[u/mrichter/AliRoot.git] / TRD / AliTRDqaRecPoints.cxx

/**************************************************************************
 * Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. *
 *                                                                        *
 * Author: The ALICE Off-line Project.                                    *
 * Contributors are mentioned in the code where appropriate.              *
 *                                                                        *
 * Permission to use, copy, modify and distribute this software and its   *
 * documentation strictly for non-commercial purposes is hereby granted   *
 * without fee, provided that the above copyright notice appears in all   *
 * copies and that both the copyright notice and this permission notice   *
 * appear in the supporting documentation. The authors make no claims     *
 * about the suitability of this software for any purpose. It is          *
 * provided "as is" without express or implied warranty.                  *
 **************************************************************************/

/* $Id: AliTRDqaRecPoints.cxx 23387 2008-01-17 17:25:16Z cblume $ */

////////////////////////////////////////////////////////////////////////////
//                                                                        //
//  Produces the data needed to calculate the quality assurance.          //
//  All data must be mergeable objects.                                   //
//                                                                        //
//  Author:                                                               //
//    Sylwester Radomski (radomski@physi.uni-heidelberg.de)               //
//                                                                        //
////////////////////////////////////////////////////////////////////////////

// --- ROOT system ---
#include <TClonesArray.h>
#include <TFile.h> 
#include <TH1D.h> 
#include <TH2D.h>
#include <TH3D.h>
#include <TProfile.h>
#include <TF1.h>
#include <TCanvas.h>

// --- AliRoot header files ---
#include "AliESDEvent.h"
#include "AliLog.h"
#include "AliTRDcluster.h"
#include "AliTRDqaRecPoints.h"
#include "AliTRDgeometry.h"
#include "AliTRDdataArrayI.h"

#include "AliQAChecker.h"

ClassImp(AliTRDqaRecPoints)

//____________________________________________________________________________ 

AliTRDqaRecPoints::AliTRDqaRecPoints() : 
  TObject(),
  fnEvents(0),
  fHist(0),
  fnPad(0),
  fRef(0)
{
  //
  // Default constructor
  //

}

//____________________________________________________________________________ 

AliTRDqaRecPoints::AliTRDqaRecPoints(const AliTRDqaRecPoints &/*qa*/) : 
  TObject(),
  fnEvents(0),
  fHist(0),
  fnPad(0),
  fRef(0)
{
  //
  // Copy constructor
  //

}

//____________________________________________________________________________ 
void AliTRDqaRecPoints::Process(const char* filename)
{
  //
  // Detector specific actions at end of cycle
  //
  //TStopwatch watch;
  //watch.Start();
  
  AliInfo("End of TRD cycle");
  
  //if (task == AliQA::kRECPOINTS) {
  
  TH1D *hist = new TH1D("fitHist", "", 200, -0.5, 199.5);
  //fHist->Print();
  
  // fill detector map;
  for(int i=0; i<540; i++) {
    Double_t v = ((TH1D*)fHist->At(0))->GetBinContent(i+1);
    Int_t sm = i/30;
    Int_t det = i%30;
    
    TH2D *detMap = (TH2D*)fHist->At(87);
    Int_t bin = detMap->FindBin(sm, det);
    detMap->SetBinContent(bin, v);
  }
  
  
  // Rec points full chambers
  for (Int_t i=0; i<540; i++) {
    
    //AliInfo(Form("I = %d", i));
    
    //TH1D *h = ((TH2D*)fHist->At(1))->ProjectionY(Form("qaTRD_recPoints_amp_%d",i), i+1, i+1);
    hist->Reset();
    for(Int_t b=1; b<hist->GetXaxis()->GetNbins()-1; b++) {
      Double_t xvalue = hist->GetBinCenter(b);
      Int_t bin = ((TH2D*)fHist->At(1))->FindBin(i,xvalue);
      Double_t value =  ((TH2D*)fHist->At(1))->GetBinContent(bin);
      hist->SetBinContent(b, value);
    }
    
    //printf("Sum = %d %f\n", i, hist->GetSum());
    if (hist->GetSum() < 100) continue; // chamber not present
    
    hist->Fit("landau", "q0", "goff", 10, 180);
    TF1 *fit = hist->GetFunction("landau");
    ((TH1D*)fHist->At(12))->Fill(fit->GetParameter(1));
    ((TH1D*)fHist->At(13))->Fill(fit->GetParameter(2));
  }
  
  // time-bin by time-bin sm by sm
  for(Int_t i=0; i<18; i++) { // loop over super-modules
    
    for(Int_t j=0; j<35; j++) { // loop over time bins
      
      //TH1D *h =  ((TH3D*)fHist->At(10))->ProjectionZ(Form("ampTime_%d",i), i+1, i+1, j+1, j+1);     
      hist->Reset();
      for(Int_t b=1; b<hist->GetXaxis()->GetNbins()-1; b++) {
	Double_t xvalue = hist->GetBinCenter(b);
	Double_t svalue = 0;
	
	for(Int_t det=i*30; det<(i+1)*30; det++) { // loop over detectors
	  Int_t bin = ((TH3D*)fHist->At(10))->FindBin(det,j,xvalue);
	  Double_t value =  ((TH3D*)fHist->At(10))->GetBinContent(bin);
	  svalue += value;
	}
	//printf("v = %f\n", value);
	hist->SetBinContent(b, svalue);
      }
      
      if (hist->GetSum() < 100) continue;
      //printf("fitting %d %d %f\n", i, j, hist->GetSum());
      
      hist->Fit("landau", "q0", "goff", 10, 180);
      TF1 *fit = hist->GetFunction("landau");
      
      TH1D *h1 = (TH1D*)fHist->At(14+18+i);
      Int_t bin = h1->FindBin(j);
      // printf("%d %d %d\n", det, j, bin);
      h1->SetBinContent(bin, TMath::Abs(fit->GetParameter(1)));
    }
  }
  

  // time-bin by time-bin chamber by chamber

  for (Int_t i=0; i<540; i++) {
    
    //TH1D *test = ((TH3D*)fHist->At(10))->ProjectionZ(Form("ampTime_%d",i), i+1, i+1, 0, 35);     
    //if (test->GetSum() < 100) continue;
    
    //AliInfo(Form("fitting det = %d", i));
    
    for(Int_t j=0; j<35; j++) {
      
      //TH1D *h =  ((TH3D*)fHist->At(10))->ProjectionZ(Form("ampTime_%d",i), i+1, i+1, j+1, j+1);     
      hist->Reset();
      for(Int_t b=1; b<hist->GetXaxis()->GetNbins()-1; b++) {
	Double_t xvalue = hist->GetBinCenter(b);
	Int_t bin = ((TH3D*)fHist->At(10))->FindBin(i,j,xvalue);
	Double_t value =  ((TH3D*)fHist->At(10))->GetBinContent(bin);
	//printf("v = %f\n", value);
	hist->SetBinContent(b, value);
      }
      
      if (hist->GetSum() < 100) continue;
      //printf("fitting %d %d %f\n", i, j, hist->GetSum());
      
      hist->Fit("landau", "q0", "goff", 10, 180);
      TF1 *fit = hist->GetFunction("landau");
      
      Int_t sm = i/30;
      Int_t det = i%30;
      TH2D *h2 = (TH2D*)fHist->At(14+sm);
      Int_t bin = h2->FindBin(det,j);
      // printf("%d %d %d\n", det, j, bin);
      h2->SetBinContent(bin, TMath::Abs(fit->GetParameter(1)));
      h2->SetBinError(bin,fit->GetParError(1));
    }
  }
    
  if (hist) delete hist;
    
  
  TFile *outFile = new TFile(filename, "RECREATE");
  outFile->mkdir("TRD");
  gDirectory->cd("TRD");
  gDirectory->mkdir("RecPoints");
  gDirectory->cd("RecPoints");
  fHist->Write();

  if (fRef) {
    for(Int_t i=0; i<540; i++) {
      //fRefHist[i]->Scale(1./fnEvents);
      fRefHist[i]->Write();
    }
  }

  outFile->Close();

}

//____________________________________________________________________________ 

void AliTRDqaRecPoints::Init()
{
  //
  // Create Reconstructed Points histograms in RecPoints subdir
  //

  //const Int_t kNhist = 14 + 4 * 18 + 2;
  const Int_t kNhist = 88+2*18+1;
  TH1 *hist[kNhist];

  hist[0] = new TH1D("qaTRD_recPoints_det", ";Detector ID of the cluster", 540, -0.5, 539.5);
  hist[1] = new TH2D("qaTRD_recPoints_amp", ";Amplitude", 540, -0.5, 539, 200, -0.5, 199.5);
  hist[2] = new TH1D("qaTRD_recPoints_npad", ";Number of Pads", 12, -0.5, 11.5);

  hist[3] = new TH1D("qaTRD_recPoints_dist2", ";residuals [2pad]", 100, -1, 1);
  hist[4] = new TH1D("qaTRD_recPoints_dist3", ";residuals [3pad]", 100, -1, 1);
  hist[5] = new TH1D("qaTRD_recPoints_dist4", ";residuals [4pad]", 100, -1, 1);
  hist[6] = new TH1D("qaTRD_recPoints_dist5", ";residuals [5pad]", 100, -1, 1);

  hist[7] = new TH2D("qaTRD_recPoints_rowCol", ";row;col", 16, -0.5, 15.5, 145, -0.5, 144.5);
  hist[8] = new TH1D("qaTRD_recPoints_time", ";time bin", 35, -0.5, 34.5);
  hist[9] = new TH1D("qaTRD_recPoints_nCls", ";number of clusters", 500, -0.5, 499.5);

  hist[10] = new TH3D("qaTRD_recPoints_sigTime", ";chamber;time bin;signal", 
		      540, -0.5, 539.5, 35, -0.5, 34.5, 200, -0.5, 199.5);
  hist[11] = new TProfile("qaTRD_recPoints_prf", ";distance;center of gravity"
                         , 120, -0.6, 0.6, -1.2, 1.2, "");

  hist[12] = new TH1D("qaTRD_recPoints_ampMPV", ";amplitude MPV", 150, 0, 150);
  hist[13] = new TH1D("qaTRD_recPoints_ampSigma", ";amplitude Sigma", 200, 0, 200); 
  
  // chamber by chamber
  for(Int_t i=0; i<18; i++) {
    hist[14+i] = new TH2D(Form("qaTRD_recPoints_sigTime_sm%d",i), Form("sm%d;det;time bin"), 
			30, -0.5, 29.5, 35, -0.5, 34.5);
    hist[14+i]->SetMinimum(20);
    hist[14+i]->SetMaximum(40);
  }
 
  // time bin by time bin sm-by-sm
  for(Int_t i=0; i<18; i++) {
    hist[14+18+i] = new TH1D(Form("qaTRD_recPoints_sigTimeShape_sm%d", i), 
			     Form("sm%d;time bin;signal"),
			     35, -0.5, 34.5);

    hist[14+18+i]->SetMaximum(120);    
  }

  // str = 50
  for(Int_t i=0; i<18; i++) {
    hist[50+i] = new TH1D(Form("qaTRD_recPoints_nCls_sm%d",i),
			  Form("sm%d;time bin;number of clusters",i),
			  35, -0.5, 34.5);
  }

  // str = 68
  for(Int_t i=0; i<18; i++) {
    hist[68+i] = new TH1D(Form("qaTRD_recPoints_totalCharge_sm%d", i),
			  Form("sm%d;time bin;total charge", i),
			  35, -0.5, 34.5);
  }

  hist[86] = new TH1D("qaTRD_recPoints_signal", ";amplitude", 200, -0.5, 199.5);
  hist[87] = new TH2D("qaTRD_recPoints_detMap", ";sm;chamber", 18, -0.5, 17.5, 30, -0.5, 29.5);

  for(Int_t i=0; i<18; i++)
    hist[88+i] = new TH2D(Form("qaTRD_recPoints_XY_sm%d", i), 
			  Form("SM%d;Y;X",i), 240, -60, 60, 200, 290, 370);

  for(Int_t i=0; i<18; i++)
    hist[106+i] = new TH2D(Form("qaTRD_recPoints_XPad_sm%d", i), 
			  Form("SM%d;Y;X",i), 144, -0.5, 143.5, 200, 290, 370);

 
  hist[124] = new TH1D("qRef", "ref", 100, 0, 1e4);

  fHist = new TObjArray(200);
  for(Int_t i=0; i<kNhist; i++) {
    //hist[i]->Sumw2();
    fHist->AddAt(hist[i], i);
  }

  // reference histograms
  if (fRef) {
    for(Int_t i=0; i<540; i++) {
      fRefHist[i] = new TH2D(Form("refRecPoints_sm%d", i), "",
			     16, -0.5, 15.5, 144, -0.5, 143.5); //, 30, -0.5, 29.5);
    }
  } else {
    
    TFile *refFile = new TFile("outRef.root");
    refFile->cd("TRD/RecPoints");

    for(Int_t i=0; i<540; i++) {
      fRefHist[i] = (TH2D*)gDirectory->Get(Form("refRecPoints_sm%d", i));
    }
  }
}

//____________________________________________________________________________ 

void AliTRDqaRecPoints::AddEvent(TTree * clustersTree)
{
  //  
  // Makes data from RecPoints
  // 
  
  //  Info("MakeRecPoints", "making");

  Int_t nsize = Int_t(clustersTree->GetTotBytes() / (sizeof(AliTRDcluster))); 
  TObjArray *clusterArray = new TObjArray(nsize+1000); 

  TBranch *branch = clustersTree->GetBranch("TRDcluster");
  if (!branch) {
    AliError("Can't get the branch !");
    return;
  }
  branch->SetAddress(&clusterArray); 

  // Loop through all entries in the tree
  Int_t nEntries   = (Int_t) clustersTree->GetEntries();
  Int_t nbytes     = 0;
  AliTRDcluster *c = 0;
  Int_t nDet[540];
  for (Int_t i=0; i<540; i++) nDet[i] = 0;

  for (Int_t iEntry = 0; iEntry < nEntries; iEntry++) {    

    //printf("Entry = %d\n", iEntry);

    // Import the tree
    nbytes += clustersTree->GetEvent(iEntry);  

    // Get the number of points in the detector
    Int_t nCluster = clusterArray->GetEntriesFast();  

    // Loop through all TRD digits
    for (Int_t iCluster = 0; iCluster < nCluster; iCluster++) { 
      c = (AliTRDcluster *) clusterArray->UncheckedAt(iCluster);

      Int_t iDet = c->GetDetector();
      if (iDet < 0 || iDet > 539) continue;

      
      Int_t iSM = iDet / 30;
      //Int_t iStack = iDet % 30;
      Int_t nPad = c->GetNPads();

      if (fnPad && nPad != fnPad) continue;
      
      //if (iSM == 0 && iStack == 29) continue;
      //if (iSM == 8 && iStack == 11) continue;
      //if (iSM == 8 && iStack == 7)  continue;      
      
      Int_t padRow = c->GetPadRow();
      Int_t padCol = c->GetPadCol();
      //Int_t timeBin = c->GetPadTime();

      Double_t refQ = 0;

      if (fRef) {
	fRefHist[iDet]->Fill(padRow, padCol, c->GetQ());
      } else {
	Int_t bin = fRefHist[iDet]->FindBin(padRow, padCol);
	refQ = fRefHist[iDet]->GetBinContent(bin);
	//printf("bin = %d\n", bin);
      }

      ((TH1D*)fHist->At(124))->Fill(refQ);
      //printf("ref Q = %lf\n", refQ);
      
      Double_t charge = c->GetQ() - (refQ / (490. * 30));
      if (charge < 0) continue;

      if (charge > 20) {
	((TH2D*)fHist->At(88+iSM))->Fill(c->GetY(), c->GetX());
	((TH2D*)fHist->At(106+iSM))->Fill(c->GetPadCol(), c->GetX());
      }

      nDet[iDet]++;
      ((TH1D*)fHist->At(0))->Fill(iDet);
      ((TH1D*)fHist->At(86))->Fill(charge);
      ((TH1D*)fHist->At(1))->Fill(iDet, charge);
      ((TH1D*)fHist->At(2))->Fill(c->GetNPads());
      if (c->GetNPads() < 6)
	((TH1D*)fHist->At(1+c->GetNPads()))->Fill(c->GetCenter());
      
      //if (c->GetPadTime() < 5)
      ((TH2D*)fHist->At(7))->Fill(padRow, c->GetPadCol());
      ((TH1D*)fHist->At(8))->Fill(c->GetPadTime());

      ((TH3D*)fHist->At(10))->Fill(iDet, c->GetPadTime(), charge);
   
      ((TH1D*)fHist->At(50+iSM))->Fill(c->GetPadTime());
      ((TH1D*)fHist->At(68+iSM))->Fill(c->GetPadTime(), charge);

      // PRF for 2pad
      //if (c->GetNPads() == 2) {
      Short_t *sig = c->GetSignals();
      Double_t frac = -10;

      if (sig[0] == 0 && sig[1] == 0 && sig[2] == 0 && sig[5] == 0 && sig[6] == 0) 
	frac = 1. * sig[4] / (sig[3] + sig[4]);

      if (sig[0] == 0 && sig[1] == 0 && sig[4] == 0 && sig[5] == 0 && sig[6] == 0)
	frac = -1. * sig[2] / (sig[2] + sig[3]);

      if (frac > -10)  ((TProfile*)fHist->At(11))->Fill(c->GetCenter(), frac);
	
      //}
    }
  }

  for(Int_t i=0; i<540; i++) 
    if (nDet[i] > 0) ((TH1D*)fHist->At(9))->Fill(nDet[i]);

  delete clusterArray;

  /*
  TFile *outFile = new TFile("outQA.root", "RECREATE");
  outFile->mkdir("TRD");
  gDirectory->cd("TRD");
  gDirectory->mkdir("RecPoints");
  gDirectory->cd("RecPoints");
  fHist->Write();
  outFile->Close();
  */
}

//____________________________________________________________________________
Commit	Line	Data
e508dc19	1	/**************************************************************************
	2	* Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. *
	3	* *
	4	* Author: The ALICE Off-line Project. *
	5	* Contributors are mentioned in the code where appropriate. *
	6	* *
	7	* Permission to use, copy, modify and distribute this software and its *
	8	* documentation strictly for non-commercial purposes is hereby granted *
	9	* without fee, provided that the above copyright notice appears in all *
	10	* copies and that both the copyright notice and this permission notice *
	11	* appear in the supporting documentation. The authors make no claims *
	12	* about the suitability of this software for any purpose. It is *
	13	* provided "as is" without express or implied warranty. *
	14	**************************************************************************/
	15
	16	/* $Id: AliTRDqaRecPoints.cxx 23387 2008-01-17 17:25:16Z cblume $ */
	17
	18	////////////////////////////////////////////////////////////////////////////
	19	// //
	20	// Produces the data needed to calculate the quality assurance. //
	21	// All data must be mergeable objects. //
	22	// //
	23	// Author: //
	24	// Sylwester Radomski (radomski@physi.uni-heidelberg.de) //
	25	// //
	26	////////////////////////////////////////////////////////////////////////////
	27
	28	// --- ROOT system ---
	29	#include <TClonesArray.h>
	30	#include <TFile.h>
	31	#include <TH1D.h>
	32	#include <TH2D.h>
	33	#include <TH3D.h>
	34	#include <TProfile.h>
	35	#include <TF1.h>
	36	#include <TCanvas.h>
	37
	38	// --- AliRoot header files ---
	39	#include "AliESDEvent.h"
	40	#include "AliLog.h"
	41	#include "AliTRDcluster.h"
	42	#include "AliTRDqaRecPoints.h"
	43	#include "AliTRDgeometry.h"
	44	#include "AliTRDdataArrayI.h"
	45
	46	#include "AliQAChecker.h"
	47
	48	ClassImp(AliTRDqaRecPoints)
	49
	50	//____________________________________________________________________________
	51
	52	AliTRDqaRecPoints::AliTRDqaRecPoints() :
	53	TObject(),
	54	fnEvents(0),
	55	fHist(0),
	56	fnPad(0),
	57	fRef(0)
	58	{
	59	//
	60	// Default constructor
	61	//
	62
	63	}
	64
65	//____________________________________________________________________________
66
67	AliTRDqaRecPoints::AliTRDqaRecPoints(const AliTRDqaRecPoints &/qa/) :
68	TObject(),
69	fnEvents(0),
70	fHist(0),
71	fnPad(0),
72	fRef(0)
73	{
74	//
75	// Copy constructor
76	//
77
78	}
79
80	//____________________________________________________________________________
81	void AliTRDqaRecPoints::Process(const char* filename)
82	{
83	//
84	// Detector specific actions at end of cycle
85	//
86	//TStopwatch watch;
87	//watch.Start();
88
89	AliInfo("End of TRD cycle");
90
91	//if (task == AliQA::kRECPOINTS) {
92
93	TH1D *hist = new TH1D("fitHist", "", 200, -0.5, 199.5);
94	//fHist->Print();
95
96	// fill detector map;
97	for(int i=0; i<540; i++) {
98	Double_t v = ((TH1D*)fHist->At(0))->GetBinContent(i+1);
99	Int_t sm = i/30;
100	Int_t det = i%30;
101
102	TH2D detMap = (TH2D)fHist->At(87);
103	Int_t bin = detMap->FindBin(sm, det);
104	detMap->SetBinContent(bin, v);
105	}
106
107
108	// Rec points full chambers
109	for (Int_t i=0; i<540; i++) {
110
111	//AliInfo(Form("I = %d", i));
112
113	//TH1D h = ((TH2D)fHist->At(1))->ProjectionY(Form("qaTRD_recPoints_amp_%d",i), i+1, i+1);
114	hist->Reset();
115	for(Int_t b=1; b<hist->GetXaxis()->GetNbins()-1; b++) {
116	Double_t xvalue = hist->GetBinCenter(b);
117	Int_t bin = ((TH2D*)fHist->At(1))->FindBin(i,xvalue);
118	Double_t value = ((TH2D*)fHist->At(1))->GetBinContent(bin);
119	hist->SetBinContent(b, value);
120	}
121
122	//printf("Sum = %d %f\n", i, hist->GetSum());
123	if (hist->GetSum() < 100) continue; // chamber not present
124
125	hist->Fit("landau", "q0", "goff", 10, 180);
126	TF1 *fit = hist->GetFunction("landau");
127	((TH1D*)fHist->At(12))->Fill(fit->GetParameter(1));
128	((TH1D*)fHist->At(13))->Fill(fit->GetParameter(2));
129	}
130
131	// time-bin by time-bin sm by sm
132	for(Int_t i=0; i<18; i++) { // loop over super-modules
133
134	for(Int_t j=0; j<35; j++) { // loop over time bins
135
136	//TH1D h = ((TH3D)fHist->At(10))->ProjectionZ(Form("ampTime_%d",i), i+1, i+1, j+1, j+1);
137	hist->Reset();
138	for(Int_t b=1; b<hist->GetXaxis()->GetNbins()-1; b++) {
139	Double_t xvalue = hist->GetBinCenter(b);
140	Double_t svalue = 0;
141
142	for(Int_t det=i30; det<(i+1)30; det++) { // loop over detectors
143	Int_t bin = ((TH3D*)fHist->At(10))->FindBin(det,j,xvalue);
144	Double_t value = ((TH3D*)fHist->At(10))->GetBinContent(bin);
145	svalue += value;
146	}
147	//printf("v = %f\n", value);
148	hist->SetBinContent(b, svalue);
149	}
150
151	if (hist->GetSum() < 100) continue;
152	//printf("fitting %d %d %f\n", i, j, hist->GetSum());
153
154	hist->Fit("landau", "q0", "goff", 10, 180);
155	TF1 *fit = hist->GetFunction("landau");
156
157	TH1D h1 = (TH1D)fHist->At(14+18+i);
158	Int_t bin = h1->FindBin(j);
159	// printf("%d %d %d\n", det, j, bin);
160	h1->SetBinContent(bin, TMath::Abs(fit->GetParameter(1)));
161	}
162	}
163
164
165	// time-bin by time-bin chamber by chamber
166
167	for (Int_t i=0; i<540; i++) {
168
169	//TH1D test = ((TH3D)fHist->At(10))->ProjectionZ(Form("ampTime_%d",i), i+1, i+1, 0, 35);
170	//if (test->GetSum() < 100) continue;
171
172	//AliInfo(Form("fitting det = %d", i));
173
174	for(Int_t j=0; j<35; j++) {
175
176	//TH1D h = ((TH3D)fHist->At(10))->ProjectionZ(Form("ampTime_%d",i), i+1, i+1, j+1, j+1);
177	hist->Reset();
178	for(Int_t b=1; b<hist->GetXaxis()->GetNbins()-1; b++) {
179	Double_t xvalue = hist->GetBinCenter(b);
180	Int_t bin = ((TH3D*)fHist->At(10))->FindBin(i,j,xvalue);
181	Double_t value = ((TH3D*)fHist->At(10))->GetBinContent(bin);
182	//printf("v = %f\n", value);
183	hist->SetBinContent(b, value);
184	}
185
186	if (hist->GetSum() < 100) continue;
187	//printf("fitting %d %d %f\n", i, j, hist->GetSum());
188
189	hist->Fit("landau", "q0", "goff", 10, 180);
190	TF1 *fit = hist->GetFunction("landau");
191
192	Int_t sm = i/30;
193	Int_t det = i%30;
194	TH2D h2 = (TH2D)fHist->At(14+sm);
195	Int_t bin = h2->FindBin(det,j);
196	// printf("%d %d %d\n", det, j, bin);
197	h2->SetBinContent(bin, TMath::Abs(fit->GetParameter(1)));
198	h2->SetBinError(bin,fit->GetParError(1));
199	}
200	}
201
202	if (hist) delete hist;
203
204
205	TFile *outFile = new TFile(filename, "RECREATE");
206	outFile->mkdir("TRD");
207	gDirectory->cd("TRD");
208	gDirectory->mkdir("RecPoints");
209	gDirectory->cd("RecPoints");
210	fHist->Write();
211
212	if (fRef) {
213	for(Int_t i=0; i<540; i++) {
214	//fRefHist[i]->Scale(1./fnEvents);
215	fRefHist[i]->Write();
216	}
217	}
218
219	outFile->Close();
220
221	}
222
223	//____________________________________________________________________________
224
225	void AliTRDqaRecPoints::Init()
226	{
227	//
228	// Create Reconstructed Points histograms in RecPoints subdir
229	//
230
231	//const Int_t kNhist = 14 + 4 * 18 + 2;
232	const Int_t kNhist = 88+2*18+1;
233	TH1 *hist[kNhist];
234
235	hist[0] = new TH1D("qaTRD_recPoints_det", ";Detector ID of the cluster", 540, -0.5, 539.5);
236	hist[1] = new TH2D("qaTRD_recPoints_amp", ";Amplitude", 540, -0.5, 539, 200, -0.5, 199.5);
237	hist[2] = new TH1D("qaTRD_recPoints_npad", ";Number of Pads", 12, -0.5, 11.5);
238
239	hist[3] = new TH1D("qaTRD_recPoints_dist2", ";residuals [2pad]", 100, -1, 1);
240	hist[4] = new TH1D("qaTRD_recPoints_dist3", ";residuals [3pad]", 100, -1, 1);
241	hist[5] = new TH1D("qaTRD_recPoints_dist4", ";residuals [4pad]", 100, -1, 1);
242	hist[6] = new TH1D("qaTRD_recPoints_dist5", ";residuals [5pad]", 100, -1, 1);
243
244	hist[7] = new TH2D("qaTRD_recPoints_rowCol", ";row;col", 16, -0.5, 15.5, 145, -0.5, 144.5);
245	hist[8] = new TH1D("qaTRD_recPoints_time", ";time bin", 35, -0.5, 34.5);
246	hist[9] = new TH1D("qaTRD_recPoints_nCls", ";number of clusters", 500, -0.5, 499.5);
247
248	hist[10] = new TH3D("qaTRD_recPoints_sigTime", ";chamber;time bin;signal",
249	540, -0.5, 539.5, 35, -0.5, 34.5, 200, -0.5, 199.5);
250	hist[11] = new TProfile("qaTRD_recPoints_prf", ";distance;center of gravity"
251	, 120, -0.6, 0.6, -1.2, 1.2, "");
252
253	hist[12] = new TH1D("qaTRD_recPoints_ampMPV", ";amplitude MPV", 150, 0, 150);
254	hist[13] = new TH1D("qaTRD_recPoints_ampSigma", ";amplitude Sigma", 200, 0, 200);
255
256	// chamber by chamber
257	for(Int_t i=0; i<18; i++) {
258	hist[14+i] = new TH2D(Form("qaTRD_recPoints_sigTime_sm%d",i), Form("sm%d;det;time bin"),
259	30, -0.5, 29.5, 35, -0.5, 34.5);
260	hist[14+i]->SetMinimum(20);
261	hist[14+i]->SetMaximum(40);
262	}
263
264	// time bin by time bin sm-by-sm
265	for(Int_t i=0; i<18; i++) {
266	hist[14+18+i] = new TH1D(Form("qaTRD_recPoints_sigTimeShape_sm%d", i),
267	Form("sm%d;time bin;signal"),
268	35, -0.5, 34.5);
269
270	hist[14+18+i]->SetMaximum(120);
271	}
272
273	// str = 50
274	for(Int_t i=0; i<18; i++) {
275	hist[50+i] = new TH1D(Form("qaTRD_recPoints_nCls_sm%d",i),
276	Form("sm%d;time bin;number of clusters",i),
277	35, -0.5, 34.5);
278	}
279
280	// str = 68
281	for(Int_t i=0; i<18; i++) {
282	hist[68+i] = new TH1D(Form("qaTRD_recPoints_totalCharge_sm%d", i),
283	Form("sm%d;time bin;total charge", i),
284	35, -0.5, 34.5);
285	}
286
287	hist[86] = new TH1D("qaTRD_recPoints_signal", ";amplitude", 200, -0.5, 199.5);
288	hist[87] = new TH2D("qaTRD_recPoints_detMap", ";sm;chamber", 18, -0.5, 17.5, 30, -0.5, 29.5);
289
290	for(Int_t i=0; i<18; i++)
291	hist[88+i] = new TH2D(Form("qaTRD_recPoints_XY_sm%d", i),
292	Form("SM%d;Y;X",i), 240, -60, 60, 200, 290, 370);
293
294	for(Int_t i=0; i<18; i++)
295	hist[106+i] = new TH2D(Form("qaTRD_recPoints_XPad_sm%d", i),
296	Form("SM%d;Y;X",i), 144, -0.5, 143.5, 200, 290, 370);
297
298
299	hist[124] = new TH1D("qRef", "ref", 100, 0, 1e4);
300
301	fHist = new TObjArray(200);
302	for(Int_t i=0; i<kNhist; i++) {
303	//hist[i]->Sumw2();
304	fHist->AddAt(hist[i], i);
305	}
306
307	// reference histograms
308	if (fRef) {
309	for(Int_t i=0; i<540; i++) {
310	fRefHist[i] = new TH2D(Form("refRecPoints_sm%d", i), "",
311	16, -0.5, 15.5, 144, -0.5, 143.5); //, 30, -0.5, 29.5);
312	}
313	} else {
314
315	TFile *refFile = new TFile("outRef.root");
316	refFile->cd("TRD/RecPoints");
317
318	for(Int_t i=0; i<540; i++) {
319	fRefHist[i] = (TH2D*)gDirectory->Get(Form("refRecPoints_sm%d", i));
320	}
321	}
322	}
323
324	//____________________________________________________________________________
325
326	void AliTRDqaRecPoints::AddEvent(TTree * clustersTree)
327	{
328	//
329	// Makes data from RecPoints
330	//
331
332	// Info("MakeRecPoints", "making");
333
334	Int_t nsize = Int_t(clustersTree->GetTotBytes() / (sizeof(AliTRDcluster)));
335	TObjArray *clusterArray = new TObjArray(nsize+1000);
336
337	TBranch *branch = clustersTree->GetBranch("TRDcluster");
338	if (!branch) {
339	AliError("Can't get the branch !");
340	return;
341	}
342	branch->SetAddress(&clusterArray);
343
344	// Loop through all entries in the tree
345	Int_t nEntries = (Int_t) clustersTree->GetEntries();
346	Int_t nbytes = 0;
347	AliTRDcluster *c = 0;
348	Int_t nDet[540];
349	for (Int_t i=0; i<540; i++) nDet[i] = 0;
350
351	for (Int_t iEntry = 0; iEntry < nEntries; iEntry++) {
352
353	//printf("Entry = %d\n", iEntry);
354
355	// Import the tree
356	nbytes += clustersTree->GetEvent(iEntry);
357
358	// Get the number of points in the detector
359	Int_t nCluster = clusterArray->GetEntriesFast();
360
361	// Loop through all TRD digits
362	for (Int_t iCluster = 0; iCluster < nCluster; iCluster++) {
363	c = (AliTRDcluster *) clusterArray->UncheckedAt(iCluster);
364
365	Int_t iDet = c->GetDetector();
366	if (iDet < 0 \|\| iDet > 539) continue;
367
368
369	Int_t iSM = iDet / 30;
370	//Int_t iStack = iDet % 30;
371	Int_t nPad = c->GetNPads();
372
373	if (fnPad && nPad != fnPad) continue;
374
375	//if (iSM == 0 && iStack == 29) continue;
376	//if (iSM == 8 && iStack == 11) continue;
377	//if (iSM == 8 && iStack == 7) continue;
378
379	Int_t padRow = c->GetPadRow();
380	Int_t padCol = c->GetPadCol();
381	//Int_t timeBin = c->GetPadTime();
382
383	Double_t refQ = 0;
384
385	if (fRef) {
386	fRefHist[iDet]->Fill(padRow, padCol, c->GetQ());
387	} else {
388	Int_t bin = fRefHist[iDet]->FindBin(padRow, padCol);
389	refQ = fRefHist[iDet]->GetBinContent(bin);
390	//printf("bin = %d\n", bin);
391	}
392
393	((TH1D*)fHist->At(124))->Fill(refQ);
394	//printf("ref Q = %lf\n", refQ);
395
396	Double_t charge = c->GetQ() - (refQ / (490. * 30));
397	if (charge < 0) continue;
398
399	if (charge > 20) {
400	((TH2D*)fHist->At(88+iSM))->Fill(c->GetY(), c->GetX());
401	((TH2D*)fHist->At(106+iSM))->Fill(c->GetPadCol(), c->GetX());
402	}
403
404	nDet[iDet]++;
405	((TH1D*)fHist->At(0))->Fill(iDet);
406	((TH1D*)fHist->At(86))->Fill(charge);
407	((TH1D*)fHist->At(1))->Fill(iDet, charge);
408	((TH1D*)fHist->At(2))->Fill(c->GetNPads());
409	if (c->GetNPads() < 6)
410	((TH1D*)fHist->At(1+c->GetNPads()))->Fill(c->GetCenter());
411
412	//if (c->GetPadTime() < 5)
413	((TH2D*)fHist->At(7))->Fill(padRow, c->GetPadCol());
414	((TH1D*)fHist->At(8))->Fill(c->GetPadTime());
415
416	((TH3D*)fHist->At(10))->Fill(iDet, c->GetPadTime(), charge);
417
418	((TH1D*)fHist->At(50+iSM))->Fill(c->GetPadTime());
419	((TH1D*)fHist->At(68+iSM))->Fill(c->GetPadTime(), charge);
420
421	// PRF for 2pad
422	//if (c->GetNPads() == 2) {
423	Short_t *sig = c->GetSignals();
424	Double_t frac = -10;
425
426	if (sig[0] == 0 && sig[1] == 0 && sig[2] == 0 && sig[5] == 0 && sig[6] == 0)
427	frac = 1. * sig[4] / (sig[3] + sig[4]);
428
429	if (sig[0] == 0 && sig[1] == 0 && sig[4] == 0 && sig[5] == 0 && sig[6] == 0)
430	frac = -1. * sig[2] / (sig[2] + sig[3]);
431
432	if (frac > -10) ((TProfile*)fHist->At(11))->Fill(c->GetCenter(), frac);
433
434	//}
435	}
436	}
437
438	for(Int_t i=0; i<540; i++)
439	if (nDet[i] > 0) ((TH1D*)fHist->At(9))->Fill(nDet[i]);
440
441	delete clusterArray;
442
443	/*
444	TFile *outFile = new TFile("outQA.root", "RECREATE");
445	outFile->mkdir("TRD");
446	gDirectory->cd("TRD");
447	gDirectory->mkdir("RecPoints");
448	gDirectory->cd("RecPoints");
449	fHist->Write();
450	outFile->Close();
451	*/
452	}
453
454	//____________________________________________________________________________