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correct the cluster rejection by energy range and number of cells cut
[u/mrichter/AliRoot.git] / PWG4 / macros / AnalysisTrainPWG4Jets.C
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1//===================== ANALYSIS TRAIN =========================================
2// To use: copy this macro to your work directory, modify the global part to match
3// your needs, then run root.
4// root[0] .L AnalysisTrain.C
5// Grid full mode as below (other modes: test, offline, submit, terminate)
6// root[1] AnalysisTrainPWG-244Jets("grid", "full")
7// CAF mode (requires root v5-23-02 + aliroot v4-16-Rev08)
8// root[2] AnalysisTrainPWG4Jets("proof")
9// Local mode requires AliESds.root or AliAOD.root in ./data directory
10// root[3] AnalysisTrainPWG4Jets("local")
11// In proof and grid modes, a token is needed and sourcing the produced environment file.
12//
13// If 'saveTrain' flag is set, the train will generate a directory name and run
14// in this directory. A configuration file 'ConfigTrain.C' will be generated.
15// One can replay at any time the train via:
16// root[1] AnalysisTrainPWG4Jets(ana_mode, plugin_mode, "train_default_<date>/ConfigTrain.C")
17
18// For Usage with fastjet run in "offline" first and then "submit"
19// jdl and analysismacro are automatically patched after "offline" mode
20
21// =============================================================================
22// ### General Steering variables
23// =============================================================================
24//== general setup variables
25TString kTrainName = "testAnalysis"; // *CHANGE ME* (no blancs or special characters)
26TString kJobTag = "PWG4 Jet Tasks analysis train configured"; // *CHANGE ME*
27
28// Usage of par files ONLY in grid mode and ONLY if the code is not available
29// in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
30// To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
31// AliRoot.
32Bool_t kUsePAR = kFALSE; // use par files for extra libs
33Bool_t kUseCPAR = kFALSE; // use par files for common libs
34Bool_t kFillAOD = kTRUE; // switch of AOD filling for on the fly analysis
35Bool_t kFilterAOD = kTRUE;
36Float_t kJetTriggerPtCut = 20; // pT for jet trigger in case of iFilter==2
37Int_t kSaveAOD = 8; // Bit switch 1 = Full AOD 2 = Jet AOD , 4 = PartCorr, 8 = JCORRAN
38//== general input and output variables
39
40Int_t iAODanalysis = 1; // Analysis on input AOD's
41Int_t iFilterAnalysis = 0; // Analysis on input AOD's
42Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
43Int_t iCentralitySelection = 0; // Use the centrality
44Int_t iESDfilter = 0; // ESD to AOD filter (barrel + muon tracks)
45Int_t iPhysicsSelection = 1; // ESD to AOD filter (barrel + muon tracks)
46UInt_t iPhysicsSelectionFlag = 1; // set by pyshics selection and passed to the task, kMB, kUserDefined etc
47Bool_t useTender = kFALSE; // use tender wagon
48Bool_t kUseKinefilter = kFALSE; // use Kinematics filter
49Bool_t kUseMuonfilter = kFALSE; // use Kinematics filter
50TString kCommonOutputFileName = "PWG4_JetTasksOutput.root";
51TString kCaloQAOutputFileName = "PWG4_CaloQAOutput.root";
52
53
54//== general process variables
55
56// ### Other flags to steer the analysis
57//==============================================================================
58Bool_t kSkipTerminate = kTRUE; // Do not call Teminate
59Bool_t kUseDate = kFALSE; // use date in train name
60Bool_t kUseDebug = kTRUE; // activate debugging
61Int_t kErrorIgnoreLevel = -1; // takes the errror print level from .rootrc
62// From TError.h:
63// const Int_t kUnset = -1;
64// const Int_t kPrint = 0;
65// const Int_t kInfo = 1000;
66// const Int_t kWarning = 2000;
67// const Int_t kError = 3000;
68// const Int_t kBreak = 4000;
69// const Int_t kSysError = 5000;
70// const Int_t kFatal = 6000;
71Int_t kUseSysInfo = 0; // activate debugging
72Long64_t kNumberOfEvents = 1234567890; // Number of events to process from the chain
73Bool_t kUseMC = kTRUE; // use MC info
74Bool_t kIsMC = kTRUE; // is MC info, if false it overwrites Use(AOD)MC
75Bool_t kUseAODMC = kTRUE; // use MC infA
76Bool_t kUseESDTags = kFALSE; // use ESD tags for selection
77Bool_t kUseTR = kFALSE; // use track references
78Bool_t kUseAODTags = kFALSE; // use AOD tags
79Bool_t kSaveTrain = kFALSE; // save train configuration as:
80Bool_t kIsPbPb = kFALSE; // Pb+Pb
81
82
83// ### Analysis modules to be included. Some may not be yet fully implemented.
84//==============================================================================
85Int_t iJETAN = 1; // Jet analysis (PWG4) // 1 write standard 2 write non-standard jets, 3 wrtie both
86Int_t iJETSUBTRACT = 1; // Jet background subtration
87TList kJetListSpectrum; // list of jets contains TObjString of possible jet finder names
88TExMap kJetMapSpectrum; // Maps the jet finder pairs to be used in the spectrum task second number negative no pair other wise (j1+1) + (1000 * (j2+1)) +10000 * (j3+1)
89TExMap kJetBackMapSpectrum; // Maps the jet finder pairs with the background branch used, just for countint of trackrefs
90Int_t kJetMapOffset[3] = {10000,100,1};
91TString kDefaultJetBranch = ""; // is currently set when filled (iJETAN or clusters) or from config macro
92TString kDefaultJetBackgroundBranch = ""; // is currently set when filled (jet clsuters
93TString kDefaultJetBackgroundBranchCut1 = ""; // is currently set when filled (jet clsuters
94TString kDefaultJetBackgroundBranchCut2 = ""; // is currently set when filled (jet clsuters
95TString kDefaultJetBackgroundBranch_extra = ""; // is currently set when filled (jet clsuters)
96TString kJetSubtractBranches = ""; // is currently set when filled (jet clsuters
97TString kJetSubtractBranchesCut1 = ""; // is currently set when filled (jet clsuters
98TString kJetSubtractBranchesCut2 = ""; // is currently set when filled (jet clsuters
99TString kJetSubtractBranches_extra = ""; // is currently set when filled (jet clsuters
100
101TString kDefaultJetBranchMC = ""; // is currently set when filled (iJETAN or clusters) or from config macro
102TString kDefaultJetBackgroundBranchMC = ""; // is currently set when filled (jet clsuters
103TString kDefaultJetBranchMC2 = ""; // is currently set when filled (iJETAN or clusters) or from config macro
104TString kDefaultJetBackgroundBranchMC2 = ""; // is currently set when filled (jet clsuters
105TString kJetSubtractMask1 = "B0";
106TString kJetSubtractMask2 = "B%d";
107Int_t iDIJETAN = 1;
108Int_t iJETANLib = 1;
109Int_t iPWGPPQASym = 0; // Eva's QA task compiled on the fly...
110Int_t iPWG4FastEmbedding = 0; // Generate non-standard AOD for embedding
111Int_t iPWG4JetTasks = 0; // all jet tasks flag for lib laoding
112Int_t iPWG4JetServices = 0; // jet spectrum analysis
113Int_t iPWG4JetSpectrum = 0; // jet spectrum analysis
114Int_t iPWG4JetResponse = 0; // jet response matrix
115Int_t iPWG4JCORRAN = 0; // JCORRAN module
116Int_t iPWG4UE = 0; // Underlying Event analysis
117Int_t iPWG4LeadingUE = 0; // Underlying Event analysis
118Int_t iPWG4CorrectionsUE = 0; // Underlying Event analysis
119Int_t iPWG4TmpSourceSara = 0; // Underlying Event analysis not in svn
120Int_t iPWG4Fragmentation = 1; // Official Fragmentation
121Int_t iPWG4JetChem = 0; // Jet chemistry
122Int_t iPWG4PtQAMC = 0; // Marta's QA tasks
123Int_t iPWG4PtTrackQA = 0; // Marta's QA tasks
124Int_t iPWG4PtSpectra = 0; // Marta's QA tasks
125Int_t iPWG4PtQATPC = 0; // Marta's QA tasks
126Int_t iPWG4Cosmics = 0; // Marta's Cosmics Taks
127Int_t iPWG4ThreeJets = 0; // Sona's thrust task
128Int_t iPWG4QGSep = 0; // Sona's QG Separation task
129Int_t iPWG4Minijet = 0; // Eva's Mini Jet Task cluster task
130Int_t iPWG4KMeans = 0; // Andreas' KMeans task
131Int_t iPWG4Cluster = 0; // CKB cluster task
132Int_t iEMCUtilLibs = 0; // Flag to satisfy dependence on EMC utils
133Int_t iPWG4PartCorrLibs = 0; // Gustavo's part corr analysis
134Int_t iPWG4PartCorr = 0; // Gustavo's part corr analysis
135Int_t iPWG4CaloQA = 0; // Gustavo's part corr analysis
136Int_t iPWG4JetCorr = 0; // Paul's jet corr analysis
137Int_t iPWG4Tagged = 0; // Gustavo's part corr analysis
138Int_t iPWG4omega3pi = 0; // Omega to 3 pi analysis (PWG4)
139Int_t iPWG4GammaConvLib = 0; // Gamma Conversio
140Int_t iPWG4GammaConv = 0; // Gamma Conversio
141Int_t iPWG4CaloConv = 0; // Gamma Conversio
142Int_t kHighPtFilterMask = 32; // change depending on the used AOD Filter
143TString kDeltaAODJetName = "AliAOD.Jets.root";
144TString kDeltaAODJetNameInput = "";
145TString kDeltaAODJCORRANName = "AliAOD.JCORRAN.root";
146TString kDeltaAODPartCorrName = "AliAOD.PartCorr.root";
147TString kFastEmbeddingAOD = "emb/AliAOD.root";
148TString kFastEmbAODList = "";
149
150//==============================================================================
151// ### PROOF Steering varibales
152//==============================================================================
153//== proof setup variables
154TString kProofCluster = "alicecaf.cern.ch";
155Bool_t kProofUseAFPAR = kFALSE; // use AF special par file
156TString kProofAFversion = "AF-v4-17";
157//== proof input and output variables
158TString kProofDataSet = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
159Bool_t kProofSaveToAlien = kFALSE; // save proof outputs in AliEn train_[trainName]_ddMonthyyyy_time.C
160TString kProofOutdir = "";
161Bool_t kProofClearPackages = kFALSE;
162Int_t kProofEvents = 10000;
163Int_t kProofOffset = 0;
164//== proof process variables
165
166
167//==============================================================================
168// ### Grid plugin Steering varibiables
169//==============================================================================
170//== grid plugin setup variables
171Bool_t kPluginUse = kTRUE; // do not change
172Bool_t kPluginUseProductionMode = kFALSE; // use the plugin in production mode
173TString kPluginRootVersion = "v5-30-02"; // *CHANGE ME IF MORE RECENT IN GRID*
174TString kPluginAliRootVersion = "v4-21-01a-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
175Bool_t kPluginMergeViaJDL = kTRUE; // merge via JDL
176Bool_t kPluginFastReadOption = kFALSE; // use xrootd tweaks
177Bool_t kPluginOverwriteMode = kTRUE; // overwrite existing collections
178Int_t kPluginOutputToRunNumber = 1; // write the output to subdirs named after run number
179// TString kPluginExecutableCommand = "root -b -q";
180TString kPluginExecutableCommand = "source /Users/kleinb/setup_32bit_aliroot_trunk_clean_root_trunk.sh; alienroot -b -q ";
181
182// == grid plugin input and output variables
183TString kGridDatadir = "/alice/sim/PDC_08b/LHC09a1/AOD/";
184Int_t kGridMaxRunsFromList = 999999999;
185Int_t kGridOffsetRunFromList = 0; // skip the first n runs from the list
186TString kGridLocalRunList = "";
187TString kGridOutdir = ""; // AliEn output directory. If blank will become output_<kTrainName>
188TString kGridDataSet = ""; // sub working directory not to confuse different run xmls
189TString kGridExtraAliendirLevel = ""; // sub working directory not to confuse different run xmls
190Int_t kGridRunRange[2] = {0, -1}; // Set the run range
191TString kGridRunPattern = "%03d"; // important for leading zeroes!!
192TString kGridPassPattern = "";
193TString kGridExtraFiles = ""; // files that will be added to the input list in the JDL...
194Int_t kGridMaxMergeFiles = 25; // Number of files merged in a chunk grid run range
195TString kGridMergeExclude = "AliAOD.root"; // Files that should not be merged
196TString kGridOutputStorages = "disk=2"; // Make replicas on the storages
197// == grid process variables
198Int_t kGridRunsPerMaster = 100; // Number of runs per master job
199Int_t kGridFilesPerJob = 100; // Maximum number of files per job (gives size of AOD)
200
201//==============================================================================
202// ### Local Steering variables
203//==============================================================================
204//== local setup variables
205//== local input and output variables
206TString kLocalXMLDataset = ""; // Change local xml dataset for local interactive analysis
207TString kLocalDataList = "local_deltaaod.txt"; // Change local xml dataset for local interactive analysis
208// == local process variables
209
210TString kPluginMode = "";
211TString kAnalysisMode = "";
212
213
214// Temporaries.
215TString anaPars = "";
216TString anaLibs = "";
217TString anaLibsExtra = "";
218TString anaSources = "";
219// Function signatures
220class AliAnalysisAlien;
221class AliAnalysisManager;
222
223//______________________________________________________________________________
224void AnalysisTrainPWG4Jets(const char *analysis_mode="local",
225 const char *plugin_mode="",
226 const char *config_file="",Int_t iOffset = 0,Int_t iTotal = 0)
227{
228// Main analysis train macro. If a configuration file is provided, all parameters
229// are taken from there but may be altered by CheckModuleFlags.
230
231 // these flag may be needed by the config file
232 kPluginMode = plugin_mode;
233 kAnalysisMode = analysis_mode;
234
235 if (strlen(config_file) && !LoadConfig(config_file)) return;
236 if(iTotal>0)kGridMaxRunsFromList = iTotal; // overwrites the settings from config file
237 if(iOffset)kGridOffsetRunFromList = iOffset;
238 if(iOffset)kProofOffset = iOffset;
239
240
241 TString smode(analysis_mode);
242 smode.ToUpper();
243 if (kSaveTrain)WriteConfig();
244 // Check compatibility of selected modules
245 CheckModuleFlags(smode);
246 // gROOT->ProcessLine(".trace");
247
248 printf("==================================================================\n");
249 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", kTrainName.Data(),smode.Data());
250 printf("==================================================================\n");
251 printf("= Configuring analysis train for: =\n");
252 if (iAODanalysis) printf("= AOD analysis =\n");
253 else printf("= ESD analysis =\n");
254 if (iPhysicsSelection) printf("= Physics selection =\n");
255 if(iCentralitySelection)printf("= Centrality selection =\n");
256 if (useTender) printf("= Using tender =\n");
257 if (iESDfilter) printf("= ESD filter =\n");
258 if (iJETAN) printf("= Jet analysis =\n");
259 printf("==================================================================\n");
260
261 char *printMask = ":: %20s %10d\n";
262 printf(printMask,"Fill AOD",(UInt_t)kFillAOD);
263 printf(printMask,"Save AOD", (UInt_t)kSaveAOD);
264 printf(printMask,"MC truth", (UInt_t)kUseMC);
265 printf(printMask,"KINE filter", (UInt_t)kUseKinefilter);
266 printf(printMask,"track refs", (UInt_t)kUseTR);
267 printf(printMask,"tags", (UInt_t)kUseESDTags);
268 printf(printMask,"AOD tags", (UInt_t)kUseAODTags);
269 printf(printMask,"debugging", (UInt_t)kUseDebug);
270 printf(printMask,"PAR files", (UInt_t)kUsePAR);
271 printf(printMask,"AliEn plugin", (UInt_t)kPluginUse);
272 printf(printMask,"JETAN subtract", (UInt_t)iJETSUBTRACT);
273 printf(printMask,"PWGPP QA sym", iPWGPPQASym);
274 printf(printMask,"PWG4 Source Sara",iPWG4TmpSourceSara);
275 printf(printMask,"PWG4 Fragmentation",iPWG4Fragmentation);
276 printf(printMask,"PWG4 Jet Chem",iPWG4JetChem);
277 printf(printMask,"PWG4 Jet tasks",iPWG4JetTasks);
278 printf(printMask,"PWG4 Jet Services",iPWG4JetServices);
279 printf(printMask,"PWG4 Jet Spectrum",iPWG4JetSpectrum);
280 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
281 printf(printMask,"PWG4 UE",iPWG4UE);
282 printf(printMask,"PWG4 Leading UE",iPWG4LeadingUE);
283 printf(printMask,"PWG4 Corrections UE",iPWG4CorrectionsUE);
284 printf(printMask,"PWG4 Pt QA MC",iPWG4PtQAMC);
285 printf(printMask,"PWG4 Pt QA track",iPWG4PtTrackQA);
286 printf(printMask,"PWG4 Pt Spectra",iPWG4PtSpectra);
287 printf(printMask,"PWG4 Pt QA TPC",iPWG4PtQATPC);
288 printf(printMask,"PWG4 Cosmics",iPWG4Cosmics);
289 printf(printMask,"PWG4 Three Jets",iPWG4ThreeJets);
290 printf(printMask,"PWG4 QGSep",iPWG4QGSep);
291 printf(printMask,"PWG4 Minijet",iPWG4Minijet);
292 printf(printMask,"PWG4 KMeans",iPWG4KMeans);
293 printf(printMask,"PWG4 Cluster",iPWG4Cluster);
294 printf(printMask,"PWG4 Part Corr",iPWG4PartCorr);
295 printf(printMask,"PWG4 Calo QA",iPWG4CaloQA);
296 printf(printMask,"PWG4 Jet Corr",iPWG4JetCorr);
297 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
298 printf(printMask,"PWG4 Tagged",iPWG4Tagged);
299 printf(printMask,"PWG4 omega to 3 pi ",iPWG4omega3pi);
300 printf(printMask,"PWG4 Gamma Conv",iPWG4GammaConv);
301 printf(printMask,"PWG4 Calo Conv",iPWG4CaloConv);
302 printf(printMask,"HighPt FilterMask",kHighPtFilterMask);
303
304 //==========================================================================
305 // Connect to back-end system
306 if (!Connect(smode)) {
307 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
308 return;
309 }
310
311 // Load common libraries and set include path
312 if (!LoadCommonLibraries(smode)) {
313 ::Error("AnalysisTrain", "Could not load common libraries");
314 return;
315 }
316
317
318
319 // Make the analysis manager and connect event handlers
320 AliAnalysisManager *mgr = new AliAnalysisManager("PWG4Train", "pwg4 mini train");
321 if (kCommonOutputFileName.Length()>0)mgr->SetCommonFileName(kCommonOutputFileName.Data());
322 if (kProofSaveToAlien) mgr->SetSpecialOutputLocation(kProofOutdir);
323 mgr->SetNSysInfo(0);
324 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
325 if (kUseSysInfo)mgr->SetNSysInfo(kUseSysInfo);
326 mgr->SetSkipTerminate(kSkipTerminate);
327
328 // Load analysis specific libraries
329 if (!LoadAnalysisLibraries(smode)) {
330 ::Error("AnalysisTrain", "Could not load analysis libraries");
331 return;
332 }
333
334 // Create input handler (input container created automatically)
335 if (iAODanalysis) {
336 // AOD input handler
337 AliAODInputHandler *aodH = new AliAODInputHandler();
338 mgr->SetInputEventHandler(aodH);
339 if (kDeltaAODJetNameInput.Length()){
340 Printf("Adding Friend %s",kDeltaAODJetNameInput.Data());
341 aodH->AddFriend(kDeltaAODJetNameInput.Data());
342 }
343 // if (iPWG4PartCorr) aodH->AddFriend(Form("deltas/%s"kDeltaAODJetName.Data()));
344 } else {
345 // ESD input handler
346 AliESDInputHandler *esdHandler = new AliESDInputHandler();
347 if (kUseESDTags) esdHandler->SetReadTags();
348 esdHandler->SetReadFriends(kFALSE);
349 mgr->SetInputEventHandler(esdHandler);
350 // if(iPWG4PtQATPC&& !kTrainName.Contains("pass5"))esdHandler->SetActiveBranches("ESDfriend");
351
352 }
353
354 // Monte Carlo handler
355 if (kUseMC && !iAODanalysis) {
356 AliMCEventHandler* mcHandler = new AliMCEventHandler();
357 mgr->SetMCtruthEventHandler(mcHandler);
358 mcHandler->SetReadTR(kUseTR);
359 }
360 // AOD output container, created automatically when setting an AOD handler
361 if (iAODhandler) {
362 // AOD output handler
363 AliAODHandler* aodHandler = new AliAODHandler();
364 aodHandler->SetOutputFileName("AliAOD.root");
365 aodHandler->SetFillAODforRun(kFillAOD);
366 //
367 mgr->SetOutputEventHandler(aodHandler);
368 AliAnalysisDataContainer * cout_aod = mgr->GetCommonOutputContainer();
369 cout_aod->SetSpecialOutput();
370 }
371 // Debugging if needed
372
373 if (kUseDebug){
374 mgr->SetDebugLevel(3);
375 }
376 if(kUseSysInfo>0){
377 mgr->RegisterExtraFile("syswatch.root");
378 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
379 kGridMergeExclude += "syswatch.root";
380 }
381 else{
382 AliLog::SetGlobalLogLevel(AliLog::kError);
383 }
384
385
386 //==========================================================================
387 // Create the chain. In this example it is created only from ALIEN files but
388 // can be done to work in batch or grid mode as well.
389 TChain *chain = CreateChain(smode, plugin_mode);
390
391 //==========================================================================
392 // Load the tasks configuration macros for all wagons. These files are supposed now to be
393 // in the current workdir, but in AliEn they will be in the file catalog,
394 // mapped from AliRoot and pecified in the jdl input list.
395
396 // For now connection to top input container and common AOD output container
397 // is done in this macro, but in future these containers will be connected
398 // from each task configuration macro.
399
400 //
401 // Tender and supplies. Needs to be called for every event.
402 //
403
404 if (useTender) {
405 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/TenderSupplies/AddTaskTender.C");
406 AliAnalysisTaskSE *tender = AddTaskTender(kTRUE);
407 // tender->SelectCollisionCandidates();
408 tender->SetDebugLevel(2);
409 }
410
411
412 Float_t fTrackEtaWindow = 0.9;
413 Float_t fJetEtaWindow = 0.5;
414 Float_t fVertexWindow = 10;
415 /*
416 if(kIsPbPb){// for pass1
417 Float_t fTrackEtaWindow = 0.8;
418 Float_t fJetEtaWindow = 0.4;
419 }
420 */
421
422
423 if(iPhysicsSelection && !iAODanalysis){
424 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
425 Int_t iTriggerHIC = 0;
426 Bool_t rejectBkg = true;
427 if(kIsPbPb){
428 iTriggerHIC = 2;
429 rejectBkg = false; // for the moment...
430 }
431 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kIsMC,true,rejectBkg);
432
433 // mgr->RegisterExtraFile("event_stat.root");
434 mgr->AddStatisticsTask();
435 }
436 else{
437 iPhysicsSelectionFlag = AliVEvent::kMB;
438 }
439
440 if(kIsPbPb&&!iAODanalysis){
441
442 // has to run before AOD filter
443 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskCentrality.C");
444 AliCentralitySelectionTask *taskC = AddTaskCentrality();
445 if (!taskC) ::Warning("AnalysisTrainPWG4Jets", "AliCentralitySelectionTask cannot run for this train conditions - EXCLUDED");
446
447
448 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskEventplane.C");
449 AliEPSelectionTask *taskEP = AddTaskEventplane();
450 if (!taskEP) ::Warning("AnalysisTrainPWG4Jets", "AliEventplan cannot run for this train conditions - EXCLUDED");
451 }
452
453 if (iESDfilter && !iAODanalysis) {
454 // ESD filter task configuration.
455 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskESDFilterPWG4Train.C");
456 // switch on centrality make for PbPb
457 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilterPWG4Train(kUseKinefilter); // carefull, if physics selection is enabled you may get not primary vertex pointer later on...
458 taskesdfilter->SetEnableFillAOD(!kFilterAOD);
459 taskesdfilter->DisableV0s();
460 taskesdfilter->DisableCascades();
461 taskesdfilter->DisableKinks();
462 taskesdfilter->DisablePmdClusters();
463 taskesdfilter->DisableCaloClusters();
464 taskesdfilter->DisableCells();
465
466 if(kIsMC){
467 mgr->RegisterExtraFile("pyxsec_hists.root");
468 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
469 kGridMergeExclude += "pyxsec_hists.root";
470
471 }
472 }
473
474 // AOD tags
475 if (kUseAODTags) {
476 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
477 mgr->AddTask(tagTask);
478 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
479 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
480 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
481 mgr->ConnectOutput(tagTask, 1, coutTags);
482 }
483
484 if (iPWG4FastEmbedding) {
485 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFastEmbedding.C");
486 AliAnalysisTaskFastEmbedding *taskEmbedding = 0;
487 if(kFastEmbAODList.Length()) taskEmbedding = AddTaskFastEmbedding(kFastEmbAODList, 1);
488 else taskEmbedding = AddTaskFastEmbedding(kFastEmbeddingAOD, 0);
489 taskEmbedding->SetJetBranch("jetsAOD_UA104_B0_Filter00256_Cut01000");
490 // taskEmbedding->SetEvtSelecMode(AliAnalysisTaskFastEmbedding::kEventsAll);
491 // taskEmbedding->SetDebugLevel(10);
492 }
493
494 // Jet analysis
495 if (iJETAN) {
496 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJets.C");
497 AliAnalysisTaskJets *taskjets = 0;
498 if(iJETAN&1){
499 /*
500 taskjets = AddTaskJets(kHighPtFilterMask);
501 taskjets->SetName("StandardJets");
502 taskjets->SetNonStdBranch("");
503 */
504 }
505 if(iJETAN&2){
506 // Set only few jet finders backgroudn subtraction w an wo
507
508 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
509 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
510 TString cTmp("");
511 cTmp = taskjets->GetNonStdBranch();
512 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
513
514 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,2.,0); // no background subtraction
515 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
516 TString cTmp("");
517 cTmp = taskjets->GetNonStdBranch();
518 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
519
520
521 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
522 if(kIsPbPb){
523 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
524 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
525 cTmp = taskjets->GetNonStdBranch();
526 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
527 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,2.,2); // background subtraction
528 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
529 cTmp = taskjets->GetNonStdBranch();
530 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
531 }
532
533
534
535 // SICONE
536 /*
537 taskjets = AddTaskJets("AOD","SISCONE",0.4,kHighPtFilterMask,0.15,0); //no background subtraction to be done later....
538 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
539 cTmp = taskjets->GetNonStdBranch();
540 if(cTmp.Length()>0)kJetSubtractBranches += Form("%s ",cTmp.Data());
541 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
542 */
543 if(kUseAODMC){
544 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
545 if(kIsPbPb){
546 taskjets = AddTaskJets("AODMC","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
547 cTmp = taskjets->GetNonStdBranch();
548 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
549 taskjets = AddTaskJets("AODMC2","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
550 cTmp = taskjets->GetNonStdBranch();
551 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
552 }
553 else{
554 taskjets = AddTaskJets("AODMC","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
555 cTmp = taskjets->GetNonStdBranch();
556 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
557 taskjets = AddTaskJets("AODMC2","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
558 cTmp = taskjets->GetNonStdBranch();
559 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
560 }
561 }
562 if(kDeltaAODJetName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJetName.Data());
563 }
564 if (!taskjets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
565 }
566
567
568 if (iPWG4FastEmbedding && iJETAN) {
569 AliAnalysisTaskJets *taskEmbJets = AddTaskJets("AODextra", "FASTJET", 0.4, kHighPtFilterMask);
570 taskEmbJets->ReadAODFromOutput();
571 kJetSubtractBranches_extra += Form("%s ", taskEmbJets->GetNonStdBranch());
572
573 taskEmbJets = AddTaskJets("AODextraonly", "FASTJET", 0.4, kHighPtFilterMask);
574 taskEmbJets->ReadAODFromOutput();
575
576 taskEmbJets = AddTaskJets("AODextra", "UA1", 0.4, kHighPtFilterMask,1.,0);
577 taskEmbJets->ReadAODFromOutput();
578 taskEmbJets = AddTaskJets("AODextraonly", "UA1", 0.4, kHighPtFilterMask,1.,0);
579 taskEmbJets->ReadAODFromOutput();
580 taskEmbJets = AddTaskJets("AODextra", "UA1", 0.4, kHighPtFilterMask,1.,2);
581 taskEmbJets->ReadAODFromOutput();
582 }
583
584 if(iPWG4Cluster){
585 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCluster.C");
586 AliAnalysisTaskJetCluster *taskCl = 0;
587 Float_t fCenUp = 0;
588 Float_t fCenLo = 0;
589 if(kIsPbPb&&!kIsMC){
590 fCenLo = 0;
591 fCenUp = 80;
592 }
593 if(iPWG4Cluster&1){
594
595 if(kIsPbPb){
596 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow,0); // this one is for the background and random jets, random cones with no skip
597 taskCl->SetBackgroundCalc(kTRUE);
598 taskCl->SetNRandomCones(1);
599 // taskCl->SetDebugLevel(11);
600 taskCl->SetCentralityCut(fCenLo,fCenUp);
601
602 taskCl->SetJetTypes(1<<0|1<<2|1<<3);
603 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
604 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
605 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),0)));
606 kJetListSpectrum.Add(new TObjString(Form("%sRandomCone_random",taskCl->GetJetOutputBranch())));
607
608 kJetSubtractBranches += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomConeSkip00");
609 kJetSubtractBranches += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomCone_random");
610
611 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),1.0,fTrackEtaWindow,fVertexWindow,0); // this one is for the background and random jets, random cones with no skip
612 taskCl->SetNRandomCones(1);
613 taskCl->SetBackgroundCalc(kTRUE);
614 taskCl->SetCentralityCut(fCenLo,fCenUp);
615 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
616
617 taskCl->SetJetTypes(1<<0|1<<2|1<<3);
618 kDefaultJetBackgroundBranchCut1 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
619 kJetSubtractBranchesCut1 += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomConeSkip00");
620 kJetSubtractBranchesCut1 += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomCone_random");
621 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
622 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),0)));
623 kJetListSpectrum.Add(new TObjString(Form("%sRandomCone_random",taskCl->GetJetOutputBranch())));
624
625 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),2.0,fTrackEtaWindow,fVertexWindow,0); // this one is for the background and random jets, random cones with no skip
626 taskCl->SetNRandomCones(1);
627 taskCl->SetBackgroundCalc(kTRUE);
628 taskCl->SetCentralityCut(fCenLo,fCenUp);
629 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
630
631 taskCl->SetJetTypes(1<<0|1<<2|1<<3);
632 kDefaultJetBackgroundBranchCut2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
633 kJetSubtractBranchesCut2 += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomConeSkip00");
634 kJetSubtractBranchesCut2 += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomCone_random");
635 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
636 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),0)));
637 kJetListSpectrum.Add(new TObjString(Form("%sRandomCone_random",taskCl->GetJetOutputBranch())));
638
639
640 if (iPWG4FastEmbedding) {
641 AliAnalysisTaskJetCluster *taskClEmb = 0;
642 taskClEmb = AddTaskJetCluster("AODextra","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // this one is for the background and random jets
643 taskClEmb->SetBackgroundCalc(kTRUE);
644 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
645 if(iAODanalysis==2)taskClEmb->SetAODTrackInput(kTRUE);
646 kDefaultJetBackgroundBranch_extra = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskClEmb->GetJetOutputBranch());
647
648 taskClEmb = AddTaskJetCluster("AODextraonly","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // this one is for the background and random jets
649 taskClEmb->SetBackgroundCalc(kFALSE);
650 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
651 if(iAODanalysis==2)taskClEmb->SetAODTrackInput(kTRUE);
652
653 taskClEmb = AddTaskJetCluster("AODextra","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow);
654 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
655 taskClEmb->SetBackgroundBranch(kDefaultJetBackgroundBranch_extra.Data());
656 kJetSubtractBranches_extra += Form("%s ",taskClEmb->GetJetOutputBranch());
657 if(iAODanalysis==2)taskClEmb->SetAODTrackInput(kTRUE);
658
659 taskClEmb = AddTaskJetCluster("AODextraonly","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow);
660 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
661 if(iAODanalysis==2)taskClEmb->SetAODTrackInput(kTRUE);
662 }
663
664 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.2,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow,0); // this one is for the background and random jets
665 taskCl->SetNRandomCones(1);
666 taskCl->SetBackgroundCalc(kTRUE);
667 taskCl->SetCentralityCut(fCenLo,fCenUp);
668 taskCl->SetJetTypes(1<<0|1<<2|1<<3);
669 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
670 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),0)));
671 kJetListSpectrum.Add(new TObjString(Form("%sRandomCone_random",taskCl->GetJetOutputBranch())));
672
673
674
675 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
676 }
677 else{
678 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // this one is for the background jets
679 taskCl->SetBackgroundCalc(kTRUE);
680 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
681 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
682 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
683
684 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow);
685 taskCl->SetBackgroundCalc(kTRUE);
686 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
687 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
688 }
689
690 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // thid id sldo got the random cones but avoiding the two leading jets
691 taskCl->SetCentralityCut(fCenLo,fCenUp);
692 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
693 taskCl->SetNRandomCones(1);
694 if(iFilterAnalysis==2){
695 taskCl->SetJetTriggerPtCut(kJetTriggerPtCut);
696 }
697 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
698
699 taskCl->SetJetTypes(1<<0|1<<2); // only store the RC on full event with 2 removed
700 kDefaultJetBranch = taskCl->GetJetOutputBranch();
701 kJetSubtractBranches += Form("%s ",taskCl->GetJetOutputBranch());
702 // kJetSubtractBranches += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomConeSkip02");
703 // kJetSubtractBranches += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomCone_random");
704 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
705 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),2)));
706 // kJetListSpectrum.Add(new TObjString(Form("%sRandomCone_random",taskCl->GetJetOutputBranch())));
707
708 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),1.0,fTrackEtaWindow,fVertexWindow);
709 taskCl->SetNRandomCones(1);
710 taskCl->SetCentralityCut(fCenLo,fCenUp);
711 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
712 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchCut1.Data());
713
714 taskCl->SetJetTypes(1<<0|1<<2); // only store the RC on full event with 2 removed
715 kJetSubtractBranchesCut1 += Form("%s ",taskCl->GetJetOutputBranch());
716 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
717 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),2)));
718
719
720 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),2.0,fTrackEtaWindow,fVertexWindow);
721 taskCl->SetCentralityCut(fCenLo,fCenUp);
722 taskCl->SetNRandomCones(1);
723 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
724 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchCut2.Data());
725 taskCl->SetJetTypes(1<<0|1<<2); // only store the RC on full event with 2 removed
726 kJetSubtractBranchesCut2 += Form("%s ",taskCl->GetJetOutputBranch());
727 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
728 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),2)));
729
730 // tmp track qa...
731 /*
732 taskCl = AddTaskJetCluster("AOD","",1<<8,iPhysicsSelectionFlag,"ANTIKT",0.4,2,1,kDeltaAODJetName.Data(),2.0);
733 taskCl->SetCentralityCut(fCenLo,fCenUp);
734 taskCl->SetFilterMask(1<<4|1<<8,1);
735 */
736 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.2,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow,2);
737 taskCl->SetCentralityCut(fCenLo,fCenUp);
738 taskCl->SetNRandomCones(1);
739 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
740 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
741
742 taskCl->SetJetTypes(1<<0|1<<2);
743 kJetSubtractBranches += Form("%s ",taskCl->GetJetOutputBranch());
744 // kJetSubtractBranches += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomConeSkip00");
745 // kJetSubtractBranches += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomCone_random");
746 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
747 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),2)));
748
749
750 if(kUseAODMC){
751 if(kIsPbPb){
752 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // this one is for the background and random jets
753 taskCl->SetBackgroundCalc(kTRUE);
754 kDefaultJetBackgroundBranchMC = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
755 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
756 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
757
758 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fVertexWindow,fVertexWindow); // this one is for the background and random jets
759 taskCl->SetBackgroundCalc(kTRUE);
760 kDefaultJetBackgroundBranchMC2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
761 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
762 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
763 }
764 else{
765 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // this one is for the background and random jets
766 taskCl->SetBackgroundCalc(kTRUE);
767 kDefaultJetBackgroundBranchMC = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
768 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
769
770 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // this one is for the background and random jets
771 taskCl->SetBackgroundCalc(kTRUE);
772 kDefaultJetBackgroundBranchMC2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
773 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
774 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
775 // pp background calcs...
776 }
777
778 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow);
779 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC.Data());
780 kDefaultJetBranchMC = taskCl->GetJetOutputBranch();
781 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
782 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
783
784 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow);
785 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC2.Data());
786 kDefaultJetBranchMC2 = taskCl->GetJetOutputBranch();
787 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
788 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
789 }
790
791
792 if (!taskCl) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCluster cannot run for this train conditions - EXCLUDED");
793 }
794 }
795
796
797 if(iJETSUBTRACT&&kJetSubtractBranches.Length()){
798 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetBackgroundSubtract.C");
799 AliAnalysisTaskJetBackgroundSubtract *taskSubtract = 0;
800 if(kJetSubtractBranches.Length()){
801
802
803
804
805 for(int iB = 1;iB<3;iB++){
806 if(iB>2)continue;
807 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches,iB,kJetSubtractMask1.Data(),kJetSubtractMask2.Data());
808 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data()); taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
809 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
810 taskSubtract->SetKeepJets(kTRUE);
811 TString cTmp;
812 TObjArray *objArr = kJetSubtractBranches.Tokenize(" ");
813 for(int iJB = 0;iJB<objArr->GetEntries();iJB++){
814 TObjString *ostr = (TObjString*)objArr->At(iJB);
815 cTmp = ostr->GetString().Data();
816 cTmp.ReplaceAll(kJetSubtractMask1.Data(),Form(kJetSubtractMask2.Data(),iB));
817 kJetListSpectrum.Add(new TObjString(cTmp.Data()));
818 }
819
820 // taskSubtract->SetDebugLevel(3);
821 if(iB==2){
822 if(kJetSubtractBranches.Contains(kDefaultJetBranch.Data())&&kIsPbPb){
823 kDefaultJetBranch.ReplaceAll(taskSubtract->GetToReplace(),Form(taskSubtract->GetReplacementMask(),taskSubtract->GetSubtractionMethod()));
824 }
825 }
826
827 }
828
829 //
830 // cut1
831 Int_t iB = 2;
832 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranchesCut1,iB,kJetSubtractMask1.Data(),kJetSubtractMask2.Data(),"Cut1000");
833 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranchCut1.Data());
834 taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
835 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
836
837 objArr = kJetSubtractBranchesCut1.Tokenize(" ");
838 for(int iJB = 0;iJB<objArr->GetEntries();iJB++){
839 TObjString *ostr = (TObjString*)objArr->At(iJB);
840 cTmp = ostr->GetString().Data();
841 cTmp.ReplaceAll(kJetSubtractMask1.Data(),Form(kJetSubtractMask2.Data(),iB));
842 kJetListSpectrum.Add(new TObjString(cTmp.Data()));
843 }
844
845 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranchesCut2,iB,kJetSubtractMask1.Data(),kJetSubtractMask2.Data(),"Cut2000");
846 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranchCut2.Data());
847 taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
848 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
849
850 objArr = kJetSubtractBranchesCut2.Tokenize(" ");
851 for(int iJB = 0;iJB<objArr->GetEntries();iJB++){
852 TObjString *ostr = (TObjString*)objArr->At(iJB);
853 cTmp = ostr->GetString().Data();
854 cTmp.ReplaceAll(kJetSubtractMask1.Data(),Form(kJetSubtractMask2.Data(),iB));
855 kJetListSpectrum.Add(new TObjString(cTmp.Data()));
856 }
857
858 }
859 if(kJetSubtractBranches_extra.Length()){
860 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches_extra,2,kJetSubtractMask1.Data(),kJetSubtractMask2.Data(),"extra");
861 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch_extra.Data());
862 taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
863 //taskSubtract->SetDebugLevel(3);
864 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
865 if(kJetSubtractBranches_extra.Contains(kDefaultJetBranch.Data())){
866 kDefaultJetBranch.ReplaceAll(taskSubtract->GetToReplace(),Form(taskSubtract->GetReplacementMask(),taskSubtract->GetSubtractionMethod()));
867 }
868 }
869 if (!taskSubtract) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetBackgroundSubtrac cannot run for this train conditions - EXCLUDED");
870 }
871
872 if (iDIJETAN) {
873 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskDiJets.C");
874 AliAnalysisTaskDiJets *taskdijets = 0;
875 if(iDIJETAN&1)taskdijets = AddTaskDiJets();
876 if (!taskdijets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
877 if(iDIJETAN&2){
878 taskdijets = AddTaskDiJets("jetsAOD_CDF07");
879 taskdijets = AddTaskDiJets("jetsAOD_DA07");
880 taskdijets = AddTaskDiJets("jetsAOD_FASTJET07");
881 taskdijets = AddTaskDiJets("jetsAOD_FASTKT07");
882 taskdijets = AddTaskDiJets("jetsAOD_SISCONE07");
883 taskdijets = AddTaskDiJets("jetsAOD_UA107");
884 }
885 }
886
887 if(iPWGPPQASym){
888 gROOT->LoadMacro("$ALICE_ROOT/PWGPP/PilotTrain/AddTaskQAsym.C");
889 AliAnalysisTaskQASym *taskQASym = AddTaskQAsym(-1);
890 if (!taskQASym) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQASym cannot run for this train conditions - EXCLUDED");
891 }
892
893
894
895 if(iPWG4TmpSourceSara){
896 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskEta.C");
897 AliAnalysisTaskEta *taskEta = AddTaskEta();
898 if (!taskEta) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskEta cannot run for this train conditions - EXCLUDED");
899 }
900
901
902 if(iPWG4JetServices){
903 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetServices.C");
904 AliAnalysisTaskJetServices *taskjetServ = 0;
905 taskjetServ = AddTaskJetServices("/Users/kleinb/Dropbox/SharedJets/Christian/Files/PWG4_JetTasksOutput_110818a.root");
906 if (!taskjetServ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetServices cannot run for this train conditions - EXCLUDED");
907 if(kGridRunRange[0]>0)taskjetServ->SetRunRange(kGridRunRange[0],kGridRunRange[1]);
908 else taskjetServ->SetRunRange(110000,160000);
909 taskjetServ->SetMCData(kIsMC);
910 taskjetServ->SetUsePhysicsSelection((Bool_t)iPhysicsSelection);
911 taskjetServ->SetPhysicsSelectionFlag(iPhysicsSelectionFlag); //
912 taskjetServ->SetNonStdFile(kDeltaAODJetName.Data());
913 taskjetServ->SetTrackEtaWindow(fTrackEtaWindow);
914 taskjetServ->SetZVertexCut(fVertexWindow);
915 taskjetServ->SetFilterMask(kHighPtFilterMask);
916
917 if(kIsPbPb)taskjetServ->SetCollisionType(AliAnalysisTaskJetServices::kPbPb);
918 else taskjetServ->SetCollisionType(AliAnalysisTaskJetServices::kPP);
919 if(kIsPbPb){
920 if(kDeltaAODJetName.Length()>0&&kFilterAOD)taskjetServ->SetFilterAODCollisions(kTRUE);
921 // else if(iAODanalysis)taskjetServ->SetFilterAODCollisions(kTRUE);
922 // taskjetServ->SetDebugLevel(3);
923 }
924 if(iAODanalysis){
925 //
926 taskjetServ->SetAODInput(kTRUE);
927 }
928 }
929
930 if(iPWG4JetSpectrum){
931 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetSpectrum2.C");
932 AliAnalysisTaskJetSpectrum2 *taskjetSpectrum = 0;
933 TString bkgClusters = kDefaultJetBackgroundBranch.Data();
934 bkgClusters.ReplaceAll(Form("%s_",AliAODJetEventBackground::StdBranchName()),"");
935 Printf("############# Possible jet branches ###################");
936 for(int iJF = 0;iJF < kJetListSpectrum.GetSize();iJF++){
937 TObjString *objStr = (TObjString*)kJetListSpectrum.At(iJF);
938 Printf("%3d: %s",iJF+1,objStr->GetString().Data());
939 }
940
941 // Printf("Type q to exit");if(getchar()=='q')return;
942 if(iPWG4JetSpectrum&1){
943 if(kIsPbPb){
944 for(int iJF = 0;iJF < kJetListSpectrum.GetSize();iJF++){
945 Long64_t value = kJetMapSpectrum(iJF+1);
946 Printf("iJF: %d value: %d", iJF+1,(Int_t)value);
947 if(value==0)continue;
948 TObjString *objStr = (TObjString*)kJetListSpectrum.At(iJF);
949 TString bName1 = objStr->GetString().Data();
950 TString bName2[3];
951
952 TObjString *objStrBkg = (TObjString*)kJetListSpectrum.At(iJF);
953 TString bBkgName1("");
954 TString bBkgName2[3];
955
956 Long64_t valueBkg1 = kJetBackMapSpectrum(iJF+1);
957 if(valueBkg1>0){
958 TObjString *objStrBkg = (TObjString*)kJetListSpectrum.At(valueBkg1-1);
959 bBkgName1 = objStrBkg->GetString().Data();
960 }
961 Int_t iPartner = 0;
962 if(value>0){
963 Int_t iJF2 = -1;
964 for(int i = 0;i<3;i++){
965 iJF2 = value/kJetMapOffset[i]-1;
966 value = value%kJetMapOffset[i];
967 Printf("%d %d", iJF2+1,(Int_t)value);
968 if(iJF2>=0&&iJF2<kJetListSpectrum.GetSize()){
969 TObjString *objStr2 = (TObjString*)kJetListSpectrum.At(iJF2);
970 bName2[iPartner] = objStr2->GetString().Data();
971 Long64_t valueBkg2 = kJetBackMapSpectrum(iJF2+1);
972 if(valueBkg2>0){
973 TObjString *objStrBkg2 = (TObjString*)kJetListSpectrum.At(valueBkg2-1);
974 bBkgName2[iPartner] = objStrBkg2->GetString().Data();
975 }
976 iPartner++;
977 }
978 }
979 }
980
981
982 // loop over all centralities
983 for(int ic = 0;ic<5;ic++){
984 if(ic!=0)continue;
985 Bool_t bDone = kFALSE;
986 for(int i = 0;i<TMath::Max(iPartner,1);i++){
987 if(bName2[i].Length()){
988 taskjetSpectrum = AddTaskJetSpectrum2(bName1.Data(),bName2[i].Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,ic);
989 bDone = kTRUE;
990 }
991 else{
992 if(!bDone){
993 taskjetSpectrum = AddTaskJetSpectrum2(bName1.Data(),bName2[i].Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,ic);
994 bDone = kTRUE;
995 }
996 else{
997 continue;
998 }
999 }
1000 Printf("%s/%s %s/%s",bName1.Data(),bBkgName1.Data(),bName2[i].Data(),bBkgName2[i].Data());
1001
1002 // setting all the other things...
1003 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
1004 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
1005
1006 // negative values do not fill the track histos
1007 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetGenFull,-1);
1008 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetGen,-1);
1009 if(!bName1.Contains("ANTIKT")||bName1.Contains("Cone")){
1010 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetRecFull,-1);
1011 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetRec,-1);
1012 }
1013
1014
1015 if(bName2[i].Length()==0){
1016 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetGenFull,0);
1017 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetGen,0);
1018 }
1019 if(iAODanalysis==1){
1020 taskjetSpectrum->SetAODJetInput(kTRUE);
1021 taskjetSpectrum->SetAODTrackInput(kTRUE);
1022 }
1023 else if (iAODanalysis==2){
1024 taskjetSpectrum->SetAODTrackInput(kTRUE);
1025 taskjetSpectrum->SetAODJetInput(kFALSE);
1026 }
1027 // taskjetSpectrum->SetDebugLevel(11);
1028 taskjetSpectrum->SetBranchBkgRec(bBkgName1.Data());
1029 taskjetSpectrum->SetBranchBkgGen(bBkgName2[i].Data());
1030 }
1031 }
1032 }
1033 }
1034 else{ // ! PbPb
1035 Int_t i = 0;
1036
1037 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),
1038 "",kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
1039
1040
1041
1042 if(kDefaultJetBranchMC.Length()){
1043 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),
1044 kDefaultJetBranchMC.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
1045 // taskjetSpectrum->SetMinJetPt(10);
1046 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
1047 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
1048 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
1049 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
1050 if(iAODanalysis)SetAODInput(taskjetSpectrum);
1051 }
1052 if(kDefaultJetBranchMC2.Length()){
1053 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),
1054 kDefaultJetBranchMC2.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
1055 // taskjetSpectrum->SetMinJetPt(10);
1056 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
1057 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
1058 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
1059 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
1060 if(iAODanalysis)SetAODInput(taskjetSpectrum);
1061 }
1062
1063 /*
1064 TString tmp2(kDefaultJetBranch.Data());
1065 tmp2.ReplaceAll(Form(kJetSubtractMask2.Data(),0),Form(kJetSubtractMask2.Data(),2));
1066 taskjetSpectrum = AddTaskJetSpectrum2(tmp2.Data(),kDefaultJetBranch.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
1067 // taskjetSpectrum->SetDebugLevel(3);
1068 // taskjetSpectrum->SetMinJetPt(10);
1069 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
1070 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
1071 taskjetSpectrum->SetTrackEtaWindow(0.8);
1072 taskjetSpectrum->SetJetEtaWindow(0.4);
1073
1074 // check the old subtracted vs. the new subtracted
1075 TString tmp3(kDefaultJetBranch.Data());
1076 tmp3.ReplaceAll(Form(kJetSubtractMask2.Data(),0),Form(kJetSubtractMask2.Data(),3));
1077 taskjetSpectrum = AddTaskJetSpectrum2(tmp3.Data(),kDefaultJetBranch.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
1078 // taskjetSpectrum->SetDebugLevel(3);
1079 // taskjetSpectrum->SetMinJetPt(10);
1080 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
1081 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
1082 taskjetSpectrum->SetTrackEtaWindow(0.8);
1083 taskjetSpectrum->SetJetEtaWindow(0.4);
1084 if(iAODanalysis)SetAODInput(taskjetSpectrum);
1085 */
1086 }
1087 if (!taskjetSpectrum) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetSpectrum2 cannot run for this train conditions - EXCLUDED");
1088 }
1089 }
1090 AliAnalysisManager::SetCommonFileName("PWG4_Fragmentation.root");
1091 if(iPWG4Fragmentation){
1092 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFragmentationFunction.C");
1093 AliAnalysisTaskFragmentationFunction *taskFrag = 0;
1094 if(kUseAODMC){
1095
1096 }
1097 else{
1098
1099
1100 for(int ic = 1;ic < 5;ic++){
1101 // Anti-kT
1102 taskFrag = AddTaskFragmentationFunction(1<<23,kHighPtFilterMask, ic);
1103 if(kDeltaAODJetName.Length()>0)taskFrag->SetNonStdFile(kDeltaAODJetName.Data());
1104 if(iAODanalysis==2)taskFrag->UseAODInputJets(kFALSE);
1105
1106 // UA1
1107 taskFrag = AddTaskFragmentationFunction(1<<0,kHighPtFilterMask, ic);
1108 if(kDeltaAODJetName.Length()>0)taskFrag->SetNonStdFile(kDeltaAODJetName.Data());
1109 if(iAODanalysis==2)taskFrag->UseAODInputJets(kFALSE);
1110
1111 // SISCONE
1112 if(ic==1){
1113 /*
1114 taskFrag = AddTaskFragmentationFunction(1<<28,kHighPtFilterMask, ic);
1115 taskFrag = AddTaskFragmentationFunction(1<<29,kHighPtFilterMask, ic);
1116 taskFrag = AddTaskFragmentationFunction(1<<30,kHighPtFilterMask, ic);
1117 */
1118
1119
1120
1121 // Anti-kT B2 - B3
1122 if(!iAODanalysis==1){
1123 taskFrag = AddTaskFragmentationFunction(1<<26,kHighPtFilterMask, ic);
1124 if(kDeltaAODJetName.Length()>0)taskFrag->SetNonStdFile(kDeltaAODJetName.Data());
1125 if(iAODanalysis==2)taskFrag->UseAODInputJets(kFALSE);
1126
1127 taskFrag = AddTaskFragmentationFunction(1<<27,kHighPtFilterMask, ic);
1128 if(kDeltaAODJetName.Length()>0)taskFrag->SetNonStdFile(kDeltaAODJetName.Data());
1129 if(iAODanalysis==2)taskFrag->UseAODInputJets(kFALSE);
1130 }
1131 }
1132
1133 }
1134
1135
1136 }
1137 if (!taskFrag) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskFragmentationFunction cannot run for this train conditions - EXCLUDED");
1138 }
1139
1140 if(iPWG4JetChem){
1141 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetChem.C");
1142 AliAnalysisTask *taskChem = AddTaskJetChem(kHighPtFilterMask);
1143 if (!taskChem) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetChem cannot run for this train conditions - EXCLUDED");
1144 }
1145
1146 if (iPWG4JetResponse) {
1147 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetResponse.C");
1148 AliAnalysisTask *taskJetResponse = 0;
1149
1150 if(iJETAN){
1151 taskJetResponse = AddTaskJetResponse("jets", "FASTJET", 0.4, kHighPtFilterMask, 0.15, 0);
1152 taskJetResponse = AddTaskJetResponse("jets", "FASTJET", 0.4, kHighPtFilterMask, 0.15, 1);
1153
1154 taskJetResponse = AddTaskJetResponse("jets", "UA1", 0.4, kHighPtFilterMask, 1., 0);
1155 taskJetResponse = AddTaskJetResponse("jets", "UA1", 0.4, kHighPtFilterMask, 1., 2);
1156 }
1157 if(iPWG4Cluster){
1158 taskJetResponse = AddTaskJetResponse("clusters", "ANTIKT", 0.4, kHighPtFilterMask, 0.15, 0);
1159 taskJetResponse = AddTaskJetResponse("clusters", "ANTIKT", 0.4, kHighPtFilterMask, 0.15, 1);
1160 }
1161 if (!taskJetResponse) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetResponse cannot run for this train conditions - EXCLUDED");
1162
1163 }
1164
1165 if(iPWG4JCORRAN){
1166 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJCORRANTask.C");
1167 AliJCORRANTask* corran = AddTaskJCORRAN(kDeltaAODJCORRANName.Data(),0);
1168 if(!corran)::Warning("AnalysisTrainPWG4Jets", "AliJCORRANTask cannot run for this train conditions - EXCLUDED");
1169 else{
1170 if(kDeltaAODJCORRANName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJCORRANName.Data());
1171 }
1172 }
1173
1174 if(iPWG4UE){
1175 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskUE.C");
1176 AliAnalysisTaskUE *taskUE = 0;
1177 if(iPWG4UE&1)taskUE = AddTaskUE();
1178 if(iPWG4UE&2){
1179 taskUE =AddTaskUE("jetsAOD_CDF04","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
1180 // taskUE =AddTaskUE("jetsAOD_CDF07","CDF", "LJ", "TRANSV","MSP");
1181 taskUE =AddTaskUE("jetsAOD_SISCONE04","CDF", "LJ", "TRANSV","MSP");
1182 // taskUE =AddTaskUE("jetsAOD_SISCONE07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
1183 taskUE =AddTaskUE("jetsAOD_ICDF","CDF","LJ","TRANSV","MSP");
1184 taskUE =AddTaskUE("jetsAOD_FASTKT04","CDF", "LJ", "TRANSV","MSP");
1185 // taskUE =AddTaskUE("jetsAOD_FASTKT07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
1186 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta05", "TRANSV","MSP");
1187 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta09", "TRANSV","MSP");
1188 }
1189
1190 if (!taskUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskUE cannot run for this train conditions - EXCLUDED");
1191 }
1192
1193 if(iPWG4LeadingUE){
1194 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskLeadingTrackUE.C");
1195 AliAnalysisTaskLeadingTrackUE *taskLeadingUE = AddTaskLeadingTrackUE(kUseMC);
1196 if (!taskLeadingUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTasLeadingTrackkUE cannot run for this train conditions - EXCLUDED");
1197 // taskLeadingUE->SetFilterBit(64);
1198 }
1199
1200
1201 if(iPWG4CorrectionsUE){
1202 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCorrectionsUE.C");
1203 AliAnalysisTaskCorrectionsUE *taskCorrectionsUE = 0;
1204 if(iPWG4CorrectionsUE&1)taskCorrectionsUE = AddTaskCorrectionsUE("jetsAOD_NONE","CDF","MP_eta05","TRANSV","MSP",kFALSE);
1205 if (!taskCorrectionsUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCorrectionsUE cannot run for this train conditions - EXCLUDED");
1206 }
1207
1208 if(iPWG4ThreeJets){
1209 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskThreeJets.C");
1210 AliAnalysisTaskThreeJets *taskThree = AddTaskThreeJets();
1211 if(!taskThree)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskThreets cannot run for this train conditions - EXCLUDED");
1212 }
1213 if(iPWG4QGSep){
1214 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskQGSep.C");
1215 AliAnalysisTaskQGSep *taskQGSep = AddTaskQGSep(kUseMC,iAODanalysis);
1216 if(!taskQGSep)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQGSep cannot run for this train conditions - EXCLUDED");
1217 }
1218
1219
1220 if(iPWG4Minijet){
1221 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskMinijet.C");
1222 AliAnalysisTaskMinijet *taskMini = AddTaskMinijet(-1,"esd",kUseMC,kGridDataSet);
1223 // if we ha highmult trigger add another task
1224 if(!taskMini)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskMinjet cannot run for this train conditions - EXCLUDED");
1225 }
1226
1227 AliAnalysisManager::SetCommonFileName("PWG4_HighPtQA.root");
1228 if(iPWG4PtQAMC){
1229 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQAMC.C");
1230 AliPWG4HighPtQAMC *taskQAMC = 0;
1231 if(kUseMC){
1232 if(iPWG4PtQAMC&1){
1233 taskQAMC = AddTaskPWG4HighPtQAMCAll(kGridDataSet.Data());
1234 }
1235 }
1236 if (!taskQAMC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQAMC cannot run for this train conditions - EXCLUDED");
1237 }
1238
1239 if(iPWG4PtTrackQA){
1240 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtTrackQA.C");
1241 if(iPWG4PtTrackQA&2)AddTaskPWG4HighPtTrackQAAll(kGridDataSet.Data(),kIsPbPb,iAODanalysis);
1242 else AddTaskPWG4HighPtTrackQAAllReduced(kGridDataSet.Data(),kIsPbPb,iAODanalysis);
1243 }
1244
1245 if(iPWG4PtQATPC){
1246 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQATPConly.C");
1247 AliPWG4HighPtQATPConly *taskQATPC = 0;
1248 if(iPWG4PtQATPC&1)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),1);
1249 if(iPWG4PtQATPC&2)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),2);
1250
1251 if (!taskQATPC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQATPC cannot run for this train conditions - EXCLUDED");
1252 }
1253
1254 if(iPWG4Cosmics){
1255 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4CosmicCandidates.C");
1256
1257 AliPWG4CosmicCandidates *taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(0);
1258 taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(1);
1259
1260 if (!taskPWG4CosmicCandidates) ::Warning("AnalysisTrainPWG4Jets", "AddTaskPWG4CosmicCandidates cannot run for this train conditions - EXCLUDED");
1261 }
1262
1263
1264 if(iPWG4PtSpectra){
1265 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtSpectra.C");
1266 AddTaskPWG4HighPtSpectraAll(kGridDataSet.Data(),kIsPbPb,iAODanalysis);
1267 }
1268
1269 if(iPWG4KMeans){
1270 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskKMeans.C");
1271 AliAnalysisTaskKMeans *taskKMeans = AddTaskKMeans();
1272 if (!taskKMeans) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskKMenans cannot run for this train conditions - EXCLUDED");
1273 }
1274
1275 if(iPWG4PartCorr){
1276 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPartCorr.C");
1277 AliAnalysisTaskParticleCorrelation *taskpartcorrPHOS = AddTaskPartCorr("AOD", "PHOS",kFALSE,kIsMC);
1278 if (!taskpartcorrPHOS) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation PHOS cannot run for this train conditions - EXCLUDED");
1279 AliAnalysisTaskParticleCorrelation *taskpartcorrEMCAL = AddTaskPartCorr("AOD", "EMCAL",kFALSE,kIsMC);
1280 if (!taskpartcorrEMCAL) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation EMCAL cannot run for this train conditions - EXCLUDED");
1281 if(kDeltaAODPartCorrName.Length()>0)mgr->RegisterExtraFile(kDeltaAODPartCorrName.Data());
1282 }
1283
1284 if(iPWG4CaloQA){
1285 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/QA/AddTaskCalorimeterQA.C");
1286 AliAnalysisTaskParticleCorrelation *taskcaloQA = AddTaskCalorimeterQA("ESD",kFALSE,kIsMC,kCaloQAOutputFileName.Data());
1287 if(!taskcaloQA)::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation QA cannot run - EXCLUDED");
1288 // if(kCaloQAOutputFileName.Length()>0)mgr->RegisterExtraFile(kCaloQAOutputFileName.Data());
1289 }
1290
1291 if(iPWG4JetCorr){
1292 // using namespace JetCorrelHD;
1293 TString cdir = gSystem->WorkingDirectory();
1294 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
1295 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCorrel.C");
1296 AliAnalysisTaskJetCorrel *taskjetcorr = AddTaskJetCorrel();
1297 gSystem->ChangeDirectory(cdir);
1298 if (!taskjetcorr) ::Warning("AnalysisTrainNew", "AliAnalysisTaskJetCorrel cannot run for this train conditions - EXCLUDED");
1299 }
1300
1301 if(iPWG4Tagged){
1302 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskTaggedPhotons.C");
1303 AliAnalysisTaskTaggedPhotons * taskTagged = AddTaskTaggedPhotons(kFALSE); // EMCAL
1304 taskTagged = AddTaskTaggedPhotons(kTRUE); // PHOS
1305 if (!taskTagged) ::Warning("AnalysisTrainNew", "AliAnalysisTaskTaggedPhotons cannot run for this train conditions - EXCLUDED");
1306 }
1307 if (iPWG4omega3pi) {
1308 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskomega3pi.C");
1309 AliAnalysisTaskOmegaPi0PiPi *taskomega3pi = AddTaskomega3pi();
1310 if (!taskomega3pi) ::Warning("AnalysisTrainNew", "AliAnalysisTaskomega3pi cannot run\
1311 for these train conditions - EXCLUDED");
1312 }
1313
1314 // PWG4 gamma conversion analysis
1315 if (iPWG4GammaConv) {
1316 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskGammaConversion.C");
1317 TString cdir = gSystem->WorkingDirectory();
1318 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
1319 // TString gcArguments = "-run-on-train -run-jet -run-chic -run-neutralmeson -run-cf";
1320 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
1321 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
1322 TString gcArguments = "-run-on-train -run-jet -run-omega-meson -use-own-xyz -run-neutralmeson -no-aod";
1323 // TString kGCAnalysisCutSelectionId="9003562000100310";
1324 // TString kGCAnalysisCutSelectionId="9003562000100312";
1325 // gcArguments.Append(Form(" -set-cut-selection %s ",kGCAnalysisCutSelectionId.Data()));
1326 if(!kIsMC)gcArguments += " -mc-off";
1327 AliAnalysisTaskGammaConversion * taskGammaConversion = AddTaskGammaConversion(gcArguments,mgr->GetCommonInputContainer());
1328 gSystem->ChangeDirectory(cdir);
1329 taskGammaConversion->SelectCollisionCandidates();
1330 if (!taskGammaConversion) ::Warning("AnalysisTrainNew", "AliAnalysisTaskGammaConversion cannot run for these train conditions - EXCLUDED");
1331 }
1332
1333 if (iPWG4CaloConv) {
1334 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCaloConv.C");
1335 AliAnalysisTaskCaloConv * taskCaloConv = AddTaskCaloConv();
1336 if (!taskCaloConv) ::Warning("AnalysisTrainNew", "AliAnalysisTaskCaloConv cannot run for these train conditions - EXCLUDED");
1337 }
1338
1339
1340
1341 //==========================================================================
1342 // FOR THE REST OF THE TASKS THE MACRO AddTaskXXX() is not yet implemented/
1343 // Run the analysis
1344 //
1345 if (kPluginUse) {
1346 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1347 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1348 }
1349
1350 if (mgr->InitAnalysis()) {
1351 mgr->PrintStatus();
1352 // if (kSaveTrain || strlen(config_file)) gSystem->ChangeDirectory(kTrainName);
1353 if (!strcmp(plugin_mode,"submit")&&smode=="GRID"){
1354 TString alien_workdir = gGrid->GetHomeDirectory();
1355 if (iAODanalysis) alien_workdir += "analysisAOD";
1356 else alien_workdir += "analysisESD";
1357 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s%s",kGridDataSet.Data(),kGridExtraAliendirLevel.Data());
1358 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1359 printf("=== AnalysisTrainPWG4Jets:: Registering jdl in the work directory alien://%s/%s, should be done by the manager! ===\n",
1360 alien_workdir.Data(),gridhandler->GetGridOutputDir());
1361
1362 TString dest;
1363 dest = Form("%s/%s/%s.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1364 if(AliAnalysisAlien::FileExists(dest.Data())){
1365 Printf("%s exist on grid removing...",dest.Data());
1366 gGrid->Rm(dest.Data());
1367 }
1368 Printf("%s copy ...",dest.Data());
1369 TFile::Cp(Form("file:%s.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
1370
1371
1372 TString dest;
1373 dest = Form("%s/%s/%s_merge.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1374 if(AliAnalysisAlien::FileExists(dest.Data())){
1375 Printf("%s exist on grid removing...",dest.Data());
1376 gGrid->Rm(dest.Data());
1377 }
1378 Printf("%s copy ...",dest.Data());
1379 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
1380
1381 dest = Form("%s/%s/%s_merge_final.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1382 if(AliAnalysisAlien::FileExists(dest.Data())){
1383 Printf("%s exist on grid removing...",dest.Data());
1384 gGrid->Rm(dest.Data());
1385 }
1386 Printf("%s copy ...",dest.Data());
1387 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
1388 }
1389 AliLog::SetGlobalLogLevel(AliLog::kError);
1390 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
1391 TFile * fM = TFile::Open("manager_local.root","RECREATE");
1392 mgr->Write();
1393 fM->Close();
1394 }
1395
1396 // grmpf, aliroot error handler overwrites root
1397 gErrorIgnoreLevel = kErrorIgnoreLevel;
1398 if(gErrorIgnoreLevel>3000) AliLog::SetGlobalLogLevel(AliLog::kFatal);
1399 StartAnalysis(smode, chain);
1400 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
1401 for(int i = 0;i < mgr->GetTopTasks()->GetEntries();i++){
1402 mgr->ProfileTask(i);
1403 }
1404 }
1405 if (!strcmp(plugin_mode, "offline")&&smode=="GRID"){
1406 // Offline mode path files
1407 // PatchJDL();
1408 // PatchAnalysisMacro();
1409 }
1410
1411 if (kSaveTrain && smode=="GRID") {
1412 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1413 TString alien_workdir = gGrid->GetHomeDirectory();
1414 if (iAODanalysis) alien_workdir += "analysisAOD";
1415 else alien_workdir += "analysisESD";
1416 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s%s",kGridDataSet.Data(),kGridExtraAliendirLevel.Data());
1417 // kGridOutdir = gridhandler->GetGridOutputDir();
1418 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
1419 alien_workdir.Data());
1420 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data())))
1421 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
1422 if (strcmp(plugin_mode, "test"))
1423 TFile::Cp(Form("file:%sConfig.C",kTrainName.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
1424 }
1425 }
1426}
1427
1428//______________________________________________________________________________
1429void StartAnalysis(const char *mode, TChain *chain) {
1430// Start analysis.
1431 Int_t imode = -1;
1432 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1433 if (!strcmp(mode, "LOCAL")) imode = 0;
1434 if (!strcmp(mode, "PROOF")) imode = 1;
1435 if (!strcmp(mode, "GRID")) imode = 2;
1436 switch (imode) {
1437 case 0:
1438 if (!chain) {
1439 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1440 return;
1441 }
1442 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
1443 return;
1444 case 1:
1445 if (!kProofDataSet.Length()) {
1446 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "kProofDataSet is empty");
1447 return;
1448 }
1449 mgr->StartAnalysis(mode, kProofDataSet, kProofEvents,kProofOffset);
1450 return;
1451 case 2:
1452 if (kPluginUse) {
1453 if (!mgr->GetGridHandler()) {
1454 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Grid plugin not initialized");
1455 return;
1456 }
1457 mgr->StartAnalysis("grid",chain,kNumberOfEvents);
1458 } else {
1459 if (!chain) {
1460 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1461 return;
1462 }
1463 // mgr->StartAnalysis(mode, chain);
1464 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
1465 }
1466 return;
1467 }
1468}
1469
1470//______________________________________________________________________________
1471void CheckModuleFlags(const char *mode) {
1472// Checks selected modules and insure compatibility
1473 Int_t imode = -1;
1474 if (!strcmp(mode, "LOCAL")) imode = 0;
1475 if (!strcmp(mode, "PROOF")) imode = 1;
1476 if (!strcmp(mode, "GRID")) imode = 2;
1477
1478
1479 if (kUseCPAR) {
1480 kPluginAliRootVersion = ""; // NO aliroot if we use CPAR
1481 }
1482
1483 if (imode==1) {
1484 if (!kUsePAR) {
1485 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
1486 kUsePAR = kTRUE;
1487 }
1488 }
1489 if (imode != 2) {
1490 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
1491 kPluginUse = kFALSE;
1492 }
1493
1494
1495 if(!kIsMC){
1496 // switch off anthin related to MC
1497 kUseMC = 0;
1498 kUseAODMC = 0;
1499 kUseTR = kFALSE;
1500 }
1501
1502 // Decide if we have PbPb
1503 if(kGridDataSet.CompareTo("LHC10h")==0||kGridDataSet.Contains("LHC10h")) {
1504 Printf("Using settings for Pb+Pb");
1505 kIsPbPb = true;
1506 }
1507
1508
1509
1510 if (iAODanalysis) {
1511 // AOD analysis
1512 if (kUseMC)
1513 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
1514 if (kUseAODTags)
1515 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
1516 kUseMC = kFALSE;
1517 kUseTR = kFALSE;
1518 kUseAODTags = kFALSE;
1519 if (iESDfilter)
1520 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
1521 iESDfilter = 0;
1522 if (iPhysicsSelection)
1523 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "Physics Selection disabled in analysis on AOD's");
1524 iPhysicsSelection = 0;
1525 if (!iAODhandler) {
1526 if (iJETAN)
1527 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
1528 iJETAN = 0;
1529 iDIJETAN = 0;
1530 }
1531 // Disable tasks that do not work yet on AOD data
1532 if(iPWG4JCORRAN)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 JCORRAN disabled in analysis on AOD's");
1533 iPWG4JCORRAN = 0;
1534 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
1535 iPWG4PtQAMC = 0;
1536 if( iPWG4PtQATPC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtTPC disabled in analysis on AOD's");
1537 iPWG4PtQATPC = 0;
1538 if( iPWG4Cosmics)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Comics disabled in analysis on AOD's");
1539 iPWG4Cosmics = 0;
1540
1541 if(iPWG4KMeans)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4KMeans disabled on AOD's");
1542 iPWG4KMeans = 0;
1543 if (iPWG4JetCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4Jetcorr disabled on AOD's");
1544 iPWG4JetCorr = 0;
1545 if (iPWG4PartCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
1546 iPWG4PartCorr = 0;
1547 if (iPWG4CaloQA)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4CaloQA disabled on AOD's");
1548 iPWG4CaloQA = 0;
1549 if (iPWG4Tagged)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4tagged disabled on AOD's");
1550 iPWG4Tagged = 0;
1551 if (iPWG4omega3pi)
1552 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
1553 iPWG4omega3pi = 0;
1554 if(iPWGPPQASym)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWGPP QA Sym disabled in analysis on AOD's");
1555 if (iPWG4GammaConv)::Info("AnalysisPWG4Jets.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's");
1556 iPWG4GammaConv = 0;
1557 iPWGPPQASym = 0;
1558 iCentralitySelection = 0;
1559 } else {
1560 // ESD analysis
1561
1562 if(kIsPbPb){
1563 iCentralitySelection = 1;
1564 }
1565
1566 if (!kUseMC){
1567 kUseTR = kFALSE;
1568
1569 if(kUseKinefilter)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Kine Filter disabled in analysis without MC");
1570 kUseKinefilter = kFALSE;
1571 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis without MC");
1572 iPWG4PtQAMC = 0;
1573 if( iPWG4CorrectionsUE)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 CorrectionsUE disabled in analysis without MC");
1574 iPWG4CorrectionsUE = 0;
1575 }
1576 if (iJETAN){
1577 iESDfilter=1;
1578 }
1579 if (!iESDfilter){
1580 kUseKinefilter = kFALSE;
1581 kUseMuonfilter = kFALSE;
1582 }
1583 if(!iJETAN){
1584 iPWG4JetSpectrum = iPWG4UE = iPWG4CorrectionsUE = iPWG4ThreeJets = iPWG4QGSep = iDIJETAN = 0;
1585 }
1586 }
1587 iPWG4JetTasks = iPWG4JetServices||iPWG4JetSpectrum||iPWG4UE||iPWG4LeadingUE||iPWG4PtQAMC||iPWG4PtTrackQA||iPWG4PtSpectra||iPWG4PtQATPC||iPWG4Cosmics||iPWG4ThreeJets||iPWG4QGSep||iPWG4JetChem||iPWG4Minijet||iPWG4Fragmentation;
1588 iPWG4PartCorrLibs = iPWG4PartCorr||iPWG4Tagged||iPWG4CaloQA;
1589 iPWG4GammaConvLib = iPWG4GammaConv||iPWG4CaloConv;
1590
1591
1592 iEMCUtilLibs = iPWG4JetTasks||iPWG4PartCorrLibs||iPWG4JCORRAN||iPWG4GammaConvLib||iJETAN;
1593 iJETANLib = iPWG4JetTasks||iJETAN||iDIJETAN;
1594
1595 if (iESDfilter) {iAODhandler=1;}
1596 if (kUseKinefilter && !kUseMC) kUseKinefilter = kFALSE;
1597 if (kUseAODTags && !iAODhandler) kUseAODTags = kFALSE;
1598
1599
1600
1601}
1602
1603//______________________________________________________________________________
1604Bool_t Connect(const char *mode) {
1605// Connect <username> to the back-end system.
1606 Int_t imode = -1;
1607 if (!strcmp(mode, "LOCAL")) imode = 0;
1608 if (!strcmp(mode, "PROOF")) imode = 1;
1609 if (!strcmp(mode, "GRID")) imode = 2;
1610 TString username = gSystem->Getenv("alien_API_USER");
1611 switch (imode) {
1612 case 0:
1613 break;
1614 case 1:
1615 if (!username.Length()) {
1616 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1617 1. Have called: alien-token-init <username>\n \
1618 2. Have called: >source /tmp/gclient_env_$UID");
1619 return kFALSE;
1620 }
1621 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
1622 username.Data(), kProofCluster.Data());
1623 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
1624// TProof::Open(Form("%s@%s:31093", username.Data(), kProofCluster.Data()));
1625 TProof::Open(Form("%s@%s", username.Data(), kProofCluster.Data()));
1626 if (!gProof) {
1627 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
1628 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
1629 return kFALSE;
1630 }
1631 if(kProofClearPackages)gProof->ClearPackages();
1632
1633 if(kProofSaveToAlien){
1634 TGrid::Connect("alien://");
1635 if (gGrid) {
1636 TString homedir = gGrid->GetHomeDirectory();
1637 TString workdir = homedir + kTrainName;
1638 if (!gGrid->Cd(workdir)) {
1639 gGrid->Cd(homedir);
1640 if (gGrid->Mkdir(workdir)) {
1641 gGrid->Cd(kTrainName);
1642 ::Info("AnalysisTrainPWG4Jets::Connect()", "Directory %s created", gGrid->Pwd());
1643 }
1644 }
1645 gGrid->Mkdir("proof_output");
1646 gGrid->Cd("proof_output");
1647 kProofOutdir = Form("alien://%s", gGrid->Pwd());
1648 }
1649 }
1650 break;
1651 case 2:
1652 if (!username.Length()) {
1653 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1654 1. Have called: alien-token-init <username>\n \
1655 2. Have called: >source /tmp/gclient_env_$UID");
1656 return kFALSE;
1657 }
1658 if (kPluginUse && !gSystem->Getenv("alien_CLOSE_SE")) {
1659 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode),
1660 "When using the AliEn plugin it is preferable to define the \
1661 variable alien_CLOSE_SE in your environment.");
1662 return kFALSE;
1663 }
1664 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to AliEn ...",
1665 username.Data());
1666 TGrid::Connect("alien://");
1667 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
1668 break;
1669 default:
1670 ::Error("AnalysisTrainPWG4Jets.C::Connect", "Unknown run mode: %s", mode);
1671 return kFALSE;
1672 }
1673 ::Info("AnalysisTrainPWG4Jets.C::Connect","Connected in %s mode", mode);
1674 return kTRUE;
1675}
1676
1677//______________________________________________________________________________
1678Bool_t LoadCommonLibraries(const char *mode)
1679{
1680 if (!gSystem->Getenv("ALICE_ROOT")) {
1681 ::Error("AnalysisTrainPWG4Jets.C", "Analysis train requires that ALICE_ROOT is set to pick up Configurations");
1682 return kFALSE;
1683 }
1684
1685 // Load common analysis libraries.
1686 Int_t imode = -1;
1687 if (!strcmp(mode, "LOCAL")) imode = 0;
1688 if (!strcmp(mode, "PROOF")) imode = 1;
1689 if (!strcmp(mode, "GRID")) imode = 2;
1690 Bool_t success = kTRUE;
1691 // ROOT libraries
1692 gSystem->Load("libTree.so");
1693 gSystem->Load("libGeom.so");
1694 gSystem->Load("libVMC.so");
1695 gSystem->Load("libPhysics.so");
1696 gSystem->Load("libMinuit.so");
1697
1698 // Load framework classes. Par option ignored here.
1699 switch (imode) {
1700 case 0:
1701 case 2:
1702 if (kUseCPAR) {
1703 success &= LoadLibrary("STEERBase", mode, kTRUE);
1704 success &= LoadLibrary("ESD", mode, kTRUE);
1705 success &= LoadLibrary("AOD", mode, kTRUE);
1706 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
1707 success &= LoadLibrary("OADB", mode, kTRUE);
1708 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
1709 success &= LoadLibrary("ROOTFILES", mode, kTRUE);
1710 // success &= LoadLibrary("EventMixing", mode,kTRUE);
1711 success &= LoadLibrary("CORRFW", mode, kTRUE);
1712 } else {
1713 success &= LoadLibrary("libSTEERBase.so", mode);
1714 success &= LoadLibrary("libESD.so", mode);
1715 success &= LoadLibrary("libAOD.so", mode);
1716 success &= LoadLibrary("libANALYSIS.so", mode);
1717 success &= LoadLibrary("libOADB.so", mode, kTRUE);
1718 success &= LoadLibrary("libANALYSISalice.so", mode);
1719 // success &= LoadLibrary("libEventMixing.so", mode);
1720 success &= LoadLibrary("libCORRFW.so", mode);
1721 gROOT->ProcessLine(".include $ALICE_ROOT/include");
1722 }
1723 break;
1724 case 1:
1725 Int_t ires = -1;
1726 if (kProofUseAFPAR && !gSystem->AccessPathName(kProofAFversion)) ires = gProof->UploadPackage(kProofAFversion);
1727 if (ires < 0) {
1728 success &= LoadLibrary("STEERBase", mode);
1729 success &= LoadLibrary("ESD", mode);
1730 success &= LoadLibrary("AOD", mode);
1731 success &= LoadLibrary("ANALYSIS", mode);
1732 success &= LoadLibrary("ANALYSISalice", mode);
1733 success &= LoadLibrary("EventMixing", mode);
1734 success &= LoadLibrary("CORRFW", mode);
1735 } else {
1736 ires = gProof->EnablePackage(kProofAFversion);
1737 if (ires<0) success = kFALSE;
1738 success &= LoadLibrary("CORRFW", mode);
1739 }
1740 break;
1741 default:
1742 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
1743 return kFALSE;
1744 }
1745 if (success) {
1746 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
1747 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
1748 gSystem->GetIncludePath());
1749 } else {
1750 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: FAILED");
1751 }
1752
1753 return success;
1754}
1755
1756//______________________________________________________________________________
1757Bool_t LoadAnalysisLibraries(const char *mode)
1758{
1759// Load common analysis libraries.
1760 Bool_t success = kTRUE;
1761 if (useTender) {
1762 if (!LoadLibrary("TENDER", mode, kTRUE) ||
1763 !LoadLibrary("TENDERSupplies", mode, kTRUE)) return kFALSE;
1764 }
1765 if (iESDfilter) {
1766 /*
1767 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
1768 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
1769 */
1770 }
1771 // JETAN
1772 if (iJETANLib) {
1773 // this part needs some rework in case we do not need the fastjed finders for processing
1774 if(iEMCUtilLibs){
1775 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
1776 !LoadLibrary("PHOSUtils", mode, kTRUE)) return kFALSE;
1777 }
1778 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
1779 if (!strcmp(mode, "PROOF")){
1780 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libCGAL.so\"\)", kTRUE);
1781 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libfastjet.so\"\)", kTRUE);
1782 // problem when loading siscone copiled with different gcc version??
1783 // gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libsiscone.so\"\)", kTRUE);
1784 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libSISConePlugin.so\"\)", kTRUE);
1785 }
1786 if(!kUsePAR){
1787 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
1788 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
1789 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
1790 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
1791 }
1792 else{
1793 // par files plus FASTJET needs some extra work... need to change
1794 // the loading sequence in the auto generated .C file
1795 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
1796 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
1797 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
1798 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
1799 }
1800 if (!LoadLibrary("FASTJETAN", mode, kTRUE)) return kFALSE;
1801 }
1802 if(iPWG4JetTasks){
1803 if (!LoadLibrary("PWG4JetTasks", mode, kTRUE)) return kFALSE;
1804 }
1805
1806 if(iPWGPPQASym){
1807 if (!LoadSource(Form("%s/PWGPP/AliAnalysisTaskQASym.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1808 }
1809 if(iPWG4TmpSourceSara){
1810 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
1811 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskEta.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1812 }
1813
1814 if (iPWG4PartCorrLibs) {
1815 if (!LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
1816 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
1817 }
1818 if(iPWG4JCORRAN){
1819 // PWG4 particle correlations
1820 if(!LoadLibrary("PWG4JCORRAN",mode,kTRUE))return kFALSE;
1821 }
1822 if (iPWG4JetCorr) {
1823 if (!LoadLibrary("PWG4JetCorrel", mode, kTRUE)) return kFALSE;
1824 }
1825 if (iPWG4omega3pi) {
1826 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
1827 }
1828 if (iPWG4GammaConvLib) {
1829 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
1830 }
1831
1832 ::Info("AnalysisTrainPWG4Jets.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
1833 return kTRUE;
1834}
1835
1836//______________________________________________________________________________
1837Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
1838{
1839// Load a module library in a given mode. Reports success.
1840 Int_t imode = -1;
1841 Int_t result;
1842 TString smodule(module);
1843 if (!strcmp(mode, "LOCAL")) imode = 0;
1844 if (!strcmp(mode, "PROOF")) imode = 1;
1845 if (!strcmp(mode, "GRID")) imode = 2;
1846 TString mod(module);
1847 if (!mod.Length()) {
1848 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Empty module name");
1849 return kFALSE;
1850 }
1851 // If a library is specified, just load it
1852 if (smodule.EndsWith(".so")) {
1853 mod.Remove(mod.Index(".so"));
1854 result = gSystem->Load(mod);
1855 if (result < 0) {
1856 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load library %s", module);
1857 return kFALSE;
1858 }
1859 if (rec) anaLibs += Form("%s.so ",mod.Data());
1860 if (rec) anaLibsExtra += Form("%s.so ",mod.Data());
1861 return kTRUE;
1862 }
1863 // Check if the library is already loaded
1864 if (strlen(gSystem->GetLibraries(Form("%s.so", module), "", kFALSE)) > 0)
1865 return kTRUE;
1866 switch (imode) {
1867 case 0:
1868 case 2:
1869 if (kUsePAR) {
1870 result = SetupPar(module);
1871 if (rec) anaPars += Form("%s.par ", module);
1872 } else {
1873 result = gSystem->Load(Form("lib%s.so", module));
1874 if (rec) anaLibs += Form("lib%s.so ", module);
1875 }
1876 break;
1877 case 1:
1878 if(!gSystem->AccessPathName(module)){
1879 ::Info("AnalysisTrainPWG4Jets.C::LoadLibrary", "Removing directory %s",module);
1880 gSystem->Exec(Form("rm -rf %s",module));
1881 }
1882 result = gProof->UploadPackage(module);
1883 if (result<0) {
1884 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
1885 if (result<0) {
1886 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
1887 return kFALSE;
1888 }
1889 }
1890 result = gProof->EnablePackage(module);
1891 break;
1892 default:
1893 return kFALSE;
1894 }
1895 if (result < 0) {
1896 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load module %s", module);
1897 return kFALSE;
1898 }
1899 return kTRUE;
1900}
1901
1902
1903
1904//______________________________________________________________________________
1905Bool_t LoadSource(const char *source, const char *mode, Bool_t rec=kFALSE)
1906{
1907// Load a module library in a given mode. Reports success.
1908 Int_t imode = -1;
1909 Int_t result = -1;
1910 if (!strcmp(mode, "LOCAL")) imode = 0;
1911 if (!strcmp(mode, "PROOF")) imode = 1;
1912 if (!strcmp(mode, "GRID")) imode = 2;
1913 TString ssource(source);
1914 TString basename = gSystem->BaseName(ssource.Data());
1915 if (!ssource.Length()) {
1916 ::Error("AnalysisTrainPWG4Jets.C::LoadSource", "Empty task name");
1917 return kFALSE;
1918 }
1919 // we have a source code so compile it
1920 if (ssource.EndsWith(".cxx")) {
1921 // need to copy it here other wise the path is also used on grid...
1922 ssource.Remove(ssource.Index(".cxx"));
1923 basename.Remove(basename.Index(".cxx"));
1924 Printf("LoadSources:: Copying... path %s{cxx,h}",ssource.Data());
1925 gSystem->Exec(Form("cp %s.cxx . ",ssource.Data()));
1926 gSystem->Exec(Form("cp %s.h . ",ssource.Data()));
1927 // Path to code
1928 // only needed for local compilation, in grid and proof mode
1929 // the task headers are uploaded
1930 // path.Remove(path.Index(gSystem->BaseName(path.Data())));
1931 // Printf("LoadSources:: Including path %s",path.Data());
1932 // if(path.Length()>0)gROOT->ProcessLine(Form(".include %s",path.Data()));
1933 Printf("LoadSources:: Loading... path %s",basename.Data());
1934 switch (imode) {
1935 case 0:
1936 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
1937 break;
1938 case 1:
1939 result = gProof->LoadMacro(Form("%s.cxx++g",basename.Data()));
1940 break;
1941 case 2:
1942 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
1943 if (rec){
1944 // what we want to compile
1945 anaSources += Form("%s.cxx ",basename.Data());
1946 // what we need as input...
1947 anaLibs += Form("%s.cxx %s.h ",basename.Data(),basename.Data());
1948 }
1949 break;
1950 default:
1951 return kFALSE;
1952 }
1953 }
1954 if (result < 0) {
1955 ::Error("AnalysisTrainPWG4Jets.C::LoadSources", "Could not load source %s", source);
1956 return kFALSE;
1957 }
1958 return kTRUE;
1959}
1960
1961
1962//______________________________________________________________________________
1963TChain *CreateChain(const char *mode, const char *plugin_mode)
1964{
1965// Create the input chain
1966 Int_t imode = -1;
1967 if (!strcmp(mode, "LOCAL")) imode = 0;
1968 if (!strcmp(mode, "PROOF")) imode = 1;
1969 if (!strcmp(mode, "GRID")) imode = 2;
1970 TChain *chain = NULL;
1971 // Local chain
1972 switch (imode) {
1973 case 0:
1974 if (iAODanalysis) {
1975 if (!kLocalXMLDataset.Length()) {
1976 // Local AOD
1977 chain = new TChain("aodTree");
1978 TString line;
1979 ifstream in;
1980 in.open(kLocalDataList.Data());
1981 Int_t ic = 0;
1982 while (in.good()) {
1983 in >> line;
1984 if (line.Length() == 0) continue;
1985 Printf("%d adding %s",ic,line.Data());
1986 chain->Add(line.Data());
1987 ic++;
1988 }
1989 } else {
1990 // Interactive AOD
1991 chain = CreateChainSingle(kLocalXMLDataset, "aodTree");
1992 }
1993 } else {
1994 if (!kLocalXMLDataset.Length()) {
1995 // Local ESD
1996 chain = new TChain("esdTree");
1997 TString line;
1998 ifstream in;
1999 in.open(kLocalDataList.Data());
2000 while (in.good()) {
2001 in >> line;
2002 if (line.Length() == 0) continue;
2003 cout << " line = " << line << endl;
2004 chain->Add(line.Data());
2005 }
2006 } else {
2007 // Interactive ESD
2008 chain = CreateChainSingle(kLocalXMLDataset, "esdTree");
2009 }
2010 }
2011 break;
2012 case 1:
2013 break;
2014 case 2:
2015 if (kPluginUse) {
2016// AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
2017// AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
2018 } else {
2019 TString treeName = "esdTree";
2020 if (iAODanalysis) treeName = "aodTree";
2021 chain = CreateChainSingle("wn.xml", treeName);
2022 }
2023 break;
2024 default:
2025 }
2026 if (chain && chain->GetNtrees()) return chain;
2027 return NULL;
2028}
2029
2030//______________________________________________________________________________
2031TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
2032{
2033 printf("*******************************\n");
2034 printf("*** Getting the ESD Chain ***\n");
2035 printf("*******************************\n");
2036 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
2037
2038 if (!myCollection) {
2039 ::Error("AnalysisTrainPWG4Jets.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
2040 return NULL ;
2041 }
2042
2043 TChain* chain = new TChain(treeName);
2044 myCollection->Reset() ;
2045 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
2046 chain->ls();
2047 return chain;
2048}
2049
2050//______________________________________________________________________________
2051Int_t SetupPar(char* pararchivename)
2052{
2053 if (!pararchivename || !strlen(pararchivename)) return -1;
2054 char processline[1024];
2055 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
2056 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
2057 ::Info("AnalysisTrainPWG4Jets.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
2058 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
2059 Form("%s.par",pararchivename));
2060 } else {
2061 ::Error("AnalysisTrainPWG4Jets.C::SetupPar", "Cannot find %s.par", pararchivename);
2062 return -1;
2063 }
2064 }
2065 if (kPluginUse && kSaveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, kTrainName.Data()));
2066 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
2067
2068 TString ocwd = gSystem->WorkingDirectory();
2069 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
2070
2071 // check for BUILD.sh and execute
2072 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
2073 printf("*******************************\n");
2074 printf("*** Building PAR archive ***\n");
2075 printf("*******************************\n");
2076 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
2077 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
2078 return -1;
2079 }
2080 }
2081
2082 // check for SETUP.C and execute
2083 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
2084 printf("*******************************\n");
2085 printf("*** Setup PAR archive ***\n");
2086 printf("*******************************\n");
2087 gROOT->Macro("PROOF-INF/SETUP.C");
2088 }
2089 if (!gSystem->ChangeDirectory(ocwd.Data())){
2090 Error("Change back directory",Form("Cannot change to %s",ocwd.Data()));
2091 return -1;
2092 }
2093 return 0;
2094}
2095
2096//______________________________________________________________________________
2097AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
2098{
2099// Check if user has a valid token, otherwise make one. This has limitations.
2100// One can always follow the standard procedure of calling alien-token-init then
2101// source /tmp/gclient_env_$UID in the current shell.
2102// if (!AliAnalysisGrid::CreateToken()) return NULL;
2103 AliAnalysisAlien *plugin = new AliAnalysisAlien();
2104// Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
2105 plugin->SetRunMode(plugin_mode);
2106 plugin->SetCheckCopy(kFALSE);
2107 if (kPluginUseProductionMode) plugin->SetProductionMode();
2108 plugin->SetJobTag(kJobTag);
2109 plugin->SetNtestFiles(1);
2110// plugin->SetPreferedSE("ALICE::NIHAM::File");
2111// Set versions of used packages
2112 plugin->SetAPIVersion("V1.1x");
2113 // plugin->SetAPIVersion("V1.0x");
2114// plugin->SetAPIVersion("V2.4");
2115 plugin->SetROOTVersion(kPluginRootVersion);
2116 plugin->SetAliROOTVersion(kPluginAliRootVersion);
2117// Declare input data to be processed.
2118// Method 1: Create automatically XML collections using alien 'find' command.
2119// Define production directory LFN
2120 plugin->SetGridDataDir(kGridDatadir.Data());
2121// Set data search pattern
2122 if (iAODanalysis) plugin->SetDataPattern(Form(" %s/*/*AliAOD.root",kGridPassPattern.Data()));
2123 else plugin->SetDataPattern(Form(" %s/*/*AliESDs.root",kGridPassPattern.Data()));
2124// ...then add run numbers to be considered
2125// plugin->SetRunRange(kGridRunRange[0], kGridRunRange[1]);
2126 for (Int_t i=kGridRunRange[0]; i<=kGridRunRange[1]; i++) {
2127 Printf("AnalysisTrainPWG4Jets Adding run number %s", Form(kGridRunPattern.Data(),i));
2128 plugin->AddRunNumber(Form(kGridRunPattern.Data(),i));
2129 }
2130
2131 if(kGridLocalRunList.Length()>0){
2132 ifstream in1;
2133 in1.open(kGridLocalRunList.Data());
2134 int iRun = 0;
2135 int icount = 0;
2136 Int_t nRun = 0;
2137 // just use run numbers, negatives will be excluded
2138 while(in1>>iRun){
2139 if(iRun>=0){
2140 if(iRun>=0&&nRun>=kGridOffsetRunFromList&&(nRun<kGridMaxRunsFromList)){
2141 Printf("AnalysisTrainPWG4Jets Adding run number from File %d: %s",nRun,Form(kGridRunPattern.Data(),iRun));
2142 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
2143
2144 }
2145 else{
2146 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d: %d",nRun, iRun);
2147 }
2148 nRun++;
2149 }
2150 else{
2151 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d: %d",nRun, iRun);
2152 }
2153 }
2154 }
2155// Method 2: Declare existing data files (raw collections, xml collections, root file)
2156// If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
2157// XML collections added via this method can be combined with the first method if
2158// the content is compatible (using or not tags)
2159// plugin->AddDataFile("tag.xml");
2160// plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
2161// Define alien work directory where all files will be copied. Relative to alien $HOME.
2162 TString alien_workdir = "";
2163
2164 if (iAODanalysis) alien_workdir += "analysisAOD";
2165 else alien_workdir += "analysisESD";
2166 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s%s",kGridDataSet.Data(),kGridExtraAliendirLevel.Data());
2167 plugin->SetGridWorkingDir(alien_workdir.Data());
2168
2169 // Declare alien output directory. Relative to working directory.
2170 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
2171 plugin->SetGridOutputDir(kGridOutdir);
2172
2173 // Add external packages
2174 plugin->AddExternalPackage("boost::v1_43_0");
2175 plugin->AddExternalPackage("cgal::v3.6");
2176 plugin->AddExternalPackage("fastjet::v2.4.2");
2177
2178
2179 // set extra libs before par file compilation
2180 anaLibs += kGridExtraFiles;
2181 anaLibs = anaLibs.Strip();
2182 Printf("anaLibs %s",anaLibs.Data());
2183 Printf("anaLibsExtra %s",anaLibsExtra.Data());
2184
2185 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs.Data());
2186 if (anaLibsExtra.Length()) plugin->SetAdditionalRootLibs(anaLibsExtra.Data());
2187
2188 TString ana_sources = "";
2189 TString ana_add = "";
2190 if (kUsePAR && anaPars.Length()) {
2191 printf("%s\n", anaPars.Data());
2192 TObjArray *arr;
2193 TObjString *objstr;
2194 arr = anaPars.Tokenize(" ");
2195 TIter next(arr);
2196 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
2197 delete arr;
2198 }
2199
2200// Declare the analysis source files names separated by blancs. To be compiled runtime
2201// using ACLiC on the worker nodes.
2202 ana_sources = anaSources.Strip();
2203// Declare all libraries (other than the default ones for the framework. These will be
2204// loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
2205
2206 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
2207 plugin->SetExecutableCommand(kPluginExecutableCommand.Data());
2208 // Declare the output file names separated by blancs.
2209 // (can be like: file.root or file.root@ALICE::Niham::File)
2210 plugin->SetMergeExcludes(kGridMergeExclude);
2211 plugin->SetMaxMergeFiles(kGridMaxMergeFiles);
2212 plugin->SetNrunsPerMaster(kGridRunsPerMaster);
2213 plugin->SetMergeViaJDL(kPluginMergeViaJDL);
2214 // Use fastread option
2215 plugin->SetFastReadOption(kPluginFastReadOption);
2216 // UseOverwrite mode
2217 plugin->SetOverwriteMode(kPluginOverwriteMode);
2218 // Optionally define the files to be archived.
2219 // plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
2220 plugin->SetOutputToRunNo(kPluginOutputToRunNumber); // write the output to subdirs named after run number
2221
2222 // Put default output files to archive
2223 TString listhists = "";
2224 TString listaods = "";
2225 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
2226 TIter next(mgr->GetOutputs());
2227 AliAnalysisDataContainer *output;
2228 while ((output=(AliAnalysisDataContainer*)next())) {
2229 const char *filename = output->GetFileName();
2230 if (!(strcmp(filename, "default"))) {
2231 if (!mgr->GetOutputEventHandler()) continue;
2232 filename = mgr->GetOutputEventHandler()->GetOutputFileName();
2233 if (listaods.Length()) listaods += " ";
2234 listaods += filename;
2235 } else {
2236 if(!listhists.Contains(filename)){
2237 if (listhists.Length()) listhists += " ";
2238 listhists += filename;
2239 }
2240 }
2241 }
2242
2243 if (mgr->GetExtraFiles().Length()) {
2244 if (listaods.Length()) listaods += " ";
2245 listaods += mgr->GetExtraFiles();
2246 }
2247
2248 // if we do not fill the aod we do not need to store it
2249 // kGridMergeExclude = listaods;
2250
2251 if(kSaveAOD>=0){
2252 TString outputFiles = "";
2253 outputFiles += mgr->GetExtraFiles();
2254 if (listhists.Length()) outputFiles += " ";
2255 outputFiles += listhists;
2256 plugin->SetDefaultOutputs(kFALSE);
2257 Printf("%s:%d Starting with the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
2258 // remove
2259 // no harm done when we try to remove something that is not there :)
2260 if(!(kSaveAOD&(1<<0))){
2261 outputFiles.ReplaceAll("AliAOD.root ","");
2262 listaods.ReplaceAll("AliAOD.root ","");
2263 }
2264 if(!(kSaveAOD&(1<<1))){
2265 if(kDeltaAODJetName.Length())outputFiles.ReplaceAll(kDeltaAODJetName.Data(),"");
2266 if(kDeltaAODJetName.Length())listaods.ReplaceAll(kDeltaAODJetName.Data(),"");
2267
2268 }
2269 if(!(kSaveAOD&(1<<2))){
2270 if(kDeltaAODPartCorrName.Length())outputFiles.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
2271 if(kDeltaAODPartCorrName.Length())listaods.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
2272 }
2273 if(!(kSaveAOD&(1<<3))){
2274 if(kDeltaAODJCORRANName.Length())outputFiles.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
2275 if(kDeltaAODJCORRANName.Length())listaods.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
2276 }
2277
2278 //
2279 plugin->SetDefaultOutputs(kFALSE);
2280 Printf("%s:%d Saving the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
2281 plugin->SetOutputFiles(outputFiles.Data());
2282 }
2283
2284 TString outputArchive;
2285 outputArchive = Form("log_archive.zip:std*@%s","disk=1");
2286 listaods.ReplaceAll(" ", ",");
2287 listhists.ReplaceAll(" ", ",");
2288 if (listhists.Length()){
2289 outputArchive += " ";
2290 outputArchive += "root_archive.zip:";
2291 outputArchive += listhists;
2292 if (listaods.Length()){
2293 outputArchive += ",";
2294 outputArchive += listaods;
2295 }
2296 outputArchive += Form("@%s", kGridOutputStorages.Data());
2297 }
2298 else{
2299
2300 if (listaods.Length()){
2301 // we have only aod'ish output
2302 outputArchive += " ";
2303 outputArchive += "root_archive.zip:";
2304 outputArchive += listaods;
2305 outputArchive += Form("@%s", kGridOutputStorages.Data());
2306 }
2307 else{
2308 // no other outputs than std..
2309 ::Fatal("AnalysisTrainPWG4Jets", "No task output !");
2310 }
2311 }
2312
2313 plugin->SetDefaultOutputs(kFALSE);
2314 plugin->SetOutputArchive(outputArchive);
2315
2316
2317 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
2318 plugin->SetAnalysisMacro(Form("%s.C", kTrainName.Data()));
2319 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
2320 plugin->SetSplitMaxInputFileNumber(kGridFilesPerJob);
2321 // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
2322 // plugin->SetMaxInitFailed(5);
2323 // Optionally resubmit threshold.
2324 // plugin->SetMasterResubmitThreshold(90);
2325 // Optionally set time to live (default 30000 sec)
2326 plugin->SetTTL(80000); // 22h...
2327 // Optionally set input format (default xml-single)
2328 plugin->SetInputFormat("xml-single");
2329 // Optionally modify the name of the generated JDL (default analysis.jdl)
2330 plugin->SetJDLName(Form("%s.jdl", kTrainName.Data()));
2331 // Optionally modify the executable name (default analysis.sh)
2332 plugin->SetExecutable(Form("%s.sh", kTrainName.Data()));
2333 // Optionally modify job price (default 1)
2334 plugin->SetPrice(1);
2335 // Optionally modify split mode (default 'se')
2336 plugin->SetSplitMode("se");
2337 return plugin;
2338}
2339
2340//______________________________________________________________________________
2341void WriteConfig()
2342{
2343// Write train configuration in a file. The file name has the format:
2344// train_[trainName]_ddMonthyyyy_time.C
2345 if (kUseDate) {
2346 gSystem->Exec("date +%d%b%Y_%Hh%M > date.tmp");
2347 ifstream fdate("date.tmp");
2348 if (!fdate.is_open()) {
2349 ::Error("AnalysisTrainPWG4Jets.C::Export","Could not generate file name");
2350 return;
2351 }
2352 const char date[64];
2353 fdate.getline(date,64);
2354 fdate.close();
2355 gSystem->Exec("rm date.tmp");
2356 kTrainName = Form("train_%s_%s", kTrainName.Data(), date);
2357 } else {
2358 kTrainName = Form("train_%s", kTrainName.Data());
2359 }
2360 TString cdir = gSystem->WorkingDirectory();
2361 gSystem->MakeDirectory(kTrainName);
2362 gSystem->ChangeDirectory(kTrainName);
2363 ofstream out;
2364 out.open(Form("%sConfig.C",kTrainName.Data()), ios::out);
2365 if (out.bad()) {
2366 ::Error("AnalysisTrainPWG4Jets.C::Export", "Cannot open ConfigTrain.C for writing");
2367 return;
2368 }
2369 out << "{" << endl;
2370 out << " kTrainName = " << "\"" << kTrainName.Data() << "\";" << endl;
2371 out << " kProofCluster = " << "\"" << kProofCluster.Data() << "\";" << endl;
2372 out << " kProofUseAFPAR = " << kProofUseAFPAR << ";" << endl;
2373 if (kProofUseAFPAR)
2374 out << " kProofAFversion = " << kProofAFversion.Data() << ";" << endl;
2375 out << " kProofDataSet = " << "\"" << kProofDataSet.Data() << "\";" << endl;
2376 out << " kPluginUse = " << kPluginUse << ";" << endl;
2377 out << " kUsePAR = " << kUsePAR << ";" << endl;
2378 out << " kUseCPAR = " << kUseCPAR << ";" << endl;
2379 out << " kPluginRootVersion = " << "\"" << kPluginRootVersion.Data() << "\";" << endl;
2380 out << " kPluginAliRootVersion = " << "\"" << kPluginAliRootVersion.Data() << "\";" << endl;
2381 out << " kGridDatadir = " << "\"" << kGridDatadir.Data() << "\";" << endl;
2382 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
2383 out << " kGridOutdir = " << "\"" << kGridOutdir.Data() << "\";" << endl;
2384 out << " kGridMaxMergeFiles = " << kGridMaxMergeFiles << ";" << endl;
2385 out << " kGridMergeExclude = " << "\"" << kGridMergeExclude.Data() << "\";" << endl;
2386 out << " kGridRunsPerMaster = " << kGridRunsPerMaster << ";" << endl;
2387 out << " kGridFilesPerJob = " << kGridFilesPerJob << ";" << endl;
2388 out << " kGridRunRange[0] = " << kGridRunRange[0] << ";" << endl;
2389 out << " kGridRunRange[1] = " << kGridRunRange[1] << ";" << endl;
2390 out << " kUseDebug = " << kUseDebug << ";" << endl;
2391 out << " kUseMC = " << kUseMC << ";" << endl;
2392 out << " kUseESDTags = " << kUseESDTags << ";" << endl;
2393 out << " kUseKinefilter = " << kUseKinefilter << ";" << endl;
2394 out << " kUseTR = " << kUseTR << ";" << endl;
2395 out << " kUseAODTags = " << kUseAODTags << ";" << endl;
2396 out << " kSaveTrain = " << "kFALSE;" << endl << endl;
2397 out << " // Analysis modules" << endl;
2398 out << " iAODanalysis = " << iAODanalysis << ";" << endl;
2399 out << " iAODhandler = " << iAODhandler << ";" << endl;
2400 out << " iESDfilter = " << iESDfilter << ";" << endl;
2401 out << " iJETAN = " << iJETAN << ";" << endl;
2402 out << "// Configuration fot the wagons" << endl;
2403 out << "}" << endl;
2404 ::Info("AnalysisTrainPWG4Jets.C::WriteConfig", "Train configuration wrote to file %s", Form("config_%s.C", kTrainName.Data()));
2405 gSystem->ChangeDirectory(cdir);
2406}
2407
2408//______________________________________________________________________________
2409Bool_t LoadConfig(const char *filename)
2410{
2411// Read train configuration from file
2412 if (gSystem->AccessPathName(filename)) {
2413 ::Error("AnalysisTrainPWG4Jets.C::LoadConfig", "Config file name not found");
2414 return kFALSE;
2415 }
2416 gROOT->ProcessLine(Form(".x %s", filename));
2417 ::Info("AnalysisTrainPWG4Jets.C::LoadConfig", "Train configuration loaded from file %s", filename);
2418 return kTRUE;
2419}
2420
2421Bool_t PatchJDL(){
2422 Printf(">>> Patching JDL");
2423 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
2424 AliAnalysisAlien* gridHandler = (AliAnalysisAlien*)mgr->GetGridHandler();
2425 TGridJDL *jdl = gridHandler->GetGridJDL();
2426 if(iJETAN)jdl->AddToPackages("fastjet","v2.4.0");
2427 gridHandler->WriteJDL(kFALSE);
2428 Printf("<<< Patching JDL");
2429 return kTRUE;
2430}
2431
2432Bool_t PatchAnalysisMacro(){
2433 Printf(">>> Patching AnalysisMacro");
2434 gSystem->Exec(Form("mv %s.C %s.C_tmp",kTrainName.Data(),kTrainName.Data()));
2435
2436 ifstream in1;
2437 in1.open(Form("%s.C_tmp", kTrainName.Data()));
2438 char cLine[250];
2439 TString st;
2440 while(in1.getline(cLine,250)){
2441 st += cLine;
2442 st += "\n";
2443 }
2444 Int_t index= -1;
2445 index = st.Index("gSystem->Load(\"libPhysics\");");
2446 index += strlen("gSystem->Load(\"libPhysics\");");
2447 /*
2448 TObjArray *arr;
2449 TObjString *objstr;
2450 arr = anaLibs.Tokenize(" ");
2451 TIter next(arr);
2452
2453 add += "\n\n // added by CKB \n";
2454 while ((objstr=(TObjString*)next())){
2455 if(objstr->GetString().Contains("PWG3"))continue;
2456 if(objstr->GetString().EndsWith(".so"))add += Form("gSystem->Load(\"%s\");\n",objstr->GetString().Data());
2457 }
2458 delete arr;
2459 */
2460 // add += Form("AliLog::SetGlobalLogLevel(%d);\n",AliLog::GetGlobalLogLevel());
2461 TString add = "";
2462
2463 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2464 add += "\n\n // added by CKB \n";
2465 if(kErrorIgnoreLevel>0)add += Form("gErrorIgnoreLevel = %d;\n",kErrorIgnoreLevel);
2466 add += "\n gSystem->AddIncludePath(\"./\"); \n";
2467 add += "\n gSystem->SetFPEMask(); \n";
2468
2469
2470 if(gGrid&&kPluginAliRootVersion.Length()==0){
2471 /*
2472 add += "\n // Dirty hack for TRD reference data \n";
2473 add += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2474 add += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2475 add += "\"); \n";
2476 */
2477 }
2478
2479 add += "// BKC \n\n";
2480 st.Insert(index,add.Data());
2481
2482 if(kUseDebug){
2483 // st.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
2484 }
2485
2486 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
2487 index = st.Index("gSystem->AddIncludePath(\"-I$"); // uncommen $ALICE_ROOT include for par files
2488 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2489 st.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2490 }
2491
2492 if(AliLog::GetGlobalLogLevel()==AliLog::kFatal){
2493 index = st.Index("AliLog::SetGlobal"); // ncomment setting of log level, do my own
2494 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2495 st.Insert(index,"AliLog::SetGlobalLogLevel(AliLog::kFatal);// CKB \n // CKB comment out for own setting \n //");
2496 }
2497
2498 ofstream out;
2499 out.open(Form("%s.C", kTrainName.Data()));
2500 if (out.bad()) {
2501 return kFALSE;
2502 }
2503 out << st << endl;
2504 Printf("<<< Patching AnalysisMacro");
2505
2506
2507
2508
2509
2510 Printf(">>> Patching Merge Macro");
2511 gSystem->Exec(Form("mv %s_merge.C %s_merge.C_tmp",kTrainName.Data(),kTrainName.Data()));
2512
2513 ifstream in2;
2514 in2.open(Form("%s_merge.C_tmp", kTrainName.Data()));
2515 TString st2;
2516 while(in2.getline(cLine,250)){
2517 st2 += cLine;
2518 st2 += "\n";
2519 }
2520 index = st2.Index("gSystem->Load(\"libPhysics\");");
2521 index += strlen("gSystem->Load(\"libPhysics\");");
2522 TString add2 = "";
2523 add2 += "\n gSystem->AddIncludePath(\"./\"); \n";
2524 if(gGrid&&kPluginAliRootVersion.Length()==0){
2525 /*
2526 add2 += "\n // Dirty hack for TRD reference data \n";
2527 add2 += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2528 add2 += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2529 add2 += "\"); \n";
2530 */
2531 }
2532 add2 += "// BKC \n\n";
2533 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2534 st2.Insert(index,add.Data());
2535
2536
2537 if(kUseDebug){
2538 // st2.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
2539 }
2540
2541 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
2542 index = st2.Index("gSystem->AddIncludePath(\"-I$"); // uncomment $ALICE_ROOT include for par files
2543 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2544 st2.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2545 }
2546
2547 // do not exclude the extra files from merign, this is done explicitly in this train script
2548 // index = st2.Index("mergeExcludes +="); // uncommen $ALICE_ROOT include for par files
2549 // if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2550 // st2.Insert(index,"// CKB comment out, handled explicitly by the train macro \n //");
2551
2552
2553 ofstream out2;
2554 out2.open(Form("%s_merge.C", kTrainName.Data()));
2555 if (out2.bad()) {
2556 return kFALSE;
2557 }
2558 out2 << st2 << endl;
2559 Printf("<<< Patching Merging Macro");
2560
2561
2562
2563 return kTRUE;
2564
2565}