[u/mrichter/AliRoot.git] / PWG1 / TRD / AliTRDpidRefMaker.cxx

#include "TPDGCode.h"
#include "TFile.h"
#include "TTree.h"
#include "TEventList.h"
#include "TObjArray.h"
#include "TH2.h"

#include "AliLog.h"
#include "AliESDtrack.h"
#include "AliTrackReference.h"

#include "AliTRDReconstructor.h"
#include "AliTRDtrackV1.h"
#include "AliTRDseedV1.h"
#include "AliTRDpidRefMaker.h"
#include "info/AliTRDv0Info.h"


// Defines and implements basic functionality for building reference data for TRD PID. 
// 
// Here is the list of functionality provided by this class
// 1.
// 2.
// 
// Authors:
//   Alex Bercuci <A.Bercuci@gsi.de>
//   Alex Wilk    <wilka@uni-muenster.de>
//   Markus Fasel <mfasel@gsi.de>
//   Markus Heide <mheide@uni-muenster.de>
// 

ClassImp(AliTRDpidRefMaker)
ClassImp(AliTRDpidRefMaker::AliTRDpidRefData)
ClassImp(AliTRDpidRefMaker::AliTRDpidRefDataArray)

//________________________________________________________________________
AliTRDpidRefMaker::AliTRDpidRefDataArray::AliTRDpidRefDataArray() :
  fNtracklets(0)
  ,fData(NULL)
{
  // Constructor of data array
  fData = new AliTRDpidRefData[AliTRDgeometry::kNlayer];
}

//________________________________________________________________________
AliTRDpidRefMaker::AliTRDpidRefDataArray::~AliTRDpidRefDataArray()
{
  // Destructor
  delete [] fData;
}

//________________________________________________________________________
void AliTRDpidRefMaker::AliTRDpidRefDataArray::PushBack(Int_t ly, Int_t p, Float_t *dedx)
{
// Add PID data to the end of the array 
  fData[fNtracklets].fPLbin= (ly<<4) | (p&0xf);
  memcpy(fData[fNtracklets].fdEdx, dedx, 8*sizeof(Float_t));
  fNtracklets++;
}

//________________________________________________________________________
void AliTRDpidRefMaker::AliTRDpidRefDataArray::Reset()
{
// Reset content

  if(!fNtracklets) return;
  while(fNtracklets--){
    fData[fNtracklets].fPLbin = 0xff;
    memset(fData[fNtracklets].fdEdx, 0, 8*sizeof(Float_t));
  }
  fNtracklets=0;
}

//________________________________________________________________________
AliTRDpidRefMaker::AliTRDpidRefMaker() 
  :AliTRDrecoTask()
  ,fReconstructor(NULL)
  ,fV0s(NULL)
  ,fData(NULL)
  ,fInfo(NULL)
  ,fPIDdataArray(NULL)
  ,fRefPID(kMC)
  ,fRefP(kMC)
  ,fPIDbin(0xff)
  ,fFreq(1.)
  ,fP(-1.)
  ,fPthreshold(0.)
{
  //
  // Default constructor
  //
  SetNameTitle("PIDrefMaker", "PID Reference Maker");
}

//________________________________________________________________________
AliTRDpidRefMaker::AliTRDpidRefMaker(const char *name, const char *title) 
  :AliTRDrecoTask(name, title)
  ,fReconstructor(NULL)
  ,fV0s(NULL)
  ,fData(NULL)
  ,fInfo(NULL)
  ,fPIDdataArray(NULL)
  ,fRefPID(kMC)
  ,fRefP(kMC)
  ,fPIDbin(0xff)
  ,fFreq(1.)
  ,fP(-1.)
  ,fPthreshold(0.5)
{
  //
  // Default constructor
  //

  fReconstructor = new AliTRDReconstructor();
  fReconstructor->SetRecoParam(AliTRDrecoParam::GetLowFluxParam());
  memset(fdEdx, 0, 10*sizeof(Float_t));
  memset(fPID, 0, AliPID::kSPECIES*sizeof(Float_t));

  DefineInput(2, TObjArray::Class()); // v0 list
  DefineInput(3, TObjArray::Class()); // pid info list 
  DefineOutput(2, TTree::Class());
}


//________________________________________________________________________
AliTRDpidRefMaker::~AliTRDpidRefMaker() 
{
  if(fPIDdataArray) delete fPIDdataArray;
  if(fReconstructor) delete fReconstructor;
}

//________________________________________________________________________
Bool_t AliTRDpidRefMaker::CheckQuality(AliTRDseedV1* /*trklt*/)
{
// Place holder for checking tracklet quality for PID.
  return kTRUE;  
}


//________________________________________________________________________
Float_t* AliTRDpidRefMaker::CookdEdx(AliTRDseedV1 *trklt)
{
  trklt->CookdEdx(AliTRDpidUtil::kNNslices);
  memcpy(fdEdx, trklt->GetdEdx(), AliTRDpidUtil::kNNslices*sizeof(Float_t));
  return fdEdx;
}


//________________________________________________________________________
void AliTRDpidRefMaker::UserCreateOutputObjects()
{
  // Create histograms
  // Called once

  OpenFile(1, "RECREATE");
  fContainer = new TObjArray();
  fContainer->SetName(Form("Moni%s", GetName()));

  TH2 *h2 = new TH2I("hPDG","Particle abundance", AliPID::kSPECIES, -0.5, 4.5, AliTRDCalPID::kNMom, -0.5, AliTRDCalPID::kNMom-0.5);
  TAxis *ax = h2->GetXaxis();
  ax->SetNdivisions(505);
  ax->SetTitle("Particle species");
  for(Int_t is=AliPID::kSPECIES; is--;) ax->SetBinLabel(is+1, AliPID::ParticleShortName(is));
  h2->GetYaxis()->SetTitle("P bins");
  h2->GetYaxis()->SetNdivisions(511);

  fContainer->AddAt(h2, 0);

  fData = new TTree(GetName(), Form("Reference data for %s", GetName()));
  fData->Branch("s", &fPIDbin, "s/b");
  fData->Branch("data", &fPIDdataArray);
}

//________________________________________________________________________
void AliTRDpidRefMaker::UserExec(Option_t *) 
{
  // Main loop
  // Called for each event

  fV0s  = dynamic_cast<TObjArray*>(GetInputData(2));
  fInfo = dynamic_cast<TObjArray*>(GetInputData(3));

  AliInfo(Form("Analyse N[%d] tracks", fTracks->GetEntriesFast()));
  AliTRDtrackInfo     *track = NULL;
  AliTRDtrackV1    *trackTRD = NULL;
  AliTrackReference     *ref = NULL;
  const AliTRDtrackInfo::AliESDinfo *infoESD = NULL;
  for(Int_t itrk=0; itrk<fTracks->GetEntriesFast(); itrk++){
    track = (AliTRDtrackInfo*)fTracks->UncheckedAt(itrk);
    if(!track->HasESDtrack()) continue;
    trackTRD = track->GetTrack();
    infoESD  = track->GetESDinfo();
    Double32_t *infoPID = infoESD->GetSliceIter();
    Int_t n = infoESD->GetNSlices() - AliTRDgeometry::kNlayer;
    if(n==0){
      AliWarning(Form("dEdx info missing in ESD track %d", itrk));
      continue;
    }
    Double32_t *p = &infoPID[n];
    AliDebug(4, Form("n[%d] p[GeV/c]{%6.2f %6.2f %6.2f %6.2f %6.2f %6.2f}", n, p[0], p[1], p[2], p[3], p[4], p[5]));

    ULong_t status = track->GetStatus();
    if(!(status&AliESDtrack::kTPCout)) continue;

    // fill the pid information
    SetRefPID(fRefPID, track, fPID);

    // prepare PID data array
    if(!fPIDdataArray){ 
      fPIDdataArray = new AliTRDpidRefDataArray();
    } else fPIDdataArray->Reset();

    // fill PID information
    for(Int_t ily = 0; ily < AliTRDgeometry::kNlayer; ily++){

      // fill P & dE/dx information
      if(HasFriends()){ // from TRD track
        if(!trackTRD) continue;
        AliTRDseedV1 *trackletTRD(NULL);
        trackTRD -> SetReconstructor(fReconstructor);
        if(!(trackletTRD = trackTRD -> GetTracklet(ily))) continue;
        if(!CheckQuality(trackletTRD)) continue;
        if(!CookdEdx(trackletTRD)) continue;

        // fill momentum information
        fP = 0.;
        switch(fRefP){
        case kMC:
          if(!(ref = track->GetTrackRef(trackletTRD))) continue;
          fP = ref->P();
          break;
        case kRec:
          fP = trackletTRD->GetMomentum();
          break;
        default: continue;
        }
      } else { // from ESD track
        // fill momentum information
        switch(fRefP){
        case kMC:
          if(!(ref = track->GetTrackRef(ily))) continue;
          fP = ref->P();
          break;
        case kRec:
          fP = p[ily];
          break;
        default: continue;
        } 
        Double32_t *it = &infoPID[ily*AliTRDCalPID::kNSlicesNN];
        for(Int_t is=AliTRDCalPID::kNSlicesNN; is--; it++) fdEdx[is] = (*it);
      }

      // momentum threshold
      if(fP < fPthreshold) continue;

      // store information
      fPIDdataArray->PushBack(ily, AliTRDpidUtil::GetMomentumBin(fP), fdEdx);
    }

    Fill();
  }

  PostData(1, fContainer);
  PostData(2, fData);
}


//________________________________________________________________________
void AliTRDpidRefMaker::Fill() 
{
// Fill data tree

  if(!fPIDdataArray->fNtracklets) return;
  fPIDbin = TMath::LocMax(AliPID::kSPECIES, fPID); // get particle type
// Fill data tree
  AliInfo(Form("fData[%p]", (void*)fData));
  fData->Fill();

  
  // fill monitor
  for(Int_t ily=fPIDdataArray->fNtracklets; ily--;){
    Int_t pBin = fPIDdataArray->fData[ily].fPLbin & 0xf;
    ((TH2*)fContainer->At(0))->Fill(fPIDbin, pBin);
  }
}

//________________________________________________________________________
void AliTRDpidRefMaker::LinkPIDdata() 
{
// Link data tree to data members
  fData->SetBranchAddress("s", &fPIDbin);
  fData->SetBranchAddress("data", &fPIDdataArray);
}

//________________________________________________________________________
void AliTRDpidRefMaker::SetRefPID(ETRDpidRefMakerSource select, void *source, Float_t *pid) 
{
// Fill the reference PID values "pid" from "source" object
// according to the option "select". Possible options are
// - kV0  - v0 based PID
// - kMC  - MC truth [default]
// - kRec - outside detectors


  memset(fPID, 0, AliPID::kSPECIES*sizeof(Float_t));
  switch(select){ 
  case kV0:
    {
      AliTRDtrackInfo *track = static_cast<AliTRDtrackInfo*>(source);
      if(!track){
        AliError("No trackInfo found");
        return;
      }

      //Get V0 PID decisions from the AliTRDv0Info for all particle species (implemented so far : electrons from conversions, pions from K0s and protons from Lambdas) :
      AliTRDv0Info v0;
      for(Int_t is=AliPID::kSPECIES; is--;) fPID[is] = v0.GetV0PID(is, track);
    }
    break;
  case kMC:
    if(!HasMCdata()){
      AliError("Could not retrive reference PID from MC");
      return;
    }
    {
      AliTRDtrackInfo *track = static_cast<AliTRDtrackInfo*>(source);
      switch(track->GetPDG()){
      case kElectron:
      case kPositron:
        fPID[AliPID::kElectron] = 1.;
        break;
      case kMuonPlus:
      case kMuonMinus:
        fPID[AliPID::kMuon] = 1.;
        break;
      case kPiPlus:
      case kPiMinus:
        fPID[AliPID::kPion] = 1.;
        break;
      case kKPlus:
      case kKMinus:
        fPID[AliPID::kKaon] = 1.;
        break;
      case kProton:
      case kProtonBar:
        fPID[AliPID::kProton] = 1.;
        break;
      }
    }
    break;
  case kRec:
    { 
      AliTRDtrackInfo *track = static_cast<AliTRDtrackInfo*>(source);
      AliTRDtrackV1 *trackTRD = track->GetTrack();
      trackTRD -> SetReconstructor(fReconstructor);
      //fReconstructor -> SetOption("nn");
      trackTRD -> CookPID();
      for(Int_t iPart = 0; iPart < AliPID::kSPECIES; iPart++){
        pid[iPart] = trackTRD -> GetPID(iPart);
        AliDebug(4, Form("PDG is (in V0info) %d %f", iPart, pid[iPart]));
      }
    }
    break;
  default:
    AliWarning("PID reference source not implemented");
    return;
  }
  AliDebug(4, Form("Ref PID [%] : %s[%5.2f] %s[%5.2f] %s[%5.2f] %s[%5.2f] %s[%5.2f]"
    ,AliPID::ParticleShortName(0), 1.e2*fPID[0]
    ,AliPID::ParticleShortName(1), 1.e2*fPID[1]
    ,AliPID::ParticleShortName(2), 1.e2*fPID[2]
    ,AliPID::ParticleShortName(3), 1.e2*fPID[3]
    ,AliPID::ParticleShortName(4), 1.e2*fPID[4]
  ));
}

//________________________________________________________________________
void AliTRDpidRefMaker::SetAbundance(Float_t train) 
{
// Split data sample between trainning and testing

  if(train<0. || train >1.){
    AliWarning("The input data should be in the interval [0, 1]");
    return;
  }

  fFreq = train; 
}
Commit	Line	Data
1ee39b3a	1	#include "TPDGCode.h"
	2	#include "TFile.h"
	3	#include "TTree.h"
	4	#include "TEventList.h"
	5	#include "TObjArray.h"
	6	#include "TH2.h"
	7
	8	#include "AliLog.h"
	9	#include "AliESDtrack.h"
	10	#include "AliTrackReference.h"
	11
	12	#include "AliTRDReconstructor.h"
	13	#include "AliTRDtrackV1.h"
	14	#include "AliTRDseedV1.h"
	15	#include "AliTRDpidRefMaker.h"
	16	#include "info/AliTRDv0Info.h"
	17
	18
	19	// Defines and implements basic functionality for building reference data for TRD PID.
	20	//
	21	// Here is the list of functionality provided by this class
	22	// 1.
	23	// 2.
	24	//
	25	// Authors:
	26	// Alex Bercuci <A.Bercuci@gsi.de>
	27	// Alex Wilk <wilka@uni-muenster.de>
	28	// Markus Fasel <mfasel@gsi.de>
	29	// Markus Heide <mheide@uni-muenster.de>
	30	//
	31
	32	ClassImp(AliTRDpidRefMaker)
	33	ClassImp(AliTRDpidRefMaker::AliTRDpidRefData)
	34	ClassImp(AliTRDpidRefMaker::AliTRDpidRefDataArray)
	35
	36	//________________________________________________________________________
	37	AliTRDpidRefMaker::AliTRDpidRefDataArray::AliTRDpidRefDataArray() :
	38	fNtracklets(0)
b91fdd71	39	,fData(NULL)
1ee39b3a	40	{
	41	// Constructor of data array
	42	fData = new AliTRDpidRefData[AliTRDgeometry::kNlayer];
	43	}
	44
	45	//________________________________________________________________________
	46	AliTRDpidRefMaker::AliTRDpidRefDataArray::~AliTRDpidRefDataArray()
	47	{
	48	// Destructor
	49	delete [] fData;
	50	}
	51
	52	//________________________________________________________________________
	53	void AliTRDpidRefMaker::AliTRDpidRefDataArray::PushBack(Int_t ly, Int_t p, Float_t *dedx)
	54	{
	55	// Add PID data to the end of the array
	56	fData[fNtracklets].fPLbin= (ly<<4) \| (p&0xf);
	57	memcpy(fData[fNtracklets].fdEdx, dedx, 8*sizeof(Float_t));
	58	fNtracklets++;
	59	}
	60
	61	//________________________________________________________________________
	62	void AliTRDpidRefMaker::AliTRDpidRefDataArray::Reset()
	63	{
	64	// Reset content
	65
	66	if(!fNtracklets) return;
	67	while(fNtracklets--){
	68	fData[fNtracklets].fPLbin = 0xff;
	69	memset(fData[fNtracklets].fdEdx, 0, 8*sizeof(Float_t));
	70	}
	71	fNtracklets=0;
	72	}
	73
705f8b0a	74	//________________________________________________________________________
	75	AliTRDpidRefMaker::AliTRDpidRefMaker()
	76	:AliTRDrecoTask()
	77	,fReconstructor(NULL)
	78	,fV0s(NULL)
	79	,fData(NULL)
	80	,fInfo(NULL)
	81	,fPIDdataArray(NULL)
	82	,fRefPID(kMC)
	83	,fRefP(kMC)
	84	,fPIDbin(0xff)
	85	,fFreq(1.)
	86	,fP(-1.)
	87	,fPthreshold(0.)
	88	{
	89	//
	90	// Default constructor
	91	//
	92	SetNameTitle("PIDrefMaker", "PID Reference Maker");
	93	}
	94
1ee39b3a	95	//________________________________________________________________________
	96	AliTRDpidRefMaker::AliTRDpidRefMaker(const char name, const char title)
	97	:AliTRDrecoTask(name, title)
b91fdd71	98	,fReconstructor(NULL)
	99	,fV0s(NULL)
	100	,fData(NULL)
	101	,fInfo(NULL)
	102	,fPIDdataArray(NULL)
1ee39b3a	103	,fRefPID(kMC)
	104	,fRefP(kMC)
	105	,fPIDbin(0xff)
	106	,fFreq(1.)
	107	,fP(-1.)
	108	,fPthreshold(0.5)
	109	{
	110	//
	111	// Default constructor
	112	//
	113
	114	fReconstructor = new AliTRDReconstructor();
	115	fReconstructor->SetRecoParam(AliTRDrecoParam::GetLowFluxParam());
	116	memset(fdEdx, 0, 10*sizeof(Float_t));
	117	memset(fPID, 0, AliPID::kSPECIES*sizeof(Float_t));
	118
705f8b0a	119	DefineInput(2, TObjArray::Class()); // v0 list
	120	DefineInput(3, TObjArray::Class()); // pid info list
	121	DefineOutput(2, TTree::Class());
1ee39b3a	122	}
	123
	124
	125	//________________________________________________________________________
	126	AliTRDpidRefMaker::~AliTRDpidRefMaker()
	127	{
	128	if(fPIDdataArray) delete fPIDdataArray;
	129	if(fReconstructor) delete fReconstructor;
	130	}
	131
	132	//________________________________________________________________________
	133	Bool_t AliTRDpidRefMaker::CheckQuality(AliTRDseedV1* /trklt/)
	134	{
	135	// Place holder for checking tracklet quality for PID.
	136	return kTRUE;
	137	}
	138
	139
	140	//________________________________________________________________________
	141	Float_t* AliTRDpidRefMaker::CookdEdx(AliTRDseedV1 *trklt)
	142	{
	143	trklt->CookdEdx(AliTRDpidUtil::kNNslices);
	144	memcpy(fdEdx, trklt->GetdEdx(), AliTRDpidUtil::kNNslices*sizeof(Float_t));
	145	return fdEdx;
	146	}
	147
	148
1ee39b3a	149	//________________________________________________________________________
f8f46e4d	150	void AliTRDpidRefMaker::UserCreateOutputObjects()
1ee39b3a	151	{
	152	// Create histograms
	153	// Called once
	154
f8f46e4d	155	OpenFile(1, "RECREATE");
1ee39b3a	156	fContainer = new TObjArray();
	157	fContainer->SetName(Form("Moni%s", GetName()));
	158
	159	TH2 *h2 = new TH2I("hPDG","Particle abundance", AliPID::kSPECIES, -0.5, 4.5, AliTRDCalPID::kNMom, -0.5, AliTRDCalPID::kNMom-0.5);
	160	TAxis *ax = h2->GetXaxis();
	161	ax->SetNdivisions(505);
	162	ax->SetTitle("Particle species");
	163	for(Int_t is=AliPID::kSPECIES; is--;) ax->SetBinLabel(is+1, AliPID::ParticleShortName(is));
	164	h2->GetYaxis()->SetTitle("P bins");
	165	h2->GetYaxis()->SetNdivisions(511);
	166
	167	fContainer->AddAt(h2, 0);
	168
	169	fData = new TTree(GetName(), Form("Reference data for %s", GetName()));
	170	fData->Branch("s", &fPIDbin, "s/b");
	171	fData->Branch("data", &fPIDdataArray);
	172	}
	173
	174	//________________________________________________________________________
f8f46e4d	175	void AliTRDpidRefMaker::UserExec(Option_t *)
1ee39b3a	176	{
	177	// Main loop
	178	// Called for each event
	179
5935a6da	180	fV0s = dynamic_cast<TObjArray*>(GetInputData(2));
5935a6da	181	fInfo = dynamic_cast<TObjArray*>(GetInputData(3));
705f8b0a	182
5935a6da	183	AliInfo(Form("Analyse N[%d] tracks", fTracks->GetEntriesFast()));
b91fdd71	184	AliTRDtrackInfo *track = NULL;
	185	AliTRDtrackV1 *trackTRD = NULL;
	186	AliTrackReference *ref = NULL;
	187	const AliTRDtrackInfo::AliESDinfo *infoESD = NULL;
1ee39b3a	188	for(Int_t itrk=0; itrk<fTracks->GetEntriesFast(); itrk++){
	189	track = (AliTRDtrackInfo*)fTracks->UncheckedAt(itrk);
	190	if(!track->HasESDtrack()) continue;
	191	trackTRD = track->GetTrack();
	192	infoESD = track->GetESDinfo();
	193	Double32_t *infoPID = infoESD->GetSliceIter();
	194	Int_t n = infoESD->GetNSlices() - AliTRDgeometry::kNlayer;
46760dda	195	if(n==0){
	196	AliWarning(Form("dEdx info missing in ESD track %d", itrk));
	197	continue;
	198	}
1ee39b3a	199	Double32_t *p = &infoPID[n];
4226db3e	200	AliDebug(4, Form("n[%d] p[GeV/c]{%6.2f %6.2f %6.2f %6.2f %6.2f %6.2f}", n, p[0], p[1], p[2], p[3], p[4], p[5]));
1ee39b3a	201
	202	ULong_t status = track->GetStatus();
	203	if(!(status&AliESDtrack::kTPCout)) continue;
	204
	205	// fill the pid information
	206	SetRefPID(fRefPID, track, fPID);
	207
	208	// prepare PID data array
	209	if(!fPIDdataArray){
	210	fPIDdataArray = new AliTRDpidRefDataArray();
	211	} else fPIDdataArray->Reset();
	212
	213	// fill PID information
	214	for(Int_t ily = 0; ily < AliTRDgeometry::kNlayer; ily++){
	215
	216	// fill P & dE/dx information
	217	if(HasFriends()){ // from TRD track
	218	if(!trackTRD) continue;
b91fdd71	219	AliTRDseedV1 *trackletTRD(NULL);
1ee39b3a	220	trackTRD -> SetReconstructor(fReconstructor);
	221	if(!(trackletTRD = trackTRD -> GetTracklet(ily))) continue;
	222	if(!CheckQuality(trackletTRD)) continue;
	223	if(!CookdEdx(trackletTRD)) continue;
	224
	225	// fill momentum information
	226	fP = 0.;
	227	switch(fRefP){
	228	case kMC:
	229	if(!(ref = track->GetTrackRef(trackletTRD))) continue;
	230	fP = ref->P();
	231	break;
	232	case kRec:
	233	fP = trackletTRD->GetMomentum();
	234	break;
	235	default: continue;
	236	}
	237	} else { // from ESD track
	238	// fill momentum information
	239	switch(fRefP){
	240	case kMC:
	241	if(!(ref = track->GetTrackRef(ily))) continue;
	242	fP = ref->P();
	243	break;
	244	case kRec:
	245	fP = p[ily];
	246	break;
	247	default: continue;
	248	}
	249	Double32_t it = &infoPID[ilyAliTRDCalPID::kNSlicesNN];
	250	for(Int_t is=AliTRDCalPID::kNSlicesNN; is--; it++) fdEdx[is] = (*it);
	251	}
	252
	253	// momentum threshold
	254	if(fP < fPthreshold) continue;
	255
	256	// store information
	257	fPIDdataArray->PushBack(ily, AliTRDpidUtil::GetMomentumBin(fP), fdEdx);
	258	}
	259
	260	Fill();
	261	}
	262
f8f46e4d	263	PostData(1, fContainer);
f8f46e4d	264	PostData(2, fData);
1ee39b3a	265	}
	266
	267
	268	//________________________________________________________________________
	269	void AliTRDpidRefMaker::Fill()
	270	{
	271	// Fill data tree
	272
	273	if(!fPIDdataArray->fNtracklets) return;
	274	fPIDbin = TMath::LocMax(AliPID::kSPECIES, fPID); // get particle type
	275	// Fill data tree
705f8b0a	276	AliInfo(Form("fData[%p]", (void*)fData));
1ee39b3a	277	fData->Fill();
	278
	279
	280	// fill monitor
	281	for(Int_t ily=fPIDdataArray->fNtracklets; ily--;){
	282	Int_t pBin = fPIDdataArray->fData[ily].fPLbin & 0xf;
	283	((TH2*)fContainer->At(0))->Fill(fPIDbin, pBin);
	284	}
	285	}
	286
	287	//________________________________________________________________________
	288	void AliTRDpidRefMaker::LinkPIDdata()
	289	{
	290	// Link data tree to data members
	291	fData->SetBranchAddress("s", &fPIDbin);
	292	fData->SetBranchAddress("data", &fPIDdataArray);
	293	}
	294
	295	//________________________________________________________________________
	296	void AliTRDpidRefMaker::SetRefPID(ETRDpidRefMakerSource select, void source, Float_t pid)
	297	{
	298	// Fill the reference PID values "pid" from "source" object
	299	// according to the option "select". Possible options are
	300	// - kV0 - v0 based PID
	301	// - kMC - MC truth [default]
	302	// - kRec - outside detectors
	303
	304
	305	memset(fPID, 0, AliPID::kSPECIES*sizeof(Float_t));
	306	switch(select){
	307	case kV0:
	308	{
	309	AliTRDtrackInfo track = static_cast<AliTRDtrackInfo>(source);
	310	if(!track){
	311	AliError("No trackInfo found");
	312	return;
	313	}
	314
	315	//Get V0 PID decisions from the AliTRDv0Info for all particle species (implemented so far : electrons from conversions, pions from K0s and protons from Lambdas) :
	316	AliTRDv0Info v0;
	317	for(Int_t is=AliPID::kSPECIES; is--;) fPID[is] = v0.GetV0PID(is, track);
	318	}
	319	break;
	320	case kMC:
	321	if(!HasMCdata()){
	322	AliError("Could not retrive reference PID from MC");
	323	return;
	324	}
	325	{
	326	AliTRDtrackInfo track = static_cast<AliTRDtrackInfo>(source);
	327	switch(track->GetPDG()){
	328	case kElectron:
	329	case kPositron:
	330	fPID[AliPID::kElectron] = 1.;
	331	break;
	332	case kMuonPlus:
	333	case kMuonMinus:
	334	fPID[AliPID::kMuon] = 1.;
	335	break;
	336	case kPiPlus:
	337	case kPiMinus:
	338	fPID[AliPID::kPion] = 1.;
	339	break;
	340	case kKPlus:
341	case kKMinus:
342	fPID[AliPID::kKaon] = 1.;
343	break;
344	case kProton:
345	case kProtonBar:
346	fPID[AliPID::kProton] = 1.;
347	break;
348	}
349	}
350	break;
351	case kRec:
352	{
353	AliTRDtrackInfo track = static_cast<AliTRDtrackInfo>(source);
354	AliTRDtrackV1 *trackTRD = track->GetTrack();
355	trackTRD -> SetReconstructor(fReconstructor);
356	//fReconstructor -> SetOption("nn");
357	trackTRD -> CookPID();
358	for(Int_t iPart = 0; iPart < AliPID::kSPECIES; iPart++){
359	pid[iPart] = trackTRD -> GetPID(iPart);
360	AliDebug(4, Form("PDG is (in V0info) %d %f", iPart, pid[iPart]));
361	}
362	}
363	break;
364	default:
365	AliWarning("PID reference source not implemented");
366	return;
367	}
368	AliDebug(4, Form("Ref PID [%] : %s[%5.2f] %s[%5.2f] %s[%5.2f] %s[%5.2f] %s[%5.2f]"
369	,AliPID::ParticleShortName(0), 1.e2*fPID[0]
370	,AliPID::ParticleShortName(1), 1.e2*fPID[1]
371	,AliPID::ParticleShortName(2), 1.e2*fPID[2]
372	,AliPID::ParticleShortName(3), 1.e2*fPID[3]
373	,AliPID::ParticleShortName(4), 1.e2*fPID[4]
374	));
375	}
376
377	//________________________________________________________________________
378	void AliTRDpidRefMaker::SetAbundance(Float_t train)
379	{
380	// Split data sample between trainning and testing
381
382	if(train<0. \|\| train >1.){
383	AliWarning("The input data should be in the interval [0, 1]");
384	return;
385	}
386
387	fFreq = train;
388	}
389