1 //===================== ANALYSIS TRAIN =========================================
2 // To use: copy this macro to your work directory, modify the global part to match
3 // your needs, then run root.
4 // root[0] .L AnalysisTrain.C
5 // Grid full mode as below (other modes: test, offline, submit, terminate)
6 // root[1] AnalysisTrainPWG-244Jets("grid", "full")
7 // CAF mode (requires root v5-23-02 + aliroot v4-16-Rev08)
8 // root[2] AnalysisTrainPWG4Jets("proof")
9 // Local mode requires AliESds.root or AliAOD.root in ./data directory
10 // root[3] AnalysisTrainPWG4Jets("local")
11 // In proof and grid modes, a token is needed and sourcing the produced environment file.
13 // If 'saveTrain' flag is set, the train will generate a directory name and run
14 // in this directory. A configuration file 'ConfigTrain.C' will be generated.
15 // One can replay at any time the train via:
16 // root[1] AnalysisTrainPWG4Jets(ana_mode, plugin_mode, "train_default_<date>/ConfigTrain.C")
18 // For Usage with fastjet run in "offline" first and then "submit"
19 // jdl and analysismacro are automatically patched after "offline" mode
21 // =============================================================================
22 // ### General Steering variables
23 // =============================================================================
24 //== general setup variables
25 TString kTrainName = "testAnalysis"; // *CHANGE ME* (no blancs or special characters)
26 TString kJobTag = "PWG4 Jet Tasks analysis train configured"; // *CHANGE ME*
28 // Usage of par files ONLY in grid mode and ONLY if the code is not available
29 // in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
30 // To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
32 Bool_t kUsePAR = kFALSE; // use par files for extra libs
33 Bool_t kUseCPAR = kFALSE; // use par files for common libs
34 Bool_t kFillAOD = kTRUE; // switch of AOD filling for on the fly analysis
35 Bool_t kFilterAOD = kTRUE;
36 Int_t kSaveAOD = 8; // Bit switch 1 = Full AOD 2 = Jet AOD , 4 = PartCorr, 8 = JCORRAN
37 //== general input and output variables
39 Int_t iAODanalysis = 1; // Analysis on input AOD's
40 Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
41 Int_t iCentralitySelection = 0; // Use the centrality
42 Int_t iESDfilter = 0; // ESD to AOD filter (barrel + muon tracks)
43 Int_t iPhysicsSelection = 1; // ESD to AOD filter (barrel + muon tracks)
44 UInt_t iPhysicsSelectionFlag = 1; // set by pyshics selection and passed to the task, kMB, kUserDefined etc
45 Bool_t useTender = kFALSE; // use tender wagon
46 Bool_t kUseKinefilter = kFALSE; // use Kinematics filter
47 Bool_t kUseMuonfilter = kFALSE; // use Kinematics filter
48 TString kCommonOutputFileName = "PWG4_JetTasksOutput.root";
49 TString kCaloQAOutputFileName = "PWG4_CaloQAOutput.root";
52 //== general process variables
54 // ### Other flags to steer the analysis
55 //==============================================================================
56 Bool_t kSkipTerminate = kTRUE; // Do not call Teminate
57 Bool_t kUseDate = kFALSE; // use date in train name
58 Bool_t kUseDebug = kTRUE; // activate debugging
59 Int_t kErrorIgnoreLevel = -1; // takes the errror print level from .rootrc
61 // const Int_t kUnset = -1;
62 // const Int_t kPrint = 0;
63 // const Int_t kInfo = 1000;
64 // const Int_t kWarning = 2000;
65 // const Int_t kError = 3000;
66 // const Int_t kBreak = 4000;
67 // const Int_t kSysError = 5000;
68 // const Int_t kFatal = 6000;
69 Int_t kUseSysInfo = 0; // activate debugging
70 Long64_t kNumberOfEvents = 1234567890; // number of events to process from the chain
71 Bool_t kUseMC = kTRUE; // use MC info
72 Bool_t kIsMC = kTRUE; // is MC info, if false it overwrites Use(AOD)MC
73 Bool_t kUseAODMC = kTRUE; // use MC infA
74 Bool_t kUseESDTags = kFALSE; // use ESD tags for selection
75 Bool_t kUseTR = kFALSE; // use track references
76 Bool_t kUseAODTags = kFALSE; // use AOD tags
77 Bool_t kSaveTrain = kFALSE; // save train configuration as:
78 Bool_t kIsPbPb = kFALSE; // Pb+Pb
81 // ### Analysis modules to be included. Some may not be yet fully implemented.
82 //==============================================================================
83 Int_t iJETAN = 1; // Jet analysis (PWG4) // 1 write standard 2 write non-standard jets, 3 wrtie both
84 Int_t iJETSUBTRACT = 1; // Jet background subtration
85 TList kJetListSpectrum; // list of jets contains TObjString of possible jet finder names
86 TExMap kJetMapSpectrum; // Maps the jet finder pairs to be used in the spectrum task second number negative no pair other wise (j1+1) + (1000 * (j2+1)) +10000 * (j3+1)
87 TExMap kJetBackMapSpectrum; // Maps the jet finder pairs with the background branch used, just for countint of trackrefs
88 Int_t kJetMapOffset[3] = {10000,100,1};
89 TString kDefaultJetBranch = ""; // is currently set when filled (iJETAN or clusters) or from config macro
90 TString kDefaultJetBackgroundBranch = ""; // is currently set when filled (jet clsuters
91 TString kDefaultJetBackgroundBranchCut1 = ""; // is currently set when filled (jet clsuters
92 TString kDefaultJetBackgroundBranch_extra = ""; // is currently set when filled (jet clsuters)
93 TString kJetSubtractBranches = ""; // is currently set when filled (jet clsuters
94 TString kJetSubtractBranchesCut1 = ""; // is currently set when filled (jet clsuters
95 TString kJetSubtractBranches_extra = ""; // is currently set when filled (jet clsuters
97 TString kDefaultJetBranchMC = ""; // is currently set when filled (iJETAN or clusters) or from config macro
98 TString kDefaultJetBackgroundBranchMC = ""; // is currently set when filled (jet clsuters
99 TString kDefaultJetBranchMC2 = ""; // is currently set when filled (iJETAN or clusters) or from config macro
100 TString kDefaultJetBackgroundBranchMC2 = ""; // is currently set when filled (jet clsuters
101 TString kJetSubtractMask1 = "B0";
102 TString kJetSubtractMask2 = "B%d";
105 Int_t iPWG1QASym = 0; // Eva's QA task compiled on the fly...
106 Int_t iPWG4FastEmbedding = 0; // Generate non-standard AOD for embedding
107 Int_t iPWG4JetTasks = 0; // all jet tasks flag for lib laoding
108 Int_t iPWG4JetServices = 0; // jet spectrum analysis
109 Int_t iPWG4JetSpectrum = 0; // jet spectrum analysis
110 Int_t iPWG4JetResponse = 0; // jet response matrix
111 Int_t iPWG4JCORRAN = 0; // JCORRAN module
112 Int_t iPWG4UE = 0; // Underlying Event analysis
113 Int_t iPWG4LeadingUE = 0; // Underlying Event analysis
114 Int_t iPWG4CorrectionsUE = 0; // Underlying Event analysis
115 Int_t iPWG4TmpSourceSara = 0; // Underlying Event analysis not in svn
116 Int_t iPWG4Fragmentation = 1; // Official Fragmentation
117 Int_t iPWG4JetChem = 0; // Jet chemistry
118 Int_t iPWG4PtQAMC = 0; // Marta's QA tasks
119 Int_t iPWG4PtTrackQA = 0; // Marta's QA tasks
120 Int_t iPWG4PtSpectra = 0; // Marta's QA tasks
121 Int_t iPWG4PtQATPC = 0; // Marta's QA tasks
122 Int_t iPWG4Cosmics = 0; // Marta's Cosmics Taks
123 Int_t iPWG4ThreeJets = 0; // Sona's thrust task
124 Int_t iPWG4QGSep = 0; // Sona's QG Separation task
125 Int_t iPWG4Minijet = 0; // Eva's Mini Jet Task cluster task
126 Int_t iPWG4KMeans = 0; // Andreas' KMeans task
127 Int_t iPWG4Cluster = 0; // CKB cluster task
128 Int_t iEMCUtilLibs = 0; // Flag to satisfy dependence on EMC utils
129 Int_t iPWG4PartCorrLibs = 0; // Gustavo's part corr analysis
130 Int_t iPWG4PartCorr = 0; // Gustavo's part corr analysis
131 Int_t iPWG4CaloQA = 0; // Gustavo's part corr analysis
132 Int_t iPWG4JetCorr = 0; // Paul's jet corr analysis
133 Int_t iPWG4Tagged = 0; // Gustavo's part corr analysis
134 Int_t iPWG4omega3pi = 0; // Omega to 3 pi analysis (PWG4)
135 Int_t iPWG4GammaConvLib = 0; // Gamma Conversio
136 Int_t iPWG4GammaConv = 0; // Gamma Conversio
137 Int_t iPWG4CaloConv = 0; // Gamma Conversio
138 Int_t kHighPtFilterMask = 32; // change depending on the used AOD Filter
139 TString kDeltaAODJetName = "AliAOD.Jets.root";
140 TString kDeltaAODJetNameInput = "";
141 TString kDeltaAODJCORRANName = "AliAOD.JCORRAN.root";
142 TString kDeltaAODPartCorrName = "AliAOD.PartCorr.root";
143 TString kFastEmbeddingAOD = "emb/AliAOD.root";
144 TString kFastEmbAODList = "";
146 //==============================================================================
147 // ### PROOF Steering varibales
148 //==============================================================================
149 //== proof setup variables
150 TString kProofCluster = "alicecaf.cern.ch";
151 Bool_t kProofUseAFPAR = kFALSE; // use AF special par file
152 TString kProofAFversion = "AF-v4-17";
153 //== proof input and output variables
154 TString kProofDataSet = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
155 Bool_t kProofSaveToAlien = kFALSE; // save proof outputs in AliEn train_[trainName]_ddMonthyyyy_time.C
156 TString kProofOutdir = "";
157 Bool_t kProofClearPackages = kFALSE;
158 Int_t kProofEvents = 10000;
159 Int_t kProofOffset = 0;
160 //== proof process variables
163 //==============================================================================
164 // ### Grid plugin Steering varibiables
165 //==============================================================================
166 //== grid plugin setup variables
167 Bool_t kPluginUse = kTRUE; // do not change
168 Bool_t kPluginUseProductionMode = kFALSE; // use the plugin in production mode
169 TString kPluginRootVersion = "v5-28-00c"; // *CHANGE ME IF MORE RECENT IN GRID*
170 TString kPluginAliRootVersion = "v4-21-01a-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
171 Bool_t kPluginMergeViaJDL = kTRUE; // merge via JDL
172 Bool_t kPluginFastReadOption = kFALSE; // use xrootd tweaks
173 Bool_t kPluginOverwriteMode = kTRUE; // overwrite existing collections
174 Int_t kPluginOutputToRunNumber = 1; // write the output to subdirs named after run number
175 // TString kPluginExecutableCommand = "root -b -q";
176 TString kPluginExecutableCommand = "source /Users/kleinb/setup_32bit_aliroot_trunk_clean_root_trunk.sh; alienroot -b -q ";
178 // == grid plugin input and output variables
179 TString kGridDatadir = "/alice/sim/PDC_08b/LHC09a1/AOD/";
180 Int_t kGridMaxRunsFromList = 999999999;
181 Int_t kGridOffsetRunFromList = 0; // skip the first n runs from the list
182 TString kGridLocalRunList = "";
183 TString kGridOutdir = ""; // AliEn output directory. If blank will become output_<kTrainName>
184 TString kGridDataSet = ""; // sub working directory not to confuse different run xmls
185 TString kGridExtraAliendirLevel = ""; // sub working directory not to confuse different run xmls
186 Int_t kGridRunRange[2] = {0, -1}; // Set the run range
187 TString kGridRunPattern = "%03d"; // important for leading zeroes!!
188 TString kGridPassPattern = "";
189 TString kGridExtraFiles = ""; // files that will be added to the input list in the JDL...
190 Int_t kGridMaxMergeFiles = 25; // Number of files merged in a chunk grid run range
191 TString kGridMergeExclude = "AliAOD.root"; // Files that should not be merged
192 TString kGridOutputStorages = "disk=2"; // Make replicas on the storages
193 // == grid process variables
194 Int_t kGridRunsPerMaster = 100; // Number of runs per master job
195 Int_t kGridFilesPerJob = 100; // Maximum number of files per job (gives size of AOD)
197 //==============================================================================
198 // ### Local Steering variables
199 //==============================================================================
200 //== local setup variables
201 //== local input and output variables
202 TString kLocalXMLDataset = ""; // Change local xml dataset for local interactive analysis
203 TString kLocalDataList = "local_deltaaod.txt"; // Change local xml dataset for local interactive analysis
204 // == local process variables
206 TString kPluginMode = "";
207 TString kAnalysisMode = "";
211 TString anaPars = "";
212 TString anaLibs = "";
213 TString anaLibsExtra = "";
214 TString anaSources = "";
215 // Function signatures
216 class AliAnalysisAlien;
217 class AliAnalysisManager;
219 //______________________________________________________________________________
220 void AnalysisTrainPWG4Jets(const char *analysis_mode="local",
221 const char *plugin_mode="",
222 const char *config_file="",Int_t iOffset = 0,Int_t iTotal = 0)
224 // Main analysis train macro. If a configuration file is provided, all parameters
225 // are taken from there but may be altered by CheckModuleFlags.
227 // these flag may be needed by the config file
228 kPluginMode = plugin_mode;
229 kAnalysisMode = analysis_mode;
231 if (strlen(config_file) && !LoadConfig(config_file)) return;
232 if(iTotal>0)kGridMaxRunsFromList = iTotal; // overwrites the settings from config file
233 if(iOffset)kGridOffsetRunFromList = iOffset;
234 if(iOffset)kProofOffset = iOffset;
237 TString smode(analysis_mode);
239 if (kSaveTrain)WriteConfig();
240 // Check compatibility of selected modules
241 CheckModuleFlags(smode);
242 // gROOT->ProcessLine(".trace");
244 printf("==================================================================\n");
245 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", kTrainName.Data(),smode.Data());
246 printf("==================================================================\n");
247 printf("= Configuring analysis train for: =\n");
248 if (iAODanalysis) printf("= AOD analysis =\n");
249 else printf("= ESD analysis =\n");
250 if (iPhysicsSelection) printf("= Physics selection =\n");
251 if(iCentralitySelection)printf("= Centrality selection =\n");
252 if (useTender) printf("= Using tender =\n");
253 if (iESDfilter) printf("= ESD filter =\n");
254 if (iJETAN) printf("= Jet analysis =\n");
255 printf("==================================================================\n");
257 char *printMask = ":: %20s %10d\n";
258 printf(printMask,"Fill AOD",(UInt_t)kFillAOD);
259 printf(printMask,"Save AOD", (UInt_t)kSaveAOD);
260 printf(printMask,"MC truth", (UInt_t)kUseMC);
261 printf(printMask,"KINE filter", (UInt_t)kUseKinefilter);
262 printf(printMask,"track refs", (UInt_t)kUseTR);
263 printf(printMask,"tags", (UInt_t)kUseESDTags);
264 printf(printMask,"AOD tags", (UInt_t)kUseAODTags);
265 printf(printMask,"debugging", (UInt_t)kUseDebug);
266 printf(printMask,"PAR files", (UInt_t)kUsePAR);
267 printf(printMask,"AliEn plugin", (UInt_t)kPluginUse);
268 printf(printMask,"JETAN subtract", (UInt_t)iJETSUBTRACT);
269 printf(printMask,"PWG1 QA sym", iPWG1QASym);
270 printf(printMask,"PWG4 Source Sara",iPWG4TmpSourceSara);
271 printf(printMask,"PWG4 Fragmentation",iPWG4Fragmentation);
272 printf(printMask,"PWG4 Jet Chem",iPWG4JetChem);
273 printf(printMask,"PWG4 Jet tasks",iPWG4JetTasks);
274 printf(printMask,"PWG4 Jet Services",iPWG4JetServices);
275 printf(printMask,"PWG4 Jet Spectrum",iPWG4JetSpectrum);
276 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
277 printf(printMask,"PWG4 UE",iPWG4UE);
278 printf(printMask,"PWG4 Leading UE",iPWG4LeadingUE);
279 printf(printMask,"PWG4 Corrections UE",iPWG4CorrectionsUE);
280 printf(printMask,"PWG4 Pt QA MC",iPWG4PtQAMC);
281 printf(printMask,"PWG4 Pt QA track",iPWG4PtTrackQA);
282 printf(printMask,"PWG4 Pt Spectra",iPWG4PtSpectra);
283 printf(printMask,"PWG4 Pt QA TPC",iPWG4PtQATPC);
284 printf(printMask,"PWG4 Cosmics",iPWG4Cosmics);
285 printf(printMask,"PWG4 Three Jets",iPWG4ThreeJets);
286 printf(printMask,"PWG4 QGSep",iPWG4QGSep);
287 printf(printMask,"PWG4 Minijet",iPWG4Minijet);
288 printf(printMask,"PWG4 KMeans",iPWG4KMeans);
289 printf(printMask,"PWG4 Cluster",iPWG4Cluster);
290 printf(printMask,"PWG4 Part Corr",iPWG4PartCorr);
291 printf(printMask,"PWG4 Calo QA",iPWG4CaloQA);
292 printf(printMask,"PWG4 Jet Corr",iPWG4JetCorr);
293 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
294 printf(printMask,"PWG4 Tagged",iPWG4Tagged);
295 printf(printMask,"PWG4 omega to 3 pi ",iPWG4omega3pi);
296 printf(printMask,"PWG4 Gamma Conv",iPWG4GammaConv);
297 printf(printMask,"PWG4 Calo Conv",iPWG4CaloConv);
298 printf(printMask,"HighPt FilterMask",kHighPtFilterMask);
300 //==========================================================================
301 // Connect to back-end system
302 if (!Connect(smode)) {
303 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
307 // Load common libraries and set include path
308 if (!LoadCommonLibraries(smode)) {
309 ::Error("AnalysisTrain", "Could not load common libraries");
315 // Make the analysis manager and connect event handlers
316 AliAnalysisManager *mgr = new AliAnalysisManager("PWG4Train", "pwg4 mini train");
317 if (kCommonOutputFileName.Length()>0)mgr->SetCommonFileName(kCommonOutputFileName.Data());
318 if (kProofSaveToAlien) mgr->SetSpecialOutputLocation(kProofOutdir);
320 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
321 if (kUseSysInfo)mgr->SetNSysInfo(kUseSysInfo);
322 mgr->SetSkipTerminate(kSkipTerminate);
324 // Load analysis specific libraries
325 if (!LoadAnalysisLibraries(smode)) {
326 ::Error("AnalysisTrain", "Could not load analysis libraries");
330 // Create input handler (input container created automatically)
333 AliAODInputHandler *aodH = new AliAODInputHandler();
334 mgr->SetInputEventHandler(aodH);
335 if (kDeltaAODJetNameInput.Length()){
336 Printf("Adding Friend %s",kDeltaAODJetNameInput.Data());
337 aodH->AddFriend(kDeltaAODJetNameInput.Data());
339 // if (iPWG4PartCorr) aodH->AddFriend(Form("deltas/%s"kDeltaAODJetName.Data()));
342 AliESDInputHandler *esdHandler = new AliESDInputHandler();
343 if (kUseESDTags) esdHandler->SetReadTags();
344 esdHandler->SetReadFriends(kFALSE);
345 mgr->SetInputEventHandler(esdHandler);
346 // if(iPWG4PtQATPC&& !kTrainName.Contains("pass5"))esdHandler->SetActiveBranches("ESDfriend");
350 // Monte Carlo handler
351 if (kUseMC && !iAODanalysis) {
352 AliMCEventHandler* mcHandler = new AliMCEventHandler();
353 mgr->SetMCtruthEventHandler(mcHandler);
354 mcHandler->SetReadTR(kUseTR);
356 // AOD output container, created automatically when setting an AOD handler
358 // AOD output handler
359 AliAODHandler* aodHandler = new AliAODHandler();
360 aodHandler->SetOutputFileName("AliAOD.root");
361 aodHandler->SetFillAODforRun(kFillAOD);
363 mgr->SetOutputEventHandler(aodHandler);
364 AliAnalysisDataContainer * cout_aod = mgr->GetCommonOutputContainer();
365 cout_aod->SetSpecialOutput();
367 // Debugging if needed
370 mgr->SetDebugLevel(3);
373 mgr->RegisterExtraFile("syswatch.root");
374 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
375 kGridMergeExclude += "syswatch.root";
378 AliLog::SetGlobalLogLevel(AliLog::kError);
382 //==========================================================================
383 // Create the chain. In this example it is created only from ALIEN files but
384 // can be done to work in batch or grid mode as well.
385 TChain *chain = CreateChain(smode, plugin_mode);
387 //==========================================================================
388 // Load the tasks configuration macros for all wagons. These files are supposed now to be
389 // in the current workdir, but in AliEn they will be in the file catalog,
390 // mapped from AliRoot and pecified in the jdl input list.
392 // For now connection to top input container and common AOD output container
393 // is done in this macro, but in future these containers will be connected
394 // from each task configuration macro.
397 // Tender and supplies. Needs to be called for every event.
401 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/TenderSupplies/AddTaskTender.C");
402 AliAnalysisTaskSE *tender = AddTaskTender(kTRUE);
403 // tender->SelectCollisionCandidates();
404 tender->SetDebugLevel(2);
408 Float_t fTrackEtaWindow = 0.9;
409 Float_t fJetEtaWindow = 0.5;
412 if(kIsPbPb){// for pass1
413 Float_t fTrackEtaWindow = 0.8;
414 Float_t fJetEtaWindow = 0.4;
419 if(iPhysicsSelection && !iAODanalysis){
420 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
421 Int_t iTriggerHIC = 0;
422 Bool_t rejectBkg = true;
425 rejectBkg = false; // for the moment...
427 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kIsMC,rejectBkg);
429 mgr->RegisterExtraFile("EventStat_temp.root");
430 mgr->AddStatisticsTask();
433 iPhysicsSelectionFlag = AliVEvent::kMB;
436 if(iCentralitySelection){
438 // has to run before AOD filter
439 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskCentrality.C");
440 // const char* file1="$ALICE_ROOT/ANALYSIS/macros/AliCentralityBy1D_137161.root";
441 // const char* file2="$ALICE_ROOT/ANALYSIS/macros/AliCentralityByFunction_137161.root";
442 AliCentralitySelectionTask *taskC = AddTaskCentrality();
443 if (!taskC) ::Warning("AnalysisTrainPWG4Jets", "AliCentralitySelectionTask cannot run for this train conditions - EXCLUDED");
446 if (iESDfilter && !iAODanalysis) {
447 // ESD filter task configuration.
448 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskESDFilterPWG4Train.C");
449 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilter(kUseKinefilter,kUseMuonfilter);
450 taskesdfilter->SetEnableFillAOD(!kFilterAOD);
451 taskesdfilter->DisableV0s();
452 taskesdfilter->DisableCascades();
453 taskesdfilter->DisableKinks();
454 taskesdfilter->DisablePmdClusters();
455 taskesdfilter->DisableCaloClusters();
456 taskesdfilter->DisableCells();
459 mgr->RegisterExtraFile("pyxsec_hists.root");
460 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
461 kGridMergeExclude += "pyxsec_hists.root";
468 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
469 mgr->AddTask(tagTask);
470 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
471 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
472 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
473 mgr->ConnectOutput(tagTask, 1, coutTags);
476 if (iPWG4FastEmbedding) {
477 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFastEmbedding.C");
478 AliAnalysisTaskFastEmbedding *taskEmbedding = 0;
479 if(kFastEmbAODList.Length()) taskEmbedding = AddTaskFastEmbedding(kFastEmbAODList, 1);
480 else taskEmbedding = AddTaskFastEmbedding(kFastEmbeddingAOD, 0);
481 taskEmbedding->SetJetBranch("jetsAOD_UA104_B0_Filter00256_Cut01000");
482 // taskEmbedding->SetEvtSelecMode(AliAnalysisTaskFastEmbedding::kEventsAll);
483 // taskEmbedding->SetDebugLevel(10);
488 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJets.C");
489 AliAnalysisTaskJets *taskjets = 0;
492 taskjets = AddTaskJets(kHighPtFilterMask);
493 taskjets->SetName("StandardJets");
494 taskjets->SetNonStdBranch("");
498 // Set only few jet finders backgroudn subtraction w an wo
500 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
501 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
503 cTmp = taskjets->GetNonStdBranch();
504 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
506 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,2.,0); // no background subtraction
507 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
509 cTmp = taskjets->GetNonStdBranch();
510 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
513 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
515 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
516 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
517 cTmp = taskjets->GetNonStdBranch();
518 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
519 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,2.,2); // background subtraction
520 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
521 cTmp = taskjets->GetNonStdBranch();
522 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
528 taskjets = AddTaskJets("AOD","SISCONE",0.4,kHighPtFilterMask,0.15,0); //no background subtraction to be done later....
529 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
530 cTmp = taskjets->GetNonStdBranch();
531 if(cTmp.Length()>0)kJetSubtractBranches += Form("%s ",cTmp.Data());
532 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
535 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
537 taskjets = AddTaskJets("AODMC","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
538 cTmp = taskjets->GetNonStdBranch();
539 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
540 taskjets = AddTaskJets("AODMC2","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
541 cTmp = taskjets->GetNonStdBranch();
542 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
545 taskjets = AddTaskJets("AODMC","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
546 cTmp = taskjets->GetNonStdBranch();
547 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
548 taskjets = AddTaskJets("AODMC2","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
549 cTmp = taskjets->GetNonStdBranch();
550 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
553 if(kDeltaAODJetName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJetName.Data());
555 if (!taskjets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
559 if (iPWG4FastEmbedding && iJETAN) {
560 AliAnalysisTaskJets *taskEmbJets = AddTaskJets("AODextra", "FASTJET", 0.4, kHighPtFilterMask);
561 taskEmbJets->ReadAODFromOutput();
562 kJetSubtractBranches_extra += Form("%s ", taskEmbJets->GetNonStdBranch());
564 taskEmbJets = AddTaskJets("AODextraonly", "FASTJET", 0.4, kHighPtFilterMask);
565 taskEmbJets->ReadAODFromOutput();
567 taskEmbJets = AddTaskJets("AODextra", "UA1", 0.4, kHighPtFilterMask,1.,0);
568 taskEmbJets->ReadAODFromOutput();
569 taskEmbJets = AddTaskJets("AODextraonly", "UA1", 0.4, kHighPtFilterMask,1.,0);
570 taskEmbJets->ReadAODFromOutput();
571 taskEmbJets = AddTaskJets("AODextra", "UA1", 0.4, kHighPtFilterMask,1.,2);
572 taskEmbJets->ReadAODFromOutput();
576 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCluster.C");
577 AliAnalysisTaskJetCluster *taskCl = 0;
587 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,0); // this one is for the background and random jets, random cones with no skip
588 taskCl->SetBackgroundCalc(kTRUE);
589 taskCl->SetNRandomCones(1);
590 // taskCl->SetDebugLevel(11);
591 taskCl->SetCentralityCut(fCenLo,fCenUp);
592 taskCl->SetGhostEtamax(fTrackEtaWindow);
593 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
594 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
595 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),0)));
596 kJetListSpectrum.Add(new TObjString(Form("%sRandomCone_random",taskCl->GetJetOutputBranch())));
598 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),2.0,fTrackEtaWindow,0); // this one is for the background and random jets, random cones with no skip
599 taskCl->SetNRandomCones(1);
600 taskCl->SetBackgroundCalc(kTRUE);
601 taskCl->SetCentralityCut(fCenLo,fCenUp);
602 taskCl->SetGhostEtamax(fTrackEtaWindow);
603 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
604 kDefaultJetBackgroundBranchCut1 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
605 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
606 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),0)));
607 kJetListSpectrum.Add(new TObjString(Form("%sRandomCone_random",taskCl->GetJetOutputBranch())));
609 if (iPWG4FastEmbedding) {
610 AliAnalysisTaskJetCluster *taskClEmb = 0;
611 taskClEmb = AddTaskJetCluster("AODextra","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
612 taskClEmb->SetBackgroundCalc(kTRUE);
613 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
614 taskClEmb->SetGhostEtamax(fTrackEtaWindow);
615 if(iAODanalysis==2)taskClEmb->SetAODTrackInput(kTRUE);
616 kDefaultJetBackgroundBranch_extra = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskClEmb->GetJetOutputBranch());
618 taskClEmb = AddTaskJetCluster("AODextraonly","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
619 taskClEmb->SetBackgroundCalc(kFALSE);
620 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
621 taskClEmb->SetGhostEtamax(fTrackEtaWindow);
622 if(iAODanalysis==2)taskClEmb->SetAODTrackInput(kTRUE);
624 taskClEmb = AddTaskJetCluster("AODextra","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow);
625 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
626 taskClEmb->SetBackgroundBranch(kDefaultJetBackgroundBranch_extra.Data());
627 kJetSubtractBranches_extra += Form("%s ",taskClEmb->GetJetOutputBranch());
628 if(iAODanalysis==2)taskClEmb->SetAODTrackInput(kTRUE);
630 taskClEmb = AddTaskJetCluster("AODextraonly","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow);
631 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
632 if(iAODanalysis==2)taskClEmb->SetAODTrackInput(kTRUE);
635 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.2,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
636 taskCl->SetBackgroundCalc(kTRUE);
637 taskCl->SetCentralityCut(fCenLo,fCenUp);
638 taskCl->SetGhostEtamax(fTrackEtaWindow);
639 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
640 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
643 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1,kDeltaAODJetName.Data(),0.15); // this one is for the background jets
644 taskCl->SetBackgroundCalc(kTRUE);
645 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
646 taskCl->SetGhostEtamax(fTrackEtaWindow);
647 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
648 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
650 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1,kDeltaAODJetName.Data(),0.15);
651 taskCl->SetBackgroundCalc(kTRUE);
652 taskCl->SetGhostEtamax(fTrackEtaWindow);
653 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
654 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
657 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,2,1,kDeltaAODJetName.Data(),0.15);
658 taskCl->SetCentralityCut(fCenLo,fCenUp);
659 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
660 taskCl->SetCentralityCut(fCenLo,fCenUp);
661 // taskCl->SetDebugLevel(3);
663 taskCl->SetNRandomCones(1);
664 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
665 kDefaultJetBranch = taskCl->GetJetOutputBranch();
666 kJetSubtractBranches += Form("%s ",taskCl->GetJetOutputBranch());
667 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
668 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),2)));
669 kJetListSpectrum.Add(new TObjString(Form("%sRandomCone_random",taskCl->GetJetOutputBranch())));
671 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,2,1,kDeltaAODJetName.Data(),2.0);
672 taskCl->SetCentralityCut(fCenLo,fCenUp);
673 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
674 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchCut1.Data());
675 kJetSubtractBranchesCut1 += Form("%s ",taskCl->GetJetOutputBranch());
676 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
679 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.2,0,1,kDeltaAODJetName.Data(),0.15);
680 taskCl->SetCentralityCut(fCenLo,fCenUp);
681 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
682 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
683 kJetSubtractBranches += Form("%s ",taskCl->GetJetOutputBranch());
684 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
687 if(kDeltaAODJetName.Length()==0&&kFilterAOD){
688 if(kIsPbPb)taskCl->SetJetTriggerPtCut(0.0001);
689 else taskCl->SetJetTriggerPtCut(20.);
694 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
695 taskCl->SetBackgroundCalc(kTRUE);
696 taskCl->SetGhostEtamax(0.9);
697 kDefaultJetBackgroundBranchMC = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
698 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
699 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
701 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
702 taskCl->SetBackgroundCalc(kTRUE);
703 taskCl->SetGhostEtamax(fTrackEtaWindow);
704 kDefaultJetBackgroundBranchMC2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch(),fTrackEtaWindow);
705 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
706 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
709 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
710 taskCl->SetBackgroundCalc(kTRUE);
711 taskCl->SetGhostEtamax(fTrackEtaWindow);
712 kDefaultJetBackgroundBranchMC = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
713 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
715 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow); // this one is for the background and random jets
716 taskCl->SetBackgroundCalc(kTRUE);
717 taskCl->SetGhostEtamax(fTrackEtaWindow);
718 kDefaultJetBackgroundBranchMC2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
719 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
720 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
721 // pp background calcs...
724 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow);
725 taskCl->SetGhostEtamax(fTrackEtaWindow);
726 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC.Data());
727 kDefaultJetBranchMC = taskCl->GetJetOutputBranch();
728 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
729 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
731 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow);
732 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC2.Data());
733 kDefaultJetBranchMC2 = taskCl->GetJetOutputBranch();
734 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
735 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
739 if (!taskCl) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCluster cannot run for this train conditions - EXCLUDED");
744 if(iJETSUBTRACT&&kJetSubtractBranches.Length()){
745 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetBackgroundSubtract.C");
746 AliAnalysisTaskJetBackgroundSubtract *taskSubtract = 0;
747 if(kJetSubtractBranches.Length()){
752 for(int iB = 1;iB<3;iB++){
754 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches,iB,kJetSubtractMask1.Data(),kJetSubtractMask2.Data());
755 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data()); taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
756 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
757 // taskSubtract->SetDebugLevel(10);
759 TObjArray *objArr = kJetSubtractBranches.Tokenize(" ");
760 for(int iJB = 0;iJB<objArr->GetEntries();iJB++){
761 TObjString *ostr = (TObjString*)objArr->At(iJB);
762 cTmp = ostr->GetString().Data();
763 cTmp.ReplaceAll(kJetSubtractMask1.Data(),Form(kJetSubtractMask2.Data(),iB));
764 kJetListSpectrum.Add(new TObjString(cTmp.Data()));
767 // taskSubtract->SetDebugLevel(3);
769 if(kJetSubtractBranches.Contains(kDefaultJetBranch.Data())&&kIsPbPb){
770 kDefaultJetBranch.ReplaceAll(taskSubtract->GetToReplace(),Form(taskSubtract->GetReplacementMask(),taskSubtract->GetSubtractionMethod()));
779 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranchesCut1,iB,kJetSubtractMask1.Data(),kJetSubtractMask2.Data(),"Cut2000");
780 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranchCut1.Data());
781 taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
782 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
784 objArr = kJetSubtractBranchesCut1.Tokenize(" ");
785 for(int iJB = 0;iJB<objArr->GetEntries();iJB++){
786 TObjString *ostr = (TObjString*)objArr->At(iJB);
787 cTmp = ostr->GetString().Data();
788 cTmp.ReplaceAll(kJetSubtractMask1.Data(),Form(kJetSubtractMask2.Data(),iB));
789 kJetListSpectrum.Add(new TObjString(cTmp.Data()));
794 if(kJetSubtractBranches_extra.Length()){
795 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches_extra,2,kJetSubtractMask1.Data(),kJetSubtractMask2.Data(),"extra");
796 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch_extra.Data());
797 taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
798 //taskSubtract->SetDebugLevel(3);
799 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
800 if(kJetSubtractBranches_extra.Contains(kDefaultJetBranch.Data())){
801 kDefaultJetBranch.ReplaceAll(taskSubtract->GetToReplace(),Form(taskSubtract->GetReplacementMask(),taskSubtract->GetSubtractionMethod()));
804 if (!taskSubtract) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetBackgroundSubtrac cannot run for this train conditions - EXCLUDED");
808 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskDiJets.C");
809 AliAnalysisTaskDiJets *taskdijets = 0;
810 if(iDIJETAN&1)taskdijets = AddTaskDiJets();
811 if (!taskdijets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
813 taskdijets = AddTaskDiJets("jetsAOD_CDF07");
814 taskdijets = AddTaskDiJets("jetsAOD_DA07");
815 taskdijets = AddTaskDiJets("jetsAOD_FASTJET07");
816 taskdijets = AddTaskDiJets("jetsAOD_FASTKT07");
817 taskdijets = AddTaskDiJets("jetsAOD_SISCONE07");
818 taskdijets = AddTaskDiJets("jetsAOD_UA107");
823 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskQAsym.C");
824 AliAnalysisTaskQASym *taskQASym = AddTaskQAsym(-1);
825 if (!taskQASym) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQASym cannot run for this train conditions - EXCLUDED");
830 if(iPWG4TmpSourceSara){
831 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskEta.C");
832 AliAnalysisTaskEta *taskEta = AddTaskEta();
833 if (!taskEta) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskEta cannot run for this train conditions - EXCLUDED");
837 if(iPWG4JetServices){
838 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetServices.C");
839 AliAnalysisTaskJetServices *taskjetServ = 0;
840 taskjetServ = AddTaskJetServices();
841 if (!taskjetServ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetServices cannot run for this train conditions - EXCLUDED");
842 if(kGridRunRange[0]>0)taskjetServ->SetRunRange(kGridRunRange[0],kGridRunRange[1]);
843 else taskjetServ->SetRunRange(110000,160000);
844 taskjetServ->SetMCData(kIsMC);
845 taskjetServ->SetUsePhysicsSelection((Bool_t)iPhysicsSelection);
846 taskjetServ->SetPhysicsSelectionFlag(iPhysicsSelectionFlag); //
847 taskjetServ->SetNonStdFile(kDeltaAODJetName.Data());
848 taskjetServ->SetTrackEtaWindow(fTrackEtaWindow);
849 taskjetServ->SetFilterMask(kHighPtFilterMask);
851 if(kDeltaAODJetName.Length()>0&&kFilterAOD)taskjetServ->SetFilterAODCollisions(kTRUE);
852 // else if(iAODanalysis)taskjetServ->SetFilterAODCollisions(kTRUE);
853 // taskjetServ->SetDebugLevel(3);
854 taskjetServ->SetZVertexCut(8.);
858 taskjetServ->SetAODInput(kTRUE);
862 if(iPWG4JetSpectrum){
863 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetSpectrum2.C");
864 AliAnalysisTaskJetSpectrum2 *taskjetSpectrum = 0;
865 TString bkgClusters = kDefaultJetBackgroundBranch.Data();
866 bkgClusters.ReplaceAll(Form("%s_",AliAODJetEventBackground::StdBranchName()),"");
867 Printf("############# Possible jet branches ###################");
868 for(int iJF = 0;iJF < kJetListSpectrum.GetSize();iJF++){
869 TObjString *objStr = (TObjString*)kJetListSpectrum.At(iJF);
870 Printf("%3d: %s",iJF+1,objStr->GetString().Data());
873 if(iPWG4JetSpectrum&1){
875 for(int iJF = 0;iJF < kJetListSpectrum.GetSize();iJF++){
876 Long64_t value = kJetMapSpectrum(iJF+1);
877 Printf("iJF: %d value: %d", iJF+1,(Int_t)value);
878 if(value==0)continue;
879 TObjString *objStr = (TObjString*)kJetListSpectrum.At(iJF);
880 TString bName1 = objStr->GetString().Data();
883 TObjString *objStrBkg = (TObjString*)kJetListSpectrum.At(iJF);
884 TString bBkgName1("");
885 TString bBkgName2[3];
887 Long64_t valueBkg1 = kJetBackMapSpectrum(iJF+1);
889 TObjString *objStrBkg = (TObjString*)kJetListSpectrum.At(valueBkg1-1);
890 bBkgName1 = objStrBkg->GetString().Data();
895 for(int i = 0;i<3;i++){
896 iJF2 = value/kJetMapOffset[i]-1;
897 value = value%kJetMapOffset[i];
898 Printf("%d %d", iJF2+1,(Int_t)value);
899 if(iJF2>=0&&iJF2<kJetListSpectrum.GetSize()){
900 TObjString *objStr2 = (TObjString*)kJetListSpectrum.At(iJF2);
901 bName2[i] = objStr2->GetString().Data();
902 Long64_t valueBkg2 = kJetBackMapSpectrum(iJF2+1);
904 TObjString *objStrBkg2 = (TObjString*)kJetListSpectrum.At(valueBkg2-1);
905 bBkgName2[i] = objStrBkg2->GetString().Data();
912 // loop over all centralities
913 for(int ic = 0;ic<5;ic++){
915 Bool_t bDone = kFALSE;
916 for(int i = 0;i<3;i++){
917 Printf("%s/%s %s/%s",bName1.Data(),bBkgName1.Data(),bName2[i].Data(),bBkgName2[i].Data());
918 if(bName2[i].Length()){
919 taskjetSpectrum = AddTaskJetSpectrum2(bName1.Data(),bName2[i].Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,ic);
924 taskjetSpectrum = AddTaskJetSpectrum2(bName1.Data(),bName2[i].Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,ic);
931 // setting all the other things...
932 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
933 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
935 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetRecFull,0);
936 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetGenFull,0);
938 if(bName2[i].Length()==0){
939 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetGenFull,0);
940 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetGen,0);
943 taskjetSpectrum->SetAODJetInput(kTRUE);
944 taskjetSpectrum->SetAODTrackInput(kTRUE);
946 else if (iAODanalysis==2){
947 taskjetSpectrum->SetAODTrackInput(kTRUE);
948 taskjetSpectrum->SetAODJetInput(kFALSE);
950 // taskjetSpectrum->SetDebugLevel(11);
951 taskjetSpectrum->SetBranchBkgRec(bBkgName1.Data());
952 taskjetSpectrum->SetBranchBkgGen(bBkgName2[i].Data());
960 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),
961 "",kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
965 if(kDefaultJetBranchMC.Length()){
966 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),
967 kDefaultJetBranchMC.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
968 // taskjetSpectrum->SetMinJetPt(10);
969 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
970 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
971 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
972 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
973 if(iAODanalysis)SetAODInput(taskjetSpectrum);
975 if(kDefaultJetBranchMC2.Length()){
976 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),
977 kDefaultJetBranchMC2.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
978 // taskjetSpectrum->SetMinJetPt(10);
979 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
980 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
981 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
982 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
983 if(iAODanalysis)SetAODInput(taskjetSpectrum);
987 TString tmp2(kDefaultJetBranch.Data());
988 tmp2.ReplaceAll(Form(kJetSubtractMask2.Data(),0),Form(kJetSubtractMask2.Data(),2));
989 taskjetSpectrum = AddTaskJetSpectrum2(tmp2.Data(),kDefaultJetBranch.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
990 // taskjetSpectrum->SetDebugLevel(3);
991 // taskjetSpectrum->SetMinJetPt(10);
992 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
993 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
994 taskjetSpectrum->SetTrackEtaWindow(0.8);
995 taskjetSpectrum->SetJetEtaWindow(0.4);
997 // check the old subtracted vs. the new subtracted
998 TString tmp3(kDefaultJetBranch.Data());
999 tmp3.ReplaceAll(Form(kJetSubtractMask2.Data(),0),Form(kJetSubtractMask2.Data(),3));
1000 taskjetSpectrum = AddTaskJetSpectrum2(tmp3.Data(),kDefaultJetBranch.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
1001 // taskjetSpectrum->SetDebugLevel(3);
1002 // taskjetSpectrum->SetMinJetPt(10);
1003 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
1004 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
1005 taskjetSpectrum->SetTrackEtaWindow(0.8);
1006 taskjetSpectrum->SetJetEtaWindow(0.4);
1007 if(iAODanalysis)SetAODInput(taskjetSpectrum);
1010 if (!taskjetSpectrum) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetSpectrum2 cannot run for this train conditions - EXCLUDED");
1013 AliAnalysisManager::SetCommonFileName("PWG4_Fragmentation.root");
1014 if(iPWG4Fragmentation){
1015 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFragmentationFunction.C");
1016 AliAnalysisTaskFragmentationFunction *taskFrag = 0;
1023 for(int ic = 1;ic < 5;ic++){
1025 taskFrag = AddTaskFragmentationFunction(1<<23,kHighPtFilterMask, ic);
1026 if(kDeltaAODJetName.Length()>0)taskFrag->SetNonStdFile(kDeltaAODJetName.Data());
1027 if(iAODanalysis==2)taskFrag->UseAODInputJets(kFALSE);
1030 taskFrag = AddTaskFragmentationFunction(1<<0,kHighPtFilterMask, ic);
1031 if(kDeltaAODJetName.Length()>0)taskFrag->SetNonStdFile(kDeltaAODJetName.Data());
1032 if(iAODanalysis==2)taskFrag->UseAODInputJets(kFALSE);
1037 taskFrag = AddTaskFragmentationFunction(1<<28,kHighPtFilterMask, ic);
1038 taskFrag = AddTaskFragmentationFunction(1<<29,kHighPtFilterMask, ic);
1039 taskFrag = AddTaskFragmentationFunction(1<<30,kHighPtFilterMask, ic);
1045 if(!iAODanalysis==1){
1046 taskFrag = AddTaskFragmentationFunction(1<<26,kHighPtFilterMask, ic);
1047 if(kDeltaAODJetName.Length()>0)taskFrag->SetNonStdFile(kDeltaAODJetName.Data());
1048 if(iAODanalysis==2)taskFrag->UseAODInputJets(kFALSE);
1050 taskFrag = AddTaskFragmentationFunction(1<<27,kHighPtFilterMask, ic);
1051 if(kDeltaAODJetName.Length()>0)taskFrag->SetNonStdFile(kDeltaAODJetName.Data());
1052 if(iAODanalysis==2)taskFrag->UseAODInputJets(kFALSE);
1060 if (!taskFrag) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskFragmentationFunction cannot run for this train conditions - EXCLUDED");
1064 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetChem.C");
1065 AliAnalysisTask *taskChem = AddTaskJetChem(kHighPtFilterMask);
1066 if (!taskChem) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetChem cannot run for this train conditions - EXCLUDED");
1069 if (iPWG4JetResponse) {
1070 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetResponse.C");
1071 AliAnalysisTask *taskJetResponse = 0;
1074 taskJetResponse = AddTaskJetResponse("jets", "FASTJET", 0.4, kHighPtFilterMask, 0.15, 0);
1075 taskJetResponse = AddTaskJetResponse("jets", "FASTJET", 0.4, kHighPtFilterMask, 0.15, 1);
1077 taskJetResponse = AddTaskJetResponse("jets", "UA1", 0.4, kHighPtFilterMask, 1., 0);
1078 taskJetResponse = AddTaskJetResponse("jets", "UA1", 0.4, kHighPtFilterMask, 1., 2);
1081 taskJetResponse = AddTaskJetResponse("clusters", "ANTIKT", 0.4, kHighPtFilterMask, 0.15, 0);
1082 taskJetResponse = AddTaskJetResponse("clusters", "ANTIKT", 0.4, kHighPtFilterMask, 0.15, 1);
1084 if (!taskJetResponse) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetResponse cannot run for this train conditions - EXCLUDED");
1089 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJCORRANTask.C");
1090 AliJCORRANTask* corran = AddTaskJCORRAN(kDeltaAODJCORRANName.Data(),0);
1091 if(!corran)::Warning("AnalysisTrainPWG4Jets", "AliJCORRANTask cannot run for this train conditions - EXCLUDED");
1093 if(kDeltaAODJCORRANName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJCORRANName.Data());
1098 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskUE.C");
1099 AliAnalysisTaskUE *taskUE = 0;
1100 if(iPWG4UE&1)taskUE = AddTaskUE();
1102 taskUE =AddTaskUE("jetsAOD_CDF04","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
1103 // taskUE =AddTaskUE("jetsAOD_CDF07","CDF", "LJ", "TRANSV","MSP");
1104 taskUE =AddTaskUE("jetsAOD_SISCONE04","CDF", "LJ", "TRANSV","MSP");
1105 // taskUE =AddTaskUE("jetsAOD_SISCONE07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
1106 taskUE =AddTaskUE("jetsAOD_ICDF","CDF","LJ","TRANSV","MSP");
1107 taskUE =AddTaskUE("jetsAOD_FASTKT04","CDF", "LJ", "TRANSV","MSP");
1108 // taskUE =AddTaskUE("jetsAOD_FASTKT07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
1109 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta05", "TRANSV","MSP");
1110 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta09", "TRANSV","MSP");
1113 if (!taskUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskUE cannot run for this train conditions - EXCLUDED");
1117 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskLeadingTrackUE.C");
1118 AliAnalysisTaskLeadingTrackUE *taskLeadingUE = AddTaskLeadingTrackUE(kUseMC);
1119 if (!taskLeadingUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTasLeadingTrackkUE cannot run for this train conditions - EXCLUDED");
1120 // taskLeadingUE->SetFilterBit(64);
1124 if(iPWG4CorrectionsUE){
1125 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCorrectionsUE.C");
1126 AliAnalysisTaskCorrectionsUE *taskCorrectionsUE = 0;
1127 if(iPWG4CorrectionsUE&1)taskCorrectionsUE = AddTaskCorrectionsUE("jetsAOD_NONE","CDF","MP_eta05","TRANSV","MSP",kFALSE);
1128 if (!taskCorrectionsUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCorrectionsUE cannot run for this train conditions - EXCLUDED");
1132 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskThreeJets.C");
1133 AliAnalysisTaskThreeJets *taskThree = AddTaskThreeJets();
1134 if(!taskThree)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskThreets cannot run for this train conditions - EXCLUDED");
1137 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskQGSep.C");
1138 AliAnalysisTaskQGSep *taskQGSep = AddTaskQGSep(kUseMC,iAODanalysis);
1139 if(!taskQGSep)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQGSep cannot run for this train conditions - EXCLUDED");
1144 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskMinijet.C");
1145 AliAnalysisTaskMinijet *taskMini = AddTaskMinijet(-1,"esd",kUseMC,kGridDataSet);
1146 // if we ha highmult trigger add another task
1147 if(!taskMini)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskMinjet cannot run for this train conditions - EXCLUDED");
1150 AliAnalysisManager::SetCommonFileName("PWG4_HighPtQA.root");
1152 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQAMC.C");
1153 AliPWG4HighPtQAMC *taskQAMC = 0;
1156 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),0);
1157 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),1);
1158 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),2);
1159 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),3);
1162 if (!taskQAMC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQAMC cannot run for this train conditions - EXCLUDED");
1166 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtTrackQA.C");
1168 AddTaskPWG4HighPtTrackQAAll(kGridDataSet.Data(),kIsPbPb,iAODanalysis);
1173 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQATPConly.C");
1174 AliPWG4HighPtQATPConly *taskQATPC = 0;
1175 if(iPWG4PtQATPC&1)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),1);
1176 if(iPWG4PtQATPC&2)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),2);
1178 if (!taskQATPC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQATPC cannot run for this train conditions - EXCLUDED");
1182 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4CosmicCandidates.C");
1184 AliPWG4CosmicCandidates *taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(0);
1185 taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(1);
1187 if (!taskPWG4CosmicCandidates) ::Warning("AnalysisTrainPWG4Jets", "AddTaskPWG4CosmicCandidates cannot run for this train conditions - EXCLUDED");
1192 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtSpectra.C");
1193 AddTaskPWG4HighPtSpectraAll(kGridDataSet.Data(),kIsPbPb);
1197 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskKMeans.C");
1198 AliAnalysisTaskKMeans *taskKMeans = AddTaskKMeans();
1199 if (!taskKMeans) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskKMenans cannot run for this train conditions - EXCLUDED");
1203 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPartCorr.C");
1204 AliAnalysisTaskParticleCorrelation *taskpartcorrPHOS = AddTaskPartCorr("AOD", "PHOS",kFALSE,kIsMC);
1205 if (!taskpartcorrPHOS) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation PHOS cannot run for this train conditions - EXCLUDED");
1206 AliAnalysisTaskParticleCorrelation *taskpartcorrEMCAL = AddTaskPartCorr("AOD", "EMCAL",kFALSE,kIsMC);
1207 if (!taskpartcorrEMCAL) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation EMCAL cannot run for this train conditions - EXCLUDED");
1208 if(kDeltaAODPartCorrName.Length()>0)mgr->RegisterExtraFile(kDeltaAODPartCorrName.Data());
1212 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/QA/AddTaskCalorimeterQA.C");
1213 AliAnalysisTaskParticleCorrelation *taskcaloQA = AddTaskCalorimeterQA("ESD",kFALSE,kIsMC,kCaloQAOutputFileName.Data());
1214 if(!taskcaloQA)::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation QA cannot run - EXCLUDED");
1215 // if(kCaloQAOutputFileName.Length()>0)mgr->RegisterExtraFile(kCaloQAOutputFileName.Data());
1219 // using namespace JetCorrelHD;
1220 TString cdir = gSystem->WorkingDirectory();
1221 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
1222 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCorrel.C");
1223 AliAnalysisTaskJetCorrel *taskjetcorr = AddTaskJetCorrel();
1224 gSystem->ChangeDirectory(cdir);
1225 if (!taskjetcorr) ::Warning("AnalysisTrainNew", "AliAnalysisTaskJetCorrel cannot run for this train conditions - EXCLUDED");
1229 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskTaggedPhotons.C");
1230 AliAnalysisTaskTaggedPhotons * taskTagged = AddTaskTaggedPhotons(kFALSE); // EMCAL
1231 taskTagged = AddTaskTaggedPhotons(kTRUE); // PHOS
1232 if (!taskTagged) ::Warning("AnalysisTrainNew", "AliAnalysisTaskTaggedPhotons cannot run for this train conditions - EXCLUDED");
1234 if (iPWG4omega3pi) {
1235 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskomega3pi.C");
1236 AliAnalysisTaskOmegaPi0PiPi *taskomega3pi = AddTaskomega3pi();
1237 if (!taskomega3pi) ::Warning("AnalysisTrainNew", "AliAnalysisTaskomega3pi cannot run\
1238 for these train conditions - EXCLUDED");
1241 // PWG4 gamma conversion analysis
1242 if (iPWG4GammaConv) {
1243 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskGammaConversion.C");
1244 TString cdir = gSystem->WorkingDirectory();
1245 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
1246 // TString gcArguments = "-run-on-train -run-jet -run-chic -run-neutralmeson -run-cf";
1247 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
1248 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
1249 TString gcArguments = "-run-on-train -run-jet -run-omega-meson -use-own-xyz -run-neutralmeson -no-aod";
1250 // TString kGCAnalysisCutSelectionId="9003562000100310";
1251 // TString kGCAnalysisCutSelectionId="9003562000100312";
1252 // gcArguments.Append(Form(" -set-cut-selection %s ",kGCAnalysisCutSelectionId.Data()));
1253 if(!kIsMC)gcArguments += " -mc-off";
1254 AliAnalysisTaskGammaConversion * taskGammaConversion = AddTaskGammaConversion(gcArguments,mgr->GetCommonInputContainer());
1255 gSystem->ChangeDirectory(cdir);
1256 taskGammaConversion->SelectCollisionCandidates();
1257 if (!taskGammaConversion) ::Warning("AnalysisTrainNew", "AliAnalysisTaskGammaConversion cannot run for these train conditions - EXCLUDED");
1260 if (iPWG4CaloConv) {
1261 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCaloConv.C");
1262 AliAnalysisTaskCaloConv * taskCaloConv = AddTaskCaloConv();
1263 if (!taskCaloConv) ::Warning("AnalysisTrainNew", "AliAnalysisTaskCaloConv cannot run for these train conditions - EXCLUDED");
1268 //==========================================================================
1269 // FOR THE REST OF THE TASKS THE MACRO AddTaskXXX() is not yet implemented/
1273 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1274 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1277 if (mgr->InitAnalysis()) {
1279 // if (kSaveTrain || strlen(config_file)) gSystem->ChangeDirectory(kTrainName);
1280 if (!strcmp(plugin_mode,"submit")&&smode=="GRID"){
1281 TString alien_workdir = gGrid->GetHomeDirectory();
1282 if (iAODanalysis) alien_workdir += "analysisAOD";
1283 else alien_workdir += "analysisESD";
1284 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s%s",kGridDataSet.Data(),kGridExtraAliendirLevel.Data());
1285 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1286 printf("=== AnalysisTrainPWG4Jets:: Registering jdl in the work directory alien://%s/%s, should be done by the manager! ===\n",
1287 alien_workdir.Data(),gridhandler->GetGridOutputDir());
1290 dest = Form("%s/%s/%s.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1291 if(AliAnalysisAlien::FileExists(dest.Data())){
1292 Printf("%s exist on grid removing...",dest.Data());
1293 gGrid->Rm(dest.Data());
1295 Printf("%s copy ...",dest.Data());
1296 TFile::Cp(Form("file:%s.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
1300 dest = Form("%s/%s/%s_merge.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1301 if(AliAnalysisAlien::FileExists(dest.Data())){
1302 Printf("%s exist on grid removing...",dest.Data());
1303 gGrid->Rm(dest.Data());
1305 Printf("%s copy ...",dest.Data());
1306 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
1308 dest = Form("%s/%s/%s_merge_final.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1309 if(AliAnalysisAlien::FileExists(dest.Data())){
1310 Printf("%s exist on grid removing...",dest.Data());
1311 gGrid->Rm(dest.Data());
1313 Printf("%s copy ...",dest.Data());
1314 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
1316 AliLog::SetGlobalLogLevel(AliLog::kError);
1317 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
1318 TFile * fM = TFile::Open("manager_local.root","RECREATE");
1323 // grmpf, aliroot error handler overwrites root
1324 gErrorIgnoreLevel = kErrorIgnoreLevel;
1325 if(gErrorIgnoreLevel>3000) AliLog::SetGlobalLogLevel(AliLog::kFatal);
1326 StartAnalysis(smode, chain);
1327 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
1328 for(int i = 0;i < mgr->GetTopTasks()->GetEntries();i++){
1329 mgr->ProfileTask(i);
1332 if (!strcmp(plugin_mode, "offline")&&smode=="GRID"){
1333 // Offline mode path files
1335 // PatchAnalysisMacro();
1338 if (kSaveTrain && smode=="GRID") {
1339 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1340 TString alien_workdir = gGrid->GetHomeDirectory();
1341 if (iAODanalysis) alien_workdir += "analysisAOD";
1342 else alien_workdir += "analysisESD";
1343 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s%s",kGridDataSet.Data(),kGridExtraAliendirLevel.Data());
1344 // kGridOutdir = gridhandler->GetGridOutputDir();
1345 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
1346 alien_workdir.Data());
1347 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data())))
1348 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
1349 if (strcmp(plugin_mode, "test"))
1350 TFile::Cp(Form("file:%sConfig.C",kTrainName.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
1355 //______________________________________________________________________________
1356 void StartAnalysis(const char *mode, TChain *chain) {
1359 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1360 if (!strcmp(mode, "LOCAL")) imode = 0;
1361 if (!strcmp(mode, "PROOF")) imode = 1;
1362 if (!strcmp(mode, "GRID")) imode = 2;
1366 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1369 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
1372 if (!kProofDataSet.Length()) {
1373 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "kProofDataSet is empty");
1376 mgr->StartAnalysis(mode, kProofDataSet, kProofEvents,kProofOffset);
1380 if (!mgr->GetGridHandler()) {
1381 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Grid plugin not initialized");
1384 mgr->StartAnalysis("grid",chain,kNumberOfEvents);
1387 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1390 // mgr->StartAnalysis(mode, chain);
1391 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
1397 //______________________________________________________________________________
1398 void CheckModuleFlags(const char *mode) {
1399 // Checks selected modules and insure compatibility
1401 if (!strcmp(mode, "LOCAL")) imode = 0;
1402 if (!strcmp(mode, "PROOF")) imode = 1;
1403 if (!strcmp(mode, "GRID")) imode = 2;
1407 kPluginAliRootVersion = ""; // NO aliroot if we use CPAR
1412 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
1417 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
1418 kPluginUse = kFALSE;
1423 // switch off anthin related to MC
1429 // Decide if we have PbPb
1430 if(kGridDataSet.CompareTo("LHC10h")==0||kGridDataSet.Contains("LHC10h")) {
1431 Printf("Using settings for Pb+Pb");
1440 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
1442 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
1445 kUseAODTags = kFALSE;
1447 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
1449 if (iPhysicsSelection)
1450 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "Physics Selection disabled in analysis on AOD's");
1451 iPhysicsSelection = 0;
1454 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
1458 // Disable tasks that do not work yet on AOD data
1459 if(iPWG4JCORRAN)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 JCORRAN disabled in analysis on AOD's");
1461 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
1463 if( iPWG4PtQATPC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtTPC disabled in analysis on AOD's");
1465 if( iPWG4Cosmics)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Comics disabled in analysis on AOD's");
1468 if( iPWG4PtSpectra)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
1470 if(iPWG4KMeans)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4KMeans disabled on AOD's");
1472 if (iPWG4JetCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4Jetcorr disabled on AOD's");
1474 if (iPWG4PartCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
1476 if (iPWG4CaloQA)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4CaloQA disabled on AOD's");
1478 if (iPWG4Tagged)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4tagged disabled on AOD's");
1481 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
1483 if(iPWG1QASym)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG1 QA Sym disabled in analysis on AOD's");
1484 if (iPWG4GammaConv)::Info("AnalysisPWG4Jets.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's");
1487 iCentralitySelection = 0;
1492 iCentralitySelection = 1;
1498 if(kUseKinefilter)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Kine Filter disabled in analysis without MC");
1499 kUseKinefilter = kFALSE;
1500 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis without MC");
1502 if( iPWG4CorrectionsUE)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 CorrectionsUE disabled in analysis without MC");
1503 iPWG4CorrectionsUE = 0;
1509 kUseKinefilter = kFALSE;
1510 kUseMuonfilter = kFALSE;
1513 iPWG4JetSpectrum = iPWG4UE = iPWG4CorrectionsUE = iPWG4ThreeJets = iPWG4QGSep = iDIJETAN = 0;
1516 iPWG4JetTasks = iPWG4JetServices||iPWG4JetSpectrum||iPWG4UE||iPWG4LeadingUE||iPWG4PtQAMC||iPWG4PtTrackQA||iPWG4PtSpectra||iPWG4PtQATPC||iPWG4Cosmics||iPWG4ThreeJets||iPWG4QGSep||iPWG4JetChem||iPWG4Minijet||iPWG4Fragmentation;
1517 iPWG4PartCorrLibs = iPWG4PartCorr||iPWG4Tagged||iPWG4CaloQA;
1518 iPWG4GammaConvLib = iPWG4GammaConv||iPWG4CaloConv;
1521 iEMCUtilLibs = iPWG4JetTasks||iPWG4PartCorrLibs||iPWG4JCORRAN||iPWG4GammaConvLib||iJETAN;
1522 iJETANLib = iPWG4JetTasks||iJETAN||iDIJETAN;
1524 if (iESDfilter) {iAODhandler=1;}
1525 if (kUseKinefilter && !kUseMC) kUseKinefilter = kFALSE;
1526 if (kUseAODTags && !iAODhandler) kUseAODTags = kFALSE;
1532 //______________________________________________________________________________
1533 Bool_t Connect(const char *mode) {
1534 // Connect <username> to the back-end system.
1536 if (!strcmp(mode, "LOCAL")) imode = 0;
1537 if (!strcmp(mode, "PROOF")) imode = 1;
1538 if (!strcmp(mode, "GRID")) imode = 2;
1539 TString username = gSystem->Getenv("alien_API_USER");
1544 if (!username.Length()) {
1545 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1546 1. Have called: alien-token-init <username>\n \
1547 2. Have called: >source /tmp/gclient_env_$UID");
1550 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
1551 username.Data(), kProofCluster.Data());
1552 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
1553 // TProof::Open(Form("%s@%s:31093", username.Data(), kProofCluster.Data()));
1554 TProof::Open(Form("%s@%s", username.Data(), kProofCluster.Data()));
1556 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
1557 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
1560 if(kProofClearPackages)gProof->ClearPackages();
1562 if(kProofSaveToAlien){
1563 TGrid::Connect("alien://");
1565 TString homedir = gGrid->GetHomeDirectory();
1566 TString workdir = homedir + kTrainName;
1567 if (!gGrid->Cd(workdir)) {
1569 if (gGrid->Mkdir(workdir)) {
1570 gGrid->Cd(kTrainName);
1571 ::Info("AnalysisTrainPWG4Jets::Connect()", "Directory %s created", gGrid->Pwd());
1574 gGrid->Mkdir("proof_output");
1575 gGrid->Cd("proof_output");
1576 kProofOutdir = Form("alien://%s", gGrid->Pwd());
1581 if (!username.Length()) {
1582 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1583 1. Have called: alien-token-init <username>\n \
1584 2. Have called: >source /tmp/gclient_env_$UID");
1587 if (kPluginUse && !gSystem->Getenv("alien_CLOSE_SE")) {
1588 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode),
1589 "When using the AliEn plugin it is preferable to define the \
1590 variable alien_CLOSE_SE in your environment.");
1593 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to AliEn ...",
1595 TGrid::Connect("alien://");
1596 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
1599 ::Error("AnalysisTrainPWG4Jets.C::Connect", "Unknown run mode: %s", mode);
1602 ::Info("AnalysisTrainPWG4Jets.C::Connect","Connected in %s mode", mode);
1606 //______________________________________________________________________________
1607 Bool_t LoadCommonLibraries(const char *mode)
1609 if (!gSystem->Getenv("ALICE_ROOT")) {
1610 ::Error("AnalysisTrainPWG4Jets.C", "Analysis train requires that ALICE_ROOT is set to pick up Configurations");
1614 // Load common analysis libraries.
1616 if (!strcmp(mode, "LOCAL")) imode = 0;
1617 if (!strcmp(mode, "PROOF")) imode = 1;
1618 if (!strcmp(mode, "GRID")) imode = 2;
1619 Bool_t success = kTRUE;
1621 gSystem->Load("libTree.so");
1622 gSystem->Load("libGeom.so");
1623 gSystem->Load("libVMC.so");
1624 gSystem->Load("libPhysics.so");
1626 // Load framework classes. Par option ignored here.
1631 success &= LoadLibrary("STEERBase", mode, kTRUE);
1632 success &= LoadLibrary("ESD", mode, kTRUE);
1633 success &= LoadLibrary("AOD", mode, kTRUE);
1634 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
1635 success &= LoadLibrary("OADB", mode, kTRUE);
1636 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
1637 success &= LoadLibrary("ROOTFILES", mode, kTRUE);
1638 // success &= LoadLibrary("EventMixing", mode,kTRUE);
1639 success &= LoadLibrary("CORRFW", mode, kTRUE);
1641 success &= LoadLibrary("libSTEERBase.so", mode);
1642 success &= LoadLibrary("libESD.so", mode);
1643 success &= LoadLibrary("libAOD.so", mode);
1644 success &= LoadLibrary("libANALYSIS.so", mode);
1645 success &= LoadLibrary("libOADB.so", mode, kTRUE);
1646 success &= LoadLibrary("libANALYSISalice.so", mode);
1647 // success &= LoadLibrary("libEventMixing.so", mode);
1648 success &= LoadLibrary("libCORRFW.so", mode);
1649 gROOT->ProcessLine(".include $ALICE_ROOT/include");
1654 if (kProofUseAFPAR && !gSystem->AccessPathName(kProofAFversion)) ires = gProof->UploadPackage(kProofAFversion);
1656 success &= LoadLibrary("STEERBase", mode);
1657 success &= LoadLibrary("ESD", mode);
1658 success &= LoadLibrary("AOD", mode);
1659 success &= LoadLibrary("ANALYSIS", mode);
1660 success &= LoadLibrary("ANALYSISalice", mode);
1661 success &= LoadLibrary("EventMixing", mode);
1662 success &= LoadLibrary("CORRFW", mode);
1664 ires = gProof->EnablePackage(kProofAFversion);
1665 if (ires<0) success = kFALSE;
1666 success &= LoadLibrary("CORRFW", mode);
1670 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
1674 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
1675 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
1676 gSystem->GetIncludePath());
1678 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: FAILED");
1684 //______________________________________________________________________________
1685 Bool_t LoadAnalysisLibraries(const char *mode)
1687 // Load common analysis libraries.
1688 Bool_t success = kTRUE;
1690 if (!LoadLibrary("TENDER", mode, kTRUE) ||
1691 !LoadLibrary("TENDERSupplies", mode, kTRUE)) return kFALSE;
1695 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
1696 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
1701 // this part needs some rework in case we do not need the fastjed finders for processing
1703 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
1704 !LoadLibrary("PHOSUtils", mode, kTRUE)) return kFALSE;
1706 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
1707 if (!strcmp(mode, "PROOF")){
1708 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libCGAL.so\"\)", kTRUE);
1709 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libfastjet.so\"\)", kTRUE);
1710 // problem when loading siscone copiled with different gcc version??
1711 // gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libsiscone.so\"\)", kTRUE);
1712 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libSISConePlugin.so\"\)", kTRUE);
1715 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
1716 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
1717 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
1718 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
1721 // par files plus FASTJET needs some extra work... need to change
1722 // the loading sequence in the auto generated .C file
1723 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
1724 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
1725 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
1726 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
1728 if (!LoadLibrary("FASTJETAN", mode, kTRUE)) return kFALSE;
1731 if (!LoadLibrary("PWG4JetTasks", mode, kTRUE)) return kFALSE;
1735 if (!LoadSource(Form("%s/PWG1/AliAnalysisTaskQASym.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1737 if(iPWG4TmpSourceSara){
1738 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
1739 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskEta.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1742 if (iPWG4PartCorrLibs) {
1743 if (!LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
1744 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
1747 // PWG4 particle correlations
1748 if(!LoadLibrary("PWG4JCORRAN",mode,kTRUE))return kFALSE;
1751 if (!LoadLibrary("PWG4JetCorrel", mode, kTRUE)) return kFALSE;
1753 if (iPWG4omega3pi) {
1754 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
1756 if (iPWG4GammaConvLib) {
1757 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
1760 ::Info("AnalysisTrainPWG4Jets.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
1764 //______________________________________________________________________________
1765 Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
1767 // Load a module library in a given mode. Reports success.
1770 TString smodule(module);
1771 if (!strcmp(mode, "LOCAL")) imode = 0;
1772 if (!strcmp(mode, "PROOF")) imode = 1;
1773 if (!strcmp(mode, "GRID")) imode = 2;
1774 TString mod(module);
1775 if (!mod.Length()) {
1776 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Empty module name");
1779 // If a library is specified, just load it
1780 if (smodule.EndsWith(".so")) {
1781 mod.Remove(mod.Index(".so"));
1782 result = gSystem->Load(mod);
1784 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load library %s", module);
1787 if (rec) anaLibs += Form("%s.so ",mod.Data());
1788 if (rec) anaLibsExtra += Form("%s.so ",mod.Data());
1791 // Check if the library is already loaded
1792 if (strlen(gSystem->GetLibraries(Form("%s.so", module), "", kFALSE)) > 0)
1798 result = SetupPar(module);
1799 if (rec) anaPars += Form("%s.par ", module);
1801 result = gSystem->Load(Form("lib%s.so", module));
1802 if (rec) anaLibs += Form("lib%s.so ", module);
1806 if(!gSystem->AccessPathName(module)){
1807 ::Info("AnalysisTrainPWG4Jets.C::LoadLibrary", "Removing directory %s",module);
1808 gSystem->Exec(Form("rm -rf %s",module));
1810 result = gProof->UploadPackage(module);
1812 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
1814 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
1818 result = gProof->EnablePackage(module);
1824 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load module %s", module);
1832 //______________________________________________________________________________
1833 Bool_t LoadSource(const char *source, const char *mode, Bool_t rec=kFALSE)
1835 // Load a module library in a given mode. Reports success.
1838 if (!strcmp(mode, "LOCAL")) imode = 0;
1839 if (!strcmp(mode, "PROOF")) imode = 1;
1840 if (!strcmp(mode, "GRID")) imode = 2;
1841 TString ssource(source);
1842 TString basename = gSystem->BaseName(ssource.Data());
1843 if (!ssource.Length()) {
1844 ::Error("AnalysisTrainPWG4Jets.C::LoadSource", "Empty task name");
1847 // we have a source code so compile it
1848 if (ssource.EndsWith(".cxx")) {
1849 // need to copy it here other wise the path is also used on grid...
1850 ssource.Remove(ssource.Index(".cxx"));
1851 basename.Remove(basename.Index(".cxx"));
1852 Printf("LoadSources:: Copying... path %s{cxx,h}",ssource.Data());
1853 gSystem->Exec(Form("cp %s.cxx . ",ssource.Data()));
1854 gSystem->Exec(Form("cp %s.h . ",ssource.Data()));
1856 // only needed for local compilation, in grid and proof mode
1857 // the task headers are uploaded
1858 // path.Remove(path.Index(gSystem->BaseName(path.Data())));
1859 // Printf("LoadSources:: Including path %s",path.Data());
1860 // if(path.Length()>0)gROOT->ProcessLine(Form(".include %s",path.Data()));
1861 Printf("LoadSources:: Loading... path %s",basename.Data());
1864 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
1867 result = gProof->LoadMacro(Form("%s.cxx++g",basename.Data()));
1870 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
1872 // what we want to compile
1873 anaSources += Form("%s.cxx ",basename.Data());
1874 // what we need as input...
1875 anaLibs += Form("%s.cxx %s.h ",basename.Data(),basename.Data());
1883 ::Error("AnalysisTrainPWG4Jets.C::LoadSources", "Could not load source %s", source);
1890 //______________________________________________________________________________
1891 TChain *CreateChain(const char *mode, const char *plugin_mode)
1893 // Create the input chain
1895 if (!strcmp(mode, "LOCAL")) imode = 0;
1896 if (!strcmp(mode, "PROOF")) imode = 1;
1897 if (!strcmp(mode, "GRID")) imode = 2;
1898 TChain *chain = NULL;
1903 if (!kLocalXMLDataset.Length()) {
1905 chain = new TChain("aodTree");
1908 in.open(kLocalDataList.Data());
1912 if (line.Length() == 0) continue;
1913 Printf("%d adding %s",ic,line.Data());
1914 chain->Add(line.Data());
1919 chain = CreateChainSingle(kLocalXMLDataset, "aodTree");
1922 if (!kLocalXMLDataset.Length()) {
1924 chain = new TChain("esdTree");
1927 in.open(kLocalDataList.Data());
1930 if (line.Length() == 0) continue;
1931 cout << " line = " << line << endl;
1932 chain->Add(line.Data());
1936 chain = CreateChainSingle(kLocalXMLDataset, "esdTree");
1944 // AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1945 // AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1947 TString treeName = "esdTree";
1948 if (iAODanalysis) treeName = "aodTree";
1949 chain = CreateChainSingle("wn.xml", treeName);
1954 if (chain && chain->GetNtrees()) return chain;
1958 //______________________________________________________________________________
1959 TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
1961 printf("*******************************\n");
1962 printf("*** Getting the ESD Chain ***\n");
1963 printf("*******************************\n");
1964 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
1966 if (!myCollection) {
1967 ::Error("AnalysisTrainPWG4Jets.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
1971 TChain* chain = new TChain(treeName);
1972 myCollection->Reset() ;
1973 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
1978 //______________________________________________________________________________
1979 Int_t SetupPar(char* pararchivename)
1981 if (!pararchivename || !strlen(pararchivename)) return -1;
1982 char processline[1024];
1983 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
1984 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
1985 ::Info("AnalysisTrainPWG4Jets.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
1986 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
1987 Form("%s.par",pararchivename));
1989 ::Error("AnalysisTrainPWG4Jets.C::SetupPar", "Cannot find %s.par", pararchivename);
1993 if (kPluginUse && kSaveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, kTrainName.Data()));
1994 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
1996 TString ocwd = gSystem->WorkingDirectory();
1997 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
1999 // check for BUILD.sh and execute
2000 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
2001 printf("*******************************\n");
2002 printf("*** Building PAR archive ***\n");
2003 printf("*******************************\n");
2004 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
2005 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
2010 // check for SETUP.C and execute
2011 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
2012 printf("*******************************\n");
2013 printf("*** Setup PAR archive ***\n");
2014 printf("*******************************\n");
2015 gROOT->Macro("PROOF-INF/SETUP.C");
2017 if (!gSystem->ChangeDirectory(ocwd.Data())){
2018 Error("Change back directory",Form("Cannot change to %s",ocwd.Data()));
2024 //______________________________________________________________________________
2025 AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
2027 // Check if user has a valid token, otherwise make one. This has limitations.
2028 // One can always follow the standard procedure of calling alien-token-init then
2029 // source /tmp/gclient_env_$UID in the current shell.
2030 // if (!AliAnalysisGrid::CreateToken()) return NULL;
2031 AliAnalysisAlien *plugin = new AliAnalysisAlien();
2032 // Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
2033 plugin->SetRunMode(plugin_mode);
2034 if (kPluginUseProductionMode) plugin->SetProductionMode();
2035 plugin->SetJobTag(kJobTag);
2036 plugin->SetNtestFiles(1);
2037 // plugin->SetPreferedSE("ALICE::NIHAM::File");
2038 // Set versions of used packages
2039 plugin->SetAPIVersion("V1.1x");
2040 // plugin->SetAPIVersion("V1.0x");
2041 // plugin->SetAPIVersion("V2.4");
2042 plugin->SetROOTVersion(kPluginRootVersion);
2043 plugin->SetAliROOTVersion(kPluginAliRootVersion);
2044 // Declare input data to be processed.
2045 // Method 1: Create automatically XML collections using alien 'find' command.
2046 // Define production directory LFN
2047 plugin->SetGridDataDir(kGridDatadir.Data());
2048 // Set data search pattern
2049 if (iAODanalysis) plugin->SetDataPattern(Form(" %s/*/*AliAOD.root",kGridPassPattern.Data()));
2050 else plugin->SetDataPattern(Form(" %s/*/*AliESDs.root",kGridPassPattern.Data()));
2051 // ...then add run numbers to be considered
2052 // plugin->SetRunRange(kGridRunRange[0], kGridRunRange[1]);
2053 for (Int_t i=kGridRunRange[0]; i<=kGridRunRange[1]; i++) {
2054 Printf("AnalysisTrainPWG4Jets Adding run number %s", Form(kGridRunPattern.Data(),i));
2055 plugin->AddRunNumber(Form(kGridRunPattern.Data(),i));
2058 if(kGridLocalRunList.Length()>0){
2060 in1.open(kGridLocalRunList.Data());
2064 // just use run numbers, negatives will be excluded
2067 if(iRun>=0&&nRun>=kGridOffsetRunFromList&&(nRun<kGridMaxRunsFromList)){
2068 Printf("AnalysisTrainPWG4Jets Adding run number from File %d: %s",nRun,Form(kGridRunPattern.Data(),iRun));
2069 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
2073 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d: %d",nRun, iRun);
2078 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d: %d",nRun, iRun);
2082 // Method 2: Declare existing data files (raw collections, xml collections, root file)
2083 // If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
2084 // XML collections added via this method can be combined with the first method if
2085 // the content is compatible (using or not tags)
2086 // plugin->AddDataFile("tag.xml");
2087 // plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
2088 // Define alien work directory where all files will be copied. Relative to alien $HOME.
2089 TString alien_workdir = "";
2091 if (iAODanalysis) alien_workdir += "analysisAOD";
2092 else alien_workdir += "analysisESD";
2093 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s%s",kGridDataSet.Data(),kGridExtraAliendirLevel.Data());
2094 plugin->SetGridWorkingDir(alien_workdir.Data());
2096 // Declare alien output directory. Relative to working directory.
2097 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
2098 plugin->SetGridOutputDir(kGridOutdir);
2100 // Add external packages
2101 plugin->AddExternalPackage("boost::v1_43_0");
2102 plugin->AddExternalPackage("cgal::v3.6");
2103 plugin->AddExternalPackage("fastjet::v2.4.2");
2106 // set extra libs before par file compilation
2107 anaLibs += kGridExtraFiles;
2108 anaLibs = anaLibs.Strip();
2109 Printf("anaLibs %s",anaLibs.Data());
2110 Printf("anaLibsExtra %s",anaLibsExtra.Data());
2112 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs.Data());
2113 if (anaLibsExtra.Length()) plugin->SetAdditionalRootLibs(anaLibsExtra.Data());
2115 TString ana_sources = "";
2116 TString ana_add = "";
2117 if (kUsePAR && anaPars.Length()) {
2118 printf("%s\n", anaPars.Data());
2121 arr = anaPars.Tokenize(" ");
2123 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
2127 // Declare the analysis source files names separated by blancs. To be compiled runtime
2128 // using ACLiC on the worker nodes.
2129 ana_sources = anaSources.Strip();
2130 // Declare all libraries (other than the default ones for the framework. These will be
2131 // loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
2133 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
2134 plugin->SetExecutableCommand(kPluginExecutableCommand.Data());
2135 // Declare the output file names separated by blancs.
2136 // (can be like: file.root or file.root@ALICE::Niham::File)
2137 plugin->SetMergeExcludes(kGridMergeExclude);
2138 plugin->SetMaxMergeFiles(kGridMaxMergeFiles);
2139 plugin->SetNrunsPerMaster(kGridRunsPerMaster);
2140 plugin->SetMergeViaJDL(kPluginMergeViaJDL);
2141 // Use fastread option
2142 plugin->SetFastReadOption(kPluginFastReadOption);
2143 // UseOverwrite mode
2144 plugin->SetOverwriteMode(kPluginOverwriteMode);
2145 // Optionally define the files to be archived.
2146 // plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
2147 plugin->SetOutputToRunNo(kPluginOutputToRunNumber); // write the output to subdirs named after run number
2149 // Put default output files to archive
2150 TString listhists = "";
2151 TString listaods = "";
2152 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
2153 TIter next(mgr->GetOutputs());
2154 AliAnalysisDataContainer *output;
2155 while ((output=(AliAnalysisDataContainer*)next())) {
2156 const char *filename = output->GetFileName();
2157 if (!(strcmp(filename, "default"))) {
2158 if (!mgr->GetOutputEventHandler()) continue;
2159 filename = mgr->GetOutputEventHandler()->GetOutputFileName();
2160 if (listaods.Length()) listaods += " ";
2161 listaods += filename;
2163 if(!listhists.Contains(filename)){
2164 if (listhists.Length()) listhists += " ";
2165 listhists += filename;
2170 if (mgr->GetExtraFiles().Length()) {
2171 if (listaods.Length()) listaods += " ";
2172 listaods += mgr->GetExtraFiles();
2175 // if we do not fill the aod we do not need to store it
2176 // kGridMergeExclude = listaods;
2179 TString outputFiles = "";
2180 outputFiles += mgr->GetExtraFiles();
2181 if (listhists.Length()) outputFiles += " ";
2182 outputFiles += listhists;
2183 plugin->SetDefaultOutputs(kFALSE);
2184 Printf("%s:%d Starting with the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
2186 // no harm done when we try to remove something that is not there :)
2187 if(!(kSaveAOD&(1<<0))){
2188 outputFiles.ReplaceAll("AliAOD.root ","");
2189 listaods.ReplaceAll("AliAOD.root ","");
2191 if(!(kSaveAOD&(1<<1))){
2192 if(kDeltaAODJetName.Length())outputFiles.ReplaceAll(kDeltaAODJetName.Data(),"");
2193 if(kDeltaAODJetName.Length())listaods.ReplaceAll(kDeltaAODJetName.Data(),"");
2196 if(!(kSaveAOD&(1<<2))){
2197 if(kDeltaAODPartCorrName.Length())outputFiles.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
2198 if(kDeltaAODPartCorrName.Length())listaods.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
2200 if(!(kSaveAOD&(1<<3))){
2201 if(kDeltaAODJCORRANName.Length())outputFiles.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
2202 if(kDeltaAODJCORRANName.Length())listaods.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
2206 plugin->SetDefaultOutputs(kFALSE);
2207 Printf("%s:%d Saving the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
2208 plugin->SetOutputFiles(outputFiles.Data());
2211 TString outputArchive;
2212 outputArchive = Form("log_archive.zip:std*@%s","disk=1");
2213 listaods.ReplaceAll(" ", ",");
2214 listhists.ReplaceAll(" ", ",");
2215 if (listhists.Length()){
2216 outputArchive += " ";
2217 outputArchive += "root_archive.zip:";
2218 outputArchive += listhists;
2219 if (listaods.Length()){
2220 outputArchive += ",";
2221 outputArchive += listaods;
2223 outputArchive += Form("@%s", kGridOutputStorages.Data());
2227 if (listaods.Length()){
2228 // we have only aod'ish output
2229 outputArchive += " ";
2230 outputArchive += "root_archive.zip:";
2231 outputArchive += listaods;
2232 outputArchive += Form("@%s", kGridOutputStorages.Data());
2235 // no other outputs than std..
2236 ::Fatal("AnalysisTrainPWG4Jets", "No task output !");
2240 plugin->SetDefaultOutputs(kFALSE);
2241 plugin->SetOutputArchive(outputArchive);
2244 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
2245 plugin->SetAnalysisMacro(Form("%s.C", kTrainName.Data()));
2246 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
2247 plugin->SetSplitMaxInputFileNumber(kGridFilesPerJob);
2248 // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
2249 // plugin->SetMaxInitFailed(5);
2250 // Optionally resubmit threshold.
2251 // plugin->SetMasterResubmitThreshold(90);
2252 // Optionally set time to live (default 30000 sec)
2253 plugin->SetTTL(54000); // 15h...
2254 // Optionally set input format (default xml-single)
2255 plugin->SetInputFormat("xml-single");
2256 // Optionally modify the name of the generated JDL (default analysis.jdl)
2257 plugin->SetJDLName(Form("%s.jdl", kTrainName.Data()));
2258 // Optionally modify the executable name (default analysis.sh)
2259 plugin->SetExecutable(Form("%s.sh", kTrainName.Data()));
2260 // Optionally modify job price (default 1)
2261 plugin->SetPrice(1);
2262 // Optionally modify split mode (default 'se')
2263 plugin->SetSplitMode("se");
2267 //______________________________________________________________________________
2270 // Write train configuration in a file. The file name has the format:
2271 // train_[trainName]_ddMonthyyyy_time.C
2273 gSystem->Exec("date +%d%b%Y_%Hh%M > date.tmp");
2274 ifstream fdate("date.tmp");
2275 if (!fdate.is_open()) {
2276 ::Error("AnalysisTrainPWG4Jets.C::Export","Could not generate file name");
2279 const char date[64];
2280 fdate.getline(date,64);
2282 gSystem->Exec("rm date.tmp");
2283 kTrainName = Form("train_%s_%s", kTrainName.Data(), date);
2285 kTrainName = Form("train_%s", kTrainName.Data());
2287 TString cdir = gSystem->WorkingDirectory();
2288 gSystem->MakeDirectory(kTrainName);
2289 gSystem->ChangeDirectory(kTrainName);
2291 out.open(Form("%sConfig.C",kTrainName.Data()), ios::out);
2293 ::Error("AnalysisTrainPWG4Jets.C::Export", "Cannot open ConfigTrain.C for writing");
2297 out << " kTrainName = " << "\"" << kTrainName.Data() << "\";" << endl;
2298 out << " kProofCluster = " << "\"" << kProofCluster.Data() << "\";" << endl;
2299 out << " kProofUseAFPAR = " << kProofUseAFPAR << ";" << endl;
2301 out << " kProofAFversion = " << kProofAFversion.Data() << ";" << endl;
2302 out << " kProofDataSet = " << "\"" << kProofDataSet.Data() << "\";" << endl;
2303 out << " kPluginUse = " << kPluginUse << ";" << endl;
2304 out << " kUsePAR = " << kUsePAR << ";" << endl;
2305 out << " kUseCPAR = " << kUseCPAR << ";" << endl;
2306 out << " kPluginRootVersion = " << "\"" << kPluginRootVersion.Data() << "\";" << endl;
2307 out << " kPluginAliRootVersion = " << "\"" << kPluginAliRootVersion.Data() << "\";" << endl;
2308 out << " kGridDatadir = " << "\"" << kGridDatadir.Data() << "\";" << endl;
2309 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
2310 out << " kGridOutdir = " << "\"" << kGridOutdir.Data() << "\";" << endl;
2311 out << " kGridMaxMergeFiles = " << kGridMaxMergeFiles << ";" << endl;
2312 out << " kGridMergeExclude = " << "\"" << kGridMergeExclude.Data() << "\";" << endl;
2313 out << " kGridRunsPerMaster = " << kGridRunsPerMaster << ";" << endl;
2314 out << " kGridFilesPerJob = " << kGridFilesPerJob << ";" << endl;
2315 out << " kGridRunRange[0] = " << kGridRunRange[0] << ";" << endl;
2316 out << " kGridRunRange[1] = " << kGridRunRange[1] << ";" << endl;
2317 out << " kUseDebug = " << kUseDebug << ";" << endl;
2318 out << " kUseMC = " << kUseMC << ";" << endl;
2319 out << " kUseESDTags = " << kUseESDTags << ";" << endl;
2320 out << " kUseKinefilter = " << kUseKinefilter << ";" << endl;
2321 out << " kUseTR = " << kUseTR << ";" << endl;
2322 out << " kUseAODTags = " << kUseAODTags << ";" << endl;
2323 out << " kSaveTrain = " << "kFALSE;" << endl << endl;
2324 out << " // Analysis modules" << endl;
2325 out << " iAODanalysis = " << iAODanalysis << ";" << endl;
2326 out << " iAODhandler = " << iAODhandler << ";" << endl;
2327 out << " iESDfilter = " << iESDfilter << ";" << endl;
2328 out << " iJETAN = " << iJETAN << ";" << endl;
2329 out << "// Configuration fot the wagons" << endl;
2331 ::Info("AnalysisTrainPWG4Jets.C::WriteConfig", "Train configuration wrote to file %s", Form("config_%s.C", kTrainName.Data()));
2332 gSystem->ChangeDirectory(cdir);
2335 //______________________________________________________________________________
2336 Bool_t LoadConfig(const char *filename)
2338 // Read train configuration from file
2339 if (gSystem->AccessPathName(filename)) {
2340 ::Error("AnalysisTrainPWG4Jets.C::LoadConfig", "Config file name not found");
2343 gROOT->ProcessLine(Form(".x %s", filename));
2344 ::Info("AnalysisTrainPWG4Jets.C::LoadConfig", "Train configuration loaded from file %s", filename);
2349 Printf(">>> Patching JDL");
2350 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
2351 AliAnalysisAlien* gridHandler = (AliAnalysisAlien*)mgr->GetGridHandler();
2352 TGridJDL *jdl = gridHandler->GetGridJDL();
2353 if(iJETAN)jdl->AddToPackages("fastjet","v2.4.0");
2354 gridHandler->WriteJDL(kFALSE);
2355 Printf("<<< Patching JDL");
2359 Bool_t PatchAnalysisMacro(){
2360 Printf(">>> Patching AnalysisMacro");
2361 gSystem->Exec(Form("mv %s.C %s.C_tmp",kTrainName.Data(),kTrainName.Data()));
2364 in1.open(Form("%s.C_tmp", kTrainName.Data()));
2367 while(in1.getline(cLine,250)){
2372 index = st.Index("gSystem->Load(\"libPhysics\");");
2373 index += strlen("gSystem->Load(\"libPhysics\");");
2377 arr = anaLibs.Tokenize(" ");
2380 add += "\n\n // added by CKB \n";
2381 while ((objstr=(TObjString*)next())){
2382 if(objstr->GetString().Contains("PWG3"))continue;
2383 if(objstr->GetString().EndsWith(".so"))add += Form("gSystem->Load(\"%s\");\n",objstr->GetString().Data());
2387 // add += Form("AliLog::SetGlobalLogLevel(%d);\n",AliLog::GetGlobalLogLevel());
2390 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2391 add += "\n\n // added by CKB \n";
2392 if(kErrorIgnoreLevel>0)add += Form("gErrorIgnoreLevel = %d;\n",kErrorIgnoreLevel);
2393 add += "\n gSystem->AddIncludePath(\"./\"); \n";
2394 add += "\n gSystem->SetFPEMask(); \n";
2397 if(gGrid&&kPluginAliRootVersion.Length()==0){
2399 add += "\n // Dirty hack for TRD reference data \n";
2400 add += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2401 add += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2406 add += "// BKC \n\n";
2407 st.Insert(index,add.Data());
2410 // st.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
2413 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
2414 index = st.Index("gSystem->AddIncludePath(\"-I$"); // uncommen $ALICE_ROOT include for par files
2415 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2416 st.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2419 if(AliLog::GetGlobalLogLevel()==AliLog::kFatal){
2420 index = st.Index("AliLog::SetGlobal"); // ncomment setting of log level, do my own
2421 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2422 st.Insert(index,"AliLog::SetGlobalLogLevel(AliLog::kFatal);// CKB \n // CKB comment out for own setting \n //");
2426 out.open(Form("%s.C", kTrainName.Data()));
2431 Printf("<<< Patching AnalysisMacro");
2437 Printf(">>> Patching Merge Macro");
2438 gSystem->Exec(Form("mv %s_merge.C %s_merge.C_tmp",kTrainName.Data(),kTrainName.Data()));
2441 in2.open(Form("%s_merge.C_tmp", kTrainName.Data()));
2443 while(in2.getline(cLine,250)){
2447 index = st2.Index("gSystem->Load(\"libPhysics\");");
2448 index += strlen("gSystem->Load(\"libPhysics\");");
2450 add2 += "\n gSystem->AddIncludePath(\"./\"); \n";
2451 if(gGrid&&kPluginAliRootVersion.Length()==0){
2453 add2 += "\n // Dirty hack for TRD reference data \n";
2454 add2 += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2455 add2 += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2459 add2 += "// BKC \n\n";
2460 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2461 st2.Insert(index,add.Data());
2465 // st2.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
2468 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
2469 index = st2.Index("gSystem->AddIncludePath(\"-I$"); // uncomment $ALICE_ROOT include for par files
2470 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2471 st2.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2474 // do not exclude the extra files from merign, this is done explicitly in this train script
2475 // index = st2.Index("mergeExcludes +="); // uncommen $ALICE_ROOT include for par files
2476 // if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2477 // st2.Insert(index,"// CKB comment out, handled explicitly by the train macro \n //");
2481 out2.open(Form("%s_merge.C", kTrainName.Data()));
2485 out2 << st2 << endl;
2486 Printf("<<< Patching Merging Macro");