3 void AddAnalysisTasks();
4 class AliAnalysisAlien;
5 AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode);
7 Int_t runNumbers[5] = {137844};
9 Bool_t doCDBconnect = 0;
11 Bool_t doVZERO = 0; // there is a 2nd file
13 Bool_t doSPD = 0; // needs RP
15 Bool_t doEventStat = 1;
16 Bool_t doSDD = 0; // needs RP
22 Bool_t doMUONTrig = 0;
23 Bool_t doImpParRes = 0;
27 Bool_t doCentrality = 1;
29 Bool_t doMUONEff = 0; // NEEDS geometry
30 Bool_t doV0 = 0; // NEEDS MCtruth
32 TString train_name = "QA"; // QA local folder name
33 TString train_tag = ""; // Train special tag appended to
34 // visible name. ("sim", "pp", ...)
35 // Name in train page (DON'T CHANGE)
36 TString visible_name = Form("QA$2_$3%s", train_tag.Data()); //# FIXED #
37 TString job_comment = "PWG1 QA train"; // Can add observations here
38 // Job tag (DON'T CHANGE)
39 TString job_tag = Form("%s: %s", visible_name.Data(), job_comment.Data());
40 // Package versions - Modify as needed
41 TString root_version = "v5-27-06b";
42 TString aliroot_version = "v4-21-09-AN";
43 // Production directory - change as needed for test mode
44 TString grid_datadir = "/alice/data/2010/LHC10h";
45 // Work directory in GRID (DON'T CHANGE)
46 TString grid_workdir = "/alice/cern.ch/user/a/alidaq/QA/QA$2";
48 Int_t grid_split = 10; // Splitting
50 Int_t debug_level = 1; // Debugging
51 // Data pattern - change as needed for test mode
52 TString data_pattern = "*ESDs/pass1/*ESDs.root";
53 // Output directory (DON'T CHANGE)
54 TString alien_outdir = "$1/QA$2";
55 // Input collection (production mode)
56 TString data_collection = "$1/qa1.xml";
57 TString mergeExcludes = ""; // Files to be excluded for merging
58 TString terminateFiles = "trending.root"; // Files produced during Terminate
60 Bool_t useProductionMode = kTRUE;
61 Bool_t useMergeViaJDL = kTRUE;
62 Bool_t useFastReadOption = kTRUE;
63 Bool_t useOverwriteMode = kTRUE;
64 Bool_t useDevelopmentVersion = kFALSE;
66 void PilotAnalysis(const char *plugin_mode = "full")
68 TString smode(plugin_mode);
70 if (smode == "test") useProductionMode = kFALSE;
71 if (!useProductionMode) {
72 TGrid::Connect("alien://");
73 if (!gGrid || !gGrid->IsConnected()) {
74 ::Error("PilotAnalysis", "No grid connection");
78 // Write configuration
79 TString cdir = gSystem->WorkingDirectory();
80 gSystem->MakeDirectory(train_name);
81 gSystem->ChangeDirectory(train_name);
83 out.open(Form("%sConfig.C",train_name.Data()), ios::out);
85 out << " train_name = " << "\"" << train_name.Data() << "\";" << endl;
86 out << " root_version = " << "\"" << root_version.Data() << "\";" << endl;
87 out << " aliroot_version = " << "\"" << aliroot_version.Data() << "\";" << endl;
88 out << " grid_datadir = " << "\"" << grid_datadir.Data() << "\";" << endl;
89 if (!alien_outdir.Length()) alien_outdir = Form("output_%s",train_name.Data());
90 out << " alien_outdir = " << "\"" << alien_outdir.Data() << "\";" << endl;
91 out << " doQAsim = " << doQAsym << ";" << endl;
92 out << " doVZERO = " << doVZERO << ";" << endl;
93 out << " doVertex = " << doVertex << ";" << endl;
94 out << " doSPD = " << doSPD << ";" << endl;
95 out << " doSDD = " << doSDD << ";" << endl;
96 out << " doSSDdEdx = " << doSSDdEdx << ";" << endl;
97 out << " doTPC = " << doTPC << ";" << endl;
98 out << " doTRD = " << doTRD << ";" << endl;
99 out << " doImpParRes = " << doImpParRes << ";" << endl;
100 out << " doMUON = " << doMUON << ";" << endl;
101 out << " doTOF = " << doTOF << ";" << endl;
102 out << " doHMPID = " << doHMPID << ";" << endl;
103 out << " doEventStat = " << doEventStat << ";" << endl;
104 out << " doCentrality = " << doCentrality << ";" << endl;
109 gSystem->SetIncludePath("-I. -I$ROOTSYS/include -I$ALICE_ROOT/include -I$ALICE_ROOT -I$ALICE_ROOT/ITS -I$ALICE_ROOT/TRD -I$ALICE_ROOT/PWG1");
112 AliAnalysisManager *mgr = new AliAnalysisManager("PilotAnalysis", "Production train");
113 mgr->SetNSysInfo(100);
114 mgr->SetDebugLevel(1);
116 AliESDInputHandlerRP *esdHandler = new AliESDInputHandlerRP();
117 esdHandler->SetReadFriends(kTRUE);
118 esdHandler->SetActiveBranches("ESDfriend");
119 mgr->SetInputEventHandler(esdHandler);
120 mgr->SetDebugLevel(debug_level);
125 AliAnalysisAlien *alienHandler = CreateAlienHandler(plugin_mode);
126 mgr->SetGridHandler(alienHandler);
127 if (mgr->InitAnalysis()) {
129 if (!strcmp(plugin_mode, "local")) mgr->StartAnalysis("local");
130 else mgr->StartAnalysis("grid");
136 gSystem->Load("libANALYSIS");
137 gSystem->Load("libANALYSISalice");
138 gSystem->Load("libCORRFW");
139 gSystem->Load("libTENDER");
140 gSystem->Load("libPWG0base.so");
141 gSystem->Load("libPWG0dep.so");
142 gSystem->Load("libPWG0selectors.so");
143 gSystem->Load("libPWG1.so");
144 gSystem->Load("libPWG2.so");
145 gSystem->Load("libPWG2forward.so");
148 gSystem->Load("libEMCALUtils");
149 gSystem->Load("libPWG4PartCorrBase");
150 gSystem->Load("libPWG4PartCorrDep");
153 gSystem->Load("libPWG3base");
154 gSystem->Load("libPWG3muon");
155 gSystem->Load("libPWG3muondep");
159 void AddAnalysisTasks()
161 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
162 mgr->SetCommonFileName("QAresults.root");
167 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskCDBconnect.C");
168 AliTaskCDBconnect *taskCDB = AddTaskCDBconnect();
169 if (!taskCDB) return;
170 taskCDB->SetRunNumber(runNumbers[0]);
174 // Event Statistics (Jan Fiete)
177 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
178 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kFALSE /*MC*/);
179 // mgr->RegisterExtraFile("event_stat.root");
180 if (!terminateFiles.IsNull()) terminateFiles += ",";
181 terminateFiles += "event_stat.root";
185 // Centrality (J. Thaeder)
188 gROOT->LoadMacro("$ALICE_ROOT/PWG1/Centrality/AddTaskHIMultCorr.C");
189 AliAnalysisTaskHIMultCorr *taskHIcentrality = AddTaskHIMultCorr();
192 // Vertexing (A. Dainese)
195 gROOT->LoadMacro("$ALICE_ROOT/PWG1/macros/AddTaskVertexESD.C");
196 AliAnalysisTaskVertexESD* taskvertexesd = AddTaskVertexESD();
197 taskvertexesd->SelectCollisionCandidates();
200 // TPC QA (E. Sicking)
203 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskQAsym.C");
204 AliAnalysisTaskSE * taskqasim = AddTaskQAsym(0);
205 taskqasim->SelectCollisionCandidates();
208 // VZERO QA (C. Cheshkov)
211 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskVZEROQA.C");
212 AliAnalysisTaskSE * taskv0qa = AddTaskVZEROQA(0);
213 // taskv0qa->SelectCollisionCandidates();
216 // TPC (Jacek Otwinowski & Michael Knichel)
219 gROOT->LoadMacro("$ALICE_ROOT/PWG1/TPC/macros/AddTaskPerformanceTPCdEdxQA.C");
220 AliPerformanceTask *tpcQA = AddTaskPerformanceTPCdEdxQA(kFALSE, kTRUE);
221 tpcQA->SelectCollisionCandidates();
224 // SPD (A. Mastroserio)
227 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskSPDQA.C");
228 AliAnalysisTaskSE* taskspdqa = AddTaskSPDQA();
229 taskspdqa->SelectCollisionCandidates();
235 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddSDDPoints.C");
236 AliAnalysisTaskSE* tasksdd = AddSDDPoints();
237 tasksdd->SelectCollisionCandidates();
240 // SSD dEdx (Marek Chojnacki)
243 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskdEdxSSDQA.C");
244 AliAnalysisTaskSE* taskssddedx = AddTaskdEdxSSDQA();
245 taskssddedx->SelectCollisionCandidates();
252 gROOT->LoadMacro("$ALICE_ROOT/PWG1/macros/AddTaskPerformanceITS.C");
253 AliAnalysisTaskITSTrackingCheck *itsQA = AddTaskPerformanceITS(kFALSE);
256 // TRD (Alex Bercuci, M. Fasel)
259 gROOT->LoadMacro("$ALICE_ROOT/PWG1/macros/AddTrainPerformanceTRD.C");
260 // steer individual TRD tasks
262 doCheckESD(kTRUE), // AliTRDcheckESD
263 doCheckDET(kTRUE), // AliTRDcheckDET
264 doEffic(kTRUE), // AliTRDefficiency
265 doResolution(kTRUE),// AliTRDresolution
266 doCheckPID(kTRUE), // AliTRDcheckPID
267 doV0Monitor(kFALSE);// AliTRDv0Monitor
268 AddTrainPerformanceTRD(Translate(doCheckESD, doCheckDET, doEffic, doResolution, doCheckPID, doV0Monitor));
272 // Calorimetry (Gustavo Conesa)
276 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/QA/AddTaskCalorimeterQA.C");
277 AliAnalysisTaskParticleCorrelation *taskCaloQA = AddTaskCalorimeterQA("ESD", kTRUE, kFALSE);
278 taskCaloQA->SetDebugLevel(0);
286 gROOT->LoadMacro("$ALICE_ROOT/PWG1/macros/AddTaskMTRchamberEfficiency.C");
287 AliAnalysisTaskTrigChEff *taskMuonTrig = AddTaskMTRchamberEfficiency();
295 gROOT->LoadMacro("$ALICE_ROOT/PWG3/muondep/AddTaskMUONTrackingEfficiency.C");
296 AliAnalysisTaskMuonTrackingEff *taskMuonTrackEff = AddTaskMUONTrackingEfficiency();
300 // V0-Decay Reconstruction (Ana Marin)
304 gROOT->LoadMacro("$ALICE_ROOT/PWG1/macros/AddTaskV0QA.C");
305 AliAnalysisTaskV0QA *taskv0QA = AddTaskV0QA(kFALSE);
308 // Impact parameter resolution (xianbao.yuan@pd.infn.it, andrea.dainese@pd.infn.it)
311 gROOT->LoadMacro("$ALICE_ROOT/PWG1/macros/AddTaskImpParRes.C");
312 // AliAnalysisTaskSE* taskimpparres= AddTaskImpParRes();
313 AliAnalysisTaskSE* taskimpparres= AddTaskImpParRes(kFALSE,-1,kFALSE,kFALSE);
314 taskimpparres->SelectCollisionCandidates();
317 // MUON QA (Philippe Pillot)
320 gROOT->LoadMacro("$ALICE_ROOT/PWG3/muon/AddTaskMuonQA.C");
321 AliAnalysisTaskSE* taskmuonqa= AddTaskMuonQA();
324 // TOF (Francesca Bellini)
327 gROOT->LoadMacro("$ALICE_ROOT/PWG1/TOF/AddTaskTOFQA.C");
328 AliAnalysisTaskTOFqa *tofQA = AddTaskTOFQA();
329 tofQA->SelectCollisionCandidates();
332 // HMPID QA (Giacomo Volpe)
335 gROOT->LoadMacro("$ALICE_ROOT/PWG1/HMPID/AddTaskHmpidQA.C");
336 AliAnalysisTaskSE* taskhmpidqa= AddTaskHmpidQA(kFALSE);
340 //______________________________________________________________________________
341 AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
343 // Check if user has a valid token, otherwise make one. This has limitations.
344 // One can always follow the standard procedure of calling alien-token-init then
345 // source /tmp/gclient_env_$UID in the current shell.
346 if (!AliAnalysisGrid::CreateToken()) return NULL;
347 AliAnalysisAlien *plugin = new AliAnalysisAlien();
348 // Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
349 plugin->SetRunMode(plugin_mode);
350 if (useProductionMode) {
351 plugin->SetProductionMode();
352 plugin->AddDataFile(data_collection);
354 plugin->SetJobTag(job_tag);
355 plugin->SetNtestFiles(5);
356 plugin->SetCheckCopy(kFALSE);
357 // plugin->SetOneStageMerging(kTRUE);
358 // Set versions of used packages
359 plugin->SetAPIVersion("V1.1x");
360 plugin->SetROOTVersion(root_version);
361 plugin->SetAliROOTVersion(aliroot_version);
362 // Declare input data to be processed.
363 // Method 1: Create automatically XML collections using alien 'find' command.
364 // Define production directory LFN
365 plugin->SetGridDataDir(grid_datadir);
366 // Set data search pattern
367 plugin->SetDataPattern(data_pattern);
368 // ...then add run numbers to be considered
369 // if (!iAODanalysis) plugin->SetRunRange(run_range[0], run_range[1]);
370 // plugin->SetOutputSingleFolder("output");
371 if (!useProductionMode) {
372 plugin->SetRunPrefix("000");
373 plugin->SetOutputToRunNo();
374 for (Int_t i=0; i<2; i++) {
375 if (!runNumbers[i]) break;
376 plugin->AddRunNumber(runNumbers[i]);
379 // Define alien work directory where all files will be copied. Relative to alien $HOME.
380 plugin->SetGridWorkingDir(grid_workdir);
381 // Declare alien output directory. Relative to working directory.
382 if (alien_outdir.IsNull()) alien_outdir = Form("output_%s",train_name.Data());
383 plugin->SetGridOutputDir(alien_outdir);
385 if (useDevelopmentVersion) {
386 plugin->EnablePackage("STEERBase");
387 plugin->EnablePackage("ESD");
388 plugin->EnablePackage("AOD");
389 plugin->EnablePackage("ANALYSIS");
390 plugin->EnablePackage("ANALYSISalice");
393 // Declare the analysis source files names separated by blancs. To be compiled runtime
394 // using ACLiC on the worker nodes.
395 // Declare all libraries (other than the default ones for the framework. These will be
396 // loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
397 plugin->AddIncludePath("-I. -I$ROOTSYS/include -I$ALICE_ROOT/include -I$ALICE_ROOT/ITS -I$ALICE_ROOT/TRD");
399 plugin->SetAdditionalLibs("libCORRFW.so libTENDER.so libPWG0base.so libPWG0dep.so libPWG0selectors.so libPWG1.so libPWG2.so \
400 libPWG2forward.so libEMCALUtils.so libPWG4PartCorrBase.so libPWG4PartCorrDep.so \
401 libPWG3base.so libPWG3muon.so libPWG3muondep.so");
403 // Declare the output file names separated by blancs.
404 // (can be like: file.root or file.root@ALICE::Niham::File)
405 plugin->SetDefaultOutputs();
406 plugin->SetMaxMergeFiles(20);
407 plugin->SetNrunsPerMaster(1);
409 // Put default output files to archive
410 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
411 TIter next(mgr->GetOutputs());
412 AliAnalysisDataContainer *output;
413 if (!mergeExcludes.IsNull()) plugin->SetMergeExcludes(mergeExcludes);
414 if (!terminateFiles.IsNull()) plugin->SetTerminateFiles(terminateFiles);
416 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
417 plugin->SetAnalysisMacro(Form("%s.C", train_name.Data()));
418 // Optionally set a name for the generated validation script
419 plugin->SetValidationScript("validation.sh");
420 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
421 plugin->SetSplitMaxInputFileNumber(grid_split);
422 // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
423 // plugin->SetMaxInitFailed(5);
424 // Optionally modify the number of replicas
425 plugin->SetNumberOfReplicas(4);
426 // Optionally resubmit threshold.
427 // plugin->SetMasterResubmitThreshold(90);
428 // Optionally set time to live (default 30000 sec)
429 plugin->SetTTL(70000);
430 // Optionally set input format (default xml-single)
431 plugin->SetInputFormat("xml-single");
432 // Optionally modify the name of the generated JDL (default analysis.jdl)
433 plugin->SetJDLName(Form("%s.jdl", train_name.Data()));
434 // Optionally modify the executable name (default analysis.sh)
435 plugin->SetExecutable(Form("%s.sh", train_name.Data()));
436 // Optionally modify job price (default 1)
438 // Optionally modify split mode (default 'se')
439 plugin->SetSplitMode("se");
440 plugin->SetExecutableCommand("aliroot -b -q");
442 plugin->SetMergeViaJDL(useMergeViaJDL);
443 // Use fastread option
444 plugin->SetFastReadOption(useFastReadOption);
446 plugin->SetOverwriteMode(useOverwriteMode);
447 /*********************************************************
448 *** PROOF MODE SPECIFIC SETTINGS ************
449 *********************************************************/
451 // plugin->SetProofCluster("alice-caf");
452 plugin->SetProofCluster("skaf.saske.sk");
453 // Dataset to be used
454 plugin->SetProofDataSet("/alice/data/LHC10e_000128175_p1#esdTree");
455 // May need to reset proof. Supported modes: 0-no reset, 1-soft, 2-hard
456 plugin->SetProofReset(0);
457 // May limit number of workers
458 plugin->SetNproofWorkers(20);
459 // May use a specific version of root installed in proof
460 plugin->SetRootVersionForProof("current_dbg");
461 // May set the aliroot mode. Check http://aaf.cern.ch/node/83
462 plugin->SetAliRootMode("ALIROOT"); // Loads AF libs by default
463 // May request ClearPackages (individual ClearPackage not supported)
464 plugin->SetClearPackages(kFALSE);
465 // Plugin test mode works only providing a file containing test file locations
466 plugin->SetFileForTestMode(gSystem->ExpandPathName("$ALICE_ROOT/PWG1/PilotTrain/files.txt"));