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1//===================== ANALYSIS TRAIN =========================================
2// To use: copy this macro to your work directory, modify the global part to match
3// your needs, then run root.
4// root[0] .L AnalysisTrain.C
5// Grid full mode as below (other modes: test, offline, submit, terminate)
6// root[1] AnalysisTrainPWG-244Jets("grid", "full")
7// CAF mode (requires root v5-23-02 + aliroot v4-16-Rev08)
8// root[2] AnalysisTrainPWG4Jets("proof")
9// Local mode requires AliESds.root or AliAOD.root in ./data directory
10// root[3] AnalysisTrainPWG4Jets("local")
11// In proof and grid modes, a token is needed and sourcing the produced environment file.
12//
13// If 'saveTrain' flag is set, the train will generate a directory name and run
14// in this directory. A configuration file 'ConfigTrain.C' will be generated.
15// One can replay at any time the train via:
16// root[1] AnalysisTrainPWG4Jets(ana_mode, plugin_mode, "train_default_<date>/ConfigTrain.C")
17
18// For Usage with fastjet run in "offline" first and then "submit"
19// jdl and analysismacro are automatically patched after "offline" mode
20
21// =============================================================================
22// ### General Steering variables
23// =============================================================================
24//== general setup variables
25TString kTrainName = "testAnalysis"; // *CHANGE ME* (no blancs or special characters)
26TString kJobTag = "PWG4 Jet Tasks analysis train configured"; // *CHANGE ME*
27
28// Usage of par files ONLY in grid mode and ONLY if the code is not available
29// in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
30// To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
31// AliRoot.
32Bool_t kUsePAR = kFALSE; // use par files for extra libs
33Bool_t kUseCPAR = kFALSE; // use par files for common libs
34Bool_t kFillAOD = kFALSE; // switch of AOD filling for on the fly analysis
35Int_t kSaveAOD = 8; // Bit switch 1 = Full AOD 2 = Jet AOD , 4 = PartCorr, 8 = JCORRAN
36//== general input and output variables
37
38Int_t iAODanalysis = 1; // Analysis on input AOD's
39Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
40Int_t iCentralitySelection = 0; // Use the centrality
41Int_t iESDfilter = 0; // ESD to AOD filter (barrel + muon tracks)
42Int_t iPhysicsSelection = 1; // ESD to AOD filter (barrel + muon tracks)
43UInt_t iPhysicsSelectionFlag = 0; // set by pyshics selection and passed to the task, kMB, kUserDefined etc
44Bool_t useTender = kFALSE; // use tender wagon
45Bool_t kUseKinefilter = kFALSE; // use Kinematics filter
46Bool_t kUseMuonfilter = kFALSE; // use Kinematics filter
47TString kCommonOutputFileName = "PWG4_JetTasksOutput.root";
48TString kCaloQAOutputFileName = "PWG4_CaloQAOutput.root";
49
50
51//== general process variables
52
53// ### Other flags to steer the analysis
54//==============================================================================
55Bool_t kSkipTerminate = kTRUE; // Do not call Teminate
56Bool_t kUseDate = kFALSE; // use date in train name
57Bool_t kUseDebug = kTRUE; // activate debugging
58Int_t kErrorIgnoreLevel = -1; // takes the errror print level from .rootrc
59// From TError.h:
60// const Int_t kUnset = -1;
61// const Int_t kPrint = 0;
62// const Int_t kInfo = 1000;
63// const Int_t kWarning = 2000;
64// const Int_t kError = 3000;
65// const Int_t kBreak = 4000;
66// const Int_t kSysError = 5000;
67// const Int_t kFatal = 6000;
68Int_t kUseSysInfo = 0; // activate debugging
69Long64_t kNumberOfEvents = 1234567890; // number of events to process from the chain
70Bool_t kUseMC = kTRUE; // use MC info
71Bool_t kIsMC = kTRUE; // is MC info, if false it overwrites Use(AOD)MC
72Bool_t kUseAODMC = kTRUE; // use MC infA
73Bool_t kUseESDTags = kFALSE; // use ESD tags for selection
74Bool_t kUseTR = kFALSE; // use track references
75Bool_t kUseAODTags = kFALSE; // use AOD tags
76Bool_t kSaveTrain = kFALSE; // save train configuration as:
77Bool_t kIsPbPb = kFALSE; // Pb+Pb
78
79
80// ### Analysis modules to be included. Some may not be yet fully implemented.
81//==============================================================================
82Int_t iJETAN = 1; // Jet analysis (PWG4) // 1 write standard 2 write non-standard jets, 3 wrtie both
83Int_t iDIJETAN = 1;
84Int_t iJETANLib = 1;
85Int_t iPWG1QASym = 0; // Eva's QA task compiled on the fly...
86Int_t iPWG4FastEmbedding = 0; // Generate non-standard AOD for embedding
87Int_t iPWG4JetTasks = 0; // all jet tasks flag for lib laoding
88Int_t iPWG4JetServices = 0; // jet spectrum analysis
89Int_t iPWG4JetSpectrum = 0; // jet spectrum analysis
90Int_t iPWG4JCORRAN = 0; // JCORRAN module
91Int_t iPWG4UE = 0; // Underlying Event analysis
92Int_t iPWG4LeadingUE = 0; // Underlying Event analysis
93Int_t iPWG4CorrectionsUE = 0; // Underlying Event analysis
94Int_t iPWG4TmpSourceSara = 0; // Underlying Event analysis not in svn
95Int_t iPWG4Fragmentation = 0; // Official Fragmentation
96Int_t iPWG4JetChem = 0; // Jet chemistry
97Int_t iPWG4PtQAMC = 0; // Marta's QA tasks
98Int_t iPWG4PtSpectra = 0; // Marta's QA tasks
99Int_t iPWG4PtQATPC = 0; // Marta's QA tasks
100Int_t iPWG4Cosmics = 0; // Marta's Cosmics Taks
101Int_t iPWG4ThreeJets = 0; // Sona's thrust task
102Int_t iPWG4QGSep = 0; // Sona's QG Separation task
103Int_t iPWG4Minijet = 0; // Eva's Mini Jet Task cluster task
104Int_t iPWG4KMeans = 0; // Andreas' KMeans task
105Int_t iPWG4Cluster = 0; // CKB cluster task
106Int_t iEMCUtilLibs = 0; // Flag to satisfy dependence on EMC utils
107Int_t iPWG4PartCorrLibs = 0; // Gustavo's part corr analysis
108Int_t iPWG4PartCorr = 0; // Gustavo's part corr analysis
109Int_t iPWG4CaloQA = 0; // Gustavo's part corr analysis
110Int_t iPWG4JetCorr = 0; // Paul's jet corr analysis
111Int_t iPWG4Tagged = 0; // Gustavo's part corr analysis
112Int_t iPWG4omega3pi = 0; // Omega to 3 pi analysis (PWG4)
113Int_t iPWG4GammaConvLib = 0; // Gamma Conversio
114Int_t iPWG4GammaConv = 0; // Gamma Conversio
115Int_t iPWG4CaloConv = 0; // Gamma Conversio
116Int_t kHighPtFilterMask = 32; // change depending on the used AOD Filter
117TString kDeltaAODJetName = "AliAOD.Jets.root";
118TString kDeltaAODJCORRANName = "AliAOD.JCORRAN.root";
119TString kDeltaAODPartCorrName = "AliAOD.PartCorr.root";
120TString kFastEmbeddingAOD = "emb/AliAOD.root";
121
122//==============================================================================
123// ### PROOF Steering varibales
124//==============================================================================
125//== proof setup variables
126TString kProofCluster = "alicecaf.cern.ch";
127Bool_t kProofUseAFPAR = kFALSE; // use AF special par file
128TString kProofAFversion = "AF-v4-17";
129//== proof input and output variables
130TString kProofDataSet = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
131Bool_t kProofSaveToAlien = kFALSE; // save proof outputs in AliEn train_[trainName]_ddMonthyyyy_time.C
132TString kProofOutdir = "";
133Bool_t kProofClearPackages = kFALSE;
134Int_t kProofEvents = 10000;
135Int_t kProofOffset = 0;
136//== proof process variables
137
138
139//==============================================================================
140// ### Grid plugin Steering varibiables
141//==============================================================================
142//== grid plugin setup variables
143Bool_t kPluginUse = kTRUE; // do not change
144Bool_t kPluginUseProductionMode = kFALSE; // use the plugin in production mode
145TString kPluginRootVersion = "v5-27-06b"; // *CHANGE ME IF MORE RECENT IN GRID*
146TString kPluginAliRootVersion = "v4-19-15-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
147Bool_t kPluginMergeViaJDL = kTRUE; // merge via JDL
148Bool_t kPluginFastReadOption = kFALSE; // use xrootd tweaks
149Bool_t kPluginOverwriteMode = kTRUE; // overwrite existing collections
150Int_t kPluginOutputToRunNumber = 1; // write the output to subdirs named after run number
151// TString kPluginExecutableCommand = "root -b -q";
152TString kPluginExecutableCommand = "source /Users/kleinb/setup_32bit_aliroot_trunk_clean_root_trunk.sh; alienroot -b -q ";
153
154// == grid plugin input and output variables
155TString kGridDatadir = "/alice/sim/PDC_08b/LHC09a1/AOD/";
156Int_t kGridMaxRunsFromList = 999999999;
157Int_t kGridOffsetRunFromList = 0; // skip the first n runs from the list
158TString kGridLocalRunList = "";
159TString kGridOutdir = ""; // AliEn output directory. If blank will become output_<kTrainName>
160TString kGridDataSet = ""; // sub working directory not to confuse different run xmls
161Int_t kGridRunRange[2] = {0, -1}; // Set the run range
162TString kGridRunPattern = "%03d"; // important for leading zeroes!!
163TString kGridPassPattern = "";
164TString kGridExtraFiles = ""; // files that will be added to the input list in the JDL...
165Int_t kGridMaxMergeFiles = 12; // Number of files merged in a chunk grid run range
166TString kGridMergeExclude = "AliAOD.root"; // Files that should not be merged
167TString kGridOutputStorages = "disk=2"; // Make replicas on the storages
168// == grid process variables
169Int_t kGridRunsPerMaster = 100; // Number of runs per master job
170Int_t kGridFilesPerJob = 100; // Maximum number of files per job (gives size of AOD)
171
172//==============================================================================
173// ### Local Steering variables
174//==============================================================================
175//== local setup variables
176//== local input and output variables
177TString kLocalXMLDataset = ""; // Change local xml dataset for local interactive analysis
178TString kLocalDataList = "local_deltaaod.txt"; // Change local xml dataset for local interactive analysis
179// == local process variables
180
181TString kPluginMode;
182
183
184// Temporaries.
185TString anaPars = "";
186TString anaLibs = "";
187TString anaLibsExtra = "";
188TString anaSources = "";
189// Function signatures
190class AliAnalysisAlien;
191
192//______________________________________________________________________________
193void AnalysisTrainPWG4Jets(const char *analysis_mode="local",
194 const char *plugin_mode="",
195 const char *config_file="",Int_t iOffset = 0,Int_t iTotal = 0)
196{
197// Main analysis train macro. If a configuration file is provided, all parameters
198// are taken from there but may be altered by CheckModuleFlags.
199
200 // these flag may be needed by the config file
201 kPluginMode = plugin_mode;
202
203 if (strlen(config_file) && !LoadConfig(config_file)) return;
204 if(iTotal>0)kGridMaxRunsFromList = iTotal; // overwrites the settings from config file
205 if(iOffset)kGridOffsetRunFromList = iOffset;
206 if(iOffset)kProofOffset = iOffset;
207
208
209 TString smode(analysis_mode);
210 smode.ToUpper();
211 if (kSaveTrain)WriteConfig();
212 // Check compatibility of selected modules
213 CheckModuleFlags(smode);
214 // gROOT->ProcessLine(".trace");
215
216 printf("==================================================================\n");
217 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", kTrainName.Data(),smode.Data());
218 printf("==================================================================\n");
219 printf("= Configuring analysis train for: =\n");
220 if (iAODanalysis) printf("= AOD analysis =\n");
221 else printf("= ESD analysis =\n");
222 if (iPhysicsSelection) printf("= Physics selection =\n");
223 if(iCentralitySelection)printf("= Centrality selection =\n");
224 if (useTender) printf("= Using tender =\n");
225 if (iESDfilter) printf("= ESD filter =\n");
226 if (iJETAN) printf("= Jet analysis =\n");
227 printf("==================================================================\n");
228
229 char *printMask = ":: %20s %10d\n";
230 printf(printMask,"Fill AOD",(UInt_t)kFillAOD);
231 printf(printMask,"Save AOD", (UInt_t)kSaveAOD);
232 printf(printMask,"MC truth", (UInt_t)kUseMC);
233 printf(printMask,"KINE filter", (UInt_t)kUseKinefilter);
234 printf(printMask,"track refs", (UInt_t)kUseTR);
235 printf(printMask,"tags", (UInt_t)kUseESDTags);
236 printf(printMask,"AOD tags", (UInt_t)kUseAODTags);
237 printf(printMask,"debugging", (UInt_t)kUseDebug);
238 printf(printMask,"PAR files", (UInt_t)kUsePAR);
239 printf(printMask,"AliEn plugin", (UInt_t)kPluginUse);
240 printf(printMask,"PWG1 QA sym", iPWG1QASym);
241 printf(printMask,"PWG4 Source Sara",iPWG4TmpSourceSara);
242 printf(printMask,"PWG4 Fragmentation",iPWG4Fragmentation);
243 printf(printMask,"PWG4 Jet Chem",iPWG4JetChem);
244 printf(printMask,"PWG4 Jet tasks",iPWG4JetTasks);
245 printf(printMask,"PWG4 Jet Services",iPWG4JetServices);
246 printf(printMask,"PWG4 Jet Spectrum",iPWG4JetSpectrum);
247 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
248 printf(printMask,"PWG4 UE",iPWG4UE);
249 printf(printMask,"PWG4 Leading UE",iPWG4LeadingUE);
250 printf(printMask,"PWG4 Corrections UE",iPWG4CorrectionsUE);
251 printf(printMask,"PWG4 Pt QA MC",iPWG4PtQAMC);
252 printf(printMask,"PWG4 Pt Spectra",iPWG4PtSpectra);
253 printf(printMask,"PWG4 Pt QA TPC",iPWG4PtQATPC);
254 printf(printMask,"PWG4 Cosmics",iPWG4Cosmics);
255 printf(printMask,"PWG4 Three Jets",iPWG4ThreeJets);
256 printf(printMask,"PWG4 QGSep",iPWG4QGSep);
257 printf(printMask,"PWG4 Minijet",iPWG4Minijet);
258 printf(printMask,"PWG4 KMeans",iPWG4KMeans);
259 printf(printMask,"PWG4 Cluster",iPWG4Cluster);
260 printf(printMask,"PWG4 Part Corr",iPWG4PartCorr);
261 printf(printMask,"PWG4 Calo QA",iPWG4CaloQA);
262 printf(printMask,"PWG4 Jet Corr",iPWG4JetCorr);
263 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
264 printf(printMask,"PWG4 Tagged",iPWG4Tagged);
265 printf(printMask,"PWG4 omega to 3 pi ",iPWG4omega3pi);
266 printf(printMask,"PWG4 Gamma Conv",iPWG4GammaConv);
267 printf(printMask,"PWG4 Calo Conv",iPWG4CaloConv);
268 printf(printMask,"HighPt FilterMask",kHighPtFilterMask);
269
270 //==========================================================================
271 // Connect to back-end system
272 if (!Connect(smode)) {
273 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
274 return;
275 }
276
277 // Load common libraries and set include path
278 if (!LoadCommonLibraries(smode)) {
279 ::Error("AnalysisTrain", "Could not load common libraries");
280 return;
281 }
282
283
284
285 // Make the analysis manager and connect event handlers
286 AliAnalysisManager *mgr = new AliAnalysisManager("PWG4Train", "pwg4 mini train");
287 if (kCommonOutputFileName.Length()>0)mgr->SetCommonFileName(kCommonOutputFileName.Data());
288 if (kProofSaveToAlien) mgr->SetSpecialOutputLocation(kProofOutdir);
289 mgr->SetNSysInfo(0);
290 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
291 if (kUseSysInfo)mgr->SetNSysInfo(kUseSysInfo);
292 mgr->SetSkipTerminate(kSkipTerminate);
293
294 // Load analysis specific libraries
295 if (!LoadAnalysisLibraries(smode)) {
296 ::Error("AnalysisTrain", "Could not load analysis libraries");
297 return;
298 }
299
300 // Create input handler (input container created automatically)
301 if (iAODanalysis) {
302 // AOD input handler
303 AliAODInputHandler *aodH = new AliAODInputHandler();
304 mgr->SetInputEventHandler(aodH);
305 // if (iPWG4JetTasks) aodH->AddFriend(Form("deltas/%s",kDeltaAODJetName.Data()));
306 // if (iPWG4PartCorr) aodH->AddFriend(Form("deltas/%s"kDeltaAODJetName.Data()));
307 } else {
308 // ESD input handler
309 AliESDInputHandler *esdHandler = new AliESDInputHandler();
310 if (kUseESDTags) esdHandler->SetReadTags();
311 esdHandler->SetReadFriends(kFALSE);
312 mgr->SetInputEventHandler(esdHandler);
313 // if(iPWG4PtQATPC&& !kTrainName.Contains("pass5"))esdHandler->SetActiveBranches("ESDfriend");
314
315 }
316
317 // Monte Carlo handler
318 if (kUseMC && !iAODanalysis) {
319 AliMCEventHandler* mcHandler = new AliMCEventHandler();
320 mgr->SetMCtruthEventHandler(mcHandler);
321 mcHandler->SetReadTR(kUseTR);
322 }
323 // AOD output container, created automatically when setting an AOD handler
324 if (iAODhandler) {
325 // AOD output handler
326 AliAODHandler* aodHandler = new AliAODHandler();
327 aodHandler->SetOutputFileName("AliAOD.root");
328 aodHandler->SetFillAODforRun(kFillAOD);
329 //
330 mgr->SetOutputEventHandler(aodHandler);
331 AliAnalysisDataContainer * cout_aod = mgr->GetCommonOutputContainer();
332 cout_aod->SetSpecialOutput();
333 }
334 // Debugging if needed
335
336 if (kUseDebug){
337 mgr->SetDebugLevel(3);
338 }
339 if(kUseSysInfo>0){
340 mgr->RegisterExtraFile("syswatch.root");
341 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
342 kGridMergeExclude += "syswatch.root";
343 }
344 else{
345 AliLog::SetGlobalLogLevel(AliLog::kError);
346 }
347
348
349 //==========================================================================
350 // Create the chain. In this example it is created only from ALIEN files but
351 // can be done to work in batch or grid mode as well.
352 TChain *chain = CreateChain(smode, plugin_mode);
353
354 //==========================================================================
355 // Load the tasks configuration macros for all wagons. These files are supposed now to be
356 // in the current workdir, but in AliEn they will be in the file catalog,
357 // mapped from AliRoot and pecified in the jdl input list.
358
359 // For now connection to top input container and common AOD output container
360 // is done in this macro, but in future these containers will be connected
361 // from each task configuration macro.
362
363 //
364 // Tender and supplies. Needs to be called for every event.
365 //
366 if (useTender) {
367 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/TenderSupplies/AddTaskTender.C");
368 AliAnalysisTaskSE *tender = AddTaskTender(kTRUE);
369 // tender->SelectCollisionCandidates();
370 tender->SetDebugLevel(2);
371 }
372
373
374
375 if(iPhysicsSelection && !iAODanalysis){
376 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
377 Int_t iTriggerHIC = 0;
378 Bool_t rejectBkg = true;
379 if(kIsPbPb){
380 iTriggerHIC = 2;
381 rejectBkg = false; // for the moment...
382 }
383 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kIsMC,rejectBkg);
384 iPhysicsSelectionFlag = AliVEvent::kMB;
385 }
386
387 if(iCentralitySelection){
388
389 // has to run before AOD filter
390 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCentralitySelection.C");
391 const char* file1="$ALICE_ROOT/ANALYSIS/macros/AliCentralityBy1D_137161_v5.root";
392 const char* file2="$ALICE_ROOT/ANALYSIS/macros/AliCentralityBy1D_137366_v3.root";
393 AliCentralitySelectionTask *taskC = AddTaskCentralitySelection(file1,file2);
394 if (!taskC) ::Warning("AnalysisTrainPWG4Jets", "AliCentralitySelectionTask cannot run for this train conditions - EXCLUDED");
395 }
396
397 if (iESDfilter && !iAODanalysis) {
398 // ESD filter task configuration.
399 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskESDFilterPWG4Train.C");
400 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilter(kUseKinefilter,kUseMuonfilter);
401 taskesdfilter->SetEnableFillAOD(kTRUE);
402
403 if(kIsMC){
404 mgr->RegisterExtraFile("pyxsec_hists.root");
405 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
406 kGridMergeExclude += "pyxsec_hists.root";
407
408 }
409 }
410
411 // AOD tags
412 if (kUseAODTags) {
413 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
414 mgr->AddTask(tagTask);
415 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
416 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
417 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
418 mgr->ConnectOutput(tagTask, 1, coutTags);
419 }
420
421 if (iPWG4FastEmbedding) {
422 Printf("adding fast embedding task\n");
423 gROOT->LoadMacro("src/AliAnalysisTaskFastEmbedding.cxx++g");
424 gROOT->LoadMacro("macros/AddTaskFastEmbedding.C");
425 AliAnalysisTask *taskEmbedding = AddTaskFastEmbedding(kFastEmbeddingAOD);
426 }
427
428 // Jet analysis
429 if (iJETAN) {
430 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJets.C");
431 AliAnalysisTaskJets *taskjets = 0;
432 if(iJETAN&1){
433 /*
434 taskjets = AddTaskJets(kHighPtFilterMask);
435 taskjets->SetName("StandardJets");
436 taskjets->SetNonStdBranch("");
437 */
438 }
439 if(iJETAN&2){
440 // Set only few jet finders backgroudn subtraction w an wo
441
442 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,0.15,0); // low p_T no background subtraction
443 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
444 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,0.15,1); // low p_T background subtraction
445 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
446 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1,0); // high p_T no abackground subtraction
447 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
448 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1,1); // high p_T abackground subtraction
449 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
450 taskjets = AddTaskJets("AOD","UA1",0.2,kHighPtFilterMask,0.15,0); // low p_T no background subtraction
451 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
452 taskjets = AddTaskJets("AOD","UA1",0.2,kHighPtFilterMask,0.15,1); // low p_T background subtraction
453 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
454 taskjets = AddTaskJets("AOD","UA1",0.2,kHighPtFilterMask,1,0); // high p_T no abackground subtraction
455 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
456 taskjets = AddTaskJets("AOD","UA1",0.2,kHighPtFilterMask,1,1); // high p_T abackground subtraction
457 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
458
459 /*
460 UInt_t selection = 0;
461 if(!kFillAOD){
462 selection = 0xffffff&~(1<<13)&~(1<<5)&~(1<<6); // switch OFF DA and all R = 0.7 to save processing time
463 selection &= ~(1<<1)&~(1<<2)&~(1<<4)&~(1<<6)&~(1<<8)&~(1<<10)&~(1<<12);
464 }
465 else {
466 selection = 0xffffff&~(1<<13)&~(1<<5)&~(1<<6); // switch OFF DA and all R = 0.7 to save processing time;
467 selection &= ~(1<<1)&~(1<<2)&~(1<<4)&~(1<<6)&~(1<<8)&~(1<<10)&~(1<<12);
468 }
469 AddTaskJetsDelta(kDeltaAODJetName.Data(),kHighPtFilterMask,kUseAODMC,selection);
470 AddTaskJets("AOD","FASTKT",0.2,kHighPtFilterMask);
471 */
472 }
473 if (!taskjets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
474 if(kDeltaAODJetName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJetName.Data());
475 }
476
477 if (iPWG4FastEmbedding && iJETAN) {
478 AliAnalysisTaskJets *taskEmbJets = AddTaskJets("AODextra", "FASTKT", 0.4, kHighPtFilterMask);
479 taskEmbJets->ReadAODFromOutput();
480 taskEmbJets = AddTaskJets("AODextraonly", "FASTKT", 0.4, kHighPtFilterMask);
481 taskEmbJets->ReadAODFromOutput();
482 }
483
484 if(iPWG4Cluster){
485 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCluster.C");
486 AliAnalysisTaskJetCluster *taskCl = 0;
487 Float_t fCenUp = 0;
488 Float_t fCenLo = 0;
489 if(kIsPbPb&&!kIsMC){
490 fCenLo = 0;
491 fCenUp = 80;
492 }
493 if(iPWG4Cluster&1){
494
495 if(kIsPbPb){
496
497 /*
498 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.2,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
499 taskCl->SetBackgroundCalc(kTRUE);
500 taskCl->SetGhostEtamax(0.9);
501 taskCl->SetCentralityCut(fCenLo,fCenUp);
502 */
503
504 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
505 taskCl->SetBackgroundCalc(kTRUE);
506 taskCl->SetCentralityCut(fCenLo,fCenUp);
507 taskCl->SetGhostEtamax(0.9);
508
509 taskCl = AddTaskJetCluster("AOD","",256,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
510 taskCl->SetBackgroundCalc(kTRUE);
511 taskCl->SetCentralityCut(fCenLo,fCenUp);
512 taskCl->SetGhostEtamax(0.9);
513
514
515 /*
516 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.2,0,1, kDeltaAODJetName.Data()); // this one is for the background and random jets
517 taskCl->SetBackgroundCalc(kTRUE);
518 taskCl->SetGhostEtamax(0.9);
519 taskCl->SetCentralityCut(fCenLo,fCenUp);
520 */
521
522 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),1.); // this one is for the background and random jets
523 taskCl->SetBackgroundCalc(kTRUE);
524 taskCl->SetCentralityCut(fCenLo,fCenUp);
525 taskCl->SetGhostEtamax(0.9);
526
527
528 }
529 else{
530 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1,kDeltaAODJetName.Data()); // this one is for the background jets
531 taskCl->SetBackgroundCalc(kTRUE);
532 }
533
534 /*
535 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.2,0,1,kDeltaAODJetName.Data());
536 taskCl->SetCentralityCut(fCenLo,fCenUp);
537 taskCl->SetBackgroundBranch("jeteventbackground_clustersAOD_KT04");
538 */
539
540
541 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15);
542 taskCl->SetCentralityCut(fCenLo,fCenUp);
543 if(kDeltaAODJetName.Length()==0)taskCl->SetJetTriggerPtCut(40.);//
544 taskCl->SetBackgroundBranch("jeteventbackground_clustersAOD_KT04_B1_Filter00144_Cut0150_Skip00");
545
546 // taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.2,0,1,kDeltaAODJetName.Data(),0.15);
547 // taskCl->SetCentralityCut(fCenLo,fCenUp);
548 // taskCl->SetBackgroundBranch("jeteventbackground_clustersAOD_KT04_B1_Filter00144_Cut0150_Skip00");
549
550
551 taskCl = AddTaskJetCluster("AOD","",256,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15);
552 taskCl->SetCentralityCut(fCenLo,fCenUp);
553 taskCl->SetBackgroundBranch("jeteventbackground_clustersAOD_KT04_B1_Filter00256_Cut0150_Skip00");
554
555
556
557 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),1.0);
558 taskCl->SetCentralityCut(fCenLo,fCenUp);
559 taskCl->SetBackgroundBranch("jeteventbackground_clustersAOD_KT04_B1_Filter00144_Cut01000_Skip00");
560
561 // taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.2,0,1,kDeltaAODJetName.Data(),1.0);
562 // taskCl->SetCentralityCut(fCenLo,fCenUp);
563 // taskCl->SetBackgroundBranch("jeteventbackground_clustersAOD_KT04_B1_Filter00144_Cut01000_Skip00");
564
565
566
567 if(kUseAODMC){
568 if(kIsPbPb){
569 // calcluate the backgrounds first, but only R = 0.4
570 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1,kDeltaAODJetName.Data()); // this one is for the background random jets
571 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1,kDeltaAODJetName.Data()); // this one is for the background random jets
572
573
574
575 // taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.2,0,1,kDeltaAODJetName.Data());
576 // taskCl->SetBackgroundBranch("jeteventbackground_clustersAODMC_KT04");
577 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data());
578 taskCl->SetBackgroundBranch("jeteventbackground_clustersAODMC_KT04");
579 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.2,0,1,kDeltaAODJetName.Data());
580 taskCl->SetBackgroundBranch("jeteventbackground_clustersAODMC2_KT04");
581 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data());
582 taskCl->SetBackgroundBranch("jeteventbackground_clustersAODMC2_KT04");
583 }
584 else{
585 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1,kDeltaAODJetName.Data()); // this one is for the background jets
586 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1,kDeltaAODJetName.Data()); // this one is for the background jets
587
588
589 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.2,0,1,kDeltaAODJetName.Data());
590 taskCl->SetBackgroundBranch("jeteventbackground_clustersAODMC_KT06");
591 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data());
592 taskCl->SetBackgroundBranch("jeteventbackground_clustersAODMC_KT06");
593 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.2,0,1,kDeltaAODJetName.Data());
594 taskCl->SetBackgroundBranch("jeteventbackground_clustersAODMC2_KT06");
595 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data());
596 taskCl->SetBackgroundBranch("jeteventbackground_clustersAODMC2_KT06");
597
598
599
600 }
601 }
602
603 if (!taskCl) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCluster cannot run for this train conditions - EXCLUDED");
604 }
605 if(iPWG4Cluster&2){
606 UInt_t selection = 0;
607 if(!iAODanalysis) selection = 0xffffff;
608 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
609 if(kIsPbPb){
610 selection&=~(1<<2); // exluded R = .04 already the dafault
611 selection&=~(1<<4); // exluded R = .04 already the dafault
612 }
613 else{
614 selection&=~(1<<6); // exluded R = .04 already the dafault
615 }
616 AddTaskJetClusterDelta(kHighPtFilterMask,kUseAODMC,iPhysicsSelectionFlag,"KT",selection);
617 }
618 if(iPWG4Cluster&4){
619 UInt_t selection = 0;
620 if(!iAODanalysis){
621 selection = 0xffffff;
622 selection &= ~(1<<1)&~(1<<3)&~(1<<5)&~(1<<7)&~(1<<9);
623 }
624 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
625 selection&=~(1<<2); // exluded R = .04 already the dafault
626 selection&=~(1<<4); // exluded R = .04 already the dafault
627 AddTaskJetClusterDelta(kHighPtFilterMask,kUseAODMC,iPhysicsSelectionFlag,"ANTIKT",selection);
628 // AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"ANTIKT",0.4,0,1);
629
630 }
631 }
632
633 if (iDIJETAN) {
634 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskDiJets.C");
635 AliAnalysisTaskDiJets *taskdijets = 0;
636 if(iDIJETAN&1)taskdijets = AddTaskDiJets();
637 if (!taskdijets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
638 if(iDIJETAN&2){
639 taskdijets = AddTaskDiJets("jetsAOD_CDF07");
640 taskdijets = AddTaskDiJets("jetsAOD_DA07");
641 taskdijets = AddTaskDiJets("jetsAOD_FASTJET07");
642 taskdijets = AddTaskDiJets("jetsAOD_FASTKT07");
643 taskdijets = AddTaskDiJets("jetsAOD_SISCONE07");
644 taskdijets = AddTaskDiJets("jetsAOD_UA107");
645 }
646 }
647
648 if(iPWG1QASym){
649 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskQAsym.C");
650 AliAnalysisTaskQASym *taskQASym = AddTaskQAsym(-1);
651 if (!taskQASym) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQASym cannot run for this train conditions - EXCLUDED");
652 }
653
654
655
656 if(iPWG4TmpSourceSara){
657 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskEta.C");
658 AliAnalysisTaskEta *taskEta = AddTaskEta();
659 if (!taskEta) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskEta cannot run for this train conditions - EXCLUDED");
660 }
661
662 if(iPWG4Fragmentation){
663 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFragmentationFunction.C");
664 AliAnalysisTaskFragmentationFunction *taskFrag = 0;
665 if(kUseAODMC){
666 taskFrag = AddTaskFragmentationFunction(1<<1,kHighPtFilterMask);
667 taskFrag = AddTaskFragmentationFunction(1<<2,kHighPtFilterMask);
668 // taskFrag = AddTaskFragmentationFunction(1<<3,kHighPtFilterMask);
669 taskFrag = AddTaskFragmentationFunction(1<<5,kHighPtFilterMask);
670 taskFrag = AddTaskFragmentationFunction(1<<11); // w/o acceptance cuts
671 taskFrag = AddTaskFragmentationFunction(1<<12); // with acceptance cuts
672 // anti-kt
673 taskFrag = AddTaskFragmentationFunction(1<<21); // w/o acceptance cuts
674 taskFrag = AddTaskFragmentationFunction(1<<22); // with acceptance cuts
675
676 }
677 else{
678 taskFrag = AddTaskFragmentationFunction(1<<0,kHighPtFilterMask);
679 taskFrag = AddTaskFragmentationFunction(1<<10,kHighPtFilterMask);
680 taskFrag = AddTaskFragmentationFunction(1<<20,kHighPtFilterMask);
681 }
682
683 if (!taskFrag) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskFragmentationFunction cannot run for this train conditions - EXCLUDED");
684 }
685
686
687 if(iPWG4JetChem){
688 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetChem.C");
689 AliAnalysisTask *taskChem = AddTaskJetChem(kHighPtFilterMask);
690 if (!taskChem) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetChem cannot run for this train conditions - EXCLUDED");
691 }
692
693
694 if(iPWG4JetServices){
695 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetServices.C");
696 AliAnalysisTaskJetServices *taskjetServ = 0;
697 taskjetServ = AddTaskJetServices();
698 if (!taskjetServ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetServices cannot run for this train conditions - EXCLUDED");
699 if(kGridRunRange[0]>0)taskjetServ->SetRunRange(kGridRunRange[0],kGridRunRange[1]);
700 else taskjetServ->SetRunRange(110000,160000);
701 taskjetServ->SetMCData(kIsMC);
702 taskjetServ->SetUsePhysicsSelection((Bool_t)iPhysicsSelection);
703 taskjetServ->SetPhysicsSelectionFlag(iPhysicsSelectionFlag); //
704 taskjetServ->SetDebugLevel(0);
705 taskjetServ->SetNonStdFile(kDeltaAODJetName.Data());
706 if(kIsPbPb){
707 taskjetServ->SetFilterAODCollisions(kTRUE);
708 taskjetServ->SetZVertexCut(30.);
709 }
710 if(iAODanalysis){
711 taskjetServ->SetAODInput(kTRUE);
712 }
713 }
714
715 if(iPWG4JetSpectrum){
716 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetSpectrum2.C");
717 AliAnalysisTaskJetSpectrum2 *taskjetSpectrum = 0;
718
719 TString cBack;
720 if(kIsPbPb){
721 cBack = "jeteventbackground_clustersAOD_KT04";
722 }
723 else{
724 cBack = "jeteventbackground_clustersAOD_KT06";
725 }
726
727 if(iPWG4JetSpectrum&1){
728 // add the dfault jet finders with R = 0.4
729 UInt_t iSelection = 0xfffff;
730
731 // taskJetSpectrum = AddTaskJetSpectrum2Delta(kHighPtFilterMask,kUseAODMC,iPhysicsSelectionFlag,iSelection,0,kTRUE,cBack.Data()); // bug fixed 10.11.10
732 taskJetSpectrum = AddTaskJetSpectrum2("clustersAOD_ANTIKT04","",cBack.Data(),kHighPtFilterMask,iPhysicsSelectionFlag,0,kTRUE,1);
733 if(iAODanalysis){
734 taskJetSpectrum->SetDebugLevel(1);
735 taskJetSpectrum->SetAODJetInput(kTRUE);
736 taskJetSpectrum->SetAODTrackInput(kTRUE);
737 taskJetSpectrum->SetUseGlobalSelection(kFALSE);
738 }
739 }
740 if(iPWG4JetSpectrum&2){
741 if(kIsMC){
742 UInt_t eventSelection = AliAnalysisHelperJetTasks::kIsPileUp|AliAnalysisHelperJetTasks::kVertexIn;
743 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
744 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC_FASTJET04","",kHighPtFilterMask,iPhysicsSelectionFlag,eventSelection);
745 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC2_FASTJET04","",kHighPtFilterMask,iPhysicsSelectionFlag,eventSelection);
746
747 eventSelection = AliAnalysisHelperJetTasks::kIsCosmic|AliAnalysisHelperJetTasks::kVertexIn;
748 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
749 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC_FASTJET04","",kHighPtFilterMask,iPhysicsSelectionFlag,eventSelection);
750
751 eventSelection = AliAnalysisHelperJetTasks::kNone;
752 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC2_FASTJET04","",kHighPtFilterMask,iPhysicsSelectionFlag,eventSelection);
753 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC_FASTJET04","",kHighPtFilterMask,iPhysicsSelectionFlag,eventSelection);
754 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC_FASTJET04","",kHighPtFilterMask,iPhysicsSelectionFlag,eventSelection);
755 }
756 else{
757 UInt_t eventSelection = AliAnalysisHelperJetTasks::kIsPileUp|AliAnalysisHelperJetTasks::kVertexIn;
758 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
759 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","","",kHighPtFilterMask,iPhysicsSelectionFlag,eventSelection);
760 eventSelection = AliAnalysisHelperJetTasks::kIsCosmic|AliAnalysisHelperJetTasks::kVertexIn;
761 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
762 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","","",kHighPtFilterMask,iPhysicsSelectionFlag,eventSelection);
763 }
764 }
765 if(iPWG4JetSpectrum&4){
766 // central events backgrounds... just for testing...
767 if(kIsPbPb){
768 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","",cBack.Data(),kHighPtFilterMask,iPhysicsSelectionFlag,0,kTRUE,1,1);
769 taskjetSpectrum->SetDebugLevel(10);
770 }
771 }
772 if(iPWG4JetSpectrum&8){
773 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTKT04", "","jeteventbackground_clustersAOD_KT04",kHighPtFilterMask,iPhysicsSelectionFlag,0,kFALSE,0,0);
774 taskjetSpectrum = AddTaskJetSpectrum2("jetsAODextra_FASTKT04", "","jeteventbackground_clustersAOD_KT04",kHighPtFilterMask,iPhysicsSelectionFlag,0,kFALSE,0,0);
775 taskjetSpectrum = AddTaskJetSpectrum2("jetsAODextraonly_FASTKT04","","jeteventbackground_clustersAOD_KT04",kHighPtFilterMask,iPhysicsSelectionFlag,0,kFALSE,0,0);
776 }
777 if (!taskjetSpectrum) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetSpectrum2 cannot run for this train conditions - EXCLUDED");
778
779 }
780
781
782 if(iPWG4JCORRAN){
783 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJCORRANTask.C");
784 AliJCORRANTask* corran = AddTaskJCORRAN(kDeltaAODJCORRANName.Data(),0);
785 if(!corran)::Warning("AnalysisTrainPWG4Jets", "AliJCORRANTask cannot run for this train conditions - EXCLUDED");
786 else{
787 if(kDeltaAODJCORRANName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJCORRANName.Data());
788 }
789 }
790
791 if(iPWG4UE){
792 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskUE.C");
793 AliAnalysisTaskUE *taskUE = 0;
794 if(iPWG4UE&1)taskUE = AddTaskUE();
795 if(iPWG4UE&2){
796 taskUE =AddTaskUE("jetsAOD_CDF04","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
797 // taskUE =AddTaskUE("jetsAOD_CDF07","CDF", "LJ", "TRANSV","MSP");
798 taskUE =AddTaskUE("jetsAOD_SISCONE04","CDF", "LJ", "TRANSV","MSP");
799 // taskUE =AddTaskUE("jetsAOD_SISCONE07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
800 taskUE =AddTaskUE("jetsAOD_ICDF","CDF","LJ","TRANSV","MSP");
801 taskUE =AddTaskUE("jetsAOD_FASTKT04","CDF", "LJ", "TRANSV","MSP");
802 // taskUE =AddTaskUE("jetsAOD_FASTKT07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
803 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta05", "TRANSV","MSP");
804 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta09", "TRANSV","MSP");
805 }
806
807 if (!taskUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskUE cannot run for this train conditions - EXCLUDED");
808 }
809
810 if(iPWG4LeadingUE){
811 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskLeadingTrackUE.C");
812 AliAnalysisTaskLeadingTrackUE *taskLeadingUE = AddTaskLeadingTrackUE(kUseMC);
813 if (!taskLeadingUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTasLeadingTrackkUE cannot run for this train conditions - EXCLUDED");
814 // taskLeadingUE->SetFilterBit(64);
815 }
816
817
818 if(iPWG4CorrectionsUE){
819 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCorrectionsUE.C");
820 AliAnalysisTaskCorrectionsUE *taskCorrectionsUE = 0;
821 if(iPWG4CorrectionsUE&1)taskCorrectionsUE = AddTaskCorrectionsUE("jetsAOD_NONE","CDF","MP_eta05","TRANSV","MSP",kFALSE);
822 if (!taskCorrectionsUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCorrectionsUE cannot run for this train conditions - EXCLUDED");
823 }
824
825 if(iPWG4ThreeJets){
826 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskThreeJets.C");
827 AliAnalysisTaskThreeJets *taskThree = AddTaskThreeJets();
828 if(!taskThree)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskThreets cannot run for this train conditions - EXCLUDED");
829 }
830 if(iPWG4QGSep){
831 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskQGSep.C");
832 AliAnalysisTaskQGSep *taskQGSep = AddTaskQGSep(kUseMC,iAODanalysis);
833 if(!taskQGSep)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQGSep cannot run for this train conditions - EXCLUDED");
834 }
835
836
837 if(iPWG4Minijet){
838 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskMinijet.C");
839 AliAnalysisTaskMinijet *taskMini = AddTaskMinijet(-1,"esd",kUseMC,kGridDataSet);
840 // if we ha highmult trigger add another task
841 if(!taskMini)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskMinjet cannot run for this train conditions - EXCLUDED");
842 }
843
844
845 if(iPWG4PtQAMC){
846 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQAMC.C");
847 AliPWG4HighPtQAMC *taskQAMC = 0;
848 if(kUseMC){
849 if(iPWG4PtQAMC&1){
850 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),0);
851 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),1);
852 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),2);
853 }
854 }
855 if (!taskQAMC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQAMC cannot run for this train conditions - EXCLUDED");
856 }
857
858 if(iPWG4PtQATPC){
859 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQATPConly.C");
860 AliPWG4HighPtQATPConly *taskQATPC = 0;
861 if(iPWG4PtQATPC&1)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),1);
862 if(iPWG4PtQATPC&2)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),2);
863
864 if (!taskQATPC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQATPC cannot run for this train conditions - EXCLUDED");
865 }
866
867 if(iPWG4Cosmics){
868 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4CosmicCandidates.C");
869
870 AliPWG4CosmicCandidates *taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(0);
871 taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(1);
872
873 if (!taskPWG4CosmicCandidates) ::Warning("AnalysisTrainPWG4Jets", "AddTaskPWG4CosmicCandidates cannot run for this train conditions - EXCLUDED");
874 }
875
876
877 if(iPWG4PtSpectra){
878 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtSpectra.C");
879 AliPWG4HighPtSpectra *taskPtSpectra = AddTaskPWG4HighPtSpectra(kGridDataSet.Data());
880 if (!taskPtSpectra) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskPtSpectra cannot run for this train conditions - EXCLUDED");
881 }
882 if(iPWG4KMeans){
883 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskKMeans.C");
884 AliAnalysisTaskKMeans *taskKMeans = AddTaskKMeans();
885 if (!taskKMeans) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskKMenans cannot run for this train conditions - EXCLUDED");
886 }
887
888 if(iPWG4PartCorr){
889 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPartCorr.C");
890 AliAnalysisTaskParticleCorrelation *taskpartcorrPHOS = AddTaskPartCorr("AOD", "PHOS",kFALSE,kIsMC);
891 if (!taskpartcorrPHOS) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation PHOS cannot run for this train conditions - EXCLUDED");
892 AliAnalysisTaskParticleCorrelation *taskpartcorrEMCAL = AddTaskPartCorr("AOD", "EMCAL",kFALSE,kIsMC);
893 if (!taskpartcorrEMCAL) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation EMCAL cannot run for this train conditions - EXCLUDED");
894 if(kDeltaAODPartCorrName.Length()>0)mgr->RegisterExtraFile(kDeltaAODPartCorrName.Data());
895 }
896
897 if(iPWG4CaloQA){
898 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/QA/AddTaskCalorimeterQA.C");
899 AliAnalysisTaskParticleCorrelation *taskcaloQA = AddTaskCalorimeterQA("ESD",kFALSE,kIsMC,kCaloQAOutputFileName.Data());
900 if(!taskcaloQA)::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation QA cannot run - EXCLUDED");
901 // if(kCaloQAOutputFileName.Length()>0)mgr->RegisterExtraFile(kCaloQAOutputFileName.Data());
902 }
903
904 if(iPWG4JetCorr){
905 // using namespace JetCorrelHD;
906 TString cdir = gSystem->WorkingDirectory();
907 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
908 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCorrel.C");
909 AliAnalysisTaskJetCorrel *taskjetcorr = AddTaskJetCorrel();
910 gSystem->ChangeDirectory(cdir);
911 if (!taskjetcorr) ::Warning("AnalysisTrainNew", "AliAnalysisTaskJetCorrel cannot run for this train conditions - EXCLUDED");
912 }
913
914 if(iPWG4Tagged){
915 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskTaggedPhotons.C");
916 AliAnalysisTaskTaggedPhotons * taskTagged = AddTaskTaggedPhotons(kFALSE); // EMCAL
917 taskTagged = AddTaskTaggedPhotons(kTRUE); // PHOS
918 if (!taskTagged) ::Warning("AnalysisTrainNew", "AliAnalysisTaskTaggedPhotons cannot run for this train conditions - EXCLUDED");
919 }
920 if (iPWG4omega3pi) {
921 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskomega3pi.C");
922 AliAnalysisTaskOmegaPi0PiPi *taskomega3pi = AddTaskomega3pi();
923 if (!taskomega3pi) ::Warning("AnalysisTrainNew", "AliAnalysisTaskomega3pi cannot run\
924 for these train conditions - EXCLUDED");
925 }
926
927 // PWG4 gamma conversion analysis
928 if (iPWG4GammaConv) {
929 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskGammaConversion.C");
930 TString cdir = gSystem->WorkingDirectory();
931 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
932 // TString gcArguments = "-run-on-train -run-jet -run-chic -run-neutralmeson -run-cf";
933 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
934 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
935 TString gcArguments = "-run-on-train -run-jet -run-omega-meson -use-own-xyz -run-neutralmeson -no-aod";
936 // TString kGCAnalysisCutSelectionId="9003562000100310";
937 // TString kGCAnalysisCutSelectionId="9003562000100312";
938 // gcArguments.Append(Form(" -set-cut-selection %s ",kGCAnalysisCutSelectionId.Data()));
939 if(!kIsMC)gcArguments += " -mc-off";
940 AliAnalysisTaskGammaConversion * taskGammaConversion = AddTaskGammaConversion(gcArguments,mgr->GetCommonInputContainer());
941 gSystem->ChangeDirectory(cdir);
942 taskGammaConversion->SelectCollisionCandidates();
943 if (!taskGammaConversion) ::Warning("AnalysisTrainNew", "AliAnalysisTaskGammaConversion cannot run for these train conditions - EXCLUDED");
944 }
945
946 if (iPWG4CaloConv) {
947 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCaloConv.C");
948 AliAnalysisTaskCaloConv * taskCaloConv = AddTaskCaloConv();
949 if (!taskCaloConv) ::Warning("AnalysisTrainNew", "AliAnalysisTaskCaloConv cannot run for these train conditions - EXCLUDED");
950 }
951
952
953
954 //==========================================================================
955 // FOR THE REST OF THE TASKS THE MACRO AddTaskXXX() is not yet implemented/
956 // Run the analysis
957 //
958 if (kPluginUse) {
959 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
960 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
961 }
962
963 if (mgr->InitAnalysis()) {
964 mgr->PrintStatus();
965 // if (kSaveTrain || strlen(config_file)) gSystem->ChangeDirectory(kTrainName);
966 if (!strcmp(plugin_mode,"submit")&&smode=="GRID"){
967 TString alien_workdir = gGrid->GetHomeDirectory();
968 if (iAODanalysis) alien_workdir += "analysisAOD";
969 else alien_workdir += "analysisESD";
970 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
971 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
972 printf("=== AnalysisTrainPWG4Jets:: Registering jdl in the work directory alien://%s/%s, should be done by the manager! ===\n",
973 alien_workdir.Data(),gridhandler->GetGridOutputDir());
974
975 TString dest;
976 dest = Form("%s/%s/%s.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
977 if(AliAnalysisAlien::FileExists(dest.Data())){
978 // Printf("%s exist on grid removing...",dest.Data());
979 // gGrid->Rm(dest.Data());
980 }
981 TFile::Cp(Form("file:%s.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
982
983
984 TString dest;
985 dest = Form("%s/%s/%s_merge.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
986 if(AliAnalysisAlien::FileExists(dest.Data())){
987 // Printf("%s exist on grid removing...",dest.Data());
988 // gGrid->Rm(dest.Data());
989 }
990 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
991
992
993 dest = Form("%s/rootfiles/STEER/LQ1dRef_v1.root",gGrid->GetHomeDirectory());
994 if(AliAnalysisAlien::FileExists(dest.Data())){
995 Printf("%s exist on grid removing...",dest.Data());
996 gGrid->Rm(dest.Data());
997 }
998 TFile::Cp(Form("file:%s/STEER/LQ1dRef_v1.root",
999 gSystem->ExpandPathName("$ALICE_ROOT")),Form("alien://%s",dest.Data()));
1000 }
1001 AliLog::SetGlobalLogLevel(AliLog::kError);
1002 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
1003 TFile * fM = TFile::Open("manager_local.root","RECREATE");
1004 mgr->Write();
1005 fM->Close();
1006 }
1007
1008 // grmpf, aliroot error handler overwrites root
1009 gErrorIgnoreLevel = kErrorIgnoreLevel;
1010 if(gErrorIgnoreLevel>3000) AliLog::SetGlobalLogLevel(AliLog::kFatal);
1011 StartAnalysis(smode, chain);
1012 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
1013 for(int i = 0;i < mgr->GetTopTasks()->GetEntries();i++){
1014 mgr->ProfileTask(i);
1015 }
1016 }
1017 if (!strcmp(plugin_mode, "offline")&&smode=="GRID"){
1018 // Offline mode path files
1019 // PatchJDL();
1020 PatchAnalysisMacro();
1021 }
1022
1023 if (kSaveTrain && smode=="GRID") {
1024 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1025 TString alien_workdir = gGrid->GetHomeDirectory();
1026 if (iAODanalysis) alien_workdir += "analysisAOD";
1027 else alien_workdir += "analysisESD";
1028 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1029 // kGridOutdir = gridhandler->GetGridOutputDir();
1030 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
1031 alien_workdir.Data());
1032 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data())))
1033 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
1034 if (strcmp(plugin_mode, "test"))
1035 TFile::Cp(Form("file:%sConfig.C",kTrainName.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
1036 }
1037 }
1038}
1039
1040//______________________________________________________________________________
1041void StartAnalysis(const char *mode, TChain *chain) {
1042// Start analysis.
1043 Int_t imode = -1;
1044 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1045 if (!strcmp(mode, "LOCAL")) imode = 0;
1046 if (!strcmp(mode, "PROOF")) imode = 1;
1047 if (!strcmp(mode, "GRID")) imode = 2;
1048 switch (imode) {
1049 case 0:
1050 if (!chain) {
1051 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1052 return;
1053 }
1054 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
1055 return;
1056 case 1:
1057 if (!kProofDataSet.Length()) {
1058 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "kProofDataSet is empty");
1059 return;
1060 }
1061 mgr->StartAnalysis(mode, kProofDataSet, kProofEvents,kProofOffset);
1062 return;
1063 case 2:
1064 if (kPluginUse) {
1065 if (!mgr->GetGridHandler()) {
1066 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Grid plugin not initialized");
1067 return;
1068 }
1069 mgr->StartAnalysis("grid",chain,kNumberOfEvents);
1070 } else {
1071 if (!chain) {
1072 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1073 return;
1074 }
1075 mgr->StartAnalysis(mode, chain);
1076 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
1077 }
1078 return;
1079 }
1080}
1081
1082//______________________________________________________________________________
1083void CheckModuleFlags(const char *mode) {
1084// Checks selected modules and insure compatibility
1085 Int_t imode = -1;
1086 if (!strcmp(mode, "LOCAL")) imode = 0;
1087 if (!strcmp(mode, "PROOF")) imode = 1;
1088 if (!strcmp(mode, "GRID")) imode = 2;
1089
1090
1091 if (kUseCPAR) {
1092 kPluginAliRootVersion = ""; // NO aliroot if we use CPAR
1093 }
1094
1095 if (imode==1) {
1096 if (!kUsePAR) {
1097 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
1098 kUsePAR = kTRUE;
1099 }
1100 }
1101 if (imode != 2) {
1102 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
1103 kPluginUse = kFALSE;
1104 }
1105
1106
1107 if(!kIsMC){
1108 // switch off anthin related to MC
1109 kUseMC = 0;
1110 kUseAODMC = 0;
1111 kUseTR = kFALSE;
1112 }
1113
1114 // Decide if we have PbPb
1115 if(kGridDataSet.CompareTo("LHC10h")==0||kGridDataSet.Contains("LHC10h")) {
1116 Printf("Using settings for Pb+Pb");
1117 kIsPbPb = true;
1118 }
1119
1120
1121
1122 if (iAODanalysis) {
1123 // AOD analysis
1124 if (kUseMC)
1125 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
1126 if (kUseAODTags)
1127 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
1128 kUseMC = kFALSE;
1129 kUseTR = kFALSE;
1130 kUseAODTags = kFALSE;
1131 if (iESDfilter)
1132 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
1133 iESDfilter = 0;
1134 if (iPhysicsSelection)
1135 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "Physics Selection disabled in analysis on AOD's");
1136 iPhysicsSelection = 0;
1137 if (!iAODhandler) {
1138 if (iJETAN)
1139 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
1140 iJETAN = 0;
1141 iDIJETAN = 0;
1142 }
1143 // Disable tasks that do not work yet on AOD data
1144 if(iPWG4JCORRAN)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 JCORRAN disabled in analysis on AOD's");
1145 iPWG4JCORRAN = 0;
1146 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
1147 iPWG4PtQAMC = 0;
1148 if( iPWG4PtQATPC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtTPC disabled in analysis on AOD's");
1149 iPWG4PtQATPC = 0;
1150 if( iPWG4Cosmics)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Comics disabled in analysis on AOD's");
1151 iPWG4Cosmics = 0;
1152
1153 if( iPWG4PtSpectra)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
1154 iPWG4PtSpectra = 0;
1155 if(iPWG4KMeans)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4KMeans disabled on AOD's");
1156 iPWG4KMeans = 0;
1157 if (iPWG4JetCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4Jetcorr disabled on AOD's");
1158 iPWG4JetCorr = 0;
1159 if (iPWG4PartCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
1160 iPWG4PartCorr = 0;
1161 if (iPWG4CaloQA)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4CaloQA disabled on AOD's");
1162 iPWG4CaloQA = 0;
1163 if (iPWG4Tagged)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4tagged disabled on AOD's");
1164 iPWG4Tagged = 0;
1165 if (iPWG4omega3pi)
1166 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
1167 iPWG4omega3pi = 0;
1168 if(iPWG1QASym)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG1 QA Sym disabled in analysis on AOD's");
1169 if (iPWG4GammaConv)::Info("AnalysisPWG4Jets.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's");
1170 iPWG4GammaConv = 0;
1171 iPWG1QASym = 0;
1172 iCentralitySelection = 0;
1173 } else {
1174 // ESD analysis
1175
1176 if(kIsPbPb){
1177 iCentralitySelection = 1;
1178 }
1179
1180 if (!kUseMC){
1181 kUseTR = kFALSE;
1182
1183 if(kUseKinefilter)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Kine Filter disabled in analysis without MC");
1184 kUseKinefilter = kFALSE;
1185 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis without MC");
1186 iPWG4PtQAMC = 0;
1187 if( iPWG4CorrectionsUE)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 CorrectionsUE disabled in analysis without MC");
1188 iPWG4CorrectionsUE = 0;
1189 }
1190 if (!kUseTR) {
1191 if(iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "iPWG4QATPCMC disabled if not reading track references");
1192 iPWG4PtQAMC = 0;
1193 }
1194 if (iJETAN){
1195 iESDfilter=1;
1196 }
1197 if (!iESDfilter){
1198 kUseKinefilter = kFALSE;
1199 kUseMuonfilter = kFALSE;
1200 }
1201 if(!iJETAN){
1202 iPWG4JetSpectrum = iPWG4UE = iPWG4CorrectionsUE = iPWG4ThreeJets = iPWG4QGSep = iDIJETAN = 0;
1203 }
1204 }
1205 iPWG4JetTasks = iPWG4JetServices||iPWG4JetSpectrum||iPWG4UE||iPWG4LeadingUE||iPWG4PtQAMC||iPWG4PtSpectra||iPWG4PtQATPC||iPWG4Cosmics||iPWG4ThreeJets||iPWG4QGSep||iPWG4JetChem||iPWG4Minijet||iPWG4Fragmentation;
1206 iPWG4PartCorrLibs = iPWG4PartCorr||iPWG4Tagged||iPWG4CaloQA;
1207 iPWG4GammaConvLib = iPWG4GammaConv||iPWG4CaloConv;
1208
1209
1210 iEMCUtilLibs = iPWG4PartCorrLibs||iPWG4JCORRAN||iPWG4GammaConvLib;
1211 iJETANLib = iPWG4JetTasks||iJETAN||iDIJETAN;
1212
1213 if (iESDfilter) {iAODhandler=1;}
1214 if (kUseKinefilter && !kUseMC) kUseKinefilter = kFALSE;
1215 if (kUseAODTags && !iAODhandler) kUseAODTags = kFALSE;
1216
1217
1218
1219}
1220
1221//______________________________________________________________________________
1222Bool_t Connect(const char *mode) {
1223// Connect <username> to the back-end system.
1224 Int_t imode = -1;
1225 if (!strcmp(mode, "LOCAL")) imode = 0;
1226 if (!strcmp(mode, "PROOF")) imode = 1;
1227 if (!strcmp(mode, "GRID")) imode = 2;
1228 TString username = gSystem->Getenv("alien_API_USER");
1229 switch (imode) {
1230 case 0:
1231 break;
1232 case 1:
1233 if (!username.Length()) {
1234 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1235 1. Have called: alien-token-init <username>\n \
1236 2. Have called: >source /tmp/gclient_env_$UID");
1237 return kFALSE;
1238 }
1239 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
1240 username.Data(), kProofCluster.Data());
1241 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
1242// TProof::Open(Form("%s@%s:31093", username.Data(), kProofCluster.Data()));
1243 TProof::Open(Form("%s@%s", username.Data(), kProofCluster.Data()));
1244 if (!gProof) {
1245 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
1246 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
1247 return kFALSE;
1248 }
1249 if(kProofClearPackages)gProof->ClearPackages();
1250
1251 if(kProofSaveToAlien){
1252 TGrid::Connect("alien://");
1253 if (gGrid) {
1254 TString homedir = gGrid->GetHomeDirectory();
1255 TString workdir = homedir + kTrainName;
1256 if (!gGrid->Cd(workdir)) {
1257 gGrid->Cd(homedir);
1258 if (gGrid->Mkdir(workdir)) {
1259 gGrid->Cd(kTrainName);
1260 ::Info("AnalysisTrainPWG4Jets::Connect()", "Directory %s created", gGrid->Pwd());
1261 }
1262 }
1263 gGrid->Mkdir("proof_output");
1264 gGrid->Cd("proof_output");
1265 kProofOutdir = Form("alien://%s", gGrid->Pwd());
1266 }
1267 }
1268 break;
1269 case 2:
1270 if (!username.Length()) {
1271 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1272 1. Have called: alien-token-init <username>\n \
1273 2. Have called: >source /tmp/gclient_env_$UID");
1274 return kFALSE;
1275 }
1276 if (kPluginUse && !gSystem->Getenv("alien_CLOSE_SE")) {
1277 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode),
1278 "When using the AliEn plugin it is preferable to define the \
1279 variable alien_CLOSE_SE in your environment.");
1280 return kFALSE;
1281 }
1282 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to AliEn ...",
1283 username.Data());
1284 TGrid::Connect("alien://");
1285 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
1286 break;
1287 default:
1288 ::Error("AnalysisTrainPWG4Jets.C::Connect", "Unknown run mode: %s", mode);
1289 return kFALSE;
1290 }
1291 ::Info("AnalysisTrainPWG4Jets.C::Connect","Connected in %s mode", mode);
1292 return kTRUE;
1293}
1294
1295//______________________________________________________________________________
1296Bool_t LoadCommonLibraries(const char *mode)
1297{
1298// Load common analysis libraries.
1299 Int_t imode = -1;
1300 if (!strcmp(mode, "LOCAL")) imode = 0;
1301 if (!strcmp(mode, "PROOF")) imode = 1;
1302 if (!strcmp(mode, "GRID")) imode = 2;
1303 if (!gSystem->Getenv("ALICE_ROOT")) {
1304 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Analysis train requires that ALICE_ROOT is set to pick up Configurations");
1305 return kFALSE;
1306 }
1307 Bool_t success = kTRUE;
1308 // ROOT libraries
1309 gSystem->Load("libTree.so");
1310 gSystem->Load("libGeom.so");
1311 gSystem->Load("libVMC.so");
1312 gSystem->Load("libPhysics.so");
1313
1314 // Load framework classes. Par option ignored here.
1315 switch (imode) {
1316 case 0:
1317 case 2:
1318 if (kUseCPAR) {
1319 success &= LoadLibrary("STEERBase", mode, kTRUE);
1320 success &= LoadLibrary("ESD", mode, kTRUE);
1321 success &= LoadLibrary("AOD", mode, kTRUE);
1322 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
1323 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
1324 success &= LoadLibrary("EventMixing", mode,kTRUE);
1325 success &= LoadLibrary("CORRFW", mode, kTRUE);
1326 } else {
1327 success &= LoadLibrary("libSTEERBase.so", mode);
1328 success &= LoadLibrary("libESD.so", mode);
1329 success &= LoadLibrary("libAOD.so", mode);
1330 success &= LoadLibrary("libANALYSIS.so", mode);
1331 success &= LoadLibrary("libANALYSISalice.so", mode);
1332 success &= LoadLibrary("libEventMixing.so", mode);
1333 success &= LoadLibrary("libCORRFW.so", mode);
1334 gROOT->ProcessLine(".include $ALICE_ROOT/include");
1335 }
1336 break;
1337 case 1:
1338 Int_t ires = -1;
1339 if (kProofUseAFPAR && !gSystem->AccessPathName(kProofAFversion)) ires = gProof->UploadPackage(kProofAFversion);
1340 if (ires < 0) {
1341 success &= LoadLibrary("STEERBase", mode);
1342 success &= LoadLibrary("ESD", mode);
1343 success &= LoadLibrary("AOD", mode);
1344 success &= LoadLibrary("ANALYSIS", mode);
1345 success &= LoadLibrary("ANALYSISalice", mode);
1346 success &= LoadLibrary("EventMixing", mode);
1347 success &= LoadLibrary("CORRFW", mode);
1348 } else {
1349 ires = gProof->EnablePackage(kProofAFversion);
1350 if (ires<0) success = kFALSE;
1351 success &= LoadLibrary("CORRFW", mode);
1352 }
1353 break;
1354 default:
1355 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
1356 return kFALSE;
1357 }
1358 if (success) {
1359 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
1360 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
1361 gSystem->GetIncludePath());
1362 } else {
1363 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: FAILED");
1364 }
1365
1366 return success;
1367}
1368
1369//______________________________________________________________________________
1370Bool_t LoadAnalysisLibraries(const char *mode)
1371{
1372// Load common analysis libraries.
1373 Bool_t success = kTRUE;
1374 if (useTender) {
1375 if (!LoadLibrary("TENDER", mode, kTRUE) ||
1376 !LoadLibrary("TENDERSupplies", mode, kTRUE)) return kFALSE;
1377 }
1378 if (iESDfilter) {
1379 /*
1380 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
1381 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
1382 */
1383 }
1384 // JETAN
1385 if (iJETANLib) {
1386 // this part needs some rework in case we do not need the fastjed finders for processing
1387 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
1388 if (!strcmp(mode, "PROOF")){
1389 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libCGAL.so\"\)", kTRUE);
1390 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libfastjet.so\"\)", kTRUE);
1391 // problem when loading siscone copiled with different gcc version??
1392 // gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libsiscone.so\"\)", kTRUE);
1393 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libSISConePlugin.so\"\)", kTRUE);
1394 }
1395 if(!kUsePAR){
1396 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
1397 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
1398 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
1399 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
1400 }
1401 else{
1402 // par files plus FASTJET needs some extra work... need to change
1403 // the loading sequence in the auto generated .C file
1404 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
1405 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
1406 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
1407 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
1408 }
1409 if (!LoadLibrary("FASTJETAN", mode, kTRUE)) return kFALSE;
1410 }
1411 if(iPWG4JetTasks){
1412 if (!LoadLibrary("PWG4JetTasks", mode, kTRUE)) return kFALSE;
1413 }
1414
1415 if(iPWG1QASym){
1416 if (!LoadSource(Form("%s/PWG1/AliAnalysisTaskQASym.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1417 }
1418 if(iPWG4TmpSourceSara){
1419 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
1420 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskEta.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1421 }
1422
1423 /*
1424 if(iPWG4JetChem){
1425 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
1426 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskJetChem.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1427 }
1428 */
1429
1430 if(iEMCUtilLibs){
1431 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
1432 !LoadLibrary("PHOSUtils", mode, kTRUE)) return kFALSE;
1433 }
1434
1435 if (iPWG4PartCorrLibs) {
1436 if (!LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
1437 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
1438 }
1439 if(iPWG4JCORRAN){
1440 // PWG4 particle correlations
1441 if(!LoadLibrary("PWG4JCORRAN",mode,kTRUE))return kFALSE;
1442 }
1443 if (iPWG4JetCorr) {
1444 if (!LoadLibrary("PWG4JetCorrel", mode, kTRUE)) return kFALSE;
1445 }
1446 if (iPWG4omega3pi) {
1447 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
1448 }
1449 if (iPWG4GammaConvLib) {
1450 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
1451 }
1452
1453 ::Info("AnalysisTrainPWG4Jets.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
1454 return kTRUE;
1455}
1456
1457//______________________________________________________________________________
1458Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
1459{
1460// Load a module library in a given mode. Reports success.
1461 Int_t imode = -1;
1462 Int_t result;
1463 TString smodule(module);
1464 if (!strcmp(mode, "LOCAL")) imode = 0;
1465 if (!strcmp(mode, "PROOF")) imode = 1;
1466 if (!strcmp(mode, "GRID")) imode = 2;
1467 TString mod(module);
1468 if (!mod.Length()) {
1469 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Empty module name");
1470 return kFALSE;
1471 }
1472 // If a library is specified, just load it
1473 if (smodule.EndsWith(".so")) {
1474 mod.Remove(mod.Index(".so"));
1475 result = gSystem->Load(mod);
1476 if (result < 0) {
1477 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load library %s", module);
1478 return kFALSE;
1479 }
1480 if (rec) anaLibs += Form("%s.so ",mod.Data());
1481 if (rec) anaLibsExtra += Form("%s.so ",mod.Data());
1482 return kTRUE;
1483 }
1484 // Check if the library is already loaded
1485 if (strlen(gSystem->GetLibraries(Form("%s.so", module), "", kFALSE)) > 0)
1486 return kTRUE;
1487 switch (imode) {
1488 case 0:
1489 case 2:
1490 if (kUsePAR) {
1491 result = SetupPar(module);
1492 if (rec) anaPars += Form("%s.par ", module);
1493 } else {
1494 result = gSystem->Load(Form("lib%s.so", module));
1495 if (rec) anaLibs += Form("lib%s.so ", module);
1496 }
1497 break;
1498 case 1:
1499 if(!gSystem->AccessPathName(module)){
1500 ::Info("AnalysisTrainPWG4Jets.C::LoadLibrary", "Removing directory %s",module);
1501 gSystem->Exec(Form("rm -rf %s",module));
1502 }
1503 result = gProof->UploadPackage(module);
1504 if (result<0) {
1505 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
1506 if (result<0) {
1507 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
1508 return kFALSE;
1509 }
1510 }
1511 result = gProof->EnablePackage(module);
1512 break;
1513 default:
1514 return kFALSE;
1515 }
1516 if (result < 0) {
1517 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load module %s", module);
1518 return kFALSE;
1519 }
1520 return kTRUE;
1521}
1522
1523
1524
1525//______________________________________________________________________________
1526Bool_t LoadSource(const char *source, const char *mode, Bool_t rec=kFALSE)
1527{
1528// Load a module library in a given mode. Reports success.
1529 Int_t imode = -1;
1530 Int_t result = -1;
1531 if (!strcmp(mode, "LOCAL")) imode = 0;
1532 if (!strcmp(mode, "PROOF")) imode = 1;
1533 if (!strcmp(mode, "GRID")) imode = 2;
1534 TString ssource(source);
1535 TString basename = gSystem->BaseName(ssource.Data());
1536 if (!ssource.Length()) {
1537 ::Error("AnalysisTrainPWG4Jets.C::LoadSource", "Empty task name");
1538 return kFALSE;
1539 }
1540 // we have a source code so compile it
1541 if (ssource.EndsWith(".cxx")) {
1542 // need to copy it here other wise the path is also used on grid...
1543 ssource.Remove(ssource.Index(".cxx"));
1544 basename.Remove(basename.Index(".cxx"));
1545 Printf("LoadSources:: Copying... path %s{cxx,h}",ssource.Data());
1546 gSystem->Exec(Form("cp %s.cxx . ",ssource.Data()));
1547 gSystem->Exec(Form("cp %s.h . ",ssource.Data()));
1548 // Path to code
1549 // only needed for local compilation, in grid and proof mode
1550 // the task headers are uploaded
1551 // path.Remove(path.Index(gSystem->BaseName(path.Data())));
1552 // Printf("LoadSources:: Including path %s",path.Data());
1553 // if(path.Length()>0)gROOT->ProcessLine(Form(".include %s",path.Data()));
1554 Printf("LoadSources:: Loading... path %s",basename.Data());
1555 switch (imode) {
1556 case 0:
1557 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
1558 break;
1559 case 1:
1560 result = gProof->LoadMacro(Form("%s.cxx++g",basename.Data()));
1561 break;
1562 case 2:
1563 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
1564 if (rec){
1565 // what we want to compile
1566 anaSources += Form("%s.cxx ",basename.Data());
1567 // what we need as input...
1568 anaLibs += Form("%s.cxx %s.h ",basename.Data(),basename.Data());
1569 }
1570 break;
1571 default:
1572 return kFALSE;
1573 }
1574 }
1575 if (result < 0) {
1576 ::Error("AnalysisTrainPWG4Jets.C::LoadSources", "Could not load source %s", source);
1577 return kFALSE;
1578 }
1579 return kTRUE;
1580}
1581
1582
1583//______________________________________________________________________________
1584TChain *CreateChain(const char *mode, const char *plugin_mode)
1585{
1586// Create the input chain
1587 Int_t imode = -1;
1588 if (!strcmp(mode, "LOCAL")) imode = 0;
1589 if (!strcmp(mode, "PROOF")) imode = 1;
1590 if (!strcmp(mode, "GRID")) imode = 2;
1591 TChain *chain = NULL;
1592 // Local chain
1593 switch (imode) {
1594 case 0:
1595 if (iAODanalysis) {
1596 if (!kLocalXMLDataset.Length()) {
1597 // Local AOD
1598 chain = new TChain("aodTree");
1599 TString line;
1600 ifstream in;
1601 in.open(kLocalDataList.Data());
1602 while (in.good()) {
1603 in >> line;
1604 if (line.Length() == 0) continue;
1605 // cout << " line = " << line << endl;
1606 chain->Add(line.Data());
1607 }
1608 } else {
1609 // Interactive AOD
1610 chain = CreateChainSingle(kLocalXMLDataset, "aodTree");
1611 }
1612 } else {
1613 if (!kLocalXMLDataset.Length()) {
1614 // Local ESD
1615 chain = new TChain("esdTree");
1616 TString line;
1617 ifstream in;
1618 in.open(kLocalDataList.Data());
1619 while (in.good()) {
1620 in >> line;
1621 if (line.Length() == 0) continue;
1622 cout << " line = " << line << endl;
1623 chain->Add(line.Data());
1624 }
1625 } else {
1626 // Interactive ESD
1627 chain = CreateChainSingle(kLocalXMLDataset, "esdTree");
1628 }
1629 }
1630 break;
1631 case 1:
1632 break;
1633 case 2:
1634 if (kPluginUse) {
1635// AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1636// AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1637 } else {
1638 TString treeName = "esdTree";
1639 if (iAODanalysis) treeName = "aodTree";
1640 chain = CreateChainSingle("wn.xml", treeName);
1641 }
1642 break;
1643 default:
1644 }
1645 if (chain && chain->GetNtrees()) return chain;
1646 return NULL;
1647}
1648
1649//______________________________________________________________________________
1650TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
1651{
1652 printf("*******************************\n");
1653 printf("*** Getting the ESD Chain ***\n");
1654 printf("*******************************\n");
1655 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
1656
1657 if (!myCollection) {
1658 ::Error("AnalysisTrainPWG4Jets.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
1659 return NULL ;
1660 }
1661
1662 TChain* chain = new TChain(treeName);
1663 myCollection->Reset() ;
1664 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
1665 chain->ls();
1666 return chain;
1667}
1668
1669//______________________________________________________________________________
1670Int_t SetupPar(char* pararchivename)
1671{
1672 if (!pararchivename || !strlen(pararchivename)) return -1;
1673 char processline[1024];
1674 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
1675 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
1676 ::Info("AnalysisTrainPWG4Jets.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
1677 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
1678 Form("%s.par",pararchivename));
1679 } else {
1680 ::Error("AnalysisTrainPWG4Jets.C::SetupPar", "Cannot find %s.par", pararchivename);
1681 return -1;
1682 }
1683 }
1684 if (kPluginUse && kSaveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, kTrainName.Data()));
1685 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
1686
1687 TString ocwd = gSystem->WorkingDirectory();
1688 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
1689
1690 // check for BUILD.sh and execute
1691 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
1692 printf("*******************************\n");
1693 printf("*** Building PAR archive ***\n");
1694 printf("*******************************\n");
1695 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
1696 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
1697 return -1;
1698 }
1699 }
1700
1701 // check for SETUP.C and execute
1702 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
1703 printf("*******************************\n");
1704 printf("*** Setup PAR archive ***\n");
1705 printf("*******************************\n");
1706 gROOT->Macro("PROOF-INF/SETUP.C");
1707 }
1708 if (!gSystem->ChangeDirectory(ocwd.Data())) return -1;
1709 return 0;
1710}
1711
1712//______________________________________________________________________________
1713AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
1714{
1715// Check if user has a valid token, otherwise make one. This has limitations.
1716// One can always follow the standard procedure of calling alien-token-init then
1717// source /tmp/gclient_env_$UID in the current shell.
1718// if (!AliAnalysisGrid::CreateToken()) return NULL;
1719 AliAnalysisAlien *plugin = new AliAnalysisAlien();
1720// Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
1721 plugin->SetRunMode(plugin_mode);
1722 if (kPluginUseProductionMode) plugin->SetProductionMode();
1723 plugin->SetJobTag(kJobTag);
1724 plugin->SetNtestFiles(2);
1725// plugin->SetPreferedSE("ALICE::NIHAM::File");
1726// Set versions of used packages
1727 plugin->SetAPIVersion("V1.1x");
1728 // plugin->SetAPIVersion("V1.0x");
1729// plugin->SetAPIVersion("V2.4");
1730 plugin->SetROOTVersion(kPluginRootVersion);
1731 plugin->SetAliROOTVersion(kPluginAliRootVersion);
1732// Declare input data to be processed.
1733// Method 1: Create automatically XML collections using alien 'find' command.
1734// Define production directory LFN
1735 plugin->SetGridDataDir(kGridDatadir.Data());
1736// Set data search pattern
1737 if (iAODanalysis) plugin->SetDataPattern(" *AliAOD.root");
1738 // else plugin->SetDataPattern(Form(" %s/*/*ESD.tag.root",kGridPassPattern.Data()));
1739 else plugin->SetDataPattern(Form(" %s/*/*AliESDs.root",kGridPassPattern.Data()));
1740// ...then add run numbers to be considered
1741// plugin->SetRunRange(kGridRunRange[0], kGridRunRange[1]);
1742 for (Int_t i=kGridRunRange[0]; i<=kGridRunRange[1]; i++) {
1743 Printf("AnalysisTrainPWG4Jets Adding run number %s", Form(kGridRunPattern.Data(),i));
1744 plugin->AddRunNumber(Form(kGridRunPattern.Data(),i));
1745 }
1746
1747 if(kGridLocalRunList.Length()>0){
1748 ifstream in1;
1749 in1.open(kGridLocalRunList.Data());
1750 int iRun;
1751 int icount = 0;
1752 /*
1753 char c;
1754 char cLine[250];
1755 while(!in1.eof()){
1756 c = in1.get();
1757 if ( (c >= '0') && (c <= '9') )
1758 {
1759 in1.putback (c);
1760 in1>>iRun;
1761 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1762 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1763 }
1764 else
1765 {
1766 in1.putback (c);
1767 in1.getline(cLine,250);
1768
1769 }
1770 }
1771 */
1772
1773 Int_t nRun = 0;
1774
1775 // just use run numbers, negatives will be excluded
1776 while(in1>>iRun){
1777 if(iRun>=0){
1778 if(iRun>=0&&nRun>=kGridOffsetRunFromList&&(nRun<kGridMaxRunsFromList)){
1779 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1780 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1781
1782 }
1783 else{
1784 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d", iRun);
1785 }
1786 nRun++;
1787 }
1788 else{
1789 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d", iRun);
1790 }
1791 }
1792 }
1793
1794// Method 2: Declare existing data files (raw collections, xml collections, root file)
1795// If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
1796// XML collections added via this method can be combined with the first method if
1797// the content is compatible (using or not tags)
1798// plugin->AddDataFile("tag.xml");
1799// plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
1800// Define alien work directory where all files will be copied. Relative to alien $HOME.
1801 TString alien_workdir = "";
1802
1803 if (iAODanalysis) alien_workdir += "analysisAOD";
1804 else alien_workdir += "analysisESD";
1805 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1806 plugin->SetGridWorkingDir(alien_workdir.Data());
1807
1808 // Declare alien output directory. Relative to working directory.
1809 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1810 plugin->SetGridOutputDir(kGridOutdir);
1811
1812 // Add external packages
1813 if (iJETAN||iDIJETAN) {
1814 plugin->AddExternalPackage("boost::v1_43_0");
1815 plugin->AddExternalPackage("cgal::v3.6");
1816 plugin->AddExternalPackage("fastjet::v2.4.2");
1817 }
1818
1819
1820 // set extra libs before par file compilation
1821 anaLibs += kGridExtraFiles;
1822 anaLibs = anaLibs.Strip();
1823 Printf("anaLibs %s",anaLibs.Data());
1824 Printf("anaLibsExtra %s",anaLibsExtra.Data());
1825
1826 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs.Data());
1827 if (anaLibsExtra.Length()) plugin->SetAdditionalRootLibs(anaLibsExtra.Data());
1828
1829 TString ana_sources = "";
1830 TString ana_add = "";
1831 if (kUsePAR && anaPars.Length()) {
1832 printf("%s\n", anaPars.Data());
1833 TObjArray *arr;
1834 TObjString *objstr;
1835 arr = anaPars.Tokenize(" ");
1836 TIter next(arr);
1837 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
1838 delete arr;
1839 }
1840
1841// Declare the analysis source files names separated by blancs. To be compiled runtime
1842// using ACLiC on the worker nodes.
1843 ana_sources = anaSources.Strip();
1844// Declare all libraries (other than the default ones for the framework. These will be
1845// loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
1846
1847 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
1848 plugin->SetExecutableCommand(kPluginExecutableCommand.Data());
1849 // Declare the output file names separated by blancs.
1850 // (can be like: file.root or file.root@ALICE::Niham::File)
1851 plugin->SetMergeExcludes(kGridMergeExclude);
1852 plugin->SetMaxMergeFiles(kGridMaxMergeFiles);
1853 plugin->SetNrunsPerMaster(kGridRunsPerMaster);
1854 plugin->SetMergeViaJDL(kPluginMergeViaJDL);
1855 // Use fastread option
1856 plugin->SetFastReadOption(kPluginFastReadOption);
1857 // UseOverwrite mode
1858 plugin->SetOverwriteMode(kPluginOverwriteMode);
1859 // Optionally define the files to be archived.
1860 // plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
1861 plugin->SetOutputToRunNo(kPluginOutputToRunNumber); // write the output to subdirs named after run number
1862
1863 // Put default output files to archive
1864 TString listhists = "";
1865 TString listaods = "";
1866 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1867 TIter next(mgr->GetOutputs());
1868 AliAnalysisDataContainer *output;
1869 while ((output=(AliAnalysisDataContainer*)next())) {
1870 const char *filename = output->GetFileName();
1871 if (!(strcmp(filename, "default"))) {
1872 if (!mgr->GetOutputEventHandler()) continue;
1873 filename = mgr->GetOutputEventHandler()->GetOutputFileName();
1874 if (listaods.Length()) listaods += " ";
1875 listaods += filename;
1876 } else {
1877 if(!listhists.Contains(filename)){
1878 if (listhists.Length()) listhists += " ";
1879 listhists += filename;
1880 }
1881 }
1882 }
1883
1884 if (mgr->GetExtraFiles().Length()) {
1885 if (listaods.Length()) listaods += " ";
1886 listaods += mgr->GetExtraFiles();
1887 }
1888
1889 // if we do not fill the aod we do not need to store it
1890 // kGridMergeExclude = listaods;
1891
1892 if(kSaveAOD>=0){
1893 TString outputFiles = "";
1894 outputFiles += mgr->GetExtraFiles();
1895 if (listhists.Length()) outputFiles += " ";
1896 outputFiles += listhists;
1897 plugin->SetDefaultOutputs(kFALSE);
1898 Printf("%s:%d Starting with the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
1899 // remove
1900 // no harm done when we try to remove something that is not there :)
1901 if(!(kSaveAOD&(1<<0))){
1902 outputFiles.ReplaceAll("AliAOD.root ","");
1903 listaods.ReplaceAll("AliAOD.root ","");
1904 }
1905 if(!(kSaveAOD&(1<<1))){
1906 if(kDeltaAODJetName.Length())outputFiles.ReplaceAll(kDeltaAODJetName.Data(),"");
1907 if(kDeltaAODJetName.Length())listaods.ReplaceAll(kDeltaAODJetName.Data(),"");
1908
1909 }
1910 if(!(kSaveAOD&(1<<2))){
1911 if(kDeltaAODPartCorrName.Length())outputFiles.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
1912 if(kDeltaAODPartCorrName.Length())listaods.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
1913 }
1914 if(!(kSaveAOD&(1<<3))){
1915 if(kDeltaAODJCORRANName.Length())outputFiles.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
1916 if(kDeltaAODJCORRANName.Length())listaods.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
1917 }
1918
1919 //
1920 plugin->SetDefaultOutputs(kFALSE);
1921 Printf("%s:%d Saving the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
1922 plugin->SetOutputFiles(outputFiles.Data());
1923 }
1924
1925 TString outputArchive;
1926 outputArchive = Form("log_archive.zip:std*@%s","disk=1");
1927 listaods.ReplaceAll(" ", ",");
1928 listhists.ReplaceAll(" ", ",");
1929 if (listhists.Length()){
1930 outputArchive += " ";
1931 outputArchive += "root_archive.zip:";
1932 outputArchive += listhists;
1933 if (listaods.Length()){
1934 outputArchive += ",";
1935 outputArchive += listaods;
1936 }
1937 outputArchive += Form("@%s", kGridOutputStorages.Data());
1938 }
1939 else{
1940
1941 if (listaods.Length()){
1942 // we have only aod'ish output
1943 outputArchive += " ";
1944 outputArchive += "root_archive.zip:";
1945 outputArchive += listaods;
1946 outputArchive += Form("@%s", kGridOutputStorages.Data());
1947 }
1948 else{
1949 // no other outputs than std..
1950 ::Fatal("AnalysisTrainPWG4Jets", "No task output !");
1951 }
1952 }
1953
1954 plugin->SetDefaultOutputs(kFALSE);
1955 plugin->SetOutputArchive(outputArchive);
1956
1957
1958 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
1959 plugin->SetAnalysisMacro(Form("%s.C", kTrainName.Data()));
1960 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
1961 plugin->SetSplitMaxInputFileNumber(kGridFilesPerJob);
1962 // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
1963 // plugin->SetMaxInitFailed(5);
1964 // Optionally resubmit threshold.
1965 // plugin->SetMasterResubmitThreshold(90);
1966 // Optionally set time to live (default 30000 sec)
1967 plugin->SetTTL(54000); // 15h...
1968 // Optionally set input format (default xml-single)
1969 plugin->SetInputFormat("xml-single");
1970 // Optionally modify the name of the generated JDL (default analysis.jdl)
1971 plugin->SetJDLName(Form("%s.jdl", kTrainName.Data()));
1972 // Optionally modify the executable name (default analysis.sh)
1973 plugin->SetExecutable(Form("%s.sh", kTrainName.Data()));
1974 // Optionally modify job price (default 1)
1975 plugin->SetPrice(1);
1976 // Optionally modify split mode (default 'se')
1977 plugin->SetSplitMode("se");
1978 return plugin;
1979}
1980
1981//______________________________________________________________________________
1982void WriteConfig()
1983{
1984// Write train configuration in a file. The file name has the format:
1985// train_[trainName]_ddMonthyyyy_time.C
1986 if (kUseDate) {
1987 gSystem->Exec("date +%d%b%Y_%Hh%M > date.tmp");
1988 ifstream fdate("date.tmp");
1989 if (!fdate.is_open()) {
1990 ::Error("AnalysisTrainPWG4Jets.C::Export","Could not generate file name");
1991 return;
1992 }
1993 const char date[64];
1994 fdate.getline(date,64);
1995 fdate.close();
1996 gSystem->Exec("rm date.tmp");
1997 kTrainName = Form("train_%s_%s", kTrainName.Data(), date);
1998 } else {
1999 kTrainName = Form("train_%s", kTrainName.Data());
2000 }
2001 TString cdir = gSystem->WorkingDirectory();
2002 gSystem->MakeDirectory(kTrainName);
2003 gSystem->ChangeDirectory(kTrainName);
2004 ofstream out;
2005 out.open(Form("%sConfig.C",kTrainName.Data()), ios::out);
2006 if (out.bad()) {
2007 ::Error("AnalysisTrainPWG4Jets.C::Export", "Cannot open ConfigTrain.C for writing");
2008 return;
2009 }
2010 out << "{" << endl;
2011 out << " kTrainName = " << "\"" << kTrainName.Data() << "\";" << endl;
2012 out << " kProofCluster = " << "\"" << kProofCluster.Data() << "\";" << endl;
2013 out << " kProofUseAFPAR = " << kProofUseAFPAR << ";" << endl;
2014 if (kProofUseAFPAR)
2015 out << " kProofAFversion = " << kProofAFversion.Data() << ";" << endl;
2016 out << " kProofDataSet = " << "\"" << kProofDataSet.Data() << "\";" << endl;
2017 out << " kPluginUse = " << kPluginUse << ";" << endl;
2018 out << " kUsePAR = " << kUsePAR << ";" << endl;
2019 out << " kUseCPAR = " << kUseCPAR << ";" << endl;
2020 out << " kPluginRootVersion = " << "\"" << kPluginRootVersion.Data() << "\";" << endl;
2021 out << " kPluginAliRootVersion = " << "\"" << kPluginAliRootVersion.Data() << "\";" << endl;
2022 out << " kGridDatadir = " << "\"" << kGridDatadir.Data() << "\";" << endl;
2023 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
2024 out << " kGridOutdir = " << "\"" << kGridOutdir.Data() << "\";" << endl;
2025 out << " kGridMaxMergeFiles = " << kGridMaxMergeFiles << ";" << endl;
2026 out << " kGridMergeExclude = " << "\"" << kGridMergeExclude.Data() << "\";" << endl;
2027 out << " kGridRunsPerMaster = " << kGridRunsPerMaster << ";" << endl;
2028 out << " kGridFilesPerJob = " << kGridFilesPerJob << ";" << endl;
2029 out << " kGridRunRange[0] = " << kGridRunRange[0] << ";" << endl;
2030 out << " kGridRunRange[1] = " << kGridRunRange[1] << ";" << endl;
2031 out << " kUseDebug = " << kUseDebug << ";" << endl;
2032 out << " kUseMC = " << kUseMC << ";" << endl;
2033 out << " kUseESDTags = " << kUseESDTags << ";" << endl;
2034 out << " kUseKinefilter = " << kUseKinefilter << ";" << endl;
2035 out << " kUseTR = " << kUseTR << ";" << endl;
2036 out << " kUseAODTags = " << kUseAODTags << ";" << endl;
2037 out << " kSaveTrain = " << "kFALSE;" << endl << endl;
2038 out << " // Analysis modules" << endl;
2039 out << " iAODanalysis = " << iAODanalysis << ";" << endl;
2040 out << " iAODhandler = " << iAODhandler << ";" << endl;
2041 out << " iESDfilter = " << iESDfilter << ";" << endl;
2042 out << " iJETAN = " << iJETAN << ";" << endl;
2043 out << "// Configuration fot the wagons" << endl;
2044 out << "}" << endl;
2045 ::Info("AnalysisTrainPWG4Jets.C::WriteConfig", "Train configuration wrote to file %s", Form("config_%s.C", kTrainName.Data()));
2046 gSystem->ChangeDirectory(cdir);
2047}
2048
2049//______________________________________________________________________________
2050Bool_t LoadConfig(const char *filename)
2051{
2052// Read train configuration from file
2053 if (gSystem->AccessPathName(filename)) {
2054 ::Error("AnalysisTrainPWG4Jets.C::LoadConfig", "Config file name not found");
2055 return kFALSE;
2056 }
2057 gROOT->ProcessLine(Form(".x %s", filename));
2058 ::Info("AnalysisTrainPWG4Jets.C::LoadConfig", "Train configuration loaded from file %s", filename);
2059 return kTRUE;
2060}
2061
2062Bool_t PatchJDL(){
2063 Printf(">>> Patching JDL");
2064 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
2065 AliAnalysisAlien* gridHandler = (AliAnalysisAlien*)mgr->GetGridHandler();
2066 TGridJDL *jdl = gridHandler->GetGridJDL();
2067 if(iJETAN)jdl->AddToPackages("fastjet","v2.4.0");
2068 gridHandler->WriteJDL(kFALSE);
2069 Printf("<<< Patching JDL");
2070 return kTRUE;
2071}
2072
2073Bool_t PatchAnalysisMacro(){
2074 Printf(">>> Patching AnalysisMacro");
2075 gSystem->Exec(Form("mv %s.C %s.C_tmp",kTrainName.Data(),kTrainName.Data()));
2076
2077 ifstream in1;
2078 in1.open(Form("%s.C_tmp", kTrainName.Data()));
2079 char cLine[250];
2080 TString st;
2081 while(in1.getline(cLine,250)){
2082 st += cLine;
2083 st += "\n";
2084 }
2085 Int_t index= -1;
2086 index = st.Index("gSystem->Load(\"libPhysics\");");
2087 index += strlen("gSystem->Load(\"libPhysics\");");
2088 /*
2089 TObjArray *arr;
2090 TObjString *objstr;
2091 arr = anaLibs.Tokenize(" ");
2092 TIter next(arr);
2093
2094 add += "\n\n // added by CKB \n";
2095 while ((objstr=(TObjString*)next())){
2096 if(objstr->GetString().Contains("PWG3"))continue;
2097 if(objstr->GetString().EndsWith(".so"))add += Form("gSystem->Load(\"%s\");\n",objstr->GetString().Data());
2098 }
2099 delete arr;
2100 */
2101 // add += Form("AliLog::SetGlobalLogLevel(%d);\n",AliLog::GetGlobalLogLevel());
2102 TString add = "";
2103
2104 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2105 add += "\n\n // added by CKB \n";
2106 if(kErrorIgnoreLevel>0)add += Form("gErrorIgnoreLevel = %d;\n",kErrorIgnoreLevel);
2107 add += "\n gSystem->AddIncludePath(\"./\"); \n";
2108 add += "\n gSystem->SetFPEMask(); \n";
2109
2110
2111 if(gGrid&&kPluginAliRootVersion.Length()==0){
2112 add += "\n // Dirty hack for TRD reference data \n";
2113 add += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2114 add += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2115 add += "\"); \n";
2116 }
2117 add += "// BKC \n\n";
2118 st.Insert(index,add.Data());
2119
2120 if(kUseDebug){
2121 // st.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
2122 }
2123
2124 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
2125 index = st.Index("gSystem->AddIncludePath(\"-I$"); // uncommen $ALICE_ROOT include for par files
2126 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2127 st.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2128 }
2129
2130 if(AliLog::GetGlobalLogLevel()==AliLog::kFatal){
2131 index = st.Index("AliLog::SetGlobal"); // ncomment setting of log level, do my own
2132 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2133 st.Insert(index,"AliLog::SetGlobalLogLevel(AliLog::kFatal);// CKB \n // CKB comment out for own setting \n //");
2134 }
2135
2136 ofstream out;
2137 out.open(Form("%s.C", kTrainName.Data()));
2138 if (out.bad()) {
2139 return kFALSE;
2140 }
2141 out << st << endl;
2142 Printf("<<< Patching AnalysisMacro");
2143
2144
2145
2146
2147
2148 Printf(">>> Patching Merge Macro");
2149 gSystem->Exec(Form("mv %s_merge.C %s_merge.C_tmp",kTrainName.Data(),kTrainName.Data()));
2150
2151 ifstream in2;
2152 in2.open(Form("%s_merge.C_tmp", kTrainName.Data()));
2153 TString st2;
2154 while(in2.getline(cLine,250)){
2155 st2 += cLine;
2156 st2 += "\n";
2157 }
2158 index = st2.Index("gSystem->Load(\"libPhysics\");");
2159 index += strlen("gSystem->Load(\"libPhysics\");");
2160 TString add2 = "";
2161 add2 += "\n gSystem->AddIncludePath(\"./\"); \n";
2162 if(gGrid&&kPluginAliRootVersion.Length()==0){
2163 add2 += "\n // Dirty hack for TRD reference data \n";
2164 add2 += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2165 add2 += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2166 add2 += "\"); \n";
2167 }
2168 add2 += "// BKC \n\n";
2169 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2170 st2.Insert(index,add.Data());
2171
2172
2173 if(kUseDebug){
2174 // st2.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
2175 }
2176
2177 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
2178 index = st2.Index("gSystem->AddIncludePath(\"-I$"); // uncomment $ALICE_ROOT include for par files
2179 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2180 st2.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2181 }
2182
2183 // do not exclude the extra files from merign, this is done explicitly in this train script
2184 // index = st2.Index("mergeExcludes +="); // uncommen $ALICE_ROOT include for par files
2185 // if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2186 // st2.Insert(index,"// CKB comment out, handled explicitly by the train macro \n //");
2187
2188
2189 ofstream out2;
2190 out2.open(Form("%s_merge.C", kTrainName.Data()));
2191 if (out2.bad()) {
2192 return kFALSE;
2193 }
2194 out2 << st2 << endl;
2195 Printf("<<< Patching Merging Macro");
2196
2197
2198
2199 return kTRUE;
2200
2201}