   
        return kTRUE ;                                                                                                                     
      } 

      
//Debug:=====Draw sample
//if(fEnergy>pedestal+10.){
//if(fLowGainFlag && fEnergy>2){
//  if(!c)
//    if(!fLowGainFlag && fRow==32 && fColumn==18){
//    TCanvas *c = new TCanvas("CSample","CSample") ;
//    c->cd() ;
//    h->Draw() ;
//    c->Update() ;
// printf("fEnergy=%f, aRMS=%f \n",fEnergy,aRMS) ;   
//getchar() ;
//}
//======================

      //IF sample has reasonable mean and RMS, try to fit it with gamma2
	
	gMinuit->mncler();                     // Reset Minuit's list of paramters
	gMinuit->SetPrintLevel(-1) ;           // No Printout
	gMinuit->SetFCN(AliPHOSRawDecoderv1::UnfoldingChiSquare) ;  
	// To set the address of the minimization function 
 	
       fToFit->Clear() ;
       Double_t b,bmin,bmax ;
       if(fLowGainFlag){
         fSampleParamsLow->AddAt(pedestal,4) ;
         if(fOverflow)
           fSampleParamsLow->AddAt(double(maxAmp),5) ;
         else
           fSampleParamsLow->AddAt(double(1023),5) ;
         fSampleParamsLow->AddAt(double(iBin),6) ;
         fToFit->AddFirst((TObject*)fSampleParamsLow) ; 
         b=fSampleParamsLow->At(2) ;
         bmin=0.5 ;
         bmax=10. ;
       }
       else{
         fSampleParamsHigh->AddAt(pedestal,4) ;
         if(fOverflow)
           fSampleParamsHigh->AddAt(double(maxAmp),5) ;
         else
           fSampleParamsHigh->AddAt(double(1023),5);
         fSampleParamsHigh->AddAt(double(iBin),6);
         fToFit->AddFirst((TObject*)fSampleParamsHigh) ; 
         b=fSampleParamsHigh->At(2) ;
         bmin=0.05 ;
         bmax=0.4 ;
        }
        fToFit->AddLast((TObject*)fSamples) ;
        fToFit->AddLast((TObject*)fTimes) ;

	gMinuit->SetObjectFit((TObject*)fToFit) ;         // To tranfer pointer to UnfoldingChiSquare
	Int_t ierflg ;
	gMinuit->mnparm(0, "t0",  1.*tStart, 0.01, -500., 500., ierflg) ;
	if(ierflg != 0){
//	  AliWarning(Form("Unable to set initial value for fit procedure : t0=%e\n",1.*tStart) ) ;
	  fEnergy=0. ;
	  fTime=-999. ;
          fQuality=999 ;
	  return kTRUE ; //will scan further
	}
        Double_t amp0; 
        if(fLowGainFlag)
          amp0=fEnergy/sampleMaxLG;
        else
          amp0=fEnergy/sampleMaxHG;

	gMinuit->mnparm(1, "Energy", amp0 , 0.01*amp0, 0, 0, ierflg) ;
	if(ierflg != 0){
//	  AliWarning(Form("Unable to set initial value for fit procedure : E=%e\n", amp0)) ;
	  fEnergy=0. ;
	  fTime=-999. ;
          fQuality=999 ;
	  return kTRUE ; //will scan further
	}

        gMinuit->mnparm(2, "p2", b, 0.01*b, bmin, bmax, ierflg) ;
        if(ierflg != 0){                                         
//        AliWarning(Form("Unable to set initial value for fit procedure : E=%e\n", amp0)) ;  
          fEnergy=0. ;           
          fTime=-999. ;         
          fQuality=999 ;       
          return kTRUE ; //will scan further  
        }             
 
	
	Double_t p0 = 0.0001 ; // "Tolerance" Evaluation stops when EDM = 0.0001*p0 ; The number of function call slightly
	//  depends on it. 
	Double_t p1 = 1.0 ;
	Double_t p2 = 0.0 ;
	gMinuit->mnexcm("SET STR", &p2, 0, ierflg) ;   // force TMinuit to reduce function calls  
	gMinuit->mnexcm("SET GRA", &p1, 1, ierflg) ;   // force TMinuit to use my gradient  
	//	gMinuit->SetMaxIterations(100);
	gMinuit->mnexcm("SET NOW", &p2 , 0, ierflg) ;  // No Warnings
	
	gMinuit->mnexcm("MIGRAD", &p0, 0, ierflg) ;    // minimize 
	
	Double_t err,t0err ;
	Double_t t0,efit ;
	gMinuit->GetParameter(0,t0, t0err) ;    
	gMinuit->GetParameter(1,efit, err) ;    

        Double_t bfit, berr ;
        gMinuit->GetParameter(2,bfit,berr) ;

        //Calculate total energy
        //this isparameterization of depetendence of pulse height on parameter b
        if(fLowGainFlag)
          efit*=99.54910 + 78.65038*bfit ;
        else
          efit*=80.33109+128.6433*bfit ;

        if(efit<0. || efit > 10000.){                                                                          
//set energy to previously found max
//          fEnergy=0 ; //bad sample                                                    
          fTime=-999.;                                                                
          fQuality=999 ;                                                              
          return kTRUE;
        }                                                                             
 
        //evaluate fit quality
	Double_t fmin,fedm,errdef ;
	Int_t npari,nparx,istat;
	gMinuit->mnstat(fmin,fedm,errdef,npari,nparx,istat) ;
        fQuality=fmin/(fSamples->GetSize()-iBin) ;
        //compare quality with some parameterization
        if(fLowGainFlag){
          fQuality/=2.+0.002*fEnergy ;
        }
        else{
          fQuality/=0.75+0.0025*fEnergy ;
        }

//Debug================
//        Double_t n,alpha,beta ;
//        Double_t en ;
//       if(fLowGainFlag){
//          n=fSampleParamsLow->At(0) ;
//          alpha=fSampleParamsLow->At(1) ;
//          beta=fSampleParamsLow->At(3) ;
//          en=efit/(99.54910 + 78.65038*bfit) ;
//        }
//        else{
//          n=fSampleParamsHigh->At(0) ;
//          alpha=fSampleParamsHigh->At(1) ;
//          beta=fSampleParamsHigh->At(3) ;
//          en=efit/(80.33109+128.6433*bfit) ;
//        }
//
////    if( fQuality > 1 && fEnergy > 20. && !fOverflow){
////    if(!fLowGainFlag && fRow==32 && fColumn==18){
//{
//    printf("Col=%d, row=%d, qual=%f, E=%f, t0=%f, b=%f\n",fColumn,fRow,fQuality,efit,t0,bfit) ;
//    printf("    Energy = %f \n",fEnergy) ;
//    TCanvas * c = new TCanvas("samp") ;
//    c->cd() ;
//    h->Draw() ;
//    if(fLowGainFlag){
//      fff->SetParameters(pedestal,en,t0,n,alpha,bfit,beta) ;
//    }
//    else{
//     fff->SetParameters(pedestal,en,t0,n,alpha,bfit,beta) ;
//    }
//////    for(Int_t i=1;i<=h->GetNbinsX(); i++){
////       Double_t x=h->GetBinCenter(i) ;
////       h->SetBinContent(i,h->GetBinContent(i)-fff->Eval(x)) ;
////    }
////    h->SetMinimum(-15.) ;
////    h->SetMaximum(15.) ;
//    h->Draw() ;
//    fff->Draw("same") ;
//    c->Update();
//    getchar() ;
//    }
//====================

      fEnergy=efit ;
      fTime=t0-4.024*bfit ; //-10.402*bfit+4.669*bfit*bfit ; //Correction for 70 samples
//      fTime=t0+2.8*bfit ; //-10.402*bfit+4.669*bfit*bfit ; //Correction for 50 samples
//      fQuality = bfit ;
      
      return kTRUE;
    }
    
    fLowGainFlag = in->IsLowGain();
    fModule = in->GetModule()+1;
    fRow    = in->GetRow()   +1;
    fColumn = in->GetColumn()+1;

    //add previouly taken if coincides
    if(fLowGainFlag==fNewLowGainFlag && fModule==fNewModule &&
       fRow==fNewRow && fColumn==fNewColumn){
       iBin--;                                                                                                                                
       if(fPedSubtract && fNewTime < nPreSamples) {                                                                                    
         pedMean += in->GetSignal();                                                                                                          
         pedRMS += in->GetSignal()*in->GetSignal() ;
         nPed++;                                                                                                                              
       }                                                                                                                                      
       fSamples->AddAt(fNewAmp,iBin);                                                                                                 
       fTimes->AddAt(fNewTime,iBin);                                                                                                     
    
       //Mark that we already take it
       fNewModule=-1 ;
    }
    
    // Fill array with samples
    iBin--;
    if(fPedSubtract && (in->GetTime() < nPreSamples)) {
      pedMean += in->GetSignal();
      pedRMS += in->GetSignal()*in->GetSignal() ;
      nPed++;
    }
    fSamples->AddAt(in->GetSignal(),iBin);
    fTimes->AddAt(in->GetTime(),iBin);
 
//Debug==============
//    h->SetBinContent(in->GetTime(),in->GetSignal()) ;
//EndDebug==============
    
  } // in.Next()
  
  return kFALSE;
}
//_____________________________________________________________________________
void AliPHOSRawDecoderv1::UnfoldingChiSquare(Int_t & /*nPar*/, Double_t * Grad, Double_t & fret, Double_t * x, Int_t iflag)
{
  // Number of parameters, Gradient, Chi squared, parameters, what to do

  TList * toFit= (TList*)gMinuit->GetObjectFit() ;
  TArrayD * params=(TArrayD*)toFit->At(0) ; 
  TArrayI * samples = (TArrayI*)toFit->At(1) ;
  TArrayI * times = (TArrayI*)toFit->At(2) ;

  fret = 0. ;     
  if(iflag == 2)
    for(Int_t iparam = 0 ; iparam < 3 ; iparam++)    
      Grad[iparam] = 0 ; // Will evaluate gradient
  
  Double_t t0=x[0] ;
  Double_t en=x[1] ;
  Double_t b=x[2] ;
  Double_t n=params->At(0) ;
  Double_t alpha=params->At(1) ;
  Double_t beta=params->At(3) ;
  Double_t ped=params->At(4) ;

  Double_t overflow=params->At(5) ;
  Int_t iBin = (Int_t) params->At(6) ;
  Int_t nSamples=TMath::Min(iBin+70,samples->GetSize()) ; //Here we set number of points to fit (70)
  // iBin - first non-zero sample 
  Int_t tStep=times->At(iBin+1)-times->At(iBin) ;
  Double_t ddt=times->At(iBin)-t0-tStep ;
  Double_t exp1=TMath::Exp(-alpha*ddt) ;
  Double_t exp2=TMath::Exp(-beta*ddt) ;
  Double_t dexp1=TMath::Exp(-alpha*tStep) ;
  Double_t dexp2=TMath::Exp(-beta*tStep) ;
  for(Int_t i = iBin; i<nSamples ; i++) {
    Double_t dt=double(times->At(i))-t0 ;
    Double_t fsample = double(samples->At(i)) ;
    if(fsample>=overflow)
      continue ;
    Double_t diff ;
    exp1*=dexp1 ;
    exp2*=dexp2 ;
    if(dt<=0.){
      diff=fsample - ped ; 
      fret += diff*diff ;
      continue ;
    }
    Double_t dtn=TMath::Power(dt,n) ;
    Double_t dtnE=dtn*exp1 ;
    Double_t dt2E=dt*dt*exp2 ;
    Double_t fit=ped+en*(dtnE + b*dt2E) ;
//    if(fit>=overflow){
//      diff=fsample-overflow ;
//      fret += diff*diff ;
//      //zero gradient here
//    }
//    else{
      diff = fsample - fit ;
      fret += diff*diff ;
      if(iflag == 2){  // calculate gradient
        Grad[0] += en*diff*(dtnE*(n/dt-alpha)+b*dt2E*(2./dt-beta))  ; //derivative over t0
        Grad[1] -= diff*(dtnE+b*dt2E) ;
        Grad[2] -= en*diff*dt2E ;
      }
//    }
  }
  if(iflag == 2)
    for(Int_t iparam = 0 ; iparam < 3 ; iparam++)    
      Grad[iparam] *= 2. ; 
}
//-----------------------------------------------------------------------------
Double_t AliPHOSRawDecoderv1::Gamma2(Double_t dt,Double_t en,Double_t b,TArrayD * params){  //Function for fitting samples
  //parameters:
  //dt-time after start
  //en-amplutude
  //function parameters
  
  Double_t ped=params->At(4) ;
  if(dt<0.)
    return ped ; //pedestal
  else
    return ped+en*(TMath::Power(dt,params->At(0))*TMath::Exp(-dt*params->At(1))+b*dt*dt*TMath::Exp(-dt*params->At(3))) ;
}
Commit	Line	Data
77ea1c6f	1	/**************************************************************************
	2	* Copyright(c) 2007, ALICE Experiment at CERN, All rights reserved. *
	3	* *
	4	* Author: The ALICE Off-line Project. *
	5	* Contributors are mentioned in the code where appropriate. *
	6	* *
	7	* Permission to use, copy, modify and distribute this software and its *
	8	* documentation strictly for non-commercial purposes is hereby granted *
	9	* without fee, provided that the above copyright notice appears in all *
	10	* copies and that both the copyright notice and this permission notice *
	11	* appear in the supporting documentation. The authors make no claims *
	12	* about the suitability of this software for any purpose. It is *
	13	* provided "as is" without express or implied warranty. *
	14	**************************************************************************/
	15
	16	/* $Id$ */
	17
	18	// This class decodes the stream of ALTRO samples to extract
	19	// the PHOS "digits" of current event. Uses fitting procedure
	20	// to separate reasonable samples
	21	//
	22	// Typical use case:
	23	// AliRawReader* rf = new AliRawReaderDate("2006run2211.raw");
	24	// AliPHOSRawDecoder dc(rf);
	25	// while (rf->NextEvent()) {
77ea1c6f	26	// dc.SubtractPedestals(kTRUE);
	27	// while ( dc.NextDigit() ) {
	28	// Int_t module = dc.GetModule();
	29	// Int_t column = dc.GetColumn();
	30	// Int_t row = dc.GetRow();
	31	// Double_t amplitude = dc.GetEnergy();
	32	// Double_t time = dc.GetTime();
	33	// Bool_t IsLowGain = dc.IsLowGain();
	34	// ..........
	35	// }
	36	// }
	37
	38	// Author: Dmitri Peressounko
	39
	40	// --- ROOT system ---
11f2ec15	41	#include "TList.h"
77ea1c6f	42	#include "TMath.h"
	43	#include "TMinuit.h"
	44
11f2ec15	45	#include "TCanvas.h"
	46	#include "TH1.h"
	47	#include "TH2.h"
	48	#include "TF1.h"
	49	#include "TROOT.h"
	50
77ea1c6f	51	// --- AliRoot header files ---
11f2ec15	52	//#include "AliLog.h"
77ea1c6f	53	#include "AliPHOSRawDecoderv1.h"
	54	#include "AliPHOSPulseGenerator.h"
	55
	56
	57	ClassImp(AliPHOSRawDecoderv1)
	58
	59	//-----------------------------------------------------------------------------
11f2ec15	60	AliPHOSRawDecoderv1::AliPHOSRawDecoderv1():AliPHOSRawDecoder(),
11f2ec15	61	fSampleParamsLow(0x0),fSampleParamsHigh(0x0),fToFit(0x0)
77ea1c6f	62	{
	63	//Default constructor.
	64	}
	65
	66	//-----------------------------------------------------------------------------
	67	AliPHOSRawDecoderv1::AliPHOSRawDecoderv1(AliRawReader* rawReader, AliAltroMapping **mapping):
11f2ec15	68	AliPHOSRawDecoder(rawReader,mapping),
11f2ec15	69	fSampleParamsLow(0x0),fSampleParamsHigh(0x0),fToFit(0x0)
77ea1c6f	70	{
	71	//Construct a decoder object.
	72	//Is is user responsibility to provide next raw event
	73	//using AliRawReader::NextEvent().
	74
	75	if(!gMinuit)
	76	gMinuit = new TMinuit(100);
70d93620	77	fSampleParamsHigh =new TArrayD(7) ;
	78	fSampleParamsHigh->AddAt(2.174,0) ;
	79	fSampleParamsHigh->AddAt(0.106,1) ;
	80	fSampleParamsHigh->AddAt(0.173,2) ;
	81	fSampleParamsHigh->AddAt(0.06106,3) ;
	82	//last two parameters are pedestal and overflow
	83	fSampleParamsLow=new TArrayD(7) ;
	84	fSampleParamsLow->AddAt(2.456,0) ;
	85	fSampleParamsLow->AddAt(0.137,1) ;
	86	fSampleParamsLow->AddAt(2.276,2) ;
	87	fSampleParamsLow->AddAt(0.08246,3) ;
11f2ec15	88	fToFit = new TList() ;
77ea1c6f	89	}
	90
	91	//-----------------------------------------------------------------------------
	92	AliPHOSRawDecoderv1::~AliPHOSRawDecoderv1()
	93	{
	94	//Destructor.
11f2ec15	95	if(fSampleParamsLow){
	96	delete fSampleParamsLow ;
	97	fSampleParamsLow=0 ;
	98	}
	99	if(fSampleParamsHigh){
	100	delete fSampleParamsHigh ;
	101	fSampleParamsHigh=0;
	102	}
	103	if(fToFit){
	104	delete fToFit ;
	105	fToFit=0 ;
	106	}
77ea1c6f	107	}
	108
	109	//-----------------------------------------------------------------------------
	110	AliPHOSRawDecoderv1::AliPHOSRawDecoderv1(const AliPHOSRawDecoderv1 &phosDecoder ):
11f2ec15	111	AliPHOSRawDecoder(phosDecoder),
11f2ec15	112	fSampleParamsLow(0x0),fSampleParamsHigh(0x0),fToFit(0x0)
77ea1c6f	113	{
77ea1c6f	114	//Copy constructor.
11f2ec15	115	fToFit = new TList() ;
	116	fSampleParamsLow =new TArrayD(*(phosDecoder.fSampleParamsLow)) ;
	117	fSampleParamsHigh=new TArrayD(*(phosDecoder.fSampleParamsHigh)) ;
77ea1c6f	118	}
	119
	120	//-----------------------------------------------------------------------------
11f2ec15	121	AliPHOSRawDecoderv1& AliPHOSRawDecoderv1::operator = (const AliPHOSRawDecoderv1 &phosDecoder)
77ea1c6f	122	{
	123	//Assignment operator.
	124
11f2ec15	125	// if(this != &phosDecoder) {
77ea1c6f	126	// }
11f2ec15	127	fToFit = new TList() ;
	128	if(fSampleParamsLow){
	129	fSampleParamsLow = phosDecoder.fSampleParamsLow ;
	130	fSampleParamsHigh= phosDecoder.fSampleParamsHigh ;
	131	}
	132	else{
	133	fSampleParamsLow =new TArrayD(*(phosDecoder.fSampleParamsLow)) ;
	134	fSampleParamsHigh=new TArrayD(*(phosDecoder.fSampleParamsHigh)) ;
	135	}
77ea1c6f	136	return *this;
	137	}
	138
	139	//-----------------------------------------------------------------------------
	140	Bool_t AliPHOSRawDecoderv1::NextDigit()
	141	{
	142	//Extract an energy deposited in the crystal,
	143	//crystal' position (module,column,row),
	144	//time and gain (high or low).
	145	//First collects sample, then evaluates it and if it has
	146	//reasonable shape, fits it with Gamma2 function and extracts
	147	//energy and time.
11f2ec15	148
70d93620	149	//Debug=====================
39569d36	150	// TCanvas * c = 0; //(TCanvas*)gROOT->FindObjectAny("CSample") ;
70d93620	151	// if(!c)
	152	// c = new TCanvas("CSample","CSample") ;
	153	//
39569d36	154	// TH1D * h = 0 ; //(TH1D*)gROOT->FindObjectAny("hSample") ;
70d93620	155	// if(!h)
	156	// h=new TH1D("hSample","",200,0.,200.) ;
	157	//
39569d36	158	// TF1 * fff = 0 ; //(TF1*)gROOT->FindObjectAny("fff") ;
70d93620	159	// if(!fff)
	160	// fff = new TF1("fff","[0]+[1]((abs(x-[2]))^[3]exp(-(x-[2])[4])+[5](x-[2])(x-[2])exp(-(x-[2])*[6]))",0.,1000.) ;
	161	//End debug===========
77ea1c6f	162
	163	AliCaloRawStream* in = fCaloStream;
	164
70d93620	165	Int_t iBin = fSamples->GetSize() ;
77ea1c6f	166	Int_t tLength = 0;
	167	fEnergy = -111;
	168	Float_t pedMean = 0;
3876e91d	169	Float_t pedRMS = 0;
77ea1c6f	170	Int_t nPed = 0;
	171	Float_t baseLine = 1.0;
	172	const Float_t nPreSamples = 10;
70d93620	173	fQuality= 999. ;
	174	const Float_t sampleMaxHG=102.332 ; //maximal height of HG sample with given parameterization
	175	const Float_t sampleMaxLG=277.196 ; //maximal height of HG sample with given parameterization
39569d36	176	const Float_t maxEtoFit=5 ; //fit only samples above this energy, accept all samples (with good aRMS) below it
1defa3f3	177
77ea1c6f	178	while ( in->Next() ) {
1defa3f3	179
77ea1c6f	180	if(!tLength) {
	181	tLength = in->GetTimeLength();
	182	if(tLength!=fSamples->GetSize()) {
	183	delete fSamples ;
70d93620	184	delete fTimes ;
77ea1c6f	185	fSamples = new TArrayI(tLength);
70d93620	186	fTimes = new TArrayI(tLength);
70d93620	187	iBin= fSamples->GetSize() ;
77ea1c6f	188	}
77ea1c6f	189	else{
70d93620	190	fSamples->Reset() ;
77ea1c6f	191	}
	192	}
	193
	194	// Fit the full sample
1defa3f3	195	if((in->IsNewHWAddress() && iBin != fSamples->GetSize()) //new HW address
1defa3f3	196	\|\|(iBin<=0)) { //or new signal in same address
39569d36	197
	198	//First remember new sample
	199	fNewLowGainFlag = in->IsLowGain();
	200	fNewModule = in->GetModule()+1;
	201	fNewRow = in->GetRow() +1;
	202	fNewColumn = in->GetColumn()+1;
	203	fNewAmp = in->GetSignal() ;
1defa3f3	204	fNewTime=in->GetTime() ;
1defa3f3	205
3876e91d	206	//now handle already collected
77ea1c6f	207	Double_t pedestal =0. ;
3876e91d	208	fPedestalRMS=0. ;
77ea1c6f	209	if(fPedSubtract){
3876e91d	210	if (nPed > 0){
77ea1c6f	211	pedestal = (Double_t)(pedMean/nPed);
3876e91d	212	fPedestalRMS=pedRMS/nPed-pedestal*pedestal ;
	213	if(fPedestalRMS>0.) fPedestalRMS=TMath::Sqrt(fPedestalRMS) ;
	214	}
77ea1c6f	215	else
	216	return kFALSE;
	217	}
70d93620	218
	219	//calculate time and energy
	220	Int_t maxBin=0 ;
	221	Int_t maxAmp=0 ;
	222	Double_t aMean=0. ;
	223	Double_t aRMS=0. ;
39569d36	224	Double_t wts=0 ;
70d93620	225	Int_t tStart = 0 ;
70d93620	226	for(Int_t i=iBin; i<fSamples->GetSize(); i++){
	227	if(fSamples->At(i)>0){
	228	Double_t de=fSamples->At(i)-pedestal ;
39569d36	229	if(de>1.){
	230	aMean+=de*i ;
	231	aRMS+=deii ;
	232	wts+=de;
	233	}
70d93620	234	if(de>2 && tStart==0)
	235	tStart=i ;
	236	if(maxAmp<fSamples->At(i)){
	237	maxBin=i ;
	238	maxAmp=fSamples->At(i) ;
	239	}
	240	}
	241	}
39569d36	242	if(maxBin==fSamples->GetSize()-1){//bad "rising" sample
70d93620	243	fEnergy=0. ;
	244	fTime=-999.;
	245	fQuality= 999. ;
	246	return kTRUE ;
	247	}
	248	fEnergy=Double_t(maxAmp)-pedestal ;
	249	fOverflow =0 ; //look for plato on the top of sample
	250	if(fEnergy>500 && //this is not fluctuation of soft sample
	251	maxBin<fSamples->GetSize()-1 && fSamples->At(maxBin+1)==maxAmp){ //and there is a plato
	252	fOverflow = kTRUE ;
77ea1c6f	253	}
70d93620	254
39569d36	255	if(wts>0){
	256	aMean/=wts;
	257	aRMS=aRMS/wts-aMean*aMean;
77ea1c6f	258	}
39569d36	259
	260	//do not take too small energies
	261	if(fEnergy < baseLine)
	262	fEnergy = 0;
	263
	264	//do not test quality of too soft samples
	265	if(fEnergy<maxEtoFit){
	266	fTime=fTimes->At(tStart);
	267	if(aRMS<2.) //sigle peak
	268	fQuality=999. ;
	269	else
	270	fQuality= 0. ;
	271	return kTRUE ;
	272	}
	273
77ea1c6f	274
70d93620	275	//Debug:=====Draw sample
70d93620	276	//if(fEnergy>pedestal+10.){
39569d36	277	//if(fLowGainFlag && fEnergy>2){
39569d36	278	// if(!c)
113139da	279	// if(!fLowGainFlag && fRow==32 && fColumn==18){
113139da	280	// TCanvas *c = new TCanvas("CSample","CSample") ;
70d93620	281	// c->cd() ;
	282	// h->Draw() ;
	283	// c->Update() ;
39569d36	284	// printf("fEnergy=%f, aRMS=%f \n",fEnergy,aRMS) ;
39569d36	285	//getchar() ;
70d93620	286	//}
	287	//======================
	288
77ea1c6f	289	//IF sample has reasonable mean and RMS, try to fit it with gamma2
77ea1c6f	290
	291	gMinuit->mncler(); // Reset Minuit's list of paramters
	292	gMinuit->SetPrintLevel(-1) ; // No Printout
	293	gMinuit->SetFCN(AliPHOSRawDecoderv1::UnfoldingChiSquare) ;
	294	// To set the address of the minimization function
11f2ec15	295
11f2ec15	296	fToFit->Clear() ;
113139da	297	Double_t b,bmin,bmax ;
11f2ec15	298	if(fLowGainFlag){
11f2ec15	299	fSampleParamsLow->AddAt(pedestal,4) ;
70d93620	300	if(fOverflow)
	301	fSampleParamsLow->AddAt(double(maxAmp),5) ;
	302	else
	303	fSampleParamsLow->AddAt(double(1023),5) ;
	304	fSampleParamsLow->AddAt(double(iBin),6) ;
11f2ec15	305	fToFit->AddFirst((TObject*)fSampleParamsLow) ;
113139da	306	b=fSampleParamsLow->At(2) ;
	307	bmin=0.5 ;
	308	bmax=10. ;
	309	}
	310	else{
11f2ec15	311	fSampleParamsHigh->AddAt(pedestal,4) ;
70d93620	312	if(fOverflow)
	313	fSampleParamsHigh->AddAt(double(maxAmp),5) ;
	314	else
	315	fSampleParamsHigh->AddAt(double(1023),5);
	316	fSampleParamsHigh->AddAt(double(iBin),6);
11f2ec15	317	fToFit->AddFirst((TObject*)fSampleParamsHigh) ;
113139da	318	b=fSampleParamsHigh->At(2) ;
	319	bmin=0.05 ;
	320	bmax=0.4 ;
11f2ec15	321	}
11f2ec15	322	fToFit->AddLast((TObject*)fSamples) ;
70d93620	323	fToFit->AddLast((TObject*)fTimes) ;
11f2ec15	324
11f2ec15	325	gMinuit->SetObjectFit((TObject*)fToFit) ; // To tranfer pointer to UnfoldingChiSquare
77ea1c6f	326	Int_t ierflg ;
1defa3f3	327	gMinuit->mnparm(0, "t0", 1.*tStart, 0.01, -500., 500., ierflg) ;
77ea1c6f	328	if(ierflg != 0){
11f2ec15	329	// AliWarning(Form("Unable to set initial value for fit procedure : t0=%e\n",1.*tStart) ) ;
77ea1c6f	330	fEnergy=0. ;
77ea1c6f	331	fTime=-999. ;
70d93620	332	fQuality=999 ;
77ea1c6f	333	return kTRUE ; //will scan further
77ea1c6f	334	}
70d93620	335	Double_t amp0;
	336	if(fLowGainFlag)
	337	amp0=fEnergy/sampleMaxLG;
	338	else
	339	amp0=fEnergy/sampleMaxHG;
11f2ec15	340
113139da	341	gMinuit->mnparm(1, "Energy", amp0 , 0.01*amp0, 0, 0, ierflg) ;
77ea1c6f	342	if(ierflg != 0){
11f2ec15	343	// AliWarning(Form("Unable to set initial value for fit procedure : E=%e\n", amp0)) ;
77ea1c6f	344	fEnergy=0. ;
77ea1c6f	345	fTime=-999. ;
70d93620	346	fQuality=999 ;
77ea1c6f	347	return kTRUE ; //will scan further
77ea1c6f	348	}
113139da	349
	350	gMinuit->mnparm(2, "p2", b, 0.01*b, bmin, bmax, ierflg) ;
	351	if(ierflg != 0){
	352	// AliWarning(Form("Unable to set initial value for fit procedure : E=%e\n", amp0)) ;
	353	fEnergy=0. ;
	354	fTime=-999. ;
	355	fQuality=999 ;
	356	return kTRUE ; //will scan further
	357	}
	358
77ea1c6f	359
11f2ec15	360	Double_t p0 = 0.0001 ; // "Tolerance" Evaluation stops when EDM = 0.0001*p0 ; The number of function call slightly
77ea1c6f	361	// depends on it.
	362	Double_t p1 = 1.0 ;
	363	Double_t p2 = 0.0 ;
	364	gMinuit->mnexcm("SET STR", &p2, 0, ierflg) ; // force TMinuit to reduce function calls
	365	gMinuit->mnexcm("SET GRA", &p1, 1, ierflg) ; // force TMinuit to use my gradient
	366	// gMinuit->SetMaxIterations(100);
	367	gMinuit->mnexcm("SET NOW", &p2 , 0, ierflg) ; // No Warnings
	368
	369	gMinuit->mnexcm("MIGRAD", &p0, 0, ierflg) ; // minimize
	370
11f2ec15	371	Double_t err,t0err ;
	372	Double_t t0,efit ;
	373	gMinuit->GetParameter(0,t0, t0err) ;
	374	gMinuit->GetParameter(1,efit, err) ;
11f2ec15	375
113139da	376	Double_t bfit, berr ;
	377	gMinuit->GetParameter(2,bfit,berr) ;
	378
70d93620	379	//Calculate total energy
113139da	380	//this isparameterization of depetendence of pulse height on parameter b
70d93620	381	if(fLowGainFlag)
113139da	382	efit=99.54910 + 78.65038bfit ;
70d93620	383	else
113139da	384	efit=80.33109+128.6433bfit ;
70d93620	385
70d93620	386	if(efit<0. \|\| efit > 10000.){
e6fe1709	387	//set energy to previously found max
b20d9db0	388	// fEnergy=0 ; //bad sample
70d93620	389	fTime=-999.;
	390	fQuality=999 ;
	391	return kTRUE;
	392	}
	393
	394	//evaluate fit quality
	395	Double_t fmin,fedm,errdef ;
	396	Int_t npari,nparx,istat;
	397	gMinuit->mnstat(fmin,fedm,errdef,npari,nparx,istat) ;
	398	fQuality=fmin/(fSamples->GetSize()-iBin) ;
	399	//compare quality with some parameterization
113139da	400	if(fLowGainFlag){
	401	fQuality/=2.+0.002*fEnergy ;
	402	}
	403	else{
	404	fQuality/=0.75+0.0025*fEnergy ;
	405	}
70d93620	406
70d93620	407	//Debug================
113139da	408	// Double_t n,alpha,beta ;
e6fe1709	409	// Double_t en ;
e6fe1709	410	// if(fLowGainFlag){
70d93620	411	// n=fSampleParamsLow->At(0) ;
70d93620	412	// alpha=fSampleParamsLow->At(1) ;
70d93620	413	// beta=fSampleParamsLow->At(3) ;
e6fe1709	414	// en=efit/(99.54910 + 78.65038*bfit) ;
70d93620	415	// }
	416	// else{
	417	// n=fSampleParamsHigh->At(0) ;
	418	// alpha=fSampleParamsHigh->At(1) ;
70d93620	419	// beta=fSampleParamsHigh->At(3) ;
e6fe1709	420	// en=efit/(80.33109+128.6433*bfit) ;
70d93620	421	// }
70d93620	422	//
e6fe1709	423	//// if( fQuality > 1 && fEnergy > 20. && !fOverflow){
	424	//// if(!fLowGainFlag && fRow==32 && fColumn==18){
	425	//{
113139da	426	// printf("Col=%d, row=%d, qual=%f, E=%f, t0=%f, b=%f\n",fColumn,fRow,fQuality,efit,t0,bfit) ;
e6fe1709	427	// printf(" Energy = %f \n",fEnergy) ;
113139da	428	// TCanvas * c = new TCanvas("samp") ;
11f2ec15	429	// c->cd() ;
	430	// h->Draw() ;
	431	// if(fLowGainFlag){
e6fe1709	432	// fff->SetParameters(pedestal,en,t0,n,alpha,bfit,beta) ;
11f2ec15	433	// }
11f2ec15	434	// else{
e6fe1709	435	// fff->SetParameters(pedestal,en,t0,n,alpha,bfit,beta) ;
113139da	436	// }
e6fe1709	437	////// for(Int_t i=1;i<=h->GetNbinsX(); i++){
	438	//// Double_t x=h->GetBinCenter(i) ;
	439	//// h->SetBinContent(i,h->GetBinContent(i)-fff->Eval(x)) ;
	440	//// }
	441	//// h->SetMinimum(-15.) ;
	442	//// h->SetMaximum(15.) ;
113139da	443	// h->Draw() ;
11f2ec15	444	// fff->Draw("same") ;
11f2ec15	445	// c->Update();
70d93620	446	// getchar() ;
	447	// }
	448	//====================
11f2ec15	449
39569d36	450	fEnergy=efit ;
1defa3f3	451	fTime=t0-4.024bfit ; //-10.402bfit+4.669bfitbfit ; //Correction for 70 samples
	452	// fTime=t0+2.8bfit ; //-10.402bfit+4.669bfitbfit ; //Correction for 50 samples
	453	// fQuality = bfit ;
77ea1c6f	454
	455	return kTRUE;
	456	}
	457
	458	fLowGainFlag = in->IsLowGain();
77ea1c6f	459	fModule = in->GetModule()+1;
	460	fRow = in->GetRow() +1;
	461	fColumn = in->GetColumn()+1;
39569d36	462
	463	//add previouly taken if coincides
	464	if(fLowGainFlag==fNewLowGainFlag && fModule==fNewModule &&
	465	fRow==fNewRow && fColumn==fNewColumn){
	466	iBin--;
	467	if(fPedSubtract && fNewTime < nPreSamples) {
	468	pedMean += in->GetSignal();
3876e91d	469	pedRMS += in->GetSignal()*in->GetSignal() ;
39569d36	470	nPed++;
	471	}
	472	fSamples->AddAt(fNewAmp,iBin);
	473	fTimes->AddAt(fNewTime,iBin);
	474
	475	//Mark that we already take it
	476	fNewModule=-1 ;
	477	}
77ea1c6f	478
77ea1c6f	479	// Fill array with samples
70d93620	480	iBin--;
70d93620	481	if(fPedSubtract && (in->GetTime() < nPreSamples)) {
77ea1c6f	482	pedMean += in->GetSignal();
3876e91d	483	pedRMS += in->GetSignal()*in->GetSignal() ;
77ea1c6f	484	nPed++;
77ea1c6f	485	}
70d93620	486	fSamples->AddAt(in->GetSignal(),iBin);
	487	fTimes->AddAt(in->GetTime(),iBin);
	488
	489	//Debug==============
e6fe1709	490	// h->SetBinContent(in->GetTime(),in->GetSignal()) ;
e6fe1709	491	//EndDebug==============
77ea1c6f	492
	493	} // in.Next()
	494
	495	return kFALSE;
	496	}
	497	//_____________________________________________________________________________
	498	void AliPHOSRawDecoderv1::UnfoldingChiSquare(Int_t & /nPar/, Double_t * Grad, Double_t & fret, Double_t * x, Int_t iflag)
	499	{
77ea1c6f	500	// Number of parameters, Gradient, Chi squared, parameters, what to do
77ea1c6f	501
11f2ec15	502	TList * toFit= (TList*)gMinuit->GetObjectFit() ;
	503	TArrayD * params=(TArrayD*)toFit->At(0) ;
	504	TArrayI * samples = (TArrayI*)toFit->At(1) ;
70d93620	505	TArrayI * times = (TArrayI*)toFit->At(2) ;
77ea1c6f	506
	507	fret = 0. ;
	508	if(iflag == 2)
113139da	509	for(Int_t iparam = 0 ; iparam < 3 ; iparam++)
77ea1c6f	510	Grad[iparam] = 0 ; // Will evaluate gradient
77ea1c6f	511
11f2ec15	512	Double_t t0=x[0] ;
11f2ec15	513	Double_t en=x[1] ;
113139da	514	Double_t b=x[2] ;
70d93620	515	Double_t n=params->At(0) ;
11f2ec15	516	Double_t alpha=params->At(1) ;
11f2ec15	517	Double_t beta=params->At(3) ;
113139da	518	Double_t ped=params->At(4) ;
	519
	520	Double_t overflow=params->At(5) ;
70d93620	521	Int_t iBin = (Int_t) params->At(6) ;
70d93620	522	Int_t nSamples=TMath::Min(iBin+70,samples->GetSize()) ; //Here we set number of points to fit (70)
e6fe1709	523	// iBin - first non-zero sample
113139da	524	Int_t tStep=times->At(iBin+1)-times->At(iBin) ;
e6fe1709	525	Double_t ddt=times->At(iBin)-t0-tStep ;
113139da	526	Double_t exp1=TMath::Exp(-alpha*ddt) ;
	527	Double_t exp2=TMath::Exp(-beta*ddt) ;
	528	Double_t dexp1=TMath::Exp(-alpha*tStep) ;
	529	Double_t dexp2=TMath::Exp(-beta*tStep) ;
	530	for(Int_t i = iBin; i<nSamples ; i++) {
113139da	531	Double_t dt=double(times->At(i))-t0 ;
e6fe1709	532	Double_t fsample = double(samples->At(i)) ;
1defa3f3	533	if(fsample>=overflow)
1defa3f3	534	continue ;
113139da	535	Double_t diff ;
e6fe1709	536	exp1*=dexp1 ;
e6fe1709	537	exp2*=dexp2 ;
1defa3f3	538	if(dt<=0.){
113139da	539	diff=fsample - ped ;
113139da	540	fret += diff*diff ;
77ea1c6f	541	continue ;
113139da	542	}
113139da	543	Double_t dtn=TMath::Power(dt,n) ;
	544	Double_t dtnE=dtn*exp1 ;
	545	Double_t dt2E=dtdtexp2 ;
	546	Double_t fit=ped+en(dtnE + bdt2E) ;
1defa3f3	547	// if(fit>=overflow){
	548	// diff=fsample-overflow ;
	549	// fret += diff*diff ;
	550	// //zero gradient here
	551	// }
	552	// else{
113139da	553	diff = fsample - fit ;
	554	fret += diff*diff ;
	555	if(iflag == 2){ // calculate gradient
	556	Grad[0] += endiff(dtnE(n/dt-alpha)+bdt2E*(2./dt-beta)) ; //derivative over t0
	557	Grad[1] -= diff(dtnE+bdt2E) ;
	558	Grad[2] -= endiffdt2E ;
77ea1c6f	559	}
1defa3f3	560	// }
77ea1c6f	561	}
113139da	562	if(iflag == 2)
	563	for(Int_t iparam = 0 ; iparam < 3 ; iparam++)
	564	Grad[iparam] *= 2. ;
77ea1c6f	565	}
77ea1c6f	566	//-----------------------------------------------------------------------------
113139da	567	Double_t AliPHOSRawDecoderv1::Gamma2(Double_t dt,Double_t en,Double_t b,TArrayD * params){ //Function for fitting samples
77ea1c6f	568	//parameters:
11f2ec15	569	//dt-time after start
77ea1c6f	570	//en-amplutude
11f2ec15	571	//function parameters
	572
	573	Double_t ped=params->At(4) ;
77ea1c6f	574	if(dt<0.)
11f2ec15	575	return ped ; //pedestal
77ea1c6f	576	else
113139da	577	return ped+en(TMath::Power(dt,params->At(0))TMath::Exp(-dtparams->At(1))+bdtdtTMath::Exp(-dt*params->At(3))) ;
77ea1c6f	578	}
77ea1c6f	579