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ed228cbc | 1 | /*************************************************************************** |
2 | * Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. * | |
3 | * * | |
4 | * Author: The ALICE Off-line Project. * | |
5 | * Contributors are mentioned in the code where appropriate. * | |
6 | * * | |
7 | * Permission to use, copy, modify and distribute this software and its * | |
8 | * documentation strictly for non-commercial purposes is hereby granted * | |
9 | * without fee, provided that the above copyright notice appears in all * | |
10 | * copies and that both the copyright notice and this permission notice * | |
11 | * appear in the supporting documentation. The authors make no claims * | |
12 | * about the suitability of this software for any purpose. It is * | |
13 | * provided "as is" without express or implied warranty. * | |
14 | **************************************************************************/ | |
15 | ||
deb0fc73 | 16 | //-----------------------------------------------------// |
17 | // // | |
18 | // Source File : PMDClustering.cxx, Version 00 // | |
19 | // // | |
20 | // Date : September 26 2002 // | |
21 | // // | |
22 | // clustering code for alice pmd // | |
23 | // // | |
24 | //-----------------------------------------------------// | |
25 | ||
e1287360 | 26 | /* -------------------------------------------------------------------- |
27 | Code developed by S. C. Phatak, Institute of Physics, | |
deb0fc73 | 28 | Bhubaneswar 751 005 ( phatak@iopb.res.in ) Given the energy deposited |
29 | ( or ADC value ) in each cell of supermodule ( pmd or cpv ), the code | |
e1287360 | 30 | builds up superclusters and breaks them into clusters. The input is |
a918d77a | 31 | in array fEdepCell[kNDIMX][kNDIMY] and cluster information is in array |
e1287360 | 32 | fClusters[5][5000]. integer fClno gives total number of clusters in the |
deb0fc73 | 33 | supermodule. |
34 | ||
a918d77a | 35 | fEdepCell, fClno and fClusters are the only global ( public ) variables. |
e1287360 | 36 | Others are local ( private ) to the code. |
deb0fc73 | 37 | At the moment, the data is read for whole detector ( all supermodules |
38 | and pmd as well as cpv. This will have to be modify later ) | |
deb0fc73 | 39 | LAST UPDATE : October 23, 2002 |
e1287360 | 40 | -----------------------------------------------------------------------*/ |
deb0fc73 | 41 | |
a918d77a | 42 | #include "Riostream.h" |
deb0fc73 | 43 | #include <TNtuple.h> |
44 | #include <TObjArray.h> | |
deb0fc73 | 45 | #include "AliPMDcluster.h" |
46 | #include "AliPMDClustering.h" | |
47 | #include <stdio.h> | |
48 | ||
49 | ClassImp(AliPMDClustering) | |
50 | ||
a918d77a | 51 | const Double_t AliPMDClustering::fgkSqroot3by2=0.8660254; // sqrt(3.)/2. |
a854e5de | 52 | |
afef6247 | 53 | AliPMDClustering::AliPMDClustering(): |
54 | fDebug(0), | |
55 | fCutoff(0.0) | |
deb0fc73 | 56 | { |
a918d77a | 57 | for(int i = 0; i < kNDIMX; i++) |
deb0fc73 | 58 | { |
a918d77a | 59 | for(int j = 0; j < kNDIMY; j++) |
deb0fc73 | 60 | { |
a918d77a | 61 | fCoord[0][i][j] = i+j/2.; |
62 | fCoord[1][i][j] = fgkSqroot3by2*j; | |
deb0fc73 | 63 | } |
64 | } | |
65 | } | |
afef6247 | 66 | // ------------------------------------------------------------------------ // |
deb0fc73 | 67 | AliPMDClustering::~AliPMDClustering() |
68 | { | |
69 | ||
70 | } | |
afef6247 | 71 | // ------------------------------------------------------------------------ // |
72 | void AliPMDClustering::DoClust(Int_t idet, Int_t ismn, Double_t celladc[48][96], TObjArray *pmdcont) | |
deb0fc73 | 73 | { |
a918d77a | 74 | // main function to call other necessary functions to do clustering |
75 | // | |
deb0fc73 | 76 | AliPMDcluster *pmdcl = 0; |
e1287360 | 77 | /* |
78 | int id and jd defined to read the input data. | |
79 | It is assumed that for data we have 0 <= id <= 48 | |
80 | and 0 <= jd <=96 | |
81 | */ | |
82 | int i, i1, i2, j, nmx1, incr, id, jd; | |
deb0fc73 | 83 | double cutoff, ave; |
afef6247 | 84 | Float_t clusdata[7]; |
deb0fc73 | 85 | |
a918d77a | 86 | const float ktwobysqrt3 = 1.1547; // 2./sqrt(3.) |
deb0fc73 | 87 | |
e1287360 | 88 | for (id = 0; id < kNDIMXr; id++) |
deb0fc73 | 89 | { |
e1287360 | 90 | for (jd = 0; jd < kNDIMYr; jd++) |
deb0fc73 | 91 | { |
e1287360 | 92 | j=jd; |
93 | i=id+(kNDIMYr/2-1)-(jd/2); | |
94 | fEdepCell[i][j] = celladc[id][jd]; | |
deb0fc73 | 95 | } |
96 | } | |
a918d77a | 97 | Order(); // order the data |
e1287360 | 98 | cutoff = fCutoff; // cutoff used to discard cells having ener. dep. |
99 | ave=0.; | |
deb0fc73 | 100 | nmx1=-1; |
e1287360 | 101 | |
a918d77a | 102 | for(j=0;j<kNMX; j++) |
deb0fc73 | 103 | { |
a918d77a | 104 | i1 = fIord[0][j]; |
105 | i2 = fIord[1][j]; | |
106 | if (fEdepCell[i1][i2] > 0.) {ave = ave + fEdepCell[i1][i2];} | |
107 | if (fEdepCell[i1][i2] > cutoff ) nmx1 = nmx1 + 1; | |
deb0fc73 | 108 | } |
109 | // nmx1 --- number of cells having ener dep >= cutoff | |
ed228cbc | 110 | if (fDebug == 1) |
deb0fc73 | 111 | { |
112 | cout << " nmx1 " << nmx1 << endl; | |
113 | } | |
afef6247 | 114 | |
115 | // if (nmx1 == 0 | nmx1 == -1) return; | |
116 | ||
0b0a1591 | 117 | if (nmx1 == 0) nmx1 = 1; |
deb0fc73 | 118 | ave=ave/nmx1; |
ed228cbc | 119 | if (fDebug == 1) |
deb0fc73 | 120 | { |
a918d77a | 121 | cout <<"kNMX " << kNMX << " nmx1 " << nmx1<< " ave "<<ave<< |
deb0fc73 | 122 | " cutoff " << cutoff << endl; |
123 | } | |
e1287360 | 124 | |
a918d77a | 125 | incr = CrClust(ave, cutoff, nmx1); |
a918d77a | 126 | RefClust(incr); |
ed228cbc | 127 | if (fDebug == 1) |
deb0fc73 | 128 | { |
a918d77a | 129 | cout << "fClno " << fClno << endl; |
deb0fc73 | 130 | } |
e1287360 | 131 | |
afef6247 | 132 | for(i1=0; i1<=fClno; i1++) |
deb0fc73 | 133 | { |
a918d77a | 134 | Float_t cluXC = (Float_t) fClusters[0][i1]; |
135 | Float_t cluYC = (Float_t) fClusters[1][i1]; | |
136 | Float_t cluADC = (Float_t) fClusters[2][i1]; | |
137 | Float_t cluCELLS = (Float_t) fClusters[3][i1]; | |
138 | Float_t cluRAD = (Float_t) fClusters[4][i1]; | |
139 | Float_t cluY0 = ktwobysqrt3*cluYC; | |
140 | Float_t cluX0 = cluXC - cluY0/2.; | |
e1287360 | 141 | // |
142 | // Cluster X centroid is back transformed | |
143 | // | |
144 | clusdata[0] = cluX0 - (48-1) + cluY0/2.; | |
a918d77a | 145 | clusdata[1] = cluY0; |
146 | clusdata[2] = cluADC; | |
147 | clusdata[3] = cluCELLS; | |
148 | clusdata[4] = cluRAD; | |
e1287360 | 149 | |
afef6247 | 150 | pmdcl = new AliPMDcluster(idet, ismn, clusdata); |
deb0fc73 | 151 | pmdcont->Add(pmdcl); |
152 | } | |
deb0fc73 | 153 | } |
afef6247 | 154 | // ------------------------------------------------------------------------ // |
a918d77a | 155 | void AliPMDClustering::Order() |
deb0fc73 | 156 | { |
a918d77a | 157 | // Sorting algorithm |
158 | // sorts the ADC values from higher to lower | |
159 | // | |
160 | double dd[kNMX], adum; | |
e1287360 | 161 | // matrix fEdepCell converted into |
deb0fc73 | 162 | // one dimensional array dd. adum a place holder for double |
a918d77a | 163 | int i, j, i1, i2, iord1[kNMX], itst, idum; |
e1287360 | 164 | // information of |
deb0fc73 | 165 | // ordering is stored in iord1, original array not ordered |
166 | // | |
167 | // define arrays dd and iord1 | |
a918d77a | 168 | for(i1=0; i1 < kNDIMX; i1++) |
169 | { | |
170 | for(i2=0; i2 < kNDIMY; i2++) | |
171 | { | |
172 | i = i1 + i2*kNDIMX; | |
173 | iord1[i] = i; | |
174 | dd[i] = fEdepCell[i1][i2]; | |
175 | } | |
deb0fc73 | 176 | } |
e1287360 | 177 | // sort and store sorting information in iord1 |
a918d77a | 178 | for(j=1; j < kNMX; j++) |
179 | { | |
180 | itst = 0; | |
181 | adum = dd[j]; | |
182 | idum = iord1[j]; | |
183 | for(i1=0; i1 < j ; i1++) | |
184 | { | |
185 | if(adum > dd[i1] && itst == 0) | |
186 | { | |
187 | itst = 1; | |
188 | for(i2=j-1; i2 >= i1 ; i2=i2--) | |
189 | { | |
e1287360 | 190 | dd[i2+1] = dd[i2]; |
a918d77a | 191 | iord1[i2+1] = iord1[i2]; |
192 | } | |
193 | dd[i1] = adum; | |
194 | iord1[i1] = idum; | |
195 | } | |
deb0fc73 | 196 | } |
deb0fc73 | 197 | } |
a918d77a | 198 | // store the sorted information in fIord for later use |
199 | for(i=0; i<kNMX; i++) | |
200 | { | |
201 | j = iord1[i]; | |
e1287360 | 202 | i2 = j/kNDIMX; |
203 | i1 = j-i2*kNDIMX; | |
204 | fIord[0][i]=i1; | |
a918d77a | 205 | fIord[1][i]=i2; |
206 | } | |
deb0fc73 | 207 | } |
afef6247 | 208 | // ------------------------------------------------------------------------ // |
a918d77a | 209 | int AliPMDClustering::CrClust(double ave, double cutoff, int nmx1) |
ed228cbc | 210 | { |
a918d77a | 211 | // Does crude clustering |
212 | // Finds out only the big patch by just searching the | |
213 | // connected cells | |
214 | // | |
ed228cbc | 215 | int i,j,k,id1,id2,icl, numcell, clust[2][5000]; |
216 | int jd1,jd2, icell, cellcount; | |
217 | static int neibx[6]={1,0,-1,-1,0,1}, neiby[6]={0,1,1,0,-1,-1}; | |
e1287360 | 218 | // neibx and neiby define ( incremental ) (i,j) for the neighbours of a |
ed228cbc | 219 | // cell. There are six neighbours. |
220 | // cellcount --- total number of cells having nonzero ener dep | |
221 | // numcell --- number of cells in a given supercluster | |
a918d77a | 222 | // ofstream ofl0("cells_loc",ios::out); |
e1287360 | 223 | // initialize fInfocl[2][kNDIMX][kNDIMY] |
ed228cbc | 224 | |
225 | if (fDebug == 1) | |
226 | { | |
a918d77a | 227 | printf(" *** Inside CrClust ** kNMX = %d nmx1 = %d kNDIMX = %d kNDIMY = %d ave = %f cutoff = %f\n", |
228 | kNMX,nmx1,kNDIMX,kNDIMY,ave,cutoff); | |
ed228cbc | 229 | } |
a918d77a | 230 | for (j=0; j < kNDIMX; j++){ |
231 | for(k=0; k < kNDIMY; k++){ | |
e1287360 | 232 | fInfocl[0][j][k] = 0; |
a918d77a | 233 | fInfocl[1][j][k] = 0; |
ed228cbc | 234 | } |
235 | } | |
a918d77a | 236 | for(i=0; i < kNMX; i++){ |
237 | fInfcl[0][i] = -1; | |
e1287360 | 238 | id1=fIord[0][i]; |
a918d77a | 239 | id2=fIord[1][i]; |
240 | if(fEdepCell[id1][id2] <= cutoff){fInfocl[0][id1][id2]=-1;} | |
ed228cbc | 241 | } |
242 | // --------------------------------------------------------------- | |
e1287360 | 243 | // crude clustering begins. Start with cell having largest adc |
ed228cbc | 244 | // count and loop over the cells in descending order of adc count |
245 | // --------------------------------------------------------------- | |
246 | icl=-1; | |
247 | cellcount=-1; | |
248 | for(icell=0; icell <= nmx1; icell++){ | |
e1287360 | 249 | id1=fIord[0][icell]; |
250 | id2=fIord[1][icell]; | |
a918d77a | 251 | if(fInfocl[0][id1][id2] == 0 ){ |
ed228cbc | 252 | // --------------------------------------------------------------- |
e1287360 | 253 | // icl -- cluster #, numcell -- # of cells in it, clust -- stores |
254 | // coordinates of the cells in a cluster, fInfocl[0][i1][i2] is 1 for | |
255 | // primary and 2 for secondary cells, | |
a918d77a | 256 | // fInfocl[1][i1][i2] stores cluster # |
ed228cbc | 257 | // --------------------------------------------------------------- |
e1287360 | 258 | icl=icl+1; |
259 | numcell=0; | |
260 | cellcount = cellcount + 1; | |
261 | fInfocl[0][id1][id2]=1; | |
a918d77a | 262 | fInfocl[1][id1][id2]=icl; |
e1287360 | 263 | fInfcl[0][cellcount]=icl; |
264 | fInfcl[1][cellcount]=id1; | |
a918d77a | 265 | fInfcl[2][cellcount]=id2; |
ed228cbc | 266 | |
ed228cbc | 267 | clust[0][numcell]=id1; |
268 | clust[1][numcell]=id2; | |
269 | for(i=1; i<5000; i++)clust[0][i]=0; | |
270 | // --------------------------------------------------------------- | |
271 | // check for adc count in neib. cells. If ne 0 put it in this clust | |
272 | // --------------------------------------------------------------- | |
273 | for(i=0; i<6; i++){ | |
e1287360 | 274 | jd1=id1+neibx[i]; |
ed228cbc | 275 | jd2=id2+neiby[i]; |
e1287360 | 276 | if( (jd1 >= 0 && jd1 < kNDIMX) && (jd2 >= 0 && jd2 < kNDIMY) && |
a918d77a | 277 | fInfocl[0][jd1][jd2] == 0){ |
ed228cbc | 278 | numcell=numcell+1; |
e1287360 | 279 | fInfocl[0][jd1][jd2]=2; |
a918d77a | 280 | fInfocl[1][jd1][jd2]=icl; |
ed228cbc | 281 | clust[0][numcell]=jd1; |
282 | clust[1][numcell]=jd2; | |
283 | cellcount=cellcount+1; | |
e1287360 | 284 | fInfcl[0][cellcount]=icl; |
285 | fInfcl[1][cellcount]=jd1; | |
a918d77a | 286 | fInfcl[2][cellcount]=jd2; |
ed228cbc | 287 | } |
288 | } | |
289 | // --------------------------------------------------------------- | |
e1287360 | 290 | // check adc count for neighbour's neighbours recursively and |
ed228cbc | 291 | // if nonzero, add these to the cluster. |
292 | // --------------------------------------------------------------- | |
293 | for(i=1;i < 5000;i++){ | |
294 | if(clust[0][i] != 0){ | |
e1287360 | 295 | id1=clust[0][i]; |
ed228cbc | 296 | id2=clust[1][i]; |
297 | for(j=0; j<6 ; j++){ | |
e1287360 | 298 | jd1=id1+neibx[j]; |
ed228cbc | 299 | jd2=id2+neiby[j]; |
e1287360 | 300 | if( (jd1 >= 0 && jd1 < kNDIMX) && (jd2 >= 0 && jd2 < kNDIMY) && |
a918d77a | 301 | fInfocl[0][jd1][jd2] == 0 ){ |
e1287360 | 302 | fInfocl[0][jd1][jd2] = 2; |
a918d77a | 303 | fInfocl[1][jd1][jd2] = icl; |
e1287360 | 304 | numcell = numcell + 1; |
a918d77a | 305 | clust[0][numcell] = jd1; |
306 | clust[1][numcell] = jd2; | |
307 | cellcount = cellcount+1; | |
e1287360 | 308 | fInfcl[0][cellcount] = icl; |
309 | fInfcl[1][cellcount] = jd1; | |
a918d77a | 310 | fInfcl[2][cellcount] = jd2; |
ed228cbc | 311 | } |
312 | } | |
313 | } | |
314 | } | |
315 | } | |
316 | } | |
317 | // for(icell=0; icell<=cellcount; icell++){ | |
e1287360 | 318 | // ofl0 << fInfcl[0][icell] << " " << fInfcl[1][icell] << " " << |
a918d77a | 319 | // fInfcl[2][icell] << endl; |
ed228cbc | 320 | // } |
321 | return cellcount; | |
322 | } | |
afef6247 | 323 | // ------------------------------------------------------------------------ // |
a918d77a | 324 | void AliPMDClustering::RefClust(int incr) |
deb0fc73 | 325 | { |
a918d77a | 326 | // Does the refining of clusters |
327 | // Takes the big patch and does gaussian fitting and | |
328 | // finds out the more refined clusters | |
329 | // | |
e1287360 | 330 | int i, j, k, i1, i2, id, icl, ncl[4500], iord[4500], itest; |
deb0fc73 | 331 | int ihld; |
332 | int ig, nsupcl, lev1[20], lev2[20]; | |
333 | double x[4500], y[4500], z[4500], x1, y1, z1, x2, y2, z2, dist; | |
334 | double xc[4500], yc[4500], zc[4500], cells[4500], sum, rc[4500], rr; | |
a918d77a | 335 | // fClno counts the final clusters |
deb0fc73 | 336 | // nsupcl = # of superclusters; ncl[i]= # of cells in supercluster i |
337 | // x, y and z store (x,y) coordinates of and energy deposited in a cell | |
338 | // xc, yc store (x,y) coordinates of the cluster center | |
339 | // zc stores the energy deposited in a cluster | |
340 | // rc is cluster radius | |
341 | // finally the cluster information is put in 2-dimensional array clusters | |
a918d77a | 342 | // ofstream ofl1("checking.5",ios::app); |
343 | fClno = -1; | |
344 | nsupcl = -1; | |
deb0fc73 | 345 | for(i=0; i<4500; i++){ncl[i]=-1;} |
346 | for(i=0; i<incr; i++){ | |
a918d77a | 347 | if(fInfcl[0][i] != nsupcl){ nsupcl=nsupcl+1; } |
deb0fc73 | 348 | ncl[nsupcl]=ncl[nsupcl]+1; |
349 | } | |
ed228cbc | 350 | if (fDebug == 1) |
deb0fc73 | 351 | { |
352 | cout << " # of cells " <<incr+1 << " # of superclusters " << nsupcl+1 | |
353 | << endl; | |
354 | } | |
355 | id=-1; | |
356 | icl=-1; | |
357 | for(i=0; i<nsupcl; i++){ | |
e1287360 | 358 | if(ncl[i] == 0){ |
359 | id=id+1; | |
deb0fc73 | 360 | icl=icl+1; |
361 | // one cell super-clusters --> single cluster | |
362 | // cluster center at the centyer of the cell | |
363 | // cluster radius = half cell dimension | |
e1287360 | 364 | fClno = fClno + 1; |
365 | i1 = fInfcl[1][id]; | |
a918d77a | 366 | i2 = fInfcl[2][id]; |
e1287360 | 367 | fClusters[0][fClno] = fCoord[0][i1][i2]; |
a918d77a | 368 | fClusters[1][fClno] = fCoord[1][i1][i2]; |
e1287360 | 369 | fClusters[2][fClno] = fEdepCell[i1][i2]; |
370 | fClusters[3][fClno] = 1.; | |
a918d77a | 371 | fClusters[4][fClno] = 0.5; |
e1287360 | 372 | //ofl1 << icl << " " << fCoord[0][i1][i2] << " " << fCoord[1][i1][i2] << |
373 | //" " << fEdepCell[i1][i2] << " " << fClusters[3][fClno] <<endl; | |
deb0fc73 | 374 | }else if(ncl[i] == 1){ |
375 | // two cell super-cluster --> single cluster | |
376 | // cluster center is at ener. dep.-weighted mean of two cells | |
377 | // cluster radius == half cell dimension | |
e1287360 | 378 | id = id + 1; |
a918d77a | 379 | icl = icl+1; |
e1287360 | 380 | fClno = fClno+1; |
381 | i1 = fInfcl[1][id]; | |
382 | i2 = fInfcl[2][id]; | |
a918d77a | 383 | x1 = fCoord[0][i1][i2]; |
e1287360 | 384 | y1 = fCoord[1][i1][i2]; |
a918d77a | 385 | z1 = fEdepCell[i1][i2]; |
e1287360 | 386 | id = id+1; |
387 | i1 = fInfcl[1][id]; | |
a918d77a | 388 | i2 = fInfcl[2][id]; |
e1287360 | 389 | x2 = fCoord[0][i1][i2]; |
390 | y2 = fCoord[1][i1][i2]; | |
a918d77a | 391 | z2 = fEdepCell[i1][i2]; |
e1287360 | 392 | fClusters[0][fClno] = (x1*z1+x2*z2)/(z1+z2); |
a918d77a | 393 | fClusters[1][fClno] = (y1*z1+y2*z2)/(z1+z2); |
e1287360 | 394 | fClusters[2][fClno] = z1+z2; |
395 | fClusters[3][fClno] = 2.; | |
a918d77a | 396 | fClusters[4][fClno] = 0.5; |
397 | //ofl1 << icl << " " << fClusters[0][fClno] << " " << fClusters[1][fClno] | |
e1287360 | 398 | // << " " << fClusters[2][fClno] << " " <<fClusters[3][fClno] <<endl; |
399 | } | |
400 | else{ | |
401 | id = id + 1; | |
a918d77a | 402 | iord[0] = 0; |
e1287360 | 403 | // super-cluster of more than two cells - broken up into smaller |
404 | // clusters gaussian centers computed. (peaks separated by > 1 cell) | |
deb0fc73 | 405 | // Begin from cell having largest energy deposited This is first |
406 | // cluster center | |
e1287360 | 407 | i1 = fInfcl[1][id]; |
a918d77a | 408 | i2 = fInfcl[2][id]; |
e1287360 | 409 | x[0] = fCoord[0][i1][i2]; |
410 | y[0] = fCoord[1][i1][i2]; | |
a918d77a | 411 | z[0] = fEdepCell[i1][i2]; |
412 | iord[0] = 0; | |
deb0fc73 | 413 | for(j=1;j<=ncl[i];j++){ |
ed228cbc | 414 | |
a918d77a | 415 | id = id + 1; |
e1287360 | 416 | i1 = fInfcl[1][id]; |
a918d77a | 417 | i2 = fInfcl[2][id]; |
418 | iord[j] = j; | |
e1287360 | 419 | x[j] = fCoord[0][i1][i2]; |
420 | y[j] = fCoord[1][i1][i2]; | |
a918d77a | 421 | z[j] = fEdepCell[i1][i2]; |
deb0fc73 | 422 | } |
e1287360 | 423 | // arranging cells within supercluster in decreasing order |
deb0fc73 | 424 | for(j=1;j<=ncl[i];j++){ |
a918d77a | 425 | itest=0; |
426 | ihld=iord[j]; | |
deb0fc73 | 427 | for(i1=0;i1<j;i1++){ |
428 | if(itest == 0 && z[iord[i1]] < z[ihld]){ | |
429 | itest=1; | |
430 | for(i2=j-1;i2>=i1;i2--){ | |
431 | iord[i2+1]=iord[i2]; | |
432 | } | |
433 | iord[i1]=ihld; | |
434 | } | |
435 | } | |
436 | } | |
ed228cbc | 437 | |
e1287360 | 438 | // compute the number of Gaussians and their centers ( first |
439 | // guess ) | |
deb0fc73 | 440 | // centers must be separated by cells having smaller ener. dep. |
441 | // neighbouring centers should be either strong or well-separated | |
442 | ig=0; | |
e1287360 | 443 | xc[ig]=x[iord[0]]; |
444 | yc[ig]=y[iord[0]]; | |
deb0fc73 | 445 | zc[ig]=z[iord[0]]; |
446 | for(j=1;j<=ncl[i];j++){ | |
e1287360 | 447 | itest=-1; |
448 | x1=x[iord[j]]; | |
deb0fc73 | 449 | y1=y[iord[j]]; |
450 | for(k=0;k<=ig;k++){ | |
e1287360 | 451 | x2=xc[k]; y2=yc[k]; |
a918d77a | 452 | rr=Distance(x1,y1,x2,y2); |
deb0fc73 | 453 | if( rr >= 1.1 && rr < 1.8 && z[iord[j]] > zc[k]/4.) |
454 | itest=itest+1; | |
455 | if( rr >= 1.8 && rr < 2.1 && z[iord[j]] > zc[k]/10.) | |
456 | itest=itest+1; | |
457 | if( rr >= 2.1)itest=itest+1; | |
e1287360 | 458 | } |
deb0fc73 | 459 | if(itest == ig){ |
e1287360 | 460 | ig=ig+1; |
461 | xc[ig]=x1; | |
462 | yc[ig]=y1; | |
deb0fc73 | 463 | zc[ig]=z[iord[j]]; |
464 | } | |
465 | } | |
466 | // for(j=0; j<=ig; j++){ | |
467 | //ofl1 << icl+j+1 << " " << xc[j] << " " <<yc[j] <<" "<<zc[j]<<endl; | |
468 | //} | |
a918d77a | 469 | // GaussFit to adjust cluster parameters to minimize |
470 | GaussFit(ncl[i], ig, x[0], y[0] ,z[0], xc[0], yc[0], zc[0], rc[0]); | |
deb0fc73 | 471 | icl=icl+ig+1; |
472 | // compute the number of cells belonging to each cluster. | |
e1287360 | 473 | // cell is shared between several clusters ( if they are equidistant |
deb0fc73 | 474 | // from it ) in the ratio of cluster energy deposition |
475 | for(j=0; j<=ig; j++){ | |
476 | cells[j]=0.; | |
477 | } | |
478 | if(ig > 0){ | |
479 | for(j=0; j<=ncl[i]; j++){ | |
e1287360 | 480 | lev1[0]=0; |
deb0fc73 | 481 | lev2[0]=0; |
482 | for(k=0; k<=ig; k++){ | |
a918d77a | 483 | dist=Distance(x[j], y[j], xc[k], yc[k]); |
deb0fc73 | 484 | if(dist < sqrt(3.) ){ |
e1287360 | 485 | lev1[0]++; |
486 | i1=lev1[0]; | |
deb0fc73 | 487 | lev1[i1]=k; |
488 | }else{ | |
489 | if(dist < 2.1){ | |
e1287360 | 490 | lev2[0]++; |
491 | i1=lev2[0]; | |
deb0fc73 | 492 | lev2[i1]=k; |
493 | } | |
494 | } | |
495 | } | |
496 | if(lev1[0] != 0){ | |
497 | if(lev1[0] == 1){cells[lev1[1]]=cells[lev1[1]]+1.;} | |
498 | else{ | |
499 | sum=0.; | |
500 | for(k=1; k<=lev1[0]; k++){ | |
501 | sum=sum+zc[lev1[k]]; | |
502 | } | |
503 | for(k=1; k<=lev1[0]; k++){ | |
504 | cells[lev1[k]]=cells[lev1[k]]+zc[lev1[k]]/sum; | |
505 | } | |
506 | } | |
507 | }else{ | |
508 | if(lev2[0] == 0){cells[lev2[1]]=cells[lev2[1]]+1.;} | |
509 | else{ | |
510 | sum=0.; | |
511 | for(k=1; k<=lev2[0]; k++){ | |
512 | sum=sum+zc[lev2[k]]; | |
513 | } | |
514 | for(k=1; k<=lev2[0]; k++){ | |
515 | cells[lev2[k]]=cells[lev2[k]]+zc[lev2[k]]/sum; | |
516 | } | |
517 | } | |
518 | } | |
519 | } | |
520 | } | |
521 | for(j=0; j<=ig; j++){ | |
e1287360 | 522 | fClno = fClno + 1; |
523 | fClusters[0][fClno] = xc[j]; | |
524 | fClusters[1][fClno] = yc[j]; | |
a918d77a | 525 | fClusters[2][fClno] = zc[j]; |
526 | fClusters[4][fClno] = rc[j]; | |
deb0fc73 | 527 | if(ig == 0){ |
a918d77a | 528 | fClusters[3][fClno] = ncl[i]; |
deb0fc73 | 529 | }else{ |
a918d77a | 530 | fClusters[3][fClno] = cells[j]; |
deb0fc73 | 531 | } |
532 | } | |
533 | } | |
534 | } | |
ed228cbc | 535 | } |
afef6247 | 536 | // ------------------------------------------------------------------------ // |
a918d77a | 537 | void AliPMDClustering::GaussFit(Int_t ncell, Int_t nclust, Double_t &x, Double_t &y ,Double_t &z, Double_t &xc, Double_t &yc, Double_t &zc, Double_t &rc) |
deb0fc73 | 538 | { |
a918d77a | 539 | // Does gaussian fitting |
540 | // | |
deb0fc73 | 541 | int i, j, i1, i2, jmax, novar, idd, jj; |
e1287360 | 542 | double xx[4500], yy[4500], zz[4500], xxc[4500], yyc[4500]; |
deb0fc73 | 543 | double a[4500], b[4500], c[4500], d[4500], ha[4500], hb[4500]; |
544 | double hc[4500], hd[4500], zzc[4500], rrc[4500]; | |
545 | int neib[4500][50]; | |
546 | double sum, dx, dy, str, str1, aint, sum1, rr, dum; | |
547 | double x1, x2, y1, y2; | |
e1287360 | 548 | str = 0.; |
549 | str1 = 0.; | |
550 | rr = 0.3; | |
a918d77a | 551 | novar = 0; |
deb0fc73 | 552 | j = 0; // Just put not to see the compiler warning, BKN |
553 | ||
a918d77a | 554 | for(i=0; i<=ncell; i++) |
555 | { | |
e1287360 | 556 | xx[i] = *(&x+i); |
557 | yy[i] = *(&y+i); | |
a918d77a | 558 | zz[i] = *(&z+i); |
559 | str = str + zz[i]; | |
560 | } | |
561 | for(i=0; i<=nclust; i++) | |
562 | { | |
e1287360 | 563 | xxc[i] = *(&xc+i); |
564 | yyc[i] = *(&yc+i); | |
565 | zzc[i] = *(&zc+i); | |
566 | str1 = str1 + zzc[i]; | |
a918d77a | 567 | rrc[i] = 0.5; |
568 | } | |
569 | for(i=0; i<=nclust; i++) | |
570 | { | |
571 | zzc[i] = str/str1*zzc[i]; | |
e1287360 | 572 | ha[i] = xxc[i]; |
573 | hb[i] = yyc[i]; | |
574 | hc[i] = zzc[i]; | |
a918d77a | 575 | hd[i] = rrc[i]; |
e1287360 | 576 | x1 = xxc[i]; |
a918d77a | 577 | y1 = yyc[i]; |
578 | } | |
deb0fc73 | 579 | for(i=0; i<=ncell; i++){ |
e1287360 | 580 | idd=0; |
581 | x1=xx[i]; | |
deb0fc73 | 582 | y1=yy[i]; |
583 | for(j=0; j<=nclust; j++){ | |
e1287360 | 584 | x2=xxc[j]; |
deb0fc73 | 585 | y2=yyc[j]; |
a918d77a | 586 | if(Distance(x1,y1,x2,y2) <= 3.){ idd=idd+1; neib[i][idd]=j; } |
deb0fc73 | 587 | } |
deb0fc73 | 588 | neib[i][0]=idd; |
589 | } | |
590 | sum=0.; | |
591 | for(i1=0; i1<=ncell; i1++){ | |
e1287360 | 592 | aint=0.; |
deb0fc73 | 593 | idd=neib[i1][0]; |
594 | for(i2=1; i2<=idd; i2++){ | |
595 | jj=neib[i1][i2]; | |
e1287360 | 596 | dx=xx[i1]-xxc[jj]; |
597 | dy=yy[i1]-yyc[jj]; | |
deb0fc73 | 598 | dum=rrc[j]*rrc[jj]+rr*rr; |
599 | aint=aint+exp(-(dx*dx+dy*dy)/dum)*zzc[idd]*rr*rr/dum; | |
600 | } | |
601 | sum=sum+(aint-zz[i1])*(aint-zz[i1])/str; | |
602 | } | |
e1287360 | 603 | jmax=nclust*1000; |
deb0fc73 | 604 | if(nclust > 20)jmax=20000; |
605 | for(j=0; j<jmax; j++){ | |
606 | str1=0.; | |
607 | for(i=0; i<=nclust; i++){ | |
e1287360 | 608 | a[i]=xxc[i]+0.6*(Ranmar()-0.5); |
a918d77a | 609 | b[i]=yyc[i]+0.6*(Ranmar()-0.5); |
e1287360 | 610 | c[i]=zzc[i]*(1.+(Ranmar()-0.5)*0.2); |
deb0fc73 | 611 | str1=str1+zzc[i]; |
a918d77a | 612 | d[i]=rrc[i]*(1.+(Ranmar()-0.5)*0.1); |
deb0fc73 | 613 | if(d[i] < 0.25)d[i]=0.25; |
614 | } | |
615 | for(i=0; i<=nclust; i++){ c[i]=c[i]*str/str1; } | |
616 | sum1=0.; | |
617 | for(i1=0; i1<=ncell; i1++){ | |
e1287360 | 618 | aint=0.; |
deb0fc73 | 619 | idd=neib[i1][0]; |
620 | for(i2=1; i2<=idd; i2++){ | |
621 | jj=neib[i1][i2]; | |
e1287360 | 622 | dx=xx[i1]-a[jj]; |
623 | dy=yy[i1]-b[jj]; | |
deb0fc73 | 624 | dum=d[jj]*d[jj]+rr*rr; |
625 | aint=aint+exp(-(dx*dx+dy*dy)/dum)*c[i2]*rr*rr/dum; | |
626 | } | |
627 | sum1=sum1+(aint-zz[i1])*(aint-zz[i1])/str; | |
628 | } | |
629 | ||
630 | if(sum1 < sum){ | |
631 | for(i2=0; i2<=nclust; i2++){ | |
e1287360 | 632 | xxc[i2]=a[i2]; |
633 | yyc[i2]=b[i2]; | |
634 | zzc[i2]=c[i2]; | |
635 | rrc[i2]=d[i2]; | |
deb0fc73 | 636 | sum=sum1; |
deb0fc73 | 637 | } |
638 | } | |
639 | } | |
640 | for(j=0; j<=nclust; j++){ | |
e1287360 | 641 | *(&xc+j)=xxc[j]; |
642 | *(&yc+j)=yyc[j]; | |
643 | *(&zc+j)=zzc[j]; | |
deb0fc73 | 644 | *(&rc+j)=rrc[j]; |
645 | } | |
646 | } | |
afef6247 | 647 | // ------------------------------------------------------------------------ // |
a918d77a | 648 | double AliPMDClustering::Distance(double x1, double y1, double x2, double y2) |
deb0fc73 | 649 | { |
650 | return sqrt((x1-x2)*(x1-x2) + (y1-y2)*(y1-y2)); | |
651 | } | |
afef6247 | 652 | // ------------------------------------------------------------------------ // |
a918d77a | 653 | double AliPMDClustering::Ranmar() const |
deb0fc73 | 654 | { |
a918d77a | 655 | // Universal random number generator proposed by Marsaglia and Zaman |
656 | // in report FSU-SCRI-87-50 | |
deb0fc73 | 657 | |
658 | // clock_t start; | |
659 | int ii, jj; | |
660 | static int i=96, j=32, itest=0, i1, i2, i3, i4, i5; | |
661 | static double u[97], c, cd, cm, s, t; | |
662 | static double uni; | |
663 | int count1,count2,idum; | |
664 | /* $$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$ */ | |
665 | if (itest == 0) { | |
666 | //******************************************************* | |
667 | // following three lines if the seed to be provided by computer | |
668 | // start = time(NULL); | |
669 | // ii=start; | |
670 | // jj=start; | |
671 | //******************************************************* | |
672 | //following two lines for fixed seed ( during testing only. Else | |
673 | //use preceeing three lines | |
674 | ii=8263; | |
675 | jj=5726; | |
676 | if(ii > 31328 ) ii = ii - ( ii / 31328 ) * 31328; | |
677 | if(jj > 30081 ) jj = jj - ( jj / 30081 ) * 30081; | |
678 | itest=itest+1; | |
e1287360 | 679 | if((( ii > 0 ) && ( ii <= 31328 )) && (( jj > 0 ) && |
deb0fc73 | 680 | ( jj <= 30081 ))){ |
e1287360 | 681 | i1=ii/177+2; i2=ii-(i1-2)*177+2; i3=jj/169+1; i4=jj-(i3-1)*169; |
deb0fc73 | 682 | i4 = jj - (i3-1)*169; |
683 | count1=0; | |
684 | while ( count1 < 97 ){ | |
685 | s=0.; | |
686 | t=0.5; | |
687 | count2=0; | |
688 | while( count2 < 24 ){ | |
689 | idum=i1*i2/179; | |
690 | idum=( i1*i2 - (i1*i2/179)*179 ) * i3; | |
691 | i5=idum-(idum/179)*179; | |
692 | i1=i2; i2=i3; i3=i5; idum=53*i4+1; i4=idum-(idum/169)*169; | |
693 | if( i4*i5-((i4*i5)/64)*64 >= 32 ) s=s+t; | |
694 | t=0.5*t; | |
695 | count2=count2+1; | |
696 | } | |
697 | u[count1] = s; | |
698 | count1 = count1 +1; | |
699 | } | |
e1287360 | 700 | c = 362436./16777216.; cd = 7654321./16777216.; |
deb0fc73 | 701 | cm = 16777213./16777216.; |
702 | } | |
703 | else{ | |
704 | cout << " wrong initialization " << endl; | |
705 | } | |
706 | } | |
707 | else{ | |
a918d77a | 708 | uni = u[i] - u[j]; |
709 | if( uni < 0.) uni = uni + 1; | |
e1287360 | 710 | u[i] = uni; |
deb0fc73 | 711 | i = i -1; |
a918d77a | 712 | if( i < 0 ) i = 96; |
713 | j = j - 1; | |
714 | if ( j < 0 ) j = 96; | |
715 | c = c - cd; | |
716 | if( c < 0. ) c = c+cm; | |
717 | uni = uni-c ; | |
718 | if( uni < 0. )uni = uni+1.; | |
deb0fc73 | 719 | } |
720 | return uni; | |
e1287360 | 721 | } |
afef6247 | 722 | // ------------------------------------------------------------------------ // |
ed228cbc | 723 | void AliPMDClustering::SetEdepCut(Float_t decut) |
724 | { | |
725 | fCutoff = decut; | |
726 | } | |
afef6247 | 727 | // ------------------------------------------------------------------------ // |
ed228cbc | 728 | void AliPMDClustering::SetDebug(Int_t idebug) |
deb0fc73 | 729 | { |
ed228cbc | 730 | fDebug = idebug; |
deb0fc73 | 731 | } |