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1c53abe2 | 1 | /************************************************************************** |
2 | * Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. * | |
3 | * * | |
4 | * Author: The ALICE Off-line Project. * | |
5 | * Contributors are mentioned in the code where appropriate. * | |
6 | * * | |
7 | * Permission to use, copy, modify and distribute this software and its * | |
8 | * documentation strictly for non-commercial purposes is hereby granted * | |
9 | * without fee, provided that the above copyright notice appears in all * | |
10 | * copies and that both the copyright notice and this permission notice * | |
11 | * appear in the supporting documentation. The authors make no claims * | |
12 | * about the suitability of this software for any purpose. It is * | |
13 | * provided "as is" without express or implied warranty. * | |
14 | **************************************************************************/ | |
15 | ||
88cb7938 | 16 | /* $Id$ */ |
1c53abe2 | 17 | |
18 | //------------------------------------------------------- | |
19 | // Implementation of the TPC clusterer | |
20 | // | |
ebe95b38 | 21 | // 1. The Input data for reconstruction - Options |
22 | // 1.a Simulated data - TTree - invoked Digits2Clusters() | |
23 | // 1.b Raw data - Digits2Clusters(AliRawReader* rawReader); | |
53a11d77 | 24 | // 1.c HLT clusters - Digits2Clusters and Digits2Clusters(AliRawReader* rawReader) |
25 | // invoke ReadHLTClusters() | |
ebe95b38 | 26 | // |
9abc660b | 27 | // fUseHLTClusters - switches between different inputs |
28 | // 1 -> only TPC raw/sim data | |
29 | // 2 -> if present TPC raw/sim data, otherwise HLT clusters | |
30 | // 3 -> only HLT clusters | |
31 | // 4 -> if present HLT clusters, otherwise TPC raw/sim data | |
32 | // | |
ebe95b38 | 33 | // 2. The Output data |
34 | // 2.a TTree with clusters - if SetOutput(TTree * tree) invoked | |
35 | // 2.b TObjArray - Faster option for HLT | |
98ee6d31 | 36 | // 2.c TClonesArray - Faster option for HLT (smaller memory consumption), activate with fBClonesArray flag |
ebe95b38 | 37 | // |
38 | // 3. Reconstruction setup | |
39 | // see AliTPCRecoParam for list of parameters | |
40 | // The reconstruction parameterization taken from the | |
41 | // AliTPCReconstructor::GetRecoParam() | |
42 | // Possible to setup it in reconstruction macro AliTPCReconstructor::SetRecoParam(...) | |
43 | // | |
44 | // | |
45 | // | |
1c53abe2 | 46 | // Origin: Marian Ivanov |
47 | //------------------------------------------------------- | |
48 | ||
a1e17193 | 49 | #include "Riostream.h" |
50 | #include <TF1.h> | |
1c53abe2 | 51 | #include <TFile.h> |
a1e17193 | 52 | #include <TGraph.h> |
53 | #include <TH1F.h> | |
54 | #include <TObjArray.h> | |
98ee6d31 | 55 | #include <TClonesArray.h> |
a1e17193 | 56 | #include <TRandom.h> |
57 | #include <TTree.h> | |
58 | #include <TTreeStream.h> | |
53a11d77 | 59 | #include "TSystem.h" |
60 | #include "TClass.h" | |
65c045f0 | 61 | |
1c53abe2 | 62 | #include "AliDigits.h" |
a1e17193 | 63 | #include "AliLoader.h" |
64 | #include "AliLog.h" | |
65 | #include "AliMathBase.h" | |
ef4ad662 | 66 | #include "AliRawEventHeaderBase.h" |
a1e17193 | 67 | #include "AliRawReader.h" |
f8aae377 | 68 | #include "AliRunLoader.h" |
a1e17193 | 69 | #include "AliSimDigits.h" |
13116aec | 70 | #include "AliTPCCalPad.h" |
71 | #include "AliTPCCalROC.h" | |
a1e17193 | 72 | #include "AliTPCClustersArray.h" |
73 | #include "AliTPCClustersRow.h" | |
74 | #include "AliTPCParam.h" | |
75 | #include "AliTPCRawStream.h" | |
7c9528d8 | 76 | #include "AliTPCRawStreamV3.h" |
a1e17193 | 77 | #include "AliTPCRecoParam.h" |
78 | #include "AliTPCReconstructor.h" | |
79 | #include "AliTPCcalibDB.h" | |
80 | #include "AliTPCclusterInfo.h" | |
81 | #include "AliTPCclusterMI.h" | |
022ee144 | 82 | #include "AliTPCTransform.h" |
a1e17193 | 83 | #include "AliTPCclustererMI.h" |
13116aec | 84 | |
1c53abe2 | 85 | ClassImp(AliTPCclustererMI) |
86 | ||
87 | ||
88 | ||
2f32844a | 89 | AliTPCclustererMI::AliTPCclustererMI(const AliTPCParam* par, const AliTPCRecoParam * recoParam): |
90 | fBins(0), | |
5b33a7f5 | 91 | fSigBins(0), |
92 | fNSigBins(0), | |
2f32844a | 93 | fLoop(0), |
94 | fMaxBin(0), | |
e7034a8b | 95 | fMaxTime(1006), // 1000>940 so use 1000, add 3 virtual time bins before and 3 after |
2f32844a | 96 | fMaxPad(0), |
97 | fSector(-1), | |
98 | fRow(-1), | |
99 | fSign(0), | |
100 | fRx(0), | |
101 | fPadWidth(0), | |
102 | fPadLength(0), | |
103 | fZWidth(0), | |
104 | fPedSubtraction(kFALSE), | |
ef4ad662 | 105 | fEventHeader(0), |
106 | fTimeStamp(0), | |
107 | fEventType(0), | |
2f32844a | 108 | fInput(0), |
109 | fOutput(0), | |
ebe95b38 | 110 | fOutputArray(0), |
98ee6d31 | 111 | fOutputClonesArray(0), |
2f32844a | 112 | fRowCl(0), |
113 | fRowDig(0), | |
114 | fParam(0), | |
115 | fNcluster(0), | |
98ee6d31 | 116 | fNclusters(0), |
2f32844a | 117 | fDebugStreamer(0), |
03fe1804 | 118 | fRecoParam(0), |
98ee6d31 | 119 | fBDumpSignal(kFALSE), |
e7034a8b | 120 | fBClonesArray(kFALSE), |
9abc660b | 121 | fUseHLTClusters(1), |
e7034a8b | 122 | fAllBins(NULL), |
123 | fAllSigBins(NULL), | |
124 | fAllNSigBins(NULL) | |
1c53abe2 | 125 | { |
97f127bb | 126 | // |
127 | // COSNTRUCTOR | |
128 | // param - tpc parameters for given file | |
129 | // recoparam - reconstruction parameters | |
130 | // | |
1c53abe2 | 131 | fInput =0; |
f8aae377 | 132 | fParam = par; |
194b0609 | 133 | if (recoParam) { |
134 | fRecoParam = recoParam; | |
135 | }else{ | |
136 | //set default parameters if not specified | |
137 | fRecoParam = AliTPCReconstructor::GetRecoParam(); | |
138 | if (!fRecoParam) fRecoParam = AliTPCRecoParam::GetLowFluxParam(); | |
139 | } | |
b2426624 | 140 | |
141 | if(AliTPCReconstructor::StreamLevel()>0) { | |
142 | fDebugStreamer = new TTreeSRedirector("TPCsignal.root"); | |
143 | } | |
144 | ||
eea36fac | 145 | // Int_t nPoints = fRecoParam->GetLastBin()-fRecoParam->GetFirstBin(); |
e7de6656 | 146 | fRowCl= new AliTPCClustersRow("AliTPCclusterMI"); |
d101caf3 | 147 | |
e7034a8b | 148 | // Non-persistent arrays |
149 | // | |
150 | //alocate memory for sector - maximal case | |
151 | // | |
152 | AliTPCROC * roc = AliTPCROC::Instance(); | |
153 | Int_t nRowsMax = roc->GetNRows(roc->GetNSector()-1); | |
154 | Int_t nPadsMax = roc->GetNPads(roc->GetNSector()-1,nRowsMax-1); | |
155 | ||
156 | fAllBins = new Float_t*[nRowsMax]; | |
157 | fAllSigBins = new Int_t*[nRowsMax]; | |
158 | fAllNSigBins = new Int_t[nRowsMax]; | |
159 | for (Int_t iRow = 0; iRow < nRowsMax; iRow++) { | |
160 | // | |
161 | Int_t maxBin = fMaxTime*(nPadsMax+6); // add 3 virtual pads before and 3 after | |
162 | fAllBins[iRow] = new Float_t[maxBin]; | |
163 | memset(fAllBins[iRow],0,sizeof(Float_t)*maxBin); | |
164 | fAllSigBins[iRow] = new Int_t[maxBin]; | |
165 | fAllNSigBins[iRow]=0; | |
166 | } | |
65c045f0 | 167 | } |
e046d791 | 168 | //______________________________________________________________ |
169 | AliTPCclustererMI::AliTPCclustererMI(const AliTPCclustererMI ¶m) | |
170 | :TObject(param), | |
171 | fBins(0), | |
5b33a7f5 | 172 | fSigBins(0), |
173 | fNSigBins(0), | |
e046d791 | 174 | fLoop(0), |
175 | fMaxBin(0), | |
176 | fMaxTime(0), | |
177 | fMaxPad(0), | |
178 | fSector(-1), | |
179 | fRow(-1), | |
180 | fSign(0), | |
181 | fRx(0), | |
182 | fPadWidth(0), | |
183 | fPadLength(0), | |
184 | fZWidth(0), | |
185 | fPedSubtraction(kFALSE), | |
e046d791 | 186 | fEventHeader(0), |
187 | fTimeStamp(0), | |
188 | fEventType(0), | |
189 | fInput(0), | |
190 | fOutput(0), | |
ebe95b38 | 191 | fOutputArray(0), |
98ee6d31 | 192 | fOutputClonesArray(0), |
e046d791 | 193 | fRowCl(0), |
194 | fRowDig(0), | |
195 | fParam(0), | |
196 | fNcluster(0), | |
98ee6d31 | 197 | fNclusters(0), |
e046d791 | 198 | fDebugStreamer(0), |
5b33a7f5 | 199 | fRecoParam(0), |
98ee6d31 | 200 | fBDumpSignal(kFALSE), |
e7034a8b | 201 | fBClonesArray(kFALSE), |
9abc660b | 202 | fUseHLTClusters(1), |
e7034a8b | 203 | fAllBins(NULL), |
204 | fAllSigBins(NULL), | |
205 | fAllNSigBins(NULL) | |
e046d791 | 206 | { |
207 | // | |
208 | // dummy | |
209 | // | |
210 | fMaxBin = param.fMaxBin; | |
211 | } | |
212 | //______________________________________________________________ | |
213 | AliTPCclustererMI & AliTPCclustererMI::operator =(const AliTPCclustererMI & param) | |
214 | { | |
215 | // | |
216 | // assignment operator - dummy | |
217 | // | |
218 | fMaxBin=param.fMaxBin; | |
219 | return (*this); | |
220 | } | |
221 | //______________________________________________________________ | |
65c045f0 | 222 | AliTPCclustererMI::~AliTPCclustererMI(){ |
ebe95b38 | 223 | // |
224 | // | |
225 | // | |
65c045f0 | 226 | if (fDebugStreamer) delete fDebugStreamer; |
ebe95b38 | 227 | if (fOutputArray){ |
af86c1fd | 228 | //fOutputArray->Delete(); |
ebe95b38 | 229 | delete fOutputArray; |
230 | } | |
98ee6d31 | 231 | if (fOutputClonesArray){ |
232 | fOutputClonesArray->Delete(); | |
233 | delete fOutputClonesArray; | |
234 | } | |
e7034a8b | 235 | |
e7de6656 | 236 | if (fRowCl) { |
237 | fRowCl->GetArray()->Delete(); | |
238 | delete fRowCl; | |
239 | } | |
240 | ||
e7034a8b | 241 | AliTPCROC * roc = AliTPCROC::Instance(); |
242 | Int_t nRowsMax = roc->GetNRows(roc->GetNSector()-1); | |
243 | for (Int_t iRow = 0; iRow < nRowsMax; iRow++) { | |
244 | delete [] fAllBins[iRow]; | |
245 | delete [] fAllSigBins[iRow]; | |
246 | } | |
247 | delete [] fAllBins; | |
248 | delete [] fAllSigBins; | |
249 | delete [] fAllNSigBins; | |
1c53abe2 | 250 | } |
22c352f8 | 251 | |
1c53abe2 | 252 | void AliTPCclustererMI::SetInput(TTree * tree) |
253 | { | |
254 | // | |
255 | // set input tree with digits | |
256 | // | |
257 | fInput = tree; | |
258 | if (!fInput->GetBranch("Segment")){ | |
259 | cerr<<"AliTPC::Digits2Clusters(): no porper input tree !\n"; | |
260 | fInput=0; | |
261 | return; | |
262 | } | |
263 | } | |
264 | ||
265 | void AliTPCclustererMI::SetOutput(TTree * tree) | |
266 | { | |
267 | // | |
ebe95b38 | 268 | // Set the output tree |
269 | // If not set the ObjArray used - Option for HLT | |
1c53abe2 | 270 | // |
ebe95b38 | 271 | if (!tree) return; |
272 | fOutput= tree; | |
48b634ff | 273 | AliTPCClustersRow clrow("AliTPCclusterMI"); |
274 | AliTPCClustersRow *pclrow=&clrow; | |
1c53abe2 | 275 | fOutput->Branch("Segment","AliTPCClustersRow",&pclrow,32000,200); |
276 | } | |
277 | ||
278 | ||
ebe95b38 | 279 | void AliTPCclustererMI::FillRow(){ |
280 | // | |
281 | // fill the output container - | |
282 | // 2 Options possible | |
283 | // Tree | |
284 | // TObjArray | |
285 | // | |
286 | if (fOutput) fOutput->Fill(); | |
98ee6d31 | 287 | if (!fOutput && !fBClonesArray){ |
ebe95b38 | 288 | // |
af86c1fd | 289 | if (!fOutputArray) fOutputArray = new TObjArray(fParam->GetNRowsTotal()); |
db3576a7 | 290 | if (fRowCl && fRowCl->GetArray()->GetEntriesFast()>0) fOutputArray->AddAt(fRowCl->Clone(), fRowCl->GetID()); |
ebe95b38 | 291 | } |
292 | } | |
293 | ||
1c53abe2 | 294 | Float_t AliTPCclustererMI::GetSigmaY2(Int_t iz){ |
295 | // sigma y2 = in digits - we don't know the angle | |
753797ce | 296 | Float_t z = iz*fParam->GetZWidth()+fParam->GetNTBinsL1()*fParam->GetZWidth(); |
1c53abe2 | 297 | Float_t sd2 = (z*fParam->GetDiffL()*fParam->GetDiffL())/ |
298 | (fPadWidth*fPadWidth); | |
299 | Float_t sres = 0.25; | |
300 | Float_t res = sd2+sres; | |
301 | return res; | |
302 | } | |
303 | ||
304 | ||
305 | Float_t AliTPCclustererMI::GetSigmaZ2(Int_t iz){ | |
306 | //sigma z2 = in digits - angle estimated supposing vertex constraint | |
753797ce | 307 | Float_t z = iz*fZWidth+fParam->GetNTBinsL1()*fParam->GetZWidth(); |
1c53abe2 | 308 | Float_t sd2 = (z*fParam->GetDiffL()*fParam->GetDiffL())/(fZWidth*fZWidth); |
a1ec4d07 | 309 | Float_t angular = fPadLength*(fParam->GetZLength(fSector)-z)/(fRx*fZWidth); |
1c53abe2 | 310 | angular*=angular; |
311 | angular/=12.; | |
312 | Float_t sres = fParam->GetZSigma()/fZWidth; | |
313 | sres *=sres; | |
314 | Float_t res = angular +sd2+sres; | |
315 | return res; | |
316 | } | |
317 | ||
13116aec | 318 | void AliTPCclustererMI::MakeCluster(Int_t k,Int_t max,Float_t *bins, UInt_t /*m*/, |
1c53abe2 | 319 | AliTPCclusterMI &c) |
320 | { | |
97f127bb | 321 | // |
322 | // k - Make cluster at position k | |
323 | // bins - 2 D array of signals mapped to 1 dimensional array - | |
324 | // max - the number of time bins er one dimension | |
325 | // c - refernce to cluster to be filled | |
326 | // | |
1c53abe2 | 327 | Int_t i0=k/max; //central pad |
328 | Int_t j0=k%max; //central time bin | |
329 | ||
330 | // set pointers to data | |
331 | //Int_t dummy[5] ={0,0,0,0,0}; | |
13116aec | 332 | Float_t * matrix[5]; //5x5 matrix with digits - indexing i = 0 ..4 j = -2..2 |
1c53abe2 | 333 | for (Int_t di=-2;di<=2;di++){ |
334 | matrix[di+2] = &bins[k+di*max]; | |
1c53abe2 | 335 | } |
336 | //build matrix with virtual charge | |
337 | Float_t sigmay2= GetSigmaY2(j0); | |
338 | Float_t sigmaz2= GetSigmaZ2(j0); | |
339 | ||
340 | Float_t vmatrix[5][5]; | |
341 | vmatrix[2][2] = matrix[2][0]; | |
342 | c.SetType(0); | |
6c024a0e | 343 | c.SetMax((UShort_t)(vmatrix[2][2])); // write maximal amplitude |
1c53abe2 | 344 | for (Int_t di =-1;di <=1;di++) |
345 | for (Int_t dj =-1;dj <=1;dj++){ | |
346 | Float_t amp = matrix[di+2][dj]; | |
347 | if ( (amp<2) && (fLoop<2)){ | |
348 | // if under threshold - calculate virtual charge | |
349 | Float_t ratio = TMath::Exp(-1.2*TMath::Abs(di)/sigmay2)*TMath::Exp(-1.2*TMath::Abs(dj)/sigmaz2); | |
350 | amp = ((matrix[2][0]-2)*(matrix[2][0]-2)/(matrix[-di+2][-dj]+2))*ratio; | |
351 | if (amp>2) amp = 2; | |
352 | vmatrix[2+di][2+dj]=amp; | |
353 | vmatrix[2+2*di][2+2*dj]=0; | |
354 | if ( (di*dj)!=0){ | |
355 | //DIAGONAL ELEMENTS | |
356 | vmatrix[2+2*di][2+dj] =0; | |
357 | vmatrix[2+di][2+2*dj] =0; | |
358 | } | |
359 | continue; | |
360 | } | |
361 | if (amp<4){ | |
362 | //if small amplitude - below 2 x threshold - don't consider other one | |
363 | vmatrix[2+di][2+dj]=amp; | |
364 | vmatrix[2+2*di][2+2*dj]=0; // don't take to the account next bin | |
365 | if ( (di*dj)!=0){ | |
366 | //DIAGONAL ELEMENTS | |
367 | vmatrix[2+2*di][2+dj] =0; | |
368 | vmatrix[2+di][2+2*dj] =0; | |
369 | } | |
370 | continue; | |
371 | } | |
372 | //if bigger then take everything | |
373 | vmatrix[2+di][2+dj]=amp; | |
374 | vmatrix[2+2*di][2+2*dj]= matrix[2*di+2][2*dj] ; | |
375 | if ( (di*dj)!=0){ | |
376 | //DIAGONAL ELEMENTS | |
377 | vmatrix[2+2*di][2+dj] = matrix[2*di+2][dj]; | |
378 | vmatrix[2+di][2+2*dj] = matrix[2+di][dj*2]; | |
379 | } | |
380 | } | |
381 | ||
382 | ||
383 | ||
384 | Float_t sumw=0; | |
385 | Float_t sumiw=0; | |
386 | Float_t sumi2w=0; | |
387 | Float_t sumjw=0; | |
388 | Float_t sumj2w=0; | |
389 | // | |
390 | for (Int_t i=-2;i<=2;i++) | |
391 | for (Int_t j=-2;j<=2;j++){ | |
392 | Float_t amp = vmatrix[i+2][j+2]; | |
393 | ||
394 | sumw += amp; | |
395 | sumiw += i*amp; | |
396 | sumi2w += i*i*amp; | |
397 | sumjw += j*amp; | |
398 | sumj2w += j*j*amp; | |
399 | } | |
400 | // | |
401 | Float_t meani = sumiw/sumw; | |
402 | Float_t mi2 = sumi2w/sumw-meani*meani; | |
403 | Float_t meanj = sumjw/sumw; | |
404 | Float_t mj2 = sumj2w/sumw-meanj*meanj; | |
405 | // | |
406 | Float_t ry = mi2/sigmay2; | |
407 | Float_t rz = mj2/sigmaz2; | |
408 | ||
409 | // | |
410 | if ( ( (ry<0.6) || (rz<0.6) ) && fLoop==2) return; | |
94bf739c | 411 | if ( ((ry <1.2) && (rz<1.2)) || (!fRecoParam->GetDoUnfold())) { |
194b0609 | 412 | // |
413 | //if cluster looks like expected or Unfolding not switched on | |
414 | //standard COG is used | |
1c53abe2 | 415 | //+1.2 deviation from expected sigma accepted |
416 | // c.fMax = FitMax(vmatrix,meani,meanj,TMath::Sqrt(sigmay2),TMath::Sqrt(sigmaz2)); | |
417 | ||
418 | meani +=i0; | |
419 | meanj +=j0; | |
420 | //set cluster parameters | |
421 | c.SetQ(sumw); | |
022ee144 | 422 | c.SetPad(meani-2.5); |
5bd7ed29 | 423 | c.SetTimeBin(meanj-3); |
1c53abe2 | 424 | c.SetSigmaY2(mi2); |
425 | c.SetSigmaZ2(mj2); | |
022ee144 | 426 | c.SetType(0); |
03fe1804 | 427 | AddCluster(c,(Float_t*)vmatrix,k); |
1c53abe2 | 428 | return; |
429 | } | |
430 | // | |
431 | //unfolding when neccessary | |
432 | // | |
433 | ||
13116aec | 434 | Float_t * matrix2[7]; //7x7 matrix with digits - indexing i = 0 ..6 j = -3..3 |
435 | Float_t dummy[7]={0,0,0,0,0,0}; | |
1c53abe2 | 436 | for (Int_t di=-3;di<=3;di++){ |
437 | matrix2[di+3] = &bins[k+di*max]; | |
438 | if ((k+di*max)<3) matrix2[di+3] = &dummy[3]; | |
439 | if ((k+di*max)>fMaxBin-3) matrix2[di+3] = &dummy[3]; | |
440 | } | |
441 | Float_t vmatrix2[5][5]; | |
442 | Float_t sumu; | |
443 | Float_t overlap; | |
444 | UnfoldCluster(matrix2,vmatrix2,meani,meanj,sumu,overlap); | |
445 | // | |
446 | // c.fMax = FitMax(vmatrix2,meani,meanj,TMath::Sqrt(sigmay2),TMath::Sqrt(sigmaz2)); | |
447 | meani +=i0; | |
448 | meanj +=j0; | |
449 | //set cluster parameters | |
450 | c.SetQ(sumu); | |
022ee144 | 451 | c.SetPad(meani-2.5); |
452 | c.SetTimeBin(meanj-3); | |
1c53abe2 | 453 | c.SetSigmaY2(mi2); |
454 | c.SetSigmaZ2(mj2); | |
455 | c.SetType(Char_t(overlap)+1); | |
03fe1804 | 456 | AddCluster(c,(Float_t*)vmatrix,k); |
1c53abe2 | 457 | |
458 | //unfolding 2 | |
459 | meani-=i0; | |
460 | meanj-=j0; | |
1c53abe2 | 461 | } |
462 | ||
463 | ||
464 | ||
13116aec | 465 | void AliTPCclustererMI::UnfoldCluster(Float_t * matrix2[7], Float_t recmatrix[5][5], Float_t & meani, Float_t & meanj, |
1c53abe2 | 466 | Float_t & sumu, Float_t & overlap ) |
467 | { | |
468 | // | |
469 | //unfold cluster from input matrix | |
470 | //data corresponding to cluster writen in recmatrix | |
471 | //output meani and meanj | |
472 | ||
473 | //take separatelly y and z | |
474 | ||
475 | Float_t sum3i[7] = {0,0,0,0,0,0,0}; | |
476 | Float_t sum3j[7] = {0,0,0,0,0,0,0}; | |
477 | ||
478 | for (Int_t k =0;k<7;k++) | |
479 | for (Int_t l = -1; l<=1;l++){ | |
480 | sum3i[k]+=matrix2[k][l]; | |
481 | sum3j[k]+=matrix2[l+3][k-3]; | |
482 | } | |
483 | Float_t mratio[3][3]={{1,1,1},{1,1,1},{1,1,1}}; | |
484 | // | |
485 | //unfold y | |
486 | Float_t sum3wi = 0; //charge minus overlap | |
487 | Float_t sum3wio = 0; //full charge | |
488 | Float_t sum3iw = 0; //sum for mean value | |
489 | for (Int_t dk=-1;dk<=1;dk++){ | |
490 | sum3wio+=sum3i[dk+3]; | |
491 | if (dk==0){ | |
492 | sum3wi+=sum3i[dk+3]; | |
493 | } | |
494 | else{ | |
495 | Float_t ratio =1; | |
496 | if ( ( ((sum3i[dk+3]+3)/(sum3i[3]-3))+1 < (sum3i[2*dk+3]-3)/(sum3i[dk+3]+3))|| | |
94bf739c | 497 | (sum3i[dk+3]<=sum3i[2*dk+3] && sum3i[dk+3]>2 )){ |
1c53abe2 | 498 | Float_t xm2 = sum3i[-dk+3]; |
499 | Float_t xm1 = sum3i[+3]; | |
500 | Float_t x1 = sum3i[2*dk+3]; | |
501 | Float_t x2 = sum3i[3*dk+3]; | |
cc5e9db0 | 502 | Float_t w11 = TMath::Max((Float_t)(4.*xm1-xm2),(Float_t)0.000001); |
503 | Float_t w12 = TMath::Max((Float_t)(4 *x1 -x2),(Float_t)0.); | |
1c53abe2 | 504 | ratio = w11/(w11+w12); |
505 | for (Int_t dl=-1;dl<=1;dl++) | |
506 | mratio[dk+1][dl+1] *= ratio; | |
507 | } | |
508 | Float_t amp = sum3i[dk+3]*ratio; | |
509 | sum3wi+=amp; | |
510 | sum3iw+= dk*amp; | |
511 | } | |
512 | } | |
513 | meani = sum3iw/sum3wi; | |
514 | Float_t overlapi = (sum3wio-sum3wi)/sum3wio; | |
515 | ||
516 | ||
517 | ||
518 | //unfold z | |
519 | Float_t sum3wj = 0; //charge minus overlap | |
520 | Float_t sum3wjo = 0; //full charge | |
521 | Float_t sum3jw = 0; //sum for mean value | |
522 | for (Int_t dk=-1;dk<=1;dk++){ | |
523 | sum3wjo+=sum3j[dk+3]; | |
524 | if (dk==0){ | |
525 | sum3wj+=sum3j[dk+3]; | |
526 | } | |
527 | else{ | |
528 | Float_t ratio =1; | |
529 | if ( ( ((sum3j[dk+3]+3)/(sum3j[3]-3))+1 < (sum3j[2*dk+3]-3)/(sum3j[dk+3]+3)) || | |
530 | (sum3j[dk+3]<=sum3j[2*dk+3] && sum3j[dk+3]>2)){ | |
531 | Float_t xm2 = sum3j[-dk+3]; | |
532 | Float_t xm1 = sum3j[+3]; | |
533 | Float_t x1 = sum3j[2*dk+3]; | |
534 | Float_t x2 = sum3j[3*dk+3]; | |
cc5e9db0 | 535 | Float_t w11 = TMath::Max((Float_t)(4.*xm1-xm2),(Float_t)0.000001); |
536 | Float_t w12 = TMath::Max((Float_t)(4 *x1 -x2),(Float_t)0.); | |
1c53abe2 | 537 | ratio = w11/(w11+w12); |
538 | for (Int_t dl=-1;dl<=1;dl++) | |
539 | mratio[dl+1][dk+1] *= ratio; | |
540 | } | |
541 | Float_t amp = sum3j[dk+3]*ratio; | |
542 | sum3wj+=amp; | |
543 | sum3jw+= dk*amp; | |
544 | } | |
545 | } | |
546 | meanj = sum3jw/sum3wj; | |
547 | Float_t overlapj = (sum3wjo-sum3wj)/sum3wjo; | |
548 | overlap = Int_t(100*TMath::Max(overlapi,overlapj)+3); | |
549 | sumu = (sum3wj+sum3wi)/2.; | |
550 | ||
551 | if (overlap ==3) { | |
552 | //if not overlap detected remove everything | |
553 | for (Int_t di =-2; di<=2;di++) | |
554 | for (Int_t dj =-2; dj<=2;dj++){ | |
555 | recmatrix[di+2][dj+2] = matrix2[3+di][dj]; | |
556 | } | |
557 | } | |
558 | else{ | |
559 | for (Int_t di =-1; di<=1;di++) | |
560 | for (Int_t dj =-1; dj<=1;dj++){ | |
561 | Float_t ratio =1; | |
562 | if (mratio[di+1][dj+1]==1){ | |
563 | recmatrix[di+2][dj+2] = matrix2[3+di][dj]; | |
564 | if (TMath::Abs(di)+TMath::Abs(dj)>1){ | |
565 | recmatrix[2*di+2][dj+2] = matrix2[3+2*di][dj]; | |
566 | recmatrix[di+2][2*dj+2] = matrix2[3+di][2*dj]; | |
567 | } | |
568 | recmatrix[2*di+2][2*dj+2] = matrix2[3+2*di][2*dj]; | |
569 | } | |
570 | else | |
571 | { | |
572 | //if we have overlap in direction | |
573 | recmatrix[di+2][dj+2] = mratio[di+1][dj+1]* matrix2[3+di][dj]; | |
574 | if (TMath::Abs(di)+TMath::Abs(dj)>1){ | |
cc5e9db0 | 575 | ratio = TMath::Min((Float_t)(recmatrix[di+2][dj+2]/(matrix2[3+0*di][1*dj]+1)),(Float_t)1.); |
1c53abe2 | 576 | recmatrix[2*di+2][dj+2] = ratio*recmatrix[di+2][dj+2]; |
577 | // | |
cc5e9db0 | 578 | ratio = TMath::Min((Float_t)(recmatrix[di+2][dj+2]/(matrix2[3+1*di][0*dj]+1)),(Float_t)1.); |
1c53abe2 | 579 | recmatrix[di+2][2*dj+2] = ratio*recmatrix[di+2][dj+2]; |
580 | } | |
581 | else{ | |
582 | ratio = recmatrix[di+2][dj+2]/matrix2[3][0]; | |
583 | recmatrix[2*di+2][2*dj+2] = ratio*recmatrix[di+2][dj+2]; | |
584 | } | |
585 | } | |
586 | } | |
587 | } | |
1c53abe2 | 588 | |
589 | } | |
590 | ||
591 | Float_t AliTPCclustererMI::FitMax(Float_t vmatrix[5][5], Float_t y, Float_t z, Float_t sigmay, Float_t sigmaz) | |
592 | { | |
593 | // | |
594 | // estimate max | |
595 | Float_t sumteor= 0; | |
596 | Float_t sumamp = 0; | |
597 | ||
598 | for (Int_t di = -1;di<=1;di++) | |
599 | for (Int_t dj = -1;dj<=1;dj++){ | |
600 | if (vmatrix[2+di][2+dj]>2){ | |
601 | Float_t teor = TMath::Gaus(di,y,sigmay*1.2)*TMath::Gaus(dj,z,sigmaz*1.2); | |
602 | sumteor += teor*vmatrix[2+di][2+dj]; | |
603 | sumamp += vmatrix[2+di][2+dj]*vmatrix[2+di][2+dj]; | |
604 | } | |
605 | } | |
606 | Float_t max = sumamp/sumteor; | |
607 | return max; | |
608 | } | |
609 | ||
12ed89e4 | 610 | void AliTPCclustererMI::AddCluster(AliTPCclusterMI &c, Float_t * /*matrix*/, Int_t /*pos*/){ |
1c53abe2 | 611 | // |
1c53abe2 | 612 | // |
022ee144 | 613 | // Transform cluster to the rotated global coordinata |
614 | // Assign labels to the cluster | |
615 | // add the cluster to the array | |
616 | // for more details - See AliTPCTranform::Transform(x,i,0,1) | |
617 | Float_t meani = c.GetPad(); | |
618 | Float_t meanj = c.GetTimeBin(); | |
1c53abe2 | 619 | |
022ee144 | 620 | Int_t ki = TMath::Nint(meani); |
1c53abe2 | 621 | if (ki<0) ki=0; |
622 | if (ki>=fMaxPad) ki = fMaxPad-1; | |
022ee144 | 623 | Int_t kj = TMath::Nint(meanj); |
1c53abe2 | 624 | if (kj<0) kj=0; |
625 | if (kj>=fMaxTime-3) kj=fMaxTime-4; | |
022ee144 | 626 | // ki and kj shifted as integers coordinata |
f8aae377 | 627 | if (fRowDig) { |
628 | c.SetLabel(fRowDig->GetTrackIDFast(kj,ki,0)-2,0); | |
629 | c.SetLabel(fRowDig->GetTrackIDFast(kj,ki,1)-2,1); | |
630 | c.SetLabel(fRowDig->GetTrackIDFast(kj,ki,2)-2,2); | |
631 | } | |
1c53abe2 | 632 | |
022ee144 | 633 | c.SetRow(fRow); |
634 | c.SetDetector(fSector); | |
1c53abe2 | 635 | Float_t s2 = c.GetSigmaY2(); |
636 | Float_t w=fParam->GetPadPitchWidth(fSector); | |
1c53abe2 | 637 | c.SetSigmaY2(s2*w*w); |
638 | s2 = c.GetSigmaZ2(); | |
022ee144 | 639 | c.SetSigmaZ2(s2*fZWidth*fZWidth); |
640 | // | |
641 | // | |
642 | // | |
239f39b1 | 643 | |
022ee144 | 644 | AliTPCTransform *transform = AliTPCcalibDB::Instance()->GetTransform() ; |
645 | if (!transform) { | |
239f39b1 | 646 | AliFatal("Tranformations not in calibDB"); |
35e039dc | 647 | return; |
022ee144 | 648 | } |
239f39b1 | 649 | transform->SetCurrentRecoParam((AliTPCRecoParam*)fRecoParam); |
022ee144 | 650 | Double_t x[3]={c.GetRow(),c.GetPad(),c.GetTimeBin()}; |
651 | Int_t i[1]={fSector}; | |
652 | transform->Transform(x,i,0,1); | |
653 | c.SetX(x[0]); | |
654 | c.SetY(x[1]); | |
655 | c.SetZ(x[2]); | |
656 | // | |
657 | // | |
1c53abe2 | 658 | if (ki<=1 || ki>=fMaxPad-1 || kj==1 || kj==fMaxTime-2) { |
1c53abe2 | 659 | c.SetType(-(c.GetType()+3)); //edge clusters |
660 | } | |
661 | if (fLoop==2) c.SetType(100); | |
eea36fac | 662 | if (!AcceptCluster(&c)) return; |
1c53abe2 | 663 | |
98ee6d31 | 664 | // select output |
665 | TClonesArray * arr = 0; | |
666 | AliTPCclusterMI * cl = 0; | |
667 | ||
668 | if(fBClonesArray==kFALSE) { | |
669 | arr = fRowCl->GetArray(); | |
670 | cl = new ((*arr)[fNcluster]) AliTPCclusterMI(c); | |
671 | } else { | |
672 | cl = new ((*fOutputClonesArray)[fNclusters+fNcluster]) AliTPCclusterMI(c); | |
673 | } | |
674 | ||
d101caf3 | 675 | // if (fRecoParam->DumpSignal() &&matrix ) { |
676 | // Int_t nbins=0; | |
677 | // Float_t *graph =0; | |
678 | // if (fRecoParam->GetCalcPedestal() && cl->GetMax()>fRecoParam->GetDumpAmplitudeMin() &&fBDumpSignal){ | |
679 | // nbins = fMaxTime; | |
680 | // graph = &(fBins[fMaxTime*(pos/fMaxTime)]); | |
681 | // } | |
682 | // AliTPCclusterInfo * info = new AliTPCclusterInfo(matrix,nbins,graph); | |
683 | // cl->SetInfo(info); | |
684 | // } | |
b127a65f | 685 | if (!fRecoParam->DumpSignal()) { |
686 | cl->SetInfo(0); | |
687 | } | |
eea36fac | 688 | |
689 | if (AliTPCReconstructor::StreamLevel()>1) { | |
b7a563f9 | 690 | Float_t xyz[3]; |
691 | cl->GetGlobalXYZ(xyz); | |
eea36fac | 692 | (*fDebugStreamer)<<"Clusters"<< |
693 | "Cl.="<<cl<< | |
b7a563f9 | 694 | "gx="<<xyz[0]<< |
695 | "gy="<<xyz[1]<< | |
696 | "gz="<<xyz[2]<< | |
eea36fac | 697 | "\n"; |
698 | } | |
1c53abe2 | 699 | |
700 | fNcluster++; | |
701 | } | |
702 | ||
703 | ||
704 | //_____________________________________________________________________________ | |
f8aae377 | 705 | void AliTPCclustererMI::Digits2Clusters() |
1c53abe2 | 706 | { |
707 | //----------------------------------------------------------------- | |
708 | // This is a simple cluster finder. | |
709 | //----------------------------------------------------------------- | |
1c53abe2 | 710 | |
f8aae377 | 711 | if (!fInput) { |
712 | Error("Digits2Clusters", "input tree not initialised"); | |
1c53abe2 | 713 | return; |
714 | } | |
b7a563f9 | 715 | fRecoParam = AliTPCReconstructor::GetRecoParam(); |
716 | if (!fRecoParam){ | |
717 | AliFatal("Can not get the reconstruction parameters"); | |
718 | } | |
719 | if(AliTPCReconstructor::StreamLevel()>5) { | |
720 | AliInfo("Parameter Dumps"); | |
721 | fParam->Dump(); | |
722 | fRecoParam->Dump(); | |
723 | } | |
724 | ||
53a11d77 | 725 | //----------------------------------------------------------------- |
726 | // Use HLT clusters | |
727 | //----------------------------------------------------------------- | |
9abc660b | 728 | fUseHLTClusters = fRecoParam->GetUseHLTClusters(); |
729 | ||
49332743 | 730 | AliInfo(Form("Usage of HLT clusters in TPC reconstruction : %d",fUseHLTClusters)); |
731 | ||
732 | if (fUseHLTClusters == 3 || fUseHLTClusters == 4) { | |
53a11d77 | 733 | AliInfo("Using HLT clusters for TPC off-line reconstruction"); |
734 | fZWidth = fParam->GetZWidth(); | |
9abc660b | 735 | Int_t iResult = ReadHLTClusters(); |
53a11d77 | 736 | |
9abc660b | 737 | // HLT clusters present |
bbdbe223 | 738 | if (iResult >= 0 && fNclusters > 0) |
739 | return; | |
740 | ||
9abc660b | 741 | // HLT clusters not present |
bbdbe223 | 742 | if (iResult < 0 || fNclusters == 0) { |
743 | if (fUseHLTClusters == 3) { | |
744 | AliError("No HLT clusters present, but requested."); | |
9abc660b | 745 | return; |
746 | } | |
bbdbe223 | 747 | else { |
748 | AliInfo("Now trying to read TPC RAW"); | |
749 | } | |
9abc660b | 750 | } |
751 | // Some other problem during cluster reading | |
752 | else { | |
753 | AliWarning("Some problem while unpacking of HLT clusters."); | |
754 | return; | |
755 | } | |
49332743 | 756 | } // if (fUseHLTClusters == 3 || fUseHLTClusters == 4) { |
53a11d77 | 757 | |
758 | //----------------------------------------------------------------- | |
759 | // Run TPC off-line clusterer | |
760 | //----------------------------------------------------------------- | |
13116aec | 761 | AliTPCCalPad * gainTPC = AliTPCcalibDB::Instance()->GetPadGainFactor(); |
940ed1f0 | 762 | AliTPCCalPad * noiseTPC = AliTPCcalibDB::Instance()->GetPadNoise(); |
1c53abe2 | 763 | AliSimDigits digarr, *dummy=&digarr; |
764 | fRowDig = dummy; | |
765 | fInput->GetBranch("Segment")->SetAddress(&dummy); | |
766 | Stat_t nentries = fInput->GetEntries(); | |
767 | ||
daac2a58 | 768 | fMaxTime=fRecoParam->GetLastBin()+6; // add 3 virtual time bins before and 3 after |
1c53abe2 | 769 | |
1c53abe2 | 770 | Int_t nclusters = 0; |
13116aec | 771 | |
1c53abe2 | 772 | for (Int_t n=0; n<nentries; n++) { |
773 | fInput->GetEvent(n); | |
508541c7 | 774 | if (!fParam->AdjustSectorRow(digarr.GetID(),fSector,fRow)) { |
1c53abe2 | 775 | cerr<<"AliTPC warning: invalid segment ID ! "<<digarr.GetID()<<endl; |
776 | continue; | |
777 | } | |
508541c7 | 778 | Int_t row = fRow; |
13116aec | 779 | AliTPCCalROC * gainROC = gainTPC->GetCalROC(fSector); // pad gains per given sector |
940ed1f0 | 780 | AliTPCCalROC * noiseROC = noiseTPC->GetCalROC(fSector); // noise per given sector |
13116aec | 781 | // |
1c53abe2 | 782 | |
ebe95b38 | 783 | fRowCl->SetID(digarr.GetID()); |
784 | if (fOutput) fOutput->GetBranch("Segment")->SetAddress(&fRowCl); | |
f8aae377 | 785 | fRx=fParam->GetPadRowRadii(fSector,row); |
1c53abe2 | 786 | |
787 | ||
f8aae377 | 788 | const Int_t kNIS=fParam->GetNInnerSector(), kNOS=fParam->GetNOuterSector(); |
1c53abe2 | 789 | fZWidth = fParam->GetZWidth(); |
790 | if (fSector < kNIS) { | |
f8aae377 | 791 | fMaxPad = fParam->GetNPadsLow(row); |
bbdbe223 | 792 | fSign = (fSector < kNIS/2) ? 1 : -1; |
f8aae377 | 793 | fPadLength = fParam->GetPadPitchLength(fSector,row); |
794 | fPadWidth = fParam->GetPadPitchWidth(); | |
1c53abe2 | 795 | } else { |
f8aae377 | 796 | fMaxPad = fParam->GetNPadsUp(row); |
1c53abe2 | 797 | fSign = ((fSector-kNIS) < kNOS/2) ? 1 : -1; |
f8aae377 | 798 | fPadLength = fParam->GetPadPitchLength(fSector,row); |
799 | fPadWidth = fParam->GetPadPitchWidth(); | |
1c53abe2 | 800 | } |
801 | ||
802 | ||
803 | fMaxBin=fMaxTime*(fMaxPad+6); // add 3 virtual pads before and 3 after | |
13116aec | 804 | fBins =new Float_t[fMaxBin]; |
5b33a7f5 | 805 | fSigBins =new Int_t[fMaxBin]; |
806 | fNSigBins = 0; | |
13116aec | 807 | memset(fBins,0,sizeof(Float_t)*fMaxBin); |
1c53abe2 | 808 | |
809 | if (digarr.First()) //MI change | |
810 | do { | |
13116aec | 811 | Float_t dig=digarr.CurrentDigit(); |
f8aae377 | 812 | if (dig<=fParam->GetZeroSup()) continue; |
1c53abe2 | 813 | Int_t j=digarr.CurrentRow()+3, i=digarr.CurrentColumn()+3; |
9d4f75a9 | 814 | Float_t gain = gainROC->GetValue(row,digarr.CurrentColumn()); |
5b33a7f5 | 815 | Int_t bin = i*fMaxTime+j; |
d6021085 | 816 | if (gain>0){ |
817 | fBins[bin]=dig/gain; | |
818 | }else{ | |
819 | fBins[bin]=0; | |
820 | } | |
5b33a7f5 | 821 | fSigBins[fNSigBins++]=bin; |
1c53abe2 | 822 | } while (digarr.Next()); |
823 | digarr.ExpandTrackBuffer(); | |
824 | ||
940ed1f0 | 825 | FindClusters(noiseROC); |
ebe95b38 | 826 | FillRow(); |
e7de6656 | 827 | fRowCl->GetArray()->Clear("C"); |
88cb7938 | 828 | nclusters+=fNcluster; |
98ee6d31 | 829 | |
5b33a7f5 | 830 | delete[] fBins; |
831 | delete[] fSigBins; | |
88cb7938 | 832 | } |
b7a563f9 | 833 | |
19dd5b2f | 834 | Info("Digits2Clusters", "Number of found clusters : %d", nclusters); |
bbdbe223 | 835 | |
836 | if (fUseHLTClusters == 2 && nclusters == 0) { | |
837 | AliInfo("No clusters from TPC Raw data, now trying to read HLT clusters."); | |
838 | ||
839 | fZWidth = fParam->GetZWidth(); | |
840 | ReadHLTClusters(); | |
841 | } | |
f8aae377 | 842 | } |
843 | ||
e7034a8b | 844 | void AliTPCclustererMI::ProcessSectorData(){ |
7c9528d8 | 845 | // |
846 | // Process the data for the current sector | |
847 | // | |
848 | ||
849 | AliTPCCalPad * pedestalTPC = AliTPCcalibDB::Instance()->GetPedestals(); | |
850 | AliTPCCalPad * noiseTPC = AliTPCcalibDB::Instance()->GetPadNoise(); | |
851 | AliTPCCalROC * pedestalROC = pedestalTPC->GetCalROC(fSector); // pedestal per given sector | |
852 | AliTPCCalROC * noiseROC = noiseTPC->GetCalROC(fSector); // noise per given sector | |
853 | //check the presence of the calibration | |
854 | if (!noiseROC ||!pedestalROC ) { | |
855 | AliError(Form("Missing calibration per sector\t%d\n",fSector)); | |
856 | return; | |
857 | } | |
858 | Int_t nRows=fParam->GetNRow(fSector); | |
859 | Bool_t calcPedestal = fRecoParam->GetCalcPedestal(); | |
860 | Int_t zeroSup = fParam->GetZeroSup(); | |
861 | // if (calcPedestal) { | |
862 | if (kFALSE ) { | |
863 | for (Int_t iRow = 0; iRow < nRows; iRow++) { | |
864 | Int_t maxPad = fParam->GetNPads(fSector, iRow); | |
865 | ||
866 | for (Int_t iPad = 3; iPad < maxPad + 3; iPad++) { | |
867 | // | |
868 | // Temporary fix for data production - !!!! MARIAN | |
869 | // The noise calibration should take mean and RMS - currently the Gaussian fit used | |
870 | // In case of double peak - the pad should be rejected | |
871 | // | |
872 | // Line mean - if more than given digits over threshold - make a noise calculation | |
873 | // and pedestal substration | |
e7034a8b | 874 | if (!calcPedestal && fAllBins[iRow][iPad*fMaxTime+0]<50) continue; |
7c9528d8 | 875 | // |
e7034a8b | 876 | if (fAllBins[iRow][iPad*fMaxTime+0] <1 ) continue; // no data |
877 | Float_t *p = &fAllBins[iRow][iPad*fMaxTime+3]; | |
7c9528d8 | 878 | //Float_t pedestal = TMath::Median(fMaxTime, p); |
879 | Int_t id[3] = {fSector, iRow, iPad-3}; | |
880 | // calib values | |
881 | Double_t rmsCalib= noiseROC->GetValue(iRow,iPad-3); | |
882 | Double_t pedestalCalib = pedestalROC->GetValue(iRow,iPad-3); | |
883 | Double_t rmsEvent = rmsCalib; | |
884 | Double_t pedestalEvent = pedestalCalib; | |
885 | ProcesSignal(p, fMaxTime, id, rmsEvent, pedestalEvent); | |
886 | if (rmsEvent<rmsCalib) rmsEvent = rmsCalib; // take worst scenario | |
887 | if (TMath::Abs(pedestalEvent-pedestalCalib)<1.0) pedestalEvent = pedestalCalib; | |
888 | ||
889 | // | |
890 | for (Int_t iTimeBin = 0; iTimeBin < fMaxTime; iTimeBin++) { | |
891 | Int_t bin = iPad*fMaxTime+iTimeBin; | |
e7034a8b | 892 | fAllBins[iRow][bin] -= pedestalEvent; |
7c9528d8 | 893 | if (iTimeBin < fRecoParam->GetFirstBin()) |
e7034a8b | 894 | fAllBins[iRow][bin] = 0; |
7c9528d8 | 895 | if (iTimeBin > fRecoParam->GetLastBin()) |
e7034a8b | 896 | fAllBins[iRow][bin] = 0; |
897 | if (fAllBins[iRow][iPad*fMaxTime+iTimeBin] < zeroSup) | |
898 | fAllBins[iRow][bin] = 0; | |
899 | if (fAllBins[iRow][bin] < 3.0*rmsEvent) // 3 sigma cut on RMS | |
900 | fAllBins[iRow][bin] = 0; | |
901 | if (fAllBins[iRow][bin]) fAllSigBins[iRow][fAllNSigBins[iRow]++] = bin; | |
7c9528d8 | 902 | } |
903 | } | |
904 | } | |
905 | } | |
906 | ||
6fbe1e5c | 907 | if (AliTPCReconstructor::StreamLevel()>5) { |
7c9528d8 | 908 | for (Int_t iRow = 0; iRow < nRows; iRow++) { |
909 | Int_t maxPad = fParam->GetNPads(fSector,iRow); | |
910 | ||
911 | for (Int_t iPad = 3; iPad < maxPad + 3; iPad++) { | |
912 | for (Int_t iTimeBin = 0; iTimeBin < fMaxTime; iTimeBin++) { | |
913 | Int_t bin = iPad*fMaxTime+iTimeBin; | |
e7034a8b | 914 | Float_t signal = fAllBins[iRow][bin]; |
7c9528d8 | 915 | if (AliTPCReconstructor::StreamLevel()>3 && signal>3) { |
916 | Double_t x[]={iRow,iPad-3,iTimeBin-3}; | |
917 | Int_t i[]={fSector}; | |
918 | AliTPCTransform trafo; | |
919 | trafo.Transform(x,i,0,1); | |
920 | Double_t gx[3]={x[0],x[1],x[2]}; | |
921 | trafo.RotatedGlobal2Global(fSector,gx); | |
e7034a8b | 922 | // fAllSigBins[iRow][fAllNSigBins[iRow]++] |
923 | Int_t rowsigBins = fAllNSigBins[iRow]; | |
924 | Int_t first=fAllSigBins[iRow][0]; | |
7c9528d8 | 925 | Int_t last= 0; |
e7034a8b | 926 | // if (rowsigBins>0) fAllSigBins[iRow][fAllNSigBins[iRow]-1]; |
7c9528d8 | 927 | |
6fbe1e5c | 928 | if (AliTPCReconstructor::StreamLevel()>5) { |
7c9528d8 | 929 | (*fDebugStreamer)<<"Digits"<< |
930 | "sec="<<fSector<< | |
931 | "row="<<iRow<< | |
932 | "pad="<<iPad<< | |
933 | "time="<<iTimeBin<< | |
934 | "sig="<<signal<< | |
935 | "x="<<x[0]<< | |
936 | "y="<<x[1]<< | |
937 | "z="<<x[2]<< | |
938 | "gx="<<gx[0]<< | |
939 | "gy="<<gx[1]<< | |
940 | "gz="<<gx[2]<< | |
941 | // | |
942 | "rowsigBins="<<rowsigBins<< | |
943 | "first="<<first<< | |
944 | "last="<<last<< | |
945 | "\n"; | |
946 | } | |
947 | } | |
948 | } | |
949 | } | |
950 | } | |
951 | } | |
952 | ||
953 | // Now loop over rows and find clusters | |
954 | for (fRow = 0; fRow < nRows; fRow++) { | |
955 | fRowCl->SetID(fParam->GetIndex(fSector, fRow)); | |
956 | if (fOutput) fOutput->GetBranch("Segment")->SetAddress(&fRowCl); | |
957 | ||
958 | fRx = fParam->GetPadRowRadii(fSector, fRow); | |
959 | fPadLength = fParam->GetPadPitchLength(fSector, fRow); | |
960 | fPadWidth = fParam->GetPadPitchWidth(); | |
961 | fMaxPad = fParam->GetNPads(fSector,fRow); | |
962 | fMaxBin = fMaxTime*(fMaxPad+6); // add 3 virtual pads before and 3 after | |
963 | ||
e7034a8b | 964 | fBins = fAllBins[fRow]; |
965 | fSigBins = fAllSigBins[fRow]; | |
966 | fNSigBins = fAllNSigBins[fRow]; | |
7c9528d8 | 967 | |
968 | FindClusters(noiseROC); | |
969 | ||
970 | FillRow(); | |
e7de6656 | 971 | if(fBClonesArray == kFALSE) fRowCl->GetArray()->Clear("C"); |
7c9528d8 | 972 | fNclusters += fNcluster; |
973 | ||
974 | } // End of loop to find clusters | |
975 | } | |
976 | ||
977 | ||
f8aae377 | 978 | void AliTPCclustererMI::Digits2Clusters(AliRawReader* rawReader) |
979 | { | |
980 | //----------------------------------------------------------------- | |
22c352f8 | 981 | // This is a cluster finder for the TPC raw data. |
982 | // The method assumes NO ordering of the altro channels. | |
983 | // The pedestal subtraction can be switched on and off | |
984 | // using an option of the TPC reconstructor | |
f8aae377 | 985 | //----------------------------------------------------------------- |
b7a563f9 | 986 | fRecoParam = AliTPCReconstructor::GetRecoParam(); |
987 | if (!fRecoParam){ | |
988 | AliFatal("Can not get the reconstruction parameters"); | |
989 | } | |
990 | if(AliTPCReconstructor::StreamLevel()>5) { | |
991 | AliInfo("Parameter Dumps"); | |
992 | fParam->Dump(); | |
993 | fRecoParam->Dump(); | |
994 | } | |
f8aae377 | 995 | fRowDig = NULL; |
e7034a8b | 996 | |
53a11d77 | 997 | //----------------------------------------------------------------- |
998 | // Use HLT clusters | |
999 | //----------------------------------------------------------------- | |
9abc660b | 1000 | fUseHLTClusters = fRecoParam->GetUseHLTClusters(); |
1001 | ||
49332743 | 1002 | AliInfo(Form("Usage of HLT clusters in TPC reconstruction : %d",fUseHLTClusters)); |
1003 | ||
1004 | if (fUseHLTClusters == 3 || fUseHLTClusters == 4) { | |
53a11d77 | 1005 | AliInfo("Using HLT clusters for TPC off-line reconstruction"); |
1006 | fZWidth = fParam->GetZWidth(); | |
9abc660b | 1007 | Int_t iResult = ReadHLTClusters(); |
53a11d77 | 1008 | |
9abc660b | 1009 | // HLT clusters present |
bbdbe223 | 1010 | if (iResult >= 0 && fNclusters > 0) |
9abc660b | 1011 | return; |
bbdbe223 | 1012 | |
9abc660b | 1013 | // HLT clusters not present |
bbdbe223 | 1014 | if (iResult < 0 || fNclusters == 0) { |
1015 | if (fUseHLTClusters == 3) { | |
1016 | AliError("No HLT clusters present, but requested."); | |
9abc660b | 1017 | return; |
1018 | } | |
bbdbe223 | 1019 | else { |
1020 | AliInfo("Now trying to read TPC RAW"); | |
1021 | } | |
9abc660b | 1022 | } |
1023 | // Some other problem during cluster reading | |
1024 | else { | |
1025 | AliWarning("Some problem while unpacking of HLT clusters."); | |
1026 | return; | |
1027 | } | |
49332743 | 1028 | } // if (fUseHLTClusters == 3 || fUseHLTClusters == 4) { |
53a11d77 | 1029 | |
1030 | //----------------------------------------------------------------- | |
1031 | // Run TPC off-line clusterer | |
1032 | //----------------------------------------------------------------- | |
22c352f8 | 1033 | AliTPCCalPad * gainTPC = AliTPCcalibDB::Instance()->GetPadGainFactor(); |
7c9528d8 | 1034 | AliTPCAltroMapping** mapping =AliTPCcalibDB::Instance()->GetMapping(); |
1035 | // | |
1036 | AliTPCRawStreamV3 input(rawReader,(AliAltroMapping**)mapping); | |
1037 | fEventHeader = (AliRawEventHeaderBase*)rawReader->GetEventHeader(); | |
1038 | if (fEventHeader){ | |
1039 | fTimeStamp = fEventHeader->Get("Timestamp"); | |
1040 | fEventType = fEventHeader->Get("Type"); | |
fefec90f | 1041 | AliTPCTransform *transform = AliTPCcalibDB::Instance()->GetTransform() ; |
1042 | transform->SetCurrentTimeStamp(fTimeStamp); | |
1043 | transform->SetCurrentRun(rawReader->GetRunNumber()); | |
7c9528d8 | 1044 | } |
1045 | ||
1046 | // creaate one TClonesArray for all clusters | |
1047 | if(fBClonesArray && !fOutputClonesArray) fOutputClonesArray = new TClonesArray("AliTPCclusterMI",1000); | |
1048 | // reset counter | |
1049 | fNclusters = 0; | |
1050 | ||
1051 | fMaxTime = fRecoParam->GetLastBin() + 6; // add 3 virtual time bins before and 3 after | |
1052 | // const Int_t kNIS = fParam->GetNInnerSector(); | |
1053 | // const Int_t kNOS = fParam->GetNOuterSector(); | |
1054 | // const Int_t kNS = kNIS + kNOS; | |
1055 | fZWidth = fParam->GetZWidth(); | |
1056 | Int_t zeroSup = fParam->GetZeroSup(); | |
1057 | // | |
e7034a8b | 1058 | // Clean-up |
7c9528d8 | 1059 | // |
e7034a8b | 1060 | AliTPCROC * roc = AliTPCROC::Instance(); |
7c9528d8 | 1061 | Int_t nRowsMax = roc->GetNRows(roc->GetNSector()-1); |
1062 | Int_t nPadsMax = roc->GetNPads(roc->GetNSector()-1,nRowsMax-1); | |
7c9528d8 | 1063 | for (Int_t iRow = 0; iRow < nRowsMax; iRow++) { |
1064 | // | |
1065 | Int_t maxBin = fMaxTime*(nPadsMax+6); // add 3 virtual pads before and 3 after | |
e7034a8b | 1066 | memset(fAllBins[iRow],0,sizeof(Float_t)*maxBin); |
1067 | fAllNSigBins[iRow]=0; | |
7c9528d8 | 1068 | } |
1069 | ||
1070 | Int_t prevSector=-1; | |
1071 | rawReader->Reset(); | |
1072 | Int_t digCounter=0; | |
1073 | // | |
1074 | // Loop over DDLs | |
1075 | // | |
1076 | const Int_t kNIS = fParam->GetNInnerSector(); | |
1077 | const Int_t kNOS = fParam->GetNOuterSector(); | |
1078 | const Int_t kNS = kNIS + kNOS; | |
1079 | ||
1080 | for(fSector = 0; fSector < kNS; fSector++) { | |
1081 | ||
1082 | Int_t nRows = 0; | |
1083 | Int_t nDDLs = 0, indexDDL = 0; | |
1084 | if (fSector < kNIS) { | |
1085 | nRows = fParam->GetNRowLow(); | |
1086 | fSign = (fSector < kNIS/2) ? 1 : -1; | |
1087 | nDDLs = 2; | |
1088 | indexDDL = fSector * 2; | |
1089 | } | |
1090 | else { | |
1091 | nRows = fParam->GetNRowUp(); | |
1092 | fSign = ((fSector-kNIS) < kNOS/2) ? 1 : -1; | |
1093 | nDDLs = 4; | |
1094 | indexDDL = (fSector-kNIS) * 4 + kNIS * 2; | |
1095 | } | |
1096 | ||
1097 | // load the raw data for corresponding DDLs | |
1098 | rawReader->Reset(); | |
1099 | rawReader->Select("TPC",indexDDL,indexDDL+nDDLs-1); | |
1100 | ||
1101 | while (input.NextDDL()){ | |
1102 | if (input.GetSector() != fSector) | |
1103 | AliFatal(Form("Sector index mismatch ! Expected (%d), but got (%d) !",fSector,input.GetSector())); | |
1104 | ||
fefec90f | 1105 | //Int_t nRows = fParam->GetNRow(fSector); |
7c9528d8 | 1106 | |
1107 | AliTPCCalROC * gainROC = gainTPC->GetCalROC(fSector); // pad gains per given sector | |
1108 | // Begin loop over altro data | |
1109 | Bool_t calcPedestal = fRecoParam->GetCalcPedestal(); | |
1110 | Float_t gain =1; | |
1111 | ||
1112 | //loop over pads | |
1113 | while ( input.NextChannel() ) { | |
1114 | Int_t iRow = input.GetRow(); | |
1115 | if (iRow < 0){ | |
1116 | continue; | |
1117 | } | |
1118 | if (iRow >= nRows){ | |
1119 | AliError(Form("Pad-row index (%d) outside the range (%d -> %d) !", | |
1120 | iRow, 0, nRows -1)); | |
1121 | continue; | |
1122 | } | |
1123 | //pad | |
1124 | Int_t iPad = input.GetPad(); | |
1125 | if (iPad < 0 || iPad >= nPadsMax) { | |
1126 | AliError(Form("Pad index (%d) outside the range (%d -> %d) !", | |
1127 | iPad, 0, nPadsMax-1)); | |
1128 | continue; | |
1129 | } | |
1130 | gain = gainROC->GetValue(iRow,iPad); | |
1131 | iPad+=3; | |
1132 | ||
1133 | //loop over bunches | |
1134 | while ( input.NextBunch() ){ | |
1135 | Int_t startTbin = (Int_t)input.GetStartTimeBin(); | |
1136 | Int_t bunchlength = (Int_t)input.GetBunchLength(); | |
1137 | const UShort_t *sig = input.GetSignals(); | |
1138 | for (Int_t iTime = 0; iTime<bunchlength; iTime++){ | |
1139 | Int_t iTimeBin=startTbin-iTime; | |
1140 | if ( iTimeBin < fRecoParam->GetFirstBin() || iTimeBin >= fRecoParam->GetLastBin()){ | |
1141 | continue; | |
1142 | AliFatal(Form("Timebin index (%d) outside the range (%d -> %d) !", | |
1143 | iTimeBin, 0, iTimeBin -1)); | |
1144 | } | |
1145 | iTimeBin+=3; | |
1146 | //signal | |
1147 | Float_t signal=(Float_t)sig[iTime]; | |
1148 | if (!calcPedestal && signal <= zeroSup) continue; | |
1149 | ||
1150 | if (!calcPedestal) { | |
1151 | Int_t bin = iPad*fMaxTime+iTimeBin; | |
1152 | if (gain>0){ | |
e7034a8b | 1153 | fAllBins[iRow][bin] = signal/gain; |
7c9528d8 | 1154 | }else{ |
e7034a8b | 1155 | fAllBins[iRow][bin] =0; |
7c9528d8 | 1156 | } |
e7034a8b | 1157 | fAllSigBins[iRow][fAllNSigBins[iRow]++] = bin; |
7c9528d8 | 1158 | }else{ |
e7034a8b | 1159 | fAllBins[iRow][iPad*fMaxTime+iTimeBin] = signal; |
7c9528d8 | 1160 | } |
e7034a8b | 1161 | fAllBins[iRow][iPad*fMaxTime+0]+=1.; // pad with signal |
7c9528d8 | 1162 | |
1163 | // Temporary | |
1164 | digCounter++; | |
1165 | }// end loop signals in bunch | |
1166 | }// end loop bunches | |
1167 | } // end loop pads | |
1168 | // | |
1169 | // | |
1170 | // | |
1171 | // | |
1172 | // Now loop over rows and perform pedestal subtraction | |
1173 | if (digCounter==0) continue; | |
1174 | } // End of loop over sectors | |
1175 | //process last sector | |
1176 | if ( digCounter>0 ){ | |
e7034a8b | 1177 | ProcessSectorData(); |
7c9528d8 | 1178 | for (Int_t iRow = 0; iRow < fParam->GetNRow(fSector); iRow++) { |
1179 | Int_t maxPad = fParam->GetNPads(fSector,iRow); | |
1180 | Int_t maxBin = fMaxTime*(maxPad+6); // add 3 virtual pads before and 3 after | |
e7034a8b | 1181 | memset(fAllBins[iRow],0,sizeof(Float_t)*maxBin); |
1182 | fAllNSigBins[iRow] = 0; | |
7c9528d8 | 1183 | } |
1184 | prevSector=fSector; | |
1185 | digCounter=0; | |
1186 | } | |
1187 | } | |
1188 | ||
7c9528d8 | 1189 | if (rawReader->GetEventId() && fOutput ){ |
3a4b0aed | 1190 | Info("Digits2Clusters", "File %s Event\t%u\tNumber of found clusters : %d\n", fOutput->GetName(),*(rawReader->GetEventId()), fNclusters); |
7c9528d8 | 1191 | } |
1192 | ||
1193 | if(rawReader->GetEventId()) { | |
3a4b0aed | 1194 | Info("Digits2Clusters", "Event\t%u\tNumber of found clusters : %d\n",*(rawReader->GetEventId()), fNclusters); |
7c9528d8 | 1195 | } |
1196 | ||
1197 | if(fBClonesArray) { | |
1198 | //Info("Digits2Clusters", "Number of found clusters : %d\n",fOutputClonesArray->GetEntriesFast()); | |
1199 | } | |
bbdbe223 | 1200 | |
1201 | if (fUseHLTClusters == 2 && fNclusters == 0) { | |
1202 | AliInfo("No clusters from TPC Raw data, now trying to read HLT clusters."); | |
1203 | ||
1204 | fZWidth = fParam->GetZWidth(); | |
1205 | ReadHLTClusters(); | |
1206 | } | |
7c9528d8 | 1207 | } |
1208 | ||
1209 | ||
1210 | ||
1211 | ||
1212 | ||
1213 | void AliTPCclustererMI::Digits2ClustersOld | |
1214 | (AliRawReader* rawReader) | |
1215 | { | |
1216 | //----------------------------------------------------------------- | |
1217 | // This is a cluster finder for the TPC raw data. | |
1218 | // The method assumes NO ordering of the altro channels. | |
1219 | // The pedestal subtraction can be switched on and off | |
1220 | // using an option of the TPC reconstructor | |
1221 | //----------------------------------------------------------------- | |
1222 | fRecoParam = AliTPCReconstructor::GetRecoParam(); | |
1223 | if (!fRecoParam){ | |
1224 | AliFatal("Can not get the reconstruction parameters"); | |
1225 | } | |
1226 | if(AliTPCReconstructor::StreamLevel()>5) { | |
1227 | AliInfo("Parameter Dumps"); | |
1228 | fParam->Dump(); | |
1229 | fRecoParam->Dump(); | |
1230 | } | |
1231 | fRowDig = NULL; | |
e7034a8b | 1232 | |
7c9528d8 | 1233 | AliTPCCalPad * gainTPC = AliTPCcalibDB::Instance()->GetPadGainFactor(); |
d6834f5f | 1234 | AliTPCAltroMapping** mapping =AliTPCcalibDB::Instance()->GetMapping(); |
1235 | // | |
1236 | AliTPCRawStream input(rawReader,(AliAltroMapping**)mapping); | |
ef4ad662 | 1237 | fEventHeader = (AliRawEventHeaderBase*)rawReader->GetEventHeader(); |
1238 | if (fEventHeader){ | |
1239 | fTimeStamp = fEventHeader->Get("Timestamp"); | |
1240 | fEventType = fEventHeader->Get("Type"); | |
1241 | } | |
1242 | ||
98ee6d31 | 1243 | // creaate one TClonesArray for all clusters |
44adbd4b | 1244 | if(fBClonesArray && !fOutputClonesArray) fOutputClonesArray = new TClonesArray("AliTPCclusterMI",1000); |
98ee6d31 | 1245 | // reset counter |
1246 | fNclusters = 0; | |
88cb7938 | 1247 | |
daac2a58 | 1248 | fMaxTime = fRecoParam->GetLastBin() + 6; // add 3 virtual time bins before and 3 after |
f8aae377 | 1249 | const Int_t kNIS = fParam->GetNInnerSector(); |
1250 | const Int_t kNOS = fParam->GetNOuterSector(); | |
1251 | const Int_t kNS = kNIS + kNOS; | |
1252 | fZWidth = fParam->GetZWidth(); | |
1253 | Int_t zeroSup = fParam->GetZeroSup(); | |
adefcaa6 | 1254 | // |
e7034a8b | 1255 | // Clean-up |
adefcaa6 | 1256 | // |
e7034a8b | 1257 | |
1258 | AliTPCROC * roc = AliTPCROC::Instance(); | |
adefcaa6 | 1259 | Int_t nRowsMax = roc->GetNRows(roc->GetNSector()-1); |
1260 | Int_t nPadsMax = roc->GetNPads(roc->GetNSector()-1,nRowsMax-1); | |
adefcaa6 | 1261 | for (Int_t iRow = 0; iRow < nRowsMax; iRow++) { |
1262 | // | |
1263 | Int_t maxBin = fMaxTime*(nPadsMax+6); // add 3 virtual pads before and 3 after | |
e7034a8b | 1264 | memset(fAllBins[iRow],0,sizeof(Float_t)*maxBin); |
1265 | fAllNSigBins[iRow]=0; | |
adefcaa6 | 1266 | } |
1267 | // | |
22c352f8 | 1268 | // Loop over sectors |
adefcaa6 | 1269 | // |
22c352f8 | 1270 | for(fSector = 0; fSector < kNS; fSector++) { |
f8aae377 | 1271 | |
22c352f8 | 1272 | Int_t nRows = 0; |
1273 | Int_t nDDLs = 0, indexDDL = 0; | |
1274 | if (fSector < kNIS) { | |
1275 | nRows = fParam->GetNRowLow(); | |
1276 | fSign = (fSector < kNIS/2) ? 1 : -1; | |
1277 | nDDLs = 2; | |
1278 | indexDDL = fSector * 2; | |
1279 | } | |
1280 | else { | |
1281 | nRows = fParam->GetNRowUp(); | |
1282 | fSign = ((fSector-kNIS) < kNOS/2) ? 1 : -1; | |
1283 | nDDLs = 4; | |
1284 | indexDDL = (fSector-kNIS) * 4 + kNIS * 2; | |
1285 | } | |
1286 | ||
98ee6d31 | 1287 | // load the raw data for corresponding DDLs |
1288 | rawReader->Reset(); | |
1289 | rawReader->Select("TPC",indexDDL,indexDDL+nDDLs-1); | |
1290 | ||
1291 | // select only good sector | |
35e039dc | 1292 | if (!input.Next()) continue; |
98ee6d31 | 1293 | if(input.GetSector() != fSector) continue; |
1294 | ||
1295 | AliTPCCalROC * gainROC = gainTPC->GetCalROC(fSector); // pad gains per given sector | |
98ee6d31 | 1296 | |
22c352f8 | 1297 | for (Int_t iRow = 0; iRow < nRows; iRow++) { |
1298 | Int_t maxPad; | |
1299 | if (fSector < kNIS) | |
7c9528d8 | 1300 | maxPad = fParam->GetNPadsLow(iRow); |
22c352f8 | 1301 | else |
7c9528d8 | 1302 | maxPad = fParam->GetNPadsUp(iRow); |
22c352f8 | 1303 | |
1304 | Int_t maxBin = fMaxTime*(maxPad+6); // add 3 virtual pads before and 3 after | |
e7034a8b | 1305 | memset(fAllBins[iRow],0,sizeof(Float_t)*maxBin); |
1306 | fAllNSigBins[iRow] = 0; | |
22c352f8 | 1307 | } |
1308 | ||
adefcaa6 | 1309 | Int_t digCounter=0; |
22c352f8 | 1310 | // Begin loop over altro data |
adefcaa6 | 1311 | Bool_t calcPedestal = fRecoParam->GetCalcPedestal(); |
1312 | Float_t gain =1; | |
1313 | Int_t lastPad=-1; | |
98ee6d31 | 1314 | |
1315 | input.Reset(); | |
22c352f8 | 1316 | while (input.Next()) { |
22c352f8 | 1317 | if (input.GetSector() != fSector) |
7c9528d8 | 1318 | AliFatal(Form("Sector index mismatch ! Expected (%d), but got (%d) !",fSector,input.GetSector())); |
1319 | ||
22c352f8 | 1320 | |
22c352f8 | 1321 | Int_t iRow = input.GetRow(); |
9546a7ff | 1322 | if (iRow < 0){ |
7c9528d8 | 1323 | continue; |
9546a7ff | 1324 | } |
1325 | ||
3f0af4ba | 1326 | if (iRow < 0 || iRow >= nRows){ |
7c9528d8 | 1327 | AliError(Form("Pad-row index (%d) outside the range (%d -> %d) !", |
22c352f8 | 1328 | iRow, 0, nRows -1)); |
7c9528d8 | 1329 | continue; |
3f0af4ba | 1330 | } |
adefcaa6 | 1331 | //pad |
1332 | Int_t iPad = input.GetPad(); | |
3f0af4ba | 1333 | if (iPad < 0 || iPad >= nPadsMax) { |
7c9528d8 | 1334 | AliError(Form("Pad index (%d) outside the range (%d -> %d) !", |
adefcaa6 | 1335 | iPad, 0, nPadsMax-1)); |
7c9528d8 | 1336 | continue; |
3f0af4ba | 1337 | } |
adefcaa6 | 1338 | if (iPad!=lastPad){ |
7c9528d8 | 1339 | gain = gainROC->GetValue(iRow,iPad); |
1340 | lastPad = iPad; | |
adefcaa6 | 1341 | } |
1342 | iPad+=3; | |
1343 | //time | |
1344 | Int_t iTimeBin = input.GetTime(); | |
daac2a58 | 1345 | if ( iTimeBin < fRecoParam->GetFirstBin() || iTimeBin >= fRecoParam->GetLastBin()){ |
7c9528d8 | 1346 | continue; |
1347 | AliFatal(Form("Timebin index (%d) outside the range (%d -> %d) !", | |
adefcaa6 | 1348 | iTimeBin, 0, iTimeBin -1)); |
daac2a58 | 1349 | } |
adefcaa6 | 1350 | iTimeBin+=3; |
3f0af4ba | 1351 | |
adefcaa6 | 1352 | //signal |
22c352f8 | 1353 | Float_t signal = input.GetSignal(); |
7c9528d8 | 1354 | if (!calcPedestal && signal <= zeroSup) continue; |
9546a7ff | 1355 | |
940ed1f0 | 1356 | if (!calcPedestal) { |
7c9528d8 | 1357 | Int_t bin = iPad*fMaxTime+iTimeBin; |
1358 | if (gain>0){ | |
e7034a8b | 1359 | fAllBins[iRow][bin] = signal/gain; |
7c9528d8 | 1360 | }else{ |
e7034a8b | 1361 | fAllBins[iRow][bin] =0; |
7c9528d8 | 1362 | } |
e7034a8b | 1363 | fAllSigBins[iRow][fAllNSigBins[iRow]++] = bin; |
940ed1f0 | 1364 | }else{ |
e7034a8b | 1365 | fAllBins[iRow][iPad*fMaxTime+iTimeBin] = signal; |
940ed1f0 | 1366 | } |
e7034a8b | 1367 | fAllBins[iRow][iPad*fMaxTime+0]+=1.; // pad with signal |
3f0af4ba | 1368 | |
1369 | // Temporary | |
1370 | digCounter++; | |
22c352f8 | 1371 | } // End of the loop over altro data |
adefcaa6 | 1372 | // |
1373 | // | |
aba7fdfc | 1374 | // |
1375 | // | |
22c352f8 | 1376 | // Now loop over rows and perform pedestal subtraction |
adefcaa6 | 1377 | if (digCounter==0) continue; |
e7034a8b | 1378 | ProcessSectorData(); |
22c352f8 | 1379 | } // End of loop over sectors |
98ee6d31 | 1380 | |
9546a7ff | 1381 | if (rawReader->GetEventId() && fOutput ){ |
98ee6d31 | 1382 | Info("Digits2Clusters", "File %s Event\t%d\tNumber of found clusters : %d\n", fOutput->GetName(),*(rawReader->GetEventId()), fNclusters); |
9546a7ff | 1383 | } |
ebe95b38 | 1384 | |
db3576a7 | 1385 | if(rawReader->GetEventId()) { |
98ee6d31 | 1386 | Info("Digits2Clusters", "Event\t%d\tNumber of found clusters : %d\n",*(rawReader->GetEventId()), fNclusters); |
1387 | } | |
1388 | ||
1389 | if(fBClonesArray) { | |
1390 | //Info("Digits2Clusters", "Number of found clusters : %d\n",fOutputClonesArray->GetEntriesFast()); | |
db3576a7 | 1391 | } |
f8aae377 | 1392 | } |
1393 | ||
940ed1f0 | 1394 | void AliTPCclustererMI::FindClusters(AliTPCCalROC * noiseROC) |
f8aae377 | 1395 | { |
940ed1f0 | 1396 | |
1397 | // | |
1398 | // add virtual charge at the edge | |
1399 | // | |
7041b196 | 1400 | Double_t kMaxDumpSize = 500000; |
ebe95b38 | 1401 | if (!fOutput) { |
1402 | fBDumpSignal =kFALSE; | |
1403 | }else{ | |
1404 | if (fRecoParam->GetCalcPedestal() && fOutput->GetZipBytes()< kMaxDumpSize) fBDumpSignal =kTRUE; //dump signal flag | |
1405 | } | |
1406 | ||
f8aae377 | 1407 | fNcluster=0; |
f8aae377 | 1408 | fLoop=1; |
a1ec4d07 | 1409 | Int_t crtime = Int_t((fParam->GetZLength(fSector)-fRecoParam->GetCtgRange()*fRx)/fZWidth-fParam->GetNTBinsL1()-5); |
940ed1f0 | 1410 | Float_t minMaxCutAbs = fRecoParam->GetMinMaxCutAbs(); |
1411 | Float_t minLeftRightCutAbs = fRecoParam->GetMinLeftRightCutAbs(); | |
1412 | Float_t minUpDownCutAbs = fRecoParam->GetMinUpDownCutAbs(); | |
1413 | Float_t minMaxCutSigma = fRecoParam->GetMinMaxCutSigma(); | |
1414 | Float_t minLeftRightCutSigma = fRecoParam->GetMinLeftRightCutSigma(); | |
1415 | Float_t minUpDownCutSigma = fRecoParam->GetMinUpDownCutSigma(); | |
f47588e0 | 1416 | Int_t useOnePadCluster = fRecoParam->GetUseOnePadCluster(); |
5b33a7f5 | 1417 | for (Int_t iSig = 0; iSig < fNSigBins; iSig++) { |
1418 | Int_t i = fSigBins[iSig]; | |
1bfaa9e9 | 1419 | if (i%fMaxTime<=crtime) continue; |
5b33a7f5 | 1420 | Float_t *b = &fBins[i]; |
940ed1f0 | 1421 | //absolute custs |
03fe1804 | 1422 | if (b[0]<minMaxCutAbs) continue; //threshold for maxima |
1423 | // | |
f47588e0 | 1424 | if (useOnePadCluster==0){ |
1425 | if (b[-1]+b[1]+b[-fMaxTime]+b[fMaxTime]<=0) continue; // cut on isolated clusters | |
1426 | if (b[-1]+b[1]<=0) continue; // cut on isolated clusters | |
1427 | if (b[-fMaxTime]+b[fMaxTime]<=0) continue; // cut on isolated clusters | |
1428 | } | |
03fe1804 | 1429 | // |
1430 | if ((b[0]+b[-1]+b[1])<minUpDownCutAbs) continue; //threshold for up down (TRF) | |
940ed1f0 | 1431 | if ((b[0]+b[-fMaxTime]+b[fMaxTime])<minLeftRightCutAbs) continue; //threshold for left right (PRF) |
f8aae377 | 1432 | if (!IsMaximum(*b,fMaxTime,b)) continue; |
940ed1f0 | 1433 | // |
1434 | Float_t noise = noiseROC->GetValue(fRow, i/fMaxTime); | |
b24bd339 | 1435 | if (noise>fRecoParam->GetMaxNoise()) continue; |
940ed1f0 | 1436 | // sigma cuts |
1437 | if (b[0]<minMaxCutSigma*noise) continue; //threshold form maxima | |
1438 | if ((b[0]+b[-1]+b[1])<minUpDownCutSigma*noise) continue; //threshold for up town TRF | |
1439 | if ((b[0]+b[-fMaxTime]+b[fMaxTime])<minLeftRightCutSigma*noise) continue; //threshold for left right (PRF) | |
1440 | ||
d101caf3 | 1441 | AliTPCclusterMI c; // default cosntruction without info |
f8aae377 | 1442 | Int_t dummy=0; |
1443 | MakeCluster(i, fMaxTime, fBins, dummy,c); | |
940ed1f0 | 1444 | |
f8aae377 | 1445 | //} |
1446 | } | |
8569a2b0 | 1447 | } |
65c045f0 | 1448 | |
eea36fac | 1449 | Bool_t AliTPCclustererMI::AcceptCluster(AliTPCclusterMI *cl){ |
1450 | // | |
679026e6 | 1451 | // Currently hack to filter digital noise (15.06.2008) |
eea36fac | 1452 | // To be parameterized in the AliTPCrecoParam |
1453 | // More inteligent way to be used in future | |
679026e6 | 1454 | // Acces to the proper pedestal file needed |
eea36fac | 1455 | // |
1456 | if (cl->GetMax()<400) return kTRUE; | |
1457 | Double_t ratio = cl->GetQ()/cl->GetMax(); | |
679026e6 | 1458 | if (cl->GetMax()>700){ |
1459 | if ((ratio - int(ratio)>0.8)) return kFALSE; | |
1460 | } | |
eea36fac | 1461 | if ((ratio - int(ratio)<0.95)) return kTRUE; |
1462 | return kFALSE; | |
eea36fac | 1463 | } |
1464 | ||
65c045f0 | 1465 | |
940ed1f0 | 1466 | Double_t AliTPCclustererMI::ProcesSignal(Float_t *signal, Int_t nchannels, Int_t id[3], Double_t &rmsEvent, Double_t &pedestalEvent){ |
65c045f0 | 1467 | // |
1468 | // process signal on given pad - + streaming of additional information in special mode | |
1469 | // | |
1470 | // id[0] - sector | |
1471 | // id[1] - row | |
adefcaa6 | 1472 | // id[2] - pad |
1473 | ||
1474 | // | |
1475 | // ESTIMATE pedestal and the noise | |
1476 | // | |
adefcaa6 | 1477 | const Int_t kPedMax = 100; |
1478 | Float_t max = 0; | |
1479 | Float_t maxPos = 0; | |
1480 | Int_t median = -1; | |
1481 | Int_t count0 = 0; | |
1482 | Int_t count1 = 0; | |
940ed1f0 | 1483 | Float_t rmsCalib = rmsEvent; // backup initial value ( from calib) |
1484 | Float_t pedestalCalib = pedestalEvent;// backup initial value ( from calib) | |
b7a563f9 | 1485 | Int_t firstBin = fRecoParam->GetFirstBin(); |
65c045f0 | 1486 | // |
adefcaa6 | 1487 | UShort_t histo[kPedMax]; |
f174362f | 1488 | //memset(histo,0,kPedMax*sizeof(UShort_t)); |
b842afde | 1489 | for (Int_t i=0; i<kPedMax; i++) histo[i]=0; |
adefcaa6 | 1490 | for (Int_t i=0; i<fMaxTime; i++){ |
1491 | if (signal[i]<=0) continue; | |
940ed1f0 | 1492 | if (signal[i]>max && i>firstBin) { |
65c045f0 | 1493 | max = signal[i]; |
1494 | maxPos = i; | |
adefcaa6 | 1495 | } |
1496 | if (signal[i]>kPedMax-1) continue; | |
1497 | histo[int(signal[i]+0.5)]++; | |
1498 | count0++; | |
65c045f0 | 1499 | } |
7fef31a6 | 1500 | // |
adefcaa6 | 1501 | for (Int_t i=1; i<kPedMax; i++){ |
1502 | if (count1<count0*0.5) median=i; | |
1503 | count1+=histo[i]; | |
1504 | } | |
1505 | // truncated mean | |
65c045f0 | 1506 | // |
7041b196 | 1507 | Float_t count10=histo[median] ,mean=histo[median]*median, rms=histo[median]*median*median ; |
1508 | Float_t count06=histo[median] ,mean06=histo[median]*median, rms06=histo[median]*median*median ; | |
1509 | Float_t count09=histo[median] ,mean09=histo[median]*median, rms09=histo[median]*median*median ; | |
adefcaa6 | 1510 | // |
1511 | for (Int_t idelta=1; idelta<10; idelta++){ | |
1512 | if (median-idelta<=0) continue; | |
1513 | if (median+idelta>kPedMax) continue; | |
1514 | if (count06<0.6*count1){ | |
1515 | count06+=histo[median-idelta]; | |
1516 | mean06 +=histo[median-idelta]*(median-idelta); | |
1517 | rms06 +=histo[median-idelta]*(median-idelta)*(median-idelta); | |
1518 | count06+=histo[median+idelta]; | |
1519 | mean06 +=histo[median+idelta]*(median+idelta); | |
1520 | rms06 +=histo[median+idelta]*(median+idelta)*(median+idelta); | |
1521 | } | |
1522 | if (count09<0.9*count1){ | |
1523 | count09+=histo[median-idelta]; | |
1524 | mean09 +=histo[median-idelta]*(median-idelta); | |
1525 | rms09 +=histo[median-idelta]*(median-idelta)*(median-idelta); | |
1526 | count09+=histo[median+idelta]; | |
1527 | mean09 +=histo[median+idelta]*(median+idelta); | |
1528 | rms09 +=histo[median+idelta]*(median+idelta)*(median+idelta); | |
65c045f0 | 1529 | } |
adefcaa6 | 1530 | if (count10<0.95*count1){ |
1531 | count10+=histo[median-idelta]; | |
1532 | mean +=histo[median-idelta]*(median-idelta); | |
1533 | rms +=histo[median-idelta]*(median-idelta)*(median-idelta); | |
1534 | count10+=histo[median+idelta]; | |
1535 | mean +=histo[median+idelta]*(median+idelta); | |
1536 | rms +=histo[median+idelta]*(median+idelta)*(median+idelta); | |
1537 | } | |
1538 | } | |
3f0af4ba | 1539 | if (count10) { |
1540 | mean /=count10; | |
1541 | rms = TMath::Sqrt(TMath::Abs(rms/count10-mean*mean)); | |
1542 | } | |
1543 | if (count06) { | |
1544 | mean06/=count06; | |
1545 | rms06 = TMath::Sqrt(TMath::Abs(rms06/count06-mean06*mean06)); | |
1546 | } | |
1547 | if (count09) { | |
1548 | mean09/=count09; | |
1549 | rms09 = TMath::Sqrt(TMath::Abs(rms09/count09-mean09*mean09)); | |
1550 | } | |
940ed1f0 | 1551 | rmsEvent = rms09; |
adefcaa6 | 1552 | // |
940ed1f0 | 1553 | pedestalEvent = median; |
adefcaa6 | 1554 | if (AliLog::GetDebugLevel("","AliTPCclustererMI")==0) return median; |
1555 | // | |
1556 | UInt_t uid[3] = {UInt_t(id[0]),UInt_t(id[1]),UInt_t(id[2])}; | |
1557 | // | |
1558 | // Dump mean signal info | |
1559 | // | |
b2426624 | 1560 | if (AliTPCReconstructor::StreamLevel()>0) { |
1561 | (*fDebugStreamer)<<"Signal"<< | |
ef4ad662 | 1562 | "TimeStamp="<<fTimeStamp<< |
1563 | "EventType="<<fEventType<< | |
adefcaa6 | 1564 | "Sector="<<uid[0]<< |
1565 | "Row="<<uid[1]<< | |
1566 | "Pad="<<uid[2]<< | |
1567 | "Max="<<max<< | |
1568 | "MaxPos="<<maxPos<< | |
1569 | // | |
1570 | "Median="<<median<< | |
1571 | "Mean="<<mean<< | |
1572 | "RMS="<<rms<< | |
1573 | "Mean06="<<mean06<< | |
1574 | "RMS06="<<rms06<< | |
1575 | "Mean09="<<mean09<< | |
1576 | "RMS09="<<rms09<< | |
940ed1f0 | 1577 | "RMSCalib="<<rmsCalib<< |
1578 | "PedCalib="<<pedestalCalib<< | |
adefcaa6 | 1579 | "\n"; |
b2426624 | 1580 | } |
adefcaa6 | 1581 | // |
1582 | // fill pedestal histogram | |
1583 | // | |
65c045f0 | 1584 | // |
adefcaa6 | 1585 | // |
1586 | // | |
1587 | Float_t kMin =fRecoParam->GetDumpAmplitudeMin(); // minimal signal to be dumped | |
1588 | Float_t *dsignal = new Float_t[nchannels]; | |
1589 | Float_t *dtime = new Float_t[nchannels]; | |
1590 | for (Int_t i=0; i<nchannels; i++){ | |
1591 | dtime[i] = i; | |
1592 | dsignal[i] = signal[i]; | |
1593 | } | |
03fe1804 | 1594 | |
7fef31a6 | 1595 | // |
a525cc34 | 1596 | // Big signals dumping |
1597 | // | |
b2426624 | 1598 | if (AliTPCReconstructor::StreamLevel()>0) { |
b7a563f9 | 1599 | if (max-median>kMin &&maxPos>fRecoParam->GetFirstBin()) |
a525cc34 | 1600 | (*fDebugStreamer)<<"SignalB"<< // pads with signal |
1601 | "TimeStamp="<<fTimeStamp<< | |
1602 | "EventType="<<fEventType<< | |
1603 | "Sector="<<uid[0]<< | |
1604 | "Row="<<uid[1]<< | |
1605 | "Pad="<<uid[2]<< | |
35e039dc | 1606 | // "Graph="<<graph<< |
a525cc34 | 1607 | "Max="<<max<< |
1608 | "MaxPos="<<maxPos<< | |
1609 | // | |
1610 | "Median="<<median<< | |
1611 | "Mean="<<mean<< | |
1612 | "RMS="<<rms<< | |
1613 | "Mean06="<<mean06<< | |
1614 | "RMS06="<<rms06<< | |
1615 | "Mean09="<<mean09<< | |
1616 | "RMS09="<<rms09<< | |
1617 | "\n"; | |
b2426624 | 1618 | } |
7fef31a6 | 1619 | |
65c045f0 | 1620 | delete [] dsignal; |
1621 | delete [] dtime; | |
940ed1f0 | 1622 | if (rms06>fRecoParam->GetMaxNoise()) { |
1623 | pedestalEvent+=1024.; | |
1624 | return 1024+median; // sign noisy channel in debug mode | |
1625 | } | |
65c045f0 | 1626 | return median; |
1627 | } | |
1628 | ||
53a11d77 | 1629 | Int_t AliTPCclustererMI::ReadHLTClusters() |
1630 | { | |
1631 | // | |
1632 | // read HLT clusters instead of off line custers, | |
1633 | // used in Digits2Clusters | |
1634 | // | |
1635 | ||
1636 | TObject* pClusterAccess=NULL; | |
1637 | TClass* pCl=NULL; | |
1638 | ROOT::NewFunc_t pNewFunc=NULL; | |
1639 | do { | |
1640 | pCl=TClass::GetClass("AliHLTTPCClusterAccessHLTOUT"); | |
1641 | } while (!pCl && gSystem->Load("libAliHLTTPC.so")==0); | |
1642 | if (!pCl || (pNewFunc=pCl->GetNew())==NULL) { | |
1643 | AliError("can not load class description of AliHLTTPCClusterAccessHLTOUT, aborting ..."); | |
1644 | return -1; | |
1645 | } | |
1646 | ||
1647 | void* p=(*pNewFunc)(NULL); | |
1648 | if (!p) { | |
1649 | AliError("unable to create instance of AliHLTTPCClusterAccessHLTOUT"); | |
1650 | return -2; | |
1651 | } | |
1652 | pClusterAccess=reinterpret_cast<TObject*>(p); | |
1653 | if (!pClusterAccess) { | |
1654 | AliError("instance not of type TObject"); | |
1655 | return -3 ; | |
1656 | } | |
1657 | ||
1658 | const Int_t kNIS = fParam->GetNInnerSector(); | |
1659 | const Int_t kNOS = fParam->GetNOuterSector(); | |
1660 | const Int_t kNS = kNIS + kNOS; | |
1661 | fNclusters = 0; | |
1662 | ||
1663 | for(fSector = 0; fSector < kNS; fSector++) { | |
1664 | ||
bbdbe223 | 1665 | Int_t iResult = 1; |
53a11d77 | 1666 | TString param("sector="); param+=fSector; |
1667 | pClusterAccess->Clear(); | |
bbdbe223 | 1668 | pClusterAccess->Execute("read", param, &iResult); |
1669 | if (iResult < 0) { | |
1670 | return iResult; | |
1671 | AliError("HLT Clusters can not be found"); | |
1672 | } | |
1673 | ||
53a11d77 | 1674 | if (pClusterAccess->FindObject("clusterarray")==NULL) { |
1675 | AliError("HLT clusters requested, but not cluster array not present"); | |
1676 | return -4; | |
1677 | } | |
1678 | ||
1679 | TClonesArray* clusterArray=dynamic_cast<TClonesArray*>(pClusterAccess->FindObject("clusterarray")); | |
1680 | if (!clusterArray) { | |
1681 | AliError("HLT cluster array is not of class type TClonesArray"); | |
1682 | return -5; | |
1683 | } | |
1684 | ||
1685 | AliDebug(4,Form("Reading %d clusters from HLT for sector %d", clusterArray->GetEntriesFast(), fSector)); | |
65c045f0 | 1686 | |
53a11d77 | 1687 | Int_t nClusterSector=0; |
1688 | Int_t nRows=fParam->GetNRow(fSector); | |
65c045f0 | 1689 | |
53a11d77 | 1690 | for (fRow = 0; fRow < nRows; fRow++) { |
1691 | fRowCl->SetID(fParam->GetIndex(fSector, fRow)); | |
1692 | if (fOutput) fOutput->GetBranch("Segment")->SetAddress(&fRowCl); | |
1693 | fNcluster=0; // reset clusters per row | |
1694 | ||
1695 | fRx = fParam->GetPadRowRadii(fSector, fRow); | |
1696 | fPadLength = fParam->GetPadPitchLength(fSector, fRow); | |
1697 | fPadWidth = fParam->GetPadPitchWidth(); | |
1698 | fMaxPad = fParam->GetNPads(fSector,fRow); | |
1699 | fMaxBin = fMaxTime*(fMaxPad+6); // add 3 virtual pads before and 3 after | |
1700 | ||
1701 | fBins = fAllBins[fRow]; | |
1702 | fSigBins = fAllSigBins[fRow]; | |
1703 | fNSigBins = fAllNSigBins[fRow]; | |
1704 | ||
1705 | for (Int_t i=0; i<clusterArray->GetEntriesFast(); i++) { | |
1706 | if (!clusterArray->At(i)) | |
1707 | continue; | |
1708 | ||
1709 | AliTPCclusterMI* cluster=dynamic_cast<AliTPCclusterMI*>(clusterArray->At(i)); | |
1710 | if (!cluster) continue; | |
1711 | if (cluster->GetRow()!=fRow) continue; | |
1712 | nClusterSector++; | |
1713 | AddCluster(*cluster, NULL, 0); | |
1714 | } | |
1715 | ||
1716 | FillRow(); | |
1717 | fRowCl->GetArray()->Clear("c"); | |
1718 | ||
1719 | } // for (fRow = 0; fRow < nRows; fRow++) { | |
1720 | if (nClusterSector!=clusterArray->GetEntriesFast()) { | |
1721 | AliError(Form("Failed to read %d out of %d HLT clusters", | |
1722 | clusterArray->GetEntriesFast()-nClusterSector, | |
1723 | clusterArray->GetEntriesFast())); | |
1724 | } | |
1725 | fNclusters+=nClusterSector; | |
1726 | } // for(fSector = 0; fSector < kNS; fSector++) { | |
03fe1804 | 1727 | |
53a11d77 | 1728 | delete pClusterAccess; |
03fe1804 | 1729 | |
53a11d77 | 1730 | Info("Digits2Clusters", "Number of converted HLT clusters : %d", fNclusters); |
1731 | ||
1732 | return 0; | |
1733 | } |