1 //===================== ANALYSIS TRAIN =========================================
2 // To use: copy this macro to your work directory, modify the global part to match
3 // your needs, then run root.
4 // root[0] .L AnalysisTrain.C
5 // Grid full mode as below (other modes: test, offline, submit, terminate)
6 // root[1] AnalysisTrainPWG-244Jets("grid", "full")
7 // CAF mode (requires root v5-23-02 + aliroot v4-16-Rev08)
8 // root[2] AnalysisTrainPWG4Jets("proof")
9 // Local mode requires AliESds.root or AliAOD.root in ./data directory
10 // root[3] AnalysisTrainPWG4Jets("local")
11 // In proof and grid modes, a token is needed and sourcing the produced environment file.
13 // If 'saveTrain' flag is set, the train will generate a directory name and run
14 // in this directory. A configuration file 'ConfigTrain.C' will be generated.
15 // One can replay at any time the train via:
16 // root[1] AnalysisTrainPWG4Jets(ana_mode, plugin_mode, "train_default_<date>/ConfigTrain.C")
18 // For Usage with fastjet run in "offline" first and then "submit"
19 // jdl and analysismacro are automatically patched after "offline" mode
21 // =============================================================================
22 // ### General Steering variables
23 // =============================================================================
24 //== general setup variables
26 TString kTrainName = "testAnalysis"; // *CHANGE ME* (no blancs or special characters)
27 TString kJobTag = "PWGJE Jet Tasks analysis train configured"; // *CHANGE ME*
29 // Usage of par files ONLY in grid mode and ONLY if the code is not available
30 // in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
31 // To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
33 Bool_t kUsePAR = kFALSE; // use par files for extra libs
34 Bool_t kUseCPAR = kFALSE; // use par files for common libs
35 Bool_t kFillAOD = kTRUE; // switch of AOD filling for on the fly analysis
36 Bool_t kFilterAOD = kTRUE;
37 Float_t kJetTriggerPtCut = 20; // pT for jet trigger in case of iFilter==2
38 Int_t kSaveAOD = 8; // Bit switch 1 = Full AOD 2 = Jet AOD , 4 = PartCorr, 8 = JCORRAN
39 //== general input and output variables
41 Int_t iAODanalysis = 1; // Analysis on input AOD's
42 Int_t iFilterAnalysis = 0; // Analysis on input AOD's
43 Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
44 Int_t iCentralitySelection = 0; // Use the centrality
45 Int_t iESDfilter = 1; // ESD to AOD filter (barrel + muon tracks)
46 Int_t iPhysicsSelection = 1; // ESD to AOD filter (barrel + muon tracks)
47 UInt_t iPhysicsSelectionFlag = 1; // set by pyshics selection and passed to the task, kMB, kUserDefined etc
48 Bool_t useTender = kFALSE; // use tender wagon
49 Bool_t kUseKinefilter = kFALSE; // use Kinematics filter
50 Bool_t kUseMuonfilter = kFALSE; // use Kinematics filter
51 TString kCommonOutputFileName = "PWGJE_JetTasksOutput.root";
52 TString kCaloQAOutputFileName = "PWGJE_CaloQAOutput.root";
55 //== general process variables
57 // ### Other flags to steer the analysis
58 //==============================================================================
59 Bool_t kSkipTerminate = kTRUE; // Do not call Teminate
60 Bool_t kUseDate = kFALSE; // use date in train name
61 Bool_t kUseDebug = kTRUE; // activate debugging
62 Int_t kErrorIgnoreLevel = -1; // takes the errror print level from .rootrc
64 // const Int_t kUnset = -1;
65 // const Int_t kPrint = 0;
66 // const Int_t kInfo = 1000;
67 // const Int_t kWarning = 2000;
68 // const Int_t kError = 3000;
69 // const Int_t kBreak = 4000;
70 // const Int_t kSysError = 5000;
71 // const Int_t kFatal = 6000;
72 Int_t kUseSysInfo = 0; // activate debugging
73 Long64_t kNumberOfEvents = 1234567890; // Number of events to process from the chain
74 Bool_t kUseMC = kTRUE; // use MC info
75 Bool_t kIsMC = kTRUE; // is MC info, if false it overwrites Use(AOD)MC
76 Bool_t kUseAODMC = kTRUE; // use MC infA
77 Bool_t kUseESDTags = kFALSE; // use ESD tags for selection
78 Bool_t kUseTR = kFALSE; // use track references
79 Bool_t kUseAODTags = kFALSE; // use AOD tags
80 Bool_t kSaveTrain = kFALSE; // save train configuration as:
81 Bool_t kIsPbPb = kFALSE; // Pb+Pb
84 // ### Analysis modules to be included. Some may not be yet fully implemented.
85 //==============================================================================
86 Int_t iJETAN = 1; // Jet analysis // 1 write standard 2 write non-standard jets, 3 wrtie both
87 Int_t iJETANReader = 0; // Jet analysis // DEV
88 Int_t iJETANFinder = 0; // Jet analysis // DEV
89 Int_t iJETSUBTRACT = 1; // Jet background subtration
90 TList kJetListSpectrum; // list of jets contains TObjString of possible jet finder names
91 TExMap kJetMapSpectrum; // Maps the jet finder pairs to be used in the spectrum task second number negative no pair other wise (j1+1) + (1000 * (j2+1)) +10000 * (j3+1)
92 TExMap kJetBackMapSpectrum; // Maps the jet finder pairs with the background branch used, just for countint of trackrefs
93 Int_t kJetMapOffset[3] = {10000,100,1};
94 TString kDefaultJetBranch = ""; // is currently set when filled (iJETAN or clusters) or from config macro
95 TString kDefaultJetBackgroundBranch = ""; // is currently set when filled (jet clsuters
96 TString kDefaultJetBackgroundBranchCut1 = ""; // is currently set when filled (jet clsuters
97 TString kDefaultJetBackgroundBranchCut2 = ""; // is currently set when filled (jet clsuters
98 TString kDefaultJetBackgroundBranch_extra = ""; // is currently set when filled (jet clsuters)
99 TString kJetSubtractBranches = ""; // is currently set when filled (jet clsuters
100 TString kJetSubtractBranchesCut1 = ""; // is currently set when filled (jet clsuters
101 TString kJetSubtractBranchesCut2 = ""; // is currently set when filled (jet clsuters
102 TString kJetSubtractBranches_extra = ""; // is currently set when filled (jet clsuters
104 TString kDefaultJetBranchMC = ""; // is currently set when filled (iJETAN or clusters) or from config macro
105 TString kDefaultJetBackgroundBranchMC = ""; // is currently set when filled (jet clsuters
106 TString kDefaultJetBranchMC2 = ""; // is currently set when filled (iJETAN or clusters) or from config macro
107 TString kDefaultJetBackgroundBranchMC2 = ""; // is currently set when filled (jet clsuters
108 TString kJetSubtractMask1 = "B0";
109 TString kJetSubtractMask2 = "B%d";
112 Int_t iJETANdevLib = 0;
113 Int_t iPWGPPQASym = 0; // Eva's QA task compiled on the fly...
114 Int_t iPWG4FastEmbedding = 0; // Generate non-standard AOD for embedding
115 Int_t iPWG4JetTasks = 0; // all jet tasks flag for lib laoding
116 Int_t iPWG4JetServices = 0; // jet spectrum analysis
117 Int_t iPWG4JetSpectrum = 0; // jet spectrum analysis
118 Int_t iPWG4JetResponse = 0; // jet response matrix
119 Int_t iPWG4JCORRAN = 0; // JCORRAN module
120 Int_t iPWG4UE = 0; // Underlying Event analysis
121 Int_t iPWG4LeadingUE = 0; // Underlying Event analysis
122 Int_t iPWG4CorrectionsUE = 0; // Underlying Event analysis
123 Int_t iPWG4TmpSourceSara = 0; // Underlying Event analysis not in svn
124 Int_t iPWG4Fragmentation = 1; // Official Fragmentation
125 Int_t iPWG4JetChem = 0; // Jet chemistry
126 Int_t iPWG4PtQAMC = 0; // Marta's QA tasks
127 Int_t iPWG4PtTrackQA = 0; // Marta's QA tasks
128 Int_t iPWG4PtSpectra = 0; // Marta's QA tasks
129 Int_t iPWG4PtQATPC = 0; // Marta's QA tasks
130 Int_t iPWG4Cosmics = 0; // Marta's Cosmics Taks
131 Int_t iPWG4ThreeJets = 0; // Sona's thrust task
132 Int_t iPWG4QGSep = 0; // Sona's QG Separation task
133 Int_t iPWG4Minijet = 0; // Eva's Mini Jet Task cluster task
134 Int_t iPWG4KMeans = 0; // Andreas' KMeans task
135 Int_t iPWG4Cluster = 0; // CKB cluster task
136 Int_t iEMCUtilLibs = 0; // Flag to satisfy dependence on EMC utils
137 Int_t iPWG4PartCorrLibs = 0; // Gustavo's part corr analysis
138 Int_t iPWG4PartCorr = 0; // Gustavo's part corr analysis
139 Int_t iPWG4CaloQA = 0; // Gustavo's part corr analysis
140 Int_t iPWG4JetCorr = 0; // Paul's jet corr analysis
141 Int_t iPWG4Tagged = 0; // Gustavo's part corr analysis
142 Int_t iPWG4omega3pi = 0; // Omega to 3 pi analysis (PWG4)
143 Int_t iPWG4GammaConvLib = 0; // Gamma Conversio
144 Int_t iPWG4GammaConv = 0; // Gamma Conversio
145 Int_t iPWG4CaloConv = 0; // Gamma Conversio
146 Int_t kHighPtFilterMask = 32; // change depending on the used AOD Filter
147 TString kDeltaAODJetName = "AliAOD.Jets.root";
148 TString kDeltaAODJetNameInput = "";
149 TString kDeltaAODJCORRANName = "AliAOD.JCORRAN.root";
150 TString kDeltaAODPartCorrName = "AliAOD.PartCorr.root";
151 TString kFastEmbeddingAOD = "emb/AliAOD.root";
152 TString kFastEmbAODList = "";
154 //==============================================================================
155 // ### PROOF Steering varibales
156 //==============================================================================
157 //== proof setup variables
158 TString kProofCluster = "alicecaf.cern.ch";
159 Bool_t kProofUseAFPAR = kFALSE; // use AF special par file
160 TString kProofAFversion = "AF-v4-17";
161 //== proof input and output variables
162 TString kProofDataSet = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
163 Bool_t kProofSaveToAlien = kFALSE; // save proof outputs in AliEn train_[trainName]_ddMonthyyyy_time.C
164 TString kProofOutdir = "";
165 Bool_t kProofClearPackages = kFALSE;
166 Int_t kProofEvents = 10000;
167 Int_t kProofOffset = 0;
168 //== proof process variables
171 //==============================================================================
172 // ### Grid plugin Steering varibiables
173 //==============================================================================
174 //== grid plugin setup variables
175 Bool_t kPluginUse = kTRUE; // do not change
176 Bool_t kPluginUseProductionMode = kFALSE; // use the plugin in production mode
177 TString kPluginRootVersion = "v5-30-02"; // *CHANGE ME IF MORE RECENT IN GRID*
178 TString kPluginAliRootVersion = "v4-21-01a-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
179 Bool_t kPluginMergeViaJDL = kTRUE; // merge via JDL
180 Bool_t kPluginFastReadOption = kFALSE; // use xrootd tweaks
181 Bool_t kPluginOverwriteMode = kTRUE; // overwrite existing collections
182 Int_t kPluginOutputToRunNumber = 1; // write the output to subdirs named after run number
183 // TString kPluginExecutableCommand = "root -b -q";
184 TString kPluginExecutableCommand = "source /Users/kleinb/setup_32bit_aliroot_trunk_clean_root_trunk.sh; alienroot -b -q ";
186 // == grid plugin input and output variables
187 TString kGridDatadir = "/alice/sim/PDC_08b/LHC09a1/AOD/";
188 Int_t kGridMaxRunsFromList = 999999999;
189 Int_t kGridOffsetRunFromList = 0; // skip the first n runs from the list
190 TString kGridLocalRunList = "";
191 TString kGridOutdir = ""; // AliEn output directory. If blank will become output_<kTrainName>
192 TString kGridDataSet = ""; // sub working directory not to confuse different run xmls
193 TString kGridExtraAliendirLevel = ""; // sub working directory not to confuse different run xmls
194 Int_t kGridRunRange[2] = {0, -1}; // Set the run range
195 TString kGridRunPattern = "%03d"; // important for leading zeroes!!
196 TString kGridPassPattern = "";
197 TString kGridExtraFiles = ""; // files that will be added to the input list in the JDL...
198 Int_t kGridMaxMergeFiles = 25; // Number of files merged in a chunk grid run range
199 TString kGridMergeExclude = "AliAOD.root"; // Files that should not be merged
200 TString kGridOutputStorages = "disk=2"; // Make replicas on the storages
201 // == grid process variables
202 Int_t kGridRunsPerMaster = 100; // Number of runs per master job
203 Int_t kGridFilesPerJob = 100; // Maximum number of files per job (gives size of AOD)
205 //==============================================================================
206 // ### Local Steering variables
207 //==============================================================================
208 //== local setup variables
209 //== local input and output variables
210 TString kLocalXMLDataset = ""; // Change local xml dataset for local interactive analysis
211 TString kLocalDataList = "local_deltaaod.txt"; // Change local xml dataset for local interactive analysis
212 // == local process variables
214 TString kPluginMode = "";
215 TString kAnalysisMode = "";
219 TString anaPars = "";
220 TString anaLibs = "";
221 TString anaLibsExtra = "";
222 TString anaSources = "";
223 // Function signatures
224 class AliAnalysisAlien;
225 class AliAnalysisManager;
227 //______________________________________________________________________________
228 void AnalysisTrainPWGJets(const char *analysis_mode="local",
229 const char *plugin_mode="",
230 const char *config_file="",Int_t iOffset = 0,Int_t iTotal = 0)
232 // Main analysis train macro. If a configuration file is provided, all parameters
233 // are taken from there but may be altered by CheckModuleFlags.
235 // these flag may be needed by the config file
236 kPluginMode = plugin_mode;
237 kAnalysisMode = analysis_mode;
239 if (strlen(config_file) && !LoadConfig(config_file)) return;
240 if(iTotal>0)kGridMaxRunsFromList = iTotal; // overwrites the settings from config file
241 if(iOffset)kGridOffsetRunFromList = iOffset;
242 if(iOffset)kProofOffset = iOffset;
245 TString smode(analysis_mode);
247 if (kSaveTrain)WriteConfig();
248 // Check compatibility of selected modules
249 CheckModuleFlags(smode);
250 // gROOT->ProcessLine(".trace");
252 printf("==================================================================\n");
253 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", kTrainName.Data(),smode.Data());
254 printf("==================================================================\n");
255 printf("= Configuring analysis train for: =\n");
256 if (iAODanalysis) printf("= AOD analysis =\n");
257 else printf("= ESD analysis =\n");
258 if (iPhysicsSelection) printf("= Physics selection =\n");
259 if(iCentralitySelection)printf("= Centrality selection =\n");
260 if (useTender) printf("= Using tender =\n");
261 if (iESDfilter) printf("= ESD filter =\n");
262 if (iJETAN) printf("= Jet analysis =\n");
263 if (iJETANReader) printf("= Jet analysis Reader (DEV) =\n");
264 if (iJETANFinder) printf("= Jet analysis Finder (DEV) =\n");
265 printf("==================================================================\n");
267 char *printMask = ":: %20s %10d\n";
268 printf(printMask,"Fill AOD",(UInt_t)kFillAOD);
269 printf(printMask,"Save AOD", (UInt_t)kSaveAOD);
270 printf(printMask,"MC truth", (UInt_t)kUseMC);
271 printf(printMask,"KINE filter", (UInt_t)kUseKinefilter);
272 printf(printMask,"track refs", (UInt_t)kUseTR);
273 printf(printMask,"tags", (UInt_t)kUseESDTags);
274 printf(printMask,"AOD tags", (UInt_t)kUseAODTags);
275 printf(printMask,"debugging", (UInt_t)kUseDebug);
276 printf(printMask,"PAR files", (UInt_t)kUsePAR);
277 printf(printMask,"AliEn plugin", (UInt_t)kPluginUse);
278 printf(printMask,"JETAN subtract", (UInt_t)iJETSUBTRACT);
279 printf(printMask,"PWGPP QA sym", iPWGPPQASym);
280 printf(printMask,"PWG4 Source Sara",iPWG4TmpSourceSara);
281 printf(printMask,"PWG4 Fragmentation",iPWG4Fragmentation);
282 printf(printMask,"PWG4 Jet Chem",iPWG4JetChem);
283 printf(printMask,"PWG4 Jet tasks",iPWG4JetTasks);
284 printf(printMask,"PWG4 Jet Services",iPWG4JetServices);
285 printf(printMask,"PWG4 Jet Spectrum",iPWG4JetSpectrum);
286 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
287 printf(printMask,"PWG4 UE",iPWG4UE);
288 printf(printMask,"PWG4 Leading UE",iPWG4LeadingUE);
289 printf(printMask,"PWG4 Corrections UE",iPWG4CorrectionsUE);
290 printf(printMask,"PWG4 Pt QA MC",iPWG4PtQAMC);
291 printf(printMask,"PWG4 Pt QA track",iPWG4PtTrackQA);
292 printf(printMask,"PWG4 Pt Spectra",iPWG4PtSpectra);
293 printf(printMask,"PWG4 Pt QA TPC",iPWG4PtQATPC);
294 printf(printMask,"PWG4 Cosmics",iPWG4Cosmics);
295 printf(printMask,"PWG4 Three Jets",iPWG4ThreeJets);
296 printf(printMask,"PWG4 QGSep",iPWG4QGSep);
297 printf(printMask,"PWG4 Minijet",iPWG4Minijet);
298 printf(printMask,"PWG4 KMeans",iPWG4KMeans);
299 printf(printMask,"PWG4 Cluster",iPWG4Cluster);
300 printf(printMask,"PWG4 Part Corr",iPWG4PartCorr);
301 printf(printMask,"PWG4 Calo QA",iPWG4CaloQA);
302 printf(printMask,"PWG4 Jet Corr",iPWG4JetCorr);
303 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
304 printf(printMask,"PWG4 Tagged",iPWG4Tagged);
305 printf(printMask,"PWG4 omega to 3 pi ",iPWG4omega3pi);
306 printf(printMask,"PWG4 Gamma Conv",iPWG4GammaConv);
307 printf(printMask,"PWG4 Calo Conv",iPWG4CaloConv);
308 printf(printMask,"HighPt FilterMask",kHighPtFilterMask);
310 //==========================================================================
311 // Connect to back-end system
312 if (!Connect(smode)) {
313 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
317 // Load common libraries and set include path
318 if (!LoadCommonLibraries(smode)) {
319 ::Error("AnalysisTrain", "Could not load common libraries");
327 // Make the analysis manager and connect event handlers
328 AliAnalysisManager *mgr = new AliAnalysisManager("PWG4Train", "pwg4 mini train");
329 if (kCommonOutputFileName.Length()>0)mgr->SetCommonFileName(kCommonOutputFileName.Data());
330 if (kProofSaveToAlien) mgr->SetSpecialOutputLocation(kProofOutdir);
332 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
333 if (kUseSysInfo)mgr->SetNSysInfo(kUseSysInfo);
334 mgr->SetSkipTerminate(kSkipTerminate);
336 // Load analysis specific libraries
337 if (!LoadAnalysisLibraries(smode)) {
338 ::Error("AnalysisTrain", "Could not load analysis libraries");
342 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/ConfigLegoTrainPWGJE.C");
343 ConfigLegoTrainPWGJE(1008);
344 // Create input handler (input container created automatically)
347 AliAODInputHandler *aodH = new AliAODInputHandler();
348 mgr->SetInputEventHandler(aodH);
349 if (kDeltaAODJetNameInput.Length()){
350 Printf("Adding Friend %s",kDeltaAODJetNameInput.Data());
351 aodH->AddFriend(kDeltaAODJetNameInput.Data());
353 // if (iPWG4PartCorr) aodH->AddFriend(Form("deltas/%s"kDeltaAODJetName.Data()));
356 AliESDInputHandler *esdHandler = new AliESDInputHandler();
357 if (kUseESDTags) esdHandler->SetReadTags();
358 esdHandler->SetReadFriends(kFALSE);
359 mgr->SetInputEventHandler(esdHandler);
360 // if(iPWG4PtQATPC&& !kTrainName.Contains("pass5"))esdHandler->SetActiveBranches("ESDfriend");
366 // Monte Carlo handler
367 if (kUseMC && !iAODanalysis) {
368 AliMCEventHandler* mcHandler = new AliMCEventHandler();
369 mgr->SetMCtruthEventHandler(mcHandler);
370 mcHandler->SetReadTR(kUseTR);
372 // AOD output container, created automatically when setting an AOD handler
374 // AOD output handler
375 AliAODHandler* aodHandler = new AliAODHandler();
376 aodHandler->SetOutputFileName("AliAOD.root");
377 aodHandler->SetFillAODforRun(kFillAOD);
379 mgr->SetOutputEventHandler(aodHandler);
380 AliAnalysisDataContainer * cout_aod = mgr->GetCommonOutputContainer();
381 cout_aod->SetSpecialOutput();
383 // Debugging if needed
386 mgr->SetDebugLevel(3);
389 mgr->RegisterExtraFile("syswatch.root");
390 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
391 kGridMergeExclude += "syswatch.root";
394 AliLog::SetGlobalLogLevel(AliLog::kError);
398 //==========================================================================
399 // Create the chain. In this example it is created only from ALIEN files but
400 // can be done to work in batch or grid mode as well.
401 TChain *chain = CreateChain(smode, plugin_mode);
403 //==========================================================================
404 // Load the tasks configuration macros for all wagons. These files are supposed now to be
405 // in the current workdir, but in AliEn they will be in the file catalog,
406 // mapped from AliRoot and pecified in the jdl input list.
408 // For now connection to top input container and common AOD output container
409 // is done in this macro, but in future these containers will be connected
410 // from each task configuration macro.
413 // Tender and supplies. Needs to be called for every event.
417 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/TenderSupplies/AddTaskTender.C");
418 AliAnalysisTaskSE *tender = AddTaskTender(kTRUE);
419 // tender->SelectCollisionCandidates();
420 tender->SetDebugLevel(2);
424 Float_t fTrackEtaWindow = 0.9;
425 Float_t fJetEtaWindow = 0.5;
426 Float_t fVertexWindow = 10;
428 if(kIsPbPb){// for pass1
429 Float_t fTrackEtaWindow = 0.8;
430 Float_t fJetEtaWindow = 0.4;
435 if(iPhysicsSelection && !iAODanalysis){
436 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
437 Int_t iTriggerHIC = 0;
438 Bool_t rejectBkg = true;
441 rejectBkg = false; // for the moment...
443 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kIsMC,true,rejectBkg);
445 // mgr->RegisterExtraFile("event_stat.root");
446 mgr->AddStatisticsTask();
449 iPhysicsSelectionFlag = AliVEvent::kMB;
452 if(kIsPbPb&&!iAODanalysis){
454 // has to run before AOD filter
455 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskCentrality.C");
456 AliCentralitySelectionTask *taskC = AddTaskCentrality();
457 if (!taskC) ::Warning("AnalysisTrainPWG4Jets", "AliCentralitySelectionTask cannot run for this train conditions - EXCLUDED");
460 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskEventplane.C");
461 AliEPSelectionTask *taskEP = AddTaskEventplane();
462 if (!taskEP) ::Warning("AnalysisTrainPWG4Jets", "AliEventplan cannot run for this train conditions - EXCLUDED");
465 if (iESDfilter && !iAODanalysis) {
466 // ESD filter task configuration.
467 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskESDFilterPWGJETrain.C");
468 // switch on centrality make for PbPb
469 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilterPWGJETrain(kUseKinefilter); // carefull, if physics selection is enabled you may get not primary vertex pointer later on...
470 taskesdfilter->SetEnableFillAOD(!kFilterAOD);
471 taskesdfilter->DisableV0s();
472 taskesdfilter->DisableCascades();
473 taskesdfilter->DisableKinks();
474 taskesdfilter->DisablePmdClusters();
475 taskesdfilter->DisableCaloClusters();
476 taskesdfilter->DisableCells();
479 mgr->RegisterExtraFile("pyxsec_hists.root");
480 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
481 kGridMergeExclude += "pyxsec_hists.root";
488 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
489 mgr->AddTask(tagTask);
490 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
491 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
492 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
493 mgr->ConnectOutput(tagTask, 1, coutTags);
496 if (iPWG4FastEmbedding) {
497 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskFastEmbedding.C");
498 AliAnalysisTaskFastEmbedding *taskEmbedding = 0;
499 if(kFastEmbAODList.Length()) taskEmbedding = AddTaskFastEmbedding(kFastEmbAODList, 1);
500 else taskEmbedding = AddTaskFastEmbedding(kFastEmbeddingAOD, 0);
501 taskEmbedding->SetJetBranch("jetsAOD_UA104_B0_Filter00256_Cut01000");
502 // taskEmbedding->SetEvtSelecMode(AliAnalysisTaskFastEmbedding::kEventsAll);
503 // taskEmbedding->SetDebugLevel(10);
508 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJets.C");
509 AliAnalysisTaskJets *taskjets = 0;
512 taskjets = AddTaskJets(kHighPtFilterMask);
513 taskjets->SetName("StandardJets");
514 taskjets->SetNonStdBranch("");
518 // Set only few jet finders backgroudn subtraction w an wo
520 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
521 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
523 cTmp = taskjets->GetNonStdBranch();
524 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
526 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,2.,0); // no background subtraction
527 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
529 cTmp = taskjets->GetNonStdBranch();
530 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
533 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
535 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
536 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
537 cTmp = taskjets->GetNonStdBranch();
538 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
539 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,2.,2); // background subtraction
540 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
541 cTmp = taskjets->GetNonStdBranch();
542 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
549 taskjets = AddTaskJets("AOD","SISCONE",0.4,kHighPtFilterMask,0.15,0); //no background subtraction to be done later....
550 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
551 cTmp = taskjets->GetNonStdBranch();
552 if(cTmp.Length()>0)kJetSubtractBranches += Form("%s ",cTmp.Data());
553 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
556 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
558 taskjets = AddTaskJets("AODMC","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
559 cTmp = taskjets->GetNonStdBranch();
560 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
561 taskjets = AddTaskJets("AODMC2","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
562 cTmp = taskjets->GetNonStdBranch();
563 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
566 taskjets = AddTaskJets("AODMC","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
567 cTmp = taskjets->GetNonStdBranch();
568 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
569 taskjets = AddTaskJets("AODMC2","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
570 cTmp = taskjets->GetNonStdBranch();
571 if(cTmp.Length())kJetListSpectrum.Add(new TObjString(cTmp.Data()));
574 if(kDeltaAODJetName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJetName.Data());
576 if (!taskjets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
581 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJetsReader.C");
582 AliAnalysisTaskJetsReader *taskjets = 0;
585 AliAnalysisDataContainer* cont_jet1 = AddJetExchangeContainer("jets_1");
586 taskjets = AddTaskJetsReader(cont_jet1,kHighPtFilterMask);
590 AliAnalysisDataContainer* cont_jet1 = AddJetExchangeContainer("jets_1");
591 taskjets = AddTaskJetsReader(cont_jet1,"AOD",kHighPtFilterMask,0.15);
594 AliAnalysisDataContainer* cont_jet2 = AddJetExchangeContainer("jets_2");
595 taskjets = AddTaskJetsReader(cont_jet2,"AOD", kHighPtFilterMask,1.);
599 taskjets->GetJetReader()->GetReaderHeader()->SetIsHighMult(kIsPbPb);
602 if ( !taskjets ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetsReader cannot run for this train conditions - EXCLUDED");
606 if (iJETANFinder && iJETANReader) {
607 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJetsFinder.C");
608 AliAnalysisTaskJetsFinder *taskjetsFinder = 0;
611 taskjetsFinder = AddTaskJetsFinder(cont_jet1);
615 taskjetsFinder = AddTaskJetsFinder(cont_jet1,"UA1",0.4,0); // UA1 no bkg subtraction (reader: jet_1)
616 taskjetsFinder = AddTaskJetsFinder(cont_jet1,"FASTJET",0.4,1); // FASTJET B1 (reader: jet_1)
618 taskjetsFinder = AddTaskJetsFinder(cont_jet2,"FASTJET",0.4,0); // FASTJET B0 (reader: jet_2)
621 if ( !taskjetsFinder || !taskjets ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetsFinder cannot run for this train conditions - EXCLUDED");
625 if (iPWG4FastEmbedding && iJETAN) {
626 AliAnalysisTaskJets *taskEmbJets = AddTaskJets("AODextra", "FASTJET", 0.4, kHighPtFilterMask);
627 taskEmbJets->ReadAODFromOutput();
628 kJetSubtractBranches_extra += Form("%s ", taskEmbJets->GetNonStdBranch());
630 taskEmbJets = AddTaskJets("AODextraonly", "FASTJET", 0.4, kHighPtFilterMask);
631 taskEmbJets->ReadAODFromOutput();
633 taskEmbJets = AddTaskJets("AODextra", "UA1", 0.4, kHighPtFilterMask,1.,0);
634 taskEmbJets->ReadAODFromOutput();
635 taskEmbJets = AddTaskJets("AODextraonly", "UA1", 0.4, kHighPtFilterMask,1.,0);
636 taskEmbJets->ReadAODFromOutput();
637 taskEmbJets = AddTaskJets("AODextra", "UA1", 0.4, kHighPtFilterMask,1.,2);
638 taskEmbJets->ReadAODFromOutput();
642 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJetCluster.C");
643 AliAnalysisTaskJetCluster *taskCl = 0;
653 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow,0); // this one is for the background and random jets, random cones with no skip
654 taskCl->SetBackgroundCalc(kTRUE);
655 taskCl->SetNRandomCones(1);
656 // taskCl->SetDebugLevel(11);
657 taskCl->SetCentralityCut(fCenLo,fCenUp);
659 taskCl->SetJetTypes(1<<0|1<<2|1<<3);
660 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
661 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
662 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),0)));
663 kJetListSpectrum.Add(new TObjString(Form("%sRandomCone_random",taskCl->GetJetOutputBranch())));
665 kJetSubtractBranches += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomConeSkip00");
666 kJetSubtractBranches += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomCone_random");
668 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),1.0,fTrackEtaWindow,fVertexWindow,0); // this one is for the background and random jets, random cones with no skip
669 taskCl->SetNRandomCones(1);
670 taskCl->SetBackgroundCalc(kTRUE);
671 taskCl->SetCentralityCut(fCenLo,fCenUp);
672 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
674 taskCl->SetJetTypes(1<<0|1<<2|1<<3);
675 kDefaultJetBackgroundBranchCut1 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
676 kJetSubtractBranchesCut1 += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomConeSkip00");
677 kJetSubtractBranchesCut1 += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomCone_random");
678 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
679 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),0)));
680 kJetListSpectrum.Add(new TObjString(Form("%sRandomCone_random",taskCl->GetJetOutputBranch())));
682 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),2.0,fTrackEtaWindow,fVertexWindow,0); // this one is for the background and random jets, random cones with no skip
683 taskCl->SetNRandomCones(1);
684 taskCl->SetBackgroundCalc(kTRUE);
685 taskCl->SetCentralityCut(fCenLo,fCenUp);
686 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
688 taskCl->SetJetTypes(1<<0|1<<2|1<<3);
689 kDefaultJetBackgroundBranchCut2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
690 kJetSubtractBranchesCut2 += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomConeSkip00");
691 kJetSubtractBranchesCut2 += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomCone_random");
692 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
693 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),0)));
694 kJetListSpectrum.Add(new TObjString(Form("%sRandomCone_random",taskCl->GetJetOutputBranch())));
697 if (iPWG4FastEmbedding) {
698 AliAnalysisTaskJetCluster *taskClEmb = 0;
699 taskClEmb = AddTaskJetCluster("AODextra","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // this one is for the background and random jets
700 taskClEmb->SetBackgroundCalc(kTRUE);
701 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
702 if(iAODanalysis==2)taskClEmb->SetAODTrackInput(kTRUE);
703 kDefaultJetBackgroundBranch_extra = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskClEmb->GetJetOutputBranch());
705 taskClEmb = AddTaskJetCluster("AODextraonly","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // this one is for the background and random jets
706 taskClEmb->SetBackgroundCalc(kFALSE);
707 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
708 if(iAODanalysis==2)taskClEmb->SetAODTrackInput(kTRUE);
710 taskClEmb = AddTaskJetCluster("AODextra","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow);
711 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
712 taskClEmb->SetBackgroundBranch(kDefaultJetBackgroundBranch_extra.Data());
713 kJetSubtractBranches_extra += Form("%s ",taskClEmb->GetJetOutputBranch());
714 if(iAODanalysis==2)taskClEmb->SetAODTrackInput(kTRUE);
716 taskClEmb = AddTaskJetCluster("AODextraonly","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow);
717 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
718 if(iAODanalysis==2)taskClEmb->SetAODTrackInput(kTRUE);
721 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.2,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow,0); // this one is for the background and random jets
722 taskCl->SetNRandomCones(1);
723 taskCl->SetBackgroundCalc(kTRUE);
724 taskCl->SetCentralityCut(fCenLo,fCenUp);
725 taskCl->SetJetTypes(1<<0|1<<2|1<<3);
726 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
727 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),0)));
728 kJetListSpectrum.Add(new TObjString(Form("%sRandomCone_random",taskCl->GetJetOutputBranch())));
732 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
735 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // this one is for the background jets
736 taskCl->SetBackgroundCalc(kTRUE);
737 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
738 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
739 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
741 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow);
742 taskCl->SetBackgroundCalc(kTRUE);
743 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
744 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
747 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // thid id sldo got the random cones but avoiding the two leading jets
748 taskCl->SetCentralityCut(fCenLo,fCenUp);
749 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
750 taskCl->SetNRandomCones(1);
751 if(iFilterAnalysis==2){
752 taskCl->SetJetTriggerPtCut(kJetTriggerPtCut);
754 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
756 taskCl->SetJetTypes(1<<0|1<<2); // only store the RC on full event with 2 removed
757 kDefaultJetBranch = taskCl->GetJetOutputBranch();
758 kJetSubtractBranches += Form("%s ",taskCl->GetJetOutputBranch());
759 // kJetSubtractBranches += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomConeSkip02");
760 // kJetSubtractBranches += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomCone_random");
761 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
762 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),2)));
763 // kJetListSpectrum.Add(new TObjString(Form("%sRandomCone_random",taskCl->GetJetOutputBranch())));
765 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),1.0,fTrackEtaWindow,fVertexWindow);
766 taskCl->SetNRandomCones(1);
767 taskCl->SetCentralityCut(fCenLo,fCenUp);
768 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
769 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchCut1.Data());
771 taskCl->SetJetTypes(1<<0|1<<2); // only store the RC on full event with 2 removed
772 kJetSubtractBranchesCut1 += Form("%s ",taskCl->GetJetOutputBranch());
773 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
774 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),2)));
777 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),2.0,fTrackEtaWindow,fVertexWindow);
778 taskCl->SetCentralityCut(fCenLo,fCenUp);
779 taskCl->SetNRandomCones(1);
780 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
781 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchCut2.Data());
782 taskCl->SetJetTypes(1<<0|1<<2); // only store the RC on full event with 2 removed
783 kJetSubtractBranchesCut2 += Form("%s ",taskCl->GetJetOutputBranch());
784 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
785 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),2)));
789 taskCl = AddTaskJetCluster("AOD","",1<<8,iPhysicsSelectionFlag,"ANTIKT",0.4,2,1,kDeltaAODJetName.Data(),2.0);
790 taskCl->SetCentralityCut(fCenLo,fCenUp);
791 taskCl->SetFilterMask(1<<4|1<<8,1);
793 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.2,0,1,kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow,2);
794 taskCl->SetCentralityCut(fCenLo,fCenUp);
795 taskCl->SetNRandomCones(1);
796 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
797 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
799 taskCl->SetJetTypes(1<<0|1<<2);
800 kJetSubtractBranches += Form("%s ",taskCl->GetJetOutputBranch());
801 // kJetSubtractBranches += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomConeSkip00");
802 // kJetSubtractBranches += Form("%s%s ",taskCl->GetJetOutputBranch(),"RandomCone_random");
803 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
804 kJetListSpectrum.Add(new TObjString(Form("%sRandomConeSkip%02d",taskCl->GetJetOutputBranch(),2)));
809 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // this one is for the background and random jets
810 taskCl->SetBackgroundCalc(kTRUE);
811 kDefaultJetBackgroundBranchMC = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
812 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
813 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
815 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fVertexWindow,fVertexWindow); // this one is for the background and random jets
816 taskCl->SetBackgroundCalc(kTRUE);
817 kDefaultJetBackgroundBranchMC2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
818 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
819 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
822 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // this one is for the background and random jets
823 taskCl->SetBackgroundCalc(kTRUE);
824 kDefaultJetBackgroundBranchMC = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
825 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
827 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow); // this one is for the background and random jets
828 taskCl->SetBackgroundCalc(kTRUE);
829 kDefaultJetBackgroundBranchMC2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
830 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
831 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
832 // pp background calcs...
835 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow);
836 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC.Data());
837 kDefaultJetBranchMC = taskCl->GetJetOutputBranch();
838 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
839 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
841 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15,fTrackEtaWindow,fVertexWindow);
842 if(kIsPbPb)taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC2.Data());
843 kDefaultJetBranchMC2 = taskCl->GetJetOutputBranch();
844 if(iAODanalysis==2)taskCl->SetAODTrackInput(kTRUE);
845 kJetListSpectrum.Add(new TObjString(taskCl->GetJetOutputBranch()));
849 if (!taskCl) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCluster cannot run for this train conditions - EXCLUDED");
854 if(iJETSUBTRACT&&kJetSubtractBranches.Length()){
855 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJetBackgroundSubtract.C");
856 AliAnalysisTaskJetBackgroundSubtract *taskSubtract = 0;
857 if(kJetSubtractBranches.Length()){
862 for(int iB = 1;iB<3;iB++){
864 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches,iB,kJetSubtractMask1.Data(),kJetSubtractMask2.Data());
865 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data()); taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
866 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
867 taskSubtract->SetKeepJets(kTRUE);
869 TObjArray *objArr = kJetSubtractBranches.Tokenize(" ");
870 for(int iJB = 0;iJB<objArr->GetEntries();iJB++){
871 TObjString *ostr = (TObjString*)objArr->At(iJB);
872 cTmp = ostr->GetString().Data();
873 cTmp.ReplaceAll(kJetSubtractMask1.Data(),Form(kJetSubtractMask2.Data(),iB));
874 kJetListSpectrum.Add(new TObjString(cTmp.Data()));
877 // taskSubtract->SetDebugLevel(3);
879 if(kJetSubtractBranches.Contains(kDefaultJetBranch.Data())&&kIsPbPb){
880 kDefaultJetBranch.ReplaceAll(taskSubtract->GetToReplace(),Form(taskSubtract->GetReplacementMask(),taskSubtract->GetSubtractionMethod()));
889 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranchesCut1,iB,kJetSubtractMask1.Data(),kJetSubtractMask2.Data(),"Cut1000");
890 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranchCut1.Data());
891 taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
892 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
894 objArr = kJetSubtractBranchesCut1.Tokenize(" ");
895 for(int iJB = 0;iJB<objArr->GetEntries();iJB++){
896 TObjString *ostr = (TObjString*)objArr->At(iJB);
897 cTmp = ostr->GetString().Data();
898 cTmp.ReplaceAll(kJetSubtractMask1.Data(),Form(kJetSubtractMask2.Data(),iB));
899 kJetListSpectrum.Add(new TObjString(cTmp.Data()));
902 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranchesCut2,iB,kJetSubtractMask1.Data(),kJetSubtractMask2.Data(),"Cut2000");
903 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranchCut2.Data());
904 taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
905 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
907 objArr = kJetSubtractBranchesCut2.Tokenize(" ");
908 for(int iJB = 0;iJB<objArr->GetEntries();iJB++){
909 TObjString *ostr = (TObjString*)objArr->At(iJB);
910 cTmp = ostr->GetString().Data();
911 cTmp.ReplaceAll(kJetSubtractMask1.Data(),Form(kJetSubtractMask2.Data(),iB));
912 kJetListSpectrum.Add(new TObjString(cTmp.Data()));
916 if(kJetSubtractBranches_extra.Length()){
917 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches_extra,2,kJetSubtractMask1.Data(),kJetSubtractMask2.Data(),"extra");
918 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch_extra.Data());
919 taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
920 //taskSubtract->SetDebugLevel(3);
921 if(kDeltaAODJetName.Length()>0)taskSubtract->SetNonStdOutputFile(kDeltaAODJetName.Data());
922 if(kJetSubtractBranches_extra.Contains(kDefaultJetBranch.Data())){
923 kDefaultJetBranch.ReplaceAll(taskSubtract->GetToReplace(),Form(taskSubtract->GetReplacementMask(),taskSubtract->GetSubtractionMethod()));
926 if (!taskSubtract) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetBackgroundSubtrac cannot run for this train conditions - EXCLUDED");
930 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskDiJets.C");
931 AliAnalysisTaskDiJets *taskdijets = 0;
932 if(iDIJETAN&1)taskdijets = AddTaskDiJets();
933 if (!taskdijets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
935 taskdijets = AddTaskDiJets("jetsAOD_CDF07");
936 taskdijets = AddTaskDiJets("jetsAOD_DA07");
937 taskdijets = AddTaskDiJets("jetsAOD_FASTJET07");
938 taskdijets = AddTaskDiJets("jetsAOD_FASTKT07");
939 taskdijets = AddTaskDiJets("jetsAOD_SISCONE07");
940 taskdijets = AddTaskDiJets("jetsAOD_UA107");
945 gROOT->LoadMacro("$ALICE_ROOT/PWGPP/PilotTrain/AddTaskQAsym.C");
946 AliAnalysisTaskQASym *taskQASym = AddTaskQAsym(-1);
947 if (!taskQASym) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQASym cannot run for this train conditions - EXCLUDED");
952 if(iPWG4TmpSourceSara){
953 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskEta.C");
954 AliAnalysisTaskEta *taskEta = AddTaskEta();
955 if (!taskEta) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskEta cannot run for this train conditions - EXCLUDED");
959 if(iPWG4JetServices){
960 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJetServices.C");
961 AliAnalysisTaskJetServices *taskjetServ = 0;
962 taskjetServ = AddTaskJetServices();
963 if (!taskjetServ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetServices cannot run for this train conditions - EXCLUDED");
964 if(kGridRunRange[0]>0)taskjetServ->SetRunRange(kGridRunRange[0],kGridRunRange[1]);
965 else taskjetServ->SetRunRange(110000,160000);
966 taskjetServ->SetMCData(kIsMC);
967 taskjetServ->SetUsePhysicsSelection((Bool_t)iPhysicsSelection);
968 taskjetServ->SetPhysicsSelectionFlag(iPhysicsSelectionFlag); //
969 taskjetServ->SetNonStdFile(kDeltaAODJetName.Data());
970 taskjetServ->SetTrackEtaWindow(fTrackEtaWindow);
971 taskjetServ->SetZVertexCut(fVertexWindow);
972 taskjetServ->SetFilterMask(kHighPtFilterMask);
974 taskjetServ->SetDebugLevel(10);
977 if(kIsPbPb)taskjetServ->SetCollisionType(AliAnalysisTaskJetServices::kPbPb);
978 else taskjetServ->SetCollisionType(AliAnalysisTaskJetServices::kPP);
980 if(kDeltaAODJetName.Length()>0&&kFilterAOD)taskjetServ->SetFilterAODCollisions(kTRUE);
981 // else if(iAODanalysis)taskjetServ->SetFilterAODCollisions(kTRUE);
985 taskjetServ->SetAODInput(kTRUE);
989 if(iPWG4JetSpectrum){
990 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJetSpectrum2.C");
991 AliAnalysisTaskJetSpectrum2 *taskjetSpectrum = 0;
992 TString bkgClusters = kDefaultJetBackgroundBranch.Data();
993 bkgClusters.ReplaceAll(Form("%s_",AliAODJetEventBackground::StdBranchName()),"");
994 Printf("############# Possible jet branches ###################");
995 for(int iJF = 0;iJF < kJetListSpectrum.GetSize();iJF++){
996 TObjString *objStr = (TObjString*)kJetListSpectrum.At(iJF);
997 Printf("%3d: %s",iJF+1,objStr->GetString().Data());
1000 // Printf("Type q to exit");if(getchar()=='q')return;
1001 if(iPWG4JetSpectrum&1){
1003 for(int iJF = 0;iJF < kJetListSpectrum.GetSize();iJF++){
1004 Long64_t value = kJetMapSpectrum(iJF+1);
1005 Printf("iJF: %d value: %d", iJF+1,(Int_t)value);
1006 if(value==0)continue;
1007 TObjString *objStr = (TObjString*)kJetListSpectrum.At(iJF);
1008 TString bName1 = objStr->GetString().Data();
1011 TObjString *objStrBkg = (TObjString*)kJetListSpectrum.At(iJF);
1012 TString bBkgName1("");
1013 TString bBkgName2[3];
1015 Long64_t valueBkg1 = kJetBackMapSpectrum(iJF+1);
1017 TObjString *objStrBkg = (TObjString*)kJetListSpectrum.At(valueBkg1-1);
1018 bBkgName1 = objStrBkg->GetString().Data();
1023 for(int i = 0;i<3;i++){
1024 iJF2 = value/kJetMapOffset[i]-1;
1025 value = value%kJetMapOffset[i];
1026 Printf("%d %d", iJF2+1,(Int_t)value);
1027 if(iJF2>=0&&iJF2<kJetListSpectrum.GetSize()){
1028 TObjString *objStr2 = (TObjString*)kJetListSpectrum.At(iJF2);
1029 bName2[iPartner] = objStr2->GetString().Data();
1030 Long64_t valueBkg2 = kJetBackMapSpectrum(iJF2+1);
1032 TObjString *objStrBkg2 = (TObjString*)kJetListSpectrum.At(valueBkg2-1);
1033 bBkgName2[iPartner] = objStrBkg2->GetString().Data();
1041 // loop over all centralities
1042 for(int ic = 0;ic<5;ic++){
1044 Bool_t bDone = kFALSE;
1045 for(int i = 0;i<TMath::Max(iPartner,1);i++){
1046 if(bName2[i].Length()){
1047 taskjetSpectrum = AddTaskJetSpectrum2(bName1.Data(),bName2[i].Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,ic);
1052 taskjetSpectrum = AddTaskJetSpectrum2(bName1.Data(),bName2[i].Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,ic);
1059 Printf("%s/%s %s/%s",bName1.Data(),bBkgName1.Data(),bName2[i].Data(),bBkgName2[i].Data());
1061 // setting all the other things...
1062 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
1063 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
1065 // negative values do not fill the track histos
1066 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetGenFull,-1);
1067 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetGen,-1);
1068 if(!bName1.Contains("ANTIKT")||bName1.Contains("Cone")){
1069 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetRecFull,-1);
1070 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetRec,-1);
1074 if(bName2[i].Length()==0){
1075 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetGenFull,0);
1076 taskjetSpectrum->SetFlagJetType(AliAnalysisTaskJetSpectrum2::kJetGen,0);
1078 if(iAODanalysis==1){
1079 taskjetSpectrum->SetAODJetInput(kTRUE);
1080 taskjetSpectrum->SetAODTrackInput(kTRUE);
1082 else if (iAODanalysis==2){
1083 taskjetSpectrum->SetAODTrackInput(kTRUE);
1084 taskjetSpectrum->SetAODJetInput(kFALSE);
1086 // taskjetSpectrum->SetDebugLevel(11);
1087 taskjetSpectrum->SetBranchBkgRec(bBkgName1.Data());
1088 taskjetSpectrum->SetBranchBkgGen(bBkgName2[i].Data());
1096 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),
1097 "",kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
1101 if(kDefaultJetBranchMC.Length()){
1102 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),
1103 kDefaultJetBranchMC.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
1104 // taskjetSpectrum->SetMinJetPt(10);
1105 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
1106 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
1107 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
1108 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
1109 if(iAODanalysis)SetAODInput(taskjetSpectrum);
1111 if(kDefaultJetBranchMC2.Length()){
1112 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),
1113 kDefaultJetBranchMC2.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
1114 // taskjetSpectrum->SetMinJetPt(10);
1115 taskjetSpectrum->SetTrackEtaWindow(fTrackEtaWindow);
1116 taskjetSpectrum->SetJetEtaWindow(fJetEtaWindow);
1117 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
1118 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
1119 if(iAODanalysis)SetAODInput(taskjetSpectrum);
1123 TString tmp2(kDefaultJetBranch.Data());
1124 tmp2.ReplaceAll(Form(kJetSubtractMask2.Data(),0),Form(kJetSubtractMask2.Data(),2));
1125 taskjetSpectrum = AddTaskJetSpectrum2(tmp2.Data(),kDefaultJetBranch.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
1126 // taskjetSpectrum->SetDebugLevel(3);
1127 // taskjetSpectrum->SetMinJetPt(10);
1128 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
1129 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
1130 taskjetSpectrum->SetTrackEtaWindow(0.8);
1131 taskjetSpectrum->SetJetEtaWindow(0.4);
1133 // check the old subtracted vs. the new subtracted
1134 TString tmp3(kDefaultJetBranch.Data());
1135 tmp3.ReplaceAll(Form(kJetSubtractMask2.Data(),0),Form(kJetSubtractMask2.Data(),3));
1136 taskjetSpectrum = AddTaskJetSpectrum2(tmp3.Data(),kDefaultJetBranch.Data(),kDeltaAODJetName.Data(),kHighPtFilterMask,AliVEvent::kMB,0,i);
1137 // taskjetSpectrum->SetDebugLevel(3);
1138 // taskjetSpectrum->SetMinJetPt(10);
1139 taskjetSpectrum->SetBranchBkgRec(bkgClusters.Data());
1140 taskjetSpectrum->SetBranchBkgGen(bkgClusters.Data());
1141 taskjetSpectrum->SetTrackEtaWindow(0.8);
1142 taskjetSpectrum->SetJetEtaWindow(0.4);
1143 if(iAODanalysis)SetAODInput(taskjetSpectrum);
1146 if (!taskjetSpectrum) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetSpectrum2 cannot run for this train conditions - EXCLUDED");
1149 AliAnalysisManager::SetCommonFileName("PWG4_Fragmentation.root");
1150 if(iPWG4Fragmentation){
1151 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskFragmentationFunction.C");
1152 AliAnalysisTaskFragmentationFunction *taskFrag = 0;
1159 for(int ic = 1;ic < 5;ic++){
1161 taskFrag = AddTaskFragmentationFunction(1<<23,kHighPtFilterMask, ic);
1162 if(kDeltaAODJetName.Length()>0)taskFrag->SetNonStdFile(kDeltaAODJetName.Data());
1163 if(iAODanalysis==2)taskFrag->UseAODInputJets(kFALSE);
1166 taskFrag = AddTaskFragmentationFunction(1<<0,kHighPtFilterMask, ic);
1167 if(kDeltaAODJetName.Length()>0)taskFrag->SetNonStdFile(kDeltaAODJetName.Data());
1168 if(iAODanalysis==2)taskFrag->UseAODInputJets(kFALSE);
1173 taskFrag = AddTaskFragmentationFunction(1<<28,kHighPtFilterMask, ic);
1174 taskFrag = AddTaskFragmentationFunction(1<<29,kHighPtFilterMask, ic);
1175 taskFrag = AddTaskFragmentationFunction(1<<30,kHighPtFilterMask, ic);
1181 if(!iAODanalysis==1){
1182 taskFrag = AddTaskFragmentationFunction(1<<26,kHighPtFilterMask, ic);
1183 if(kDeltaAODJetName.Length()>0)taskFrag->SetNonStdFile(kDeltaAODJetName.Data());
1184 if(iAODanalysis==2)taskFrag->UseAODInputJets(kFALSE);
1186 taskFrag = AddTaskFragmentationFunction(1<<27,kHighPtFilterMask, ic);
1187 if(kDeltaAODJetName.Length()>0)taskFrag->SetNonStdFile(kDeltaAODJetName.Data());
1188 if(iAODanalysis==2)taskFrag->UseAODInputJets(kFALSE);
1196 if (!taskFrag) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskFragmentationFunction cannot run for this train conditions - EXCLUDED");
1200 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJetChem.C");
1201 AliAnalysisTask *taskChem = AddTaskJetChem(kHighPtFilterMask);
1202 if (!taskChem) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetChem cannot run for this train conditions - EXCLUDED");
1205 if (iPWG4JetResponse) {
1206 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJetResponse.C");
1207 AliAnalysisTask *taskJetResponse = 0;
1210 taskJetResponse = AddTaskJetResponse("jets", "FASTJET", 0.4, kHighPtFilterMask, 0.15, 0);
1211 taskJetResponse = AddTaskJetResponse("jets", "FASTJET", 0.4, kHighPtFilterMask, 0.15, 1);
1213 taskJetResponse = AddTaskJetResponse("jets", "UA1", 0.4, kHighPtFilterMask, 1., 0);
1214 taskJetResponse = AddTaskJetResponse("jets", "UA1", 0.4, kHighPtFilterMask, 1., 2);
1217 taskJetResponse = AddTaskJetResponse("clusters", "ANTIKT", 0.4, kHighPtFilterMask, 0.15, 0);
1218 taskJetResponse = AddTaskJetResponse("clusters", "ANTIKT", 0.4, kHighPtFilterMask, 0.15, 1);
1220 if (!taskJetResponse) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetResponse cannot run for this train conditions - EXCLUDED");
1225 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskJCORRANTask.C");
1226 AliJCORRANTask* corran = AddTaskJCORRAN(kDeltaAODJCORRANName.Data(),0);
1227 if(!corran)::Warning("AnalysisTrainPWG4Jets", "AliJCORRANTask cannot run for this train conditions - EXCLUDED");
1229 if(kDeltaAODJCORRANName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJCORRANName.Data());
1234 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskUE.C");
1235 AliAnalysisTaskUE *taskUE = 0;
1236 if(iPWG4UE&1)taskUE = AddTaskUE();
1238 taskUE =AddTaskUE("jetsAOD_CDF04","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
1239 // taskUE =AddTaskUE("jetsAOD_CDF07","CDF", "LJ", "TRANSV","MSP");
1240 taskUE =AddTaskUE("jetsAOD_SISCONE04","CDF", "LJ", "TRANSV","MSP");
1241 // taskUE =AddTaskUE("jetsAOD_SISCONE07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
1242 taskUE =AddTaskUE("jetsAOD_ICDF","CDF","LJ","TRANSV","MSP");
1243 taskUE =AddTaskUE("jetsAOD_FASTKT04","CDF", "LJ", "TRANSV","MSP");
1244 // taskUE =AddTaskUE("jetsAOD_FASTKT07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
1245 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta05", "TRANSV","MSP");
1246 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta09", "TRANSV","MSP");
1249 if (!taskUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskUE cannot run for this train conditions - EXCLUDED");
1253 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskLeadingTrackUE.C");
1254 AliAnalysisTaskLeadingTrackUE *taskLeadingUE = AddTaskLeadingTrackUE(kUseMC);
1255 if (!taskLeadingUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTasLeadingTrackkUE cannot run for this train conditions - EXCLUDED");
1256 // taskLeadingUE->SetFilterBit(64);
1260 if(iPWG4CorrectionsUE){
1261 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskCorrectionsUE.C");
1262 AliAnalysisTaskCorrectionsUE *taskCorrectionsUE = 0;
1263 if(iPWG4CorrectionsUE&1)taskCorrectionsUE = AddTaskCorrectionsUE("jetsAOD_NONE","CDF","MP_eta05","TRANSV","MSP",kFALSE);
1264 if (!taskCorrectionsUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCorrectionsUE cannot run for this train conditions - EXCLUDED");
1268 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskThreeJets.C");
1269 AliAnalysisTaskThreeJets *taskThree = AddTaskThreeJets();
1270 if(!taskThree)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskThreets cannot run for this train conditions - EXCLUDED");
1273 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskQGSep.C");
1274 AliAnalysisTaskQGSep *taskQGSep = AddTaskQGSep(kUseMC,iAODanalysis);
1275 if(!taskQGSep)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQGSep cannot run for this train conditions - EXCLUDED");
1280 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskMinijet.C");
1281 AliAnalysisTaskMinijet *taskMini = AddTaskMinijet(-1,"esd",kUseMC,kGridDataSet);
1282 // if we ha highmult trigger add another task
1283 if(!taskMini)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskMinjet cannot run for this train conditions - EXCLUDED");
1286 AliAnalysisManager::SetCommonFileName("PWG4_HighPtQA.root");
1288 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskPWG4HighPtQAMC.C");
1289 AliPWG4HighPtQAMC *taskQAMC = 0;
1292 taskQAMC = AddTaskPWG4HighPtQAMCAll(kGridDataSet.Data());
1295 if (!taskQAMC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQAMC cannot run for this train conditions - EXCLUDED");
1299 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskPWG4HighPtTrackQA.C");
1300 if(iPWG4PtTrackQA&2)AddTaskPWG4HighPtTrackQAAll(kGridDataSet.Data(),kIsPbPb,iAODanalysis);
1301 else AddTaskPWG4HighPtTrackQAAllReduced(kGridDataSet.Data(),kIsPbPb,iAODanalysis);
1305 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskPWG4HighPtQATPConly.C");
1306 AliPWG4HighPtQATPConly *taskQATPC = 0;
1307 if(iPWG4PtQATPC&1)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),1);
1308 if(iPWG4PtQATPC&2)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),2);
1310 if (!taskQATPC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQATPC cannot run for this train conditions - EXCLUDED");
1314 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskPWG4CosmicCandidates.C");
1316 AliPWG4CosmicCandidates *taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(0);
1317 taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(1);
1319 if (!taskPWG4CosmicCandidates) ::Warning("AnalysisTrainPWG4Jets", "AddTaskPWG4CosmicCandidates cannot run for this train conditions - EXCLUDED");
1324 gROOT->LoadMacro("$ALICE_ROOT/PWGJE/macros/AddTaskPWG4HighPtSpectra.C");
1325 AddTaskPWG4HighPtSpectraAll(kGridDataSet.Data(),kIsPbPb,iAODanalysis);
1328 //==========================================================================
1329 // FOR THE REST OF THE TASKS THE MACRO AddTaskXXX() is not yet implemented/
1333 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1334 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1337 if (mgr->InitAnalysis()) {
1339 // if (kSaveTrain || strlen(config_file)) gSystem->ChangeDirectory(kTrainName);
1340 if (!strcmp(plugin_mode,"submit")&&smode=="GRID"){
1341 TString alien_workdir = gGrid->GetHomeDirectory();
1342 if (iAODanalysis) alien_workdir += "analysisAOD";
1343 else alien_workdir += "analysisESD";
1344 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s%s",kGridDataSet.Data(),kGridExtraAliendirLevel.Data());
1345 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1346 printf("=== AnalysisTrainPWG4Jets:: Registering jdl in the work directory alien://%s/%s, should be done by the manager! ===\n",
1347 alien_workdir.Data(),gridhandler->GetGridOutputDir());
1350 dest = Form("%s/%s/%s.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1351 if(AliAnalysisAlien::FileExists(dest.Data())){
1352 Printf("%s exist on grid removing...",dest.Data());
1353 gGrid->Rm(dest.Data());
1355 Printf("%s copy ...",dest.Data());
1356 TFile::Cp(Form("file:%s.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
1360 dest = Form("%s/%s/%s_merge.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1361 if(AliAnalysisAlien::FileExists(dest.Data())){
1362 Printf("%s exist on grid removing...",dest.Data());
1363 gGrid->Rm(dest.Data());
1365 Printf("%s copy ...",dest.Data());
1366 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
1368 dest = Form("%s/%s/%s_merge_final.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
1369 if(AliAnalysisAlien::FileExists(dest.Data())){
1370 Printf("%s exist on grid removing...",dest.Data());
1371 gGrid->Rm(dest.Data());
1373 Printf("%s copy ...",dest.Data());
1374 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
1376 AliLog::SetGlobalLogLevel(AliLog::kError);
1377 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
1378 TFile * fM = TFile::Open("manager_local.root","RECREATE");
1383 // grmpf, aliroot error handler overwrites root
1384 gErrorIgnoreLevel = kErrorIgnoreLevel;
1385 if(gErrorIgnoreLevel>3000) AliLog::SetGlobalLogLevel(AliLog::kFatal);
1386 StartAnalysis(smode, chain);
1387 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
1388 for(int i = 0;i < mgr->GetTopTasks()->GetEntries();i++){
1389 mgr->ProfileTask(i);
1392 if (!strcmp(plugin_mode, "offline")&&smode=="GRID"){
1393 // Offline mode path files
1395 // PatchAnalysisMacro();
1398 if (kSaveTrain && smode=="GRID") {
1399 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1400 TString alien_workdir = gGrid->GetHomeDirectory();
1401 if (iAODanalysis) alien_workdir += "analysisAOD";
1402 else alien_workdir += "analysisESD";
1403 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s%s",kGridDataSet.Data(),kGridExtraAliendirLevel.Data());
1404 // kGridOutdir = gridhandler->GetGridOutputDir();
1405 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
1406 alien_workdir.Data());
1407 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data())))
1408 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
1409 if (strcmp(plugin_mode, "test"))
1410 TFile::Cp(Form("file:%sConfig.C",kTrainName.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
1415 //______________________________________________________________________________
1416 void StartAnalysis(const char *mode, TChain *chain) {
1419 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1420 if (!strcmp(mode, "LOCAL")) imode = 0;
1421 if (!strcmp(mode, "PROOF")) imode = 1;
1422 if (!strcmp(mode, "GRID")) imode = 2;
1426 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1429 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
1432 if (!kProofDataSet.Length()) {
1433 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "kProofDataSet is empty");
1436 mgr->StartAnalysis(mode, kProofDataSet, kProofEvents,kProofOffset);
1440 if (!mgr->GetGridHandler()) {
1441 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Grid plugin not initialized");
1444 mgr->StartAnalysis("grid",chain,kNumberOfEvents);
1447 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1450 // mgr->StartAnalysis(mode, chain);
1451 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
1457 //______________________________________________________________________________
1458 void CheckModuleFlags(const char *mode) {
1459 // Checks selected modules and insure compatibility
1461 if (!strcmp(mode, "LOCAL")) imode = 0;
1462 if (!strcmp(mode, "PROOF")) imode = 1;
1463 if (!strcmp(mode, "GRID")) imode = 2;
1467 kPluginAliRootVersion = ""; // NO aliroot if we use CPAR
1472 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
1477 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
1478 kPluginUse = kFALSE;
1483 // switch off anthin related to MC
1489 // Decide if we have PbPb
1490 if(kGridDataSet.CompareTo("LHC10h")==0||kGridDataSet.Contains("LHC10h")||kGridDataSet.CompareTo("LHC11h")==0||kGridDataSet.Contains("LHC11h")) {
1491 Printf("Using settings for Pb+Pb");
1500 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
1502 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
1505 kUseAODTags = kFALSE;
1507 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
1509 if (iPhysicsSelection)
1510 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "Physics Selection disabled in analysis on AOD's");
1511 iPhysicsSelection = 0;
1513 if (iJETAN || iJETANReader || iJETANFinder)
1514 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
1520 // Disable tasks that do not work yet on AOD data
1521 if(iPWG4JCORRAN)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 JCORRAN disabled in analysis on AOD's");
1523 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
1525 if( iPWG4PtQATPC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtTPC disabled in analysis on AOD's");
1527 if( iPWG4Cosmics)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Comics disabled in analysis on AOD's");
1530 if(iPWG4KMeans)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4KMeans disabled on AOD's");
1532 if (iPWG4JetCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4Jetcorr disabled on AOD's");
1534 if (iPWG4PartCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
1536 if (iPWG4CaloQA)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4CaloQA disabled on AOD's");
1538 if (iPWG4Tagged)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4tagged disabled on AOD's");
1541 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
1543 if(iPWGPPQASym)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWGPP QA Sym disabled in analysis on AOD's");
1544 if (iPWG4GammaConv)::Info("AnalysisPWG4Jets.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's");
1547 iCentralitySelection = 0;
1552 iCentralitySelection = 1;
1558 if(kUseKinefilter)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Kine Filter disabled in analysis without MC");
1559 kUseKinefilter = kFALSE;
1560 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis without MC");
1562 if( iPWG4CorrectionsUE)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 CorrectionsUE disabled in analysis without MC");
1563 iPWG4CorrectionsUE = 0;
1566 kUseKinefilter = kFALSE;
1567 kUseMuonfilter = kFALSE;
1569 if(!iJETAN ||iJETANReader || iJETANFinder){
1570 iPWG4JetSpectrum = iPWG4UE = iPWG4CorrectionsUE = iPWG4ThreeJets = iPWG4QGSep = iDIJETAN = 0;
1573 iPWG4JetTasks = iPWG4JetServices||iPWG4JetSpectrum||iPWG4UE||iPWG4LeadingUE||iPWG4PtQAMC||iPWG4PtTrackQA||iPWG4PtSpectra||iPWG4PtQATPC||iPWG4Cosmics||iPWG4ThreeJets||iPWG4QGSep||iPWG4JetChem||iPWG4Minijet||iPWG4Fragmentation;
1574 iPWG4PartCorrLibs = iPWG4PartCorr||iPWG4Tagged||iPWG4CaloQA;
1575 iPWG4GammaConvLib = iPWG4GammaConv||iPWG4CaloConv;
1578 iEMCUtilLibs = iPWG4JetTasks||iPWG4PartCorrLibs||iPWG4JCORRAN||iPWG4GammaConvLib||iJETAN||iJETANReader||iJETANFinder;
1579 iJETANLib = (iPWG4JetTasks||iJETAN||iDIJETAN) && !(iJETANReader||iJETANFinder) ;
1580 iJETANdevLib = (iPWG4JetTasks||iJETANReader||iJETANFinder||iDIJETAN) && !iJETAN ;
1582 if (iESDfilter) {iAODhandler=1;}
1583 if (kUseKinefilter && !kUseMC) kUseKinefilter = kFALSE;
1584 if (kUseAODTags && !iAODhandler) kUseAODTags = kFALSE;
1590 //______________________________________________________________________________
1591 Bool_t Connect(const char *mode) {
1592 // Connect <username> to the back-end system.
1594 if (!strcmp(mode, "LOCAL")) imode = 0;
1595 if (!strcmp(mode, "PROOF")) imode = 1;
1596 if (!strcmp(mode, "GRID")) imode = 2;
1597 TString username = gSystem->Getenv("alien_API_USER");
1602 if (!username.Length()) {
1603 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1604 1. Have called: alien-token-init <username>\n \
1605 2. Have called: >source /tmp/gclient_env_$UID");
1608 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
1609 username.Data(), kProofCluster.Data());
1610 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
1611 // TProof::Open(Form("%s@%s:31093", username.Data(), kProofCluster.Data()));
1612 TProof::Open(Form("%s@%s", username.Data(), kProofCluster.Data()));
1614 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
1615 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
1618 if(kProofClearPackages)gProof->ClearPackages();
1620 if(kProofSaveToAlien){
1621 TGrid::Connect("alien://");
1623 TString homedir = gGrid->GetHomeDirectory();
1624 TString workdir = homedir + kTrainName;
1625 if (!gGrid->Cd(workdir)) {
1627 if (gGrid->Mkdir(workdir)) {
1628 gGrid->Cd(kTrainName);
1629 ::Info("AnalysisTrainPWG4Jets::Connect()", "Directory %s created", gGrid->Pwd());
1632 gGrid->Mkdir("proof_output");
1633 gGrid->Cd("proof_output");
1634 kProofOutdir = Form("alien://%s", gGrid->Pwd());
1639 if (!username.Length()) {
1640 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1641 1. Have called: alien-token-init <username>\n \
1642 2. Have called: >source /tmp/gclient_env_$UID");
1645 if (kPluginUse && !gSystem->Getenv("alien_CLOSE_SE")) {
1646 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode),
1647 "When using the AliEn plugin it is preferable to define the \
1648 variable alien_CLOSE_SE in your environment.");
1651 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to AliEn ...",
1653 TGrid::Connect("alien://");
1654 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
1657 ::Error("AnalysisTrainPWG4Jets.C::Connect", "Unknown run mode: %s", mode);
1660 ::Info("AnalysisTrainPWG4Jets.C::Connect","Connected in %s mode", mode);
1664 //______________________________________________________________________________
1665 Bool_t LoadCommonLibraries(const char *mode)
1667 if (!gSystem->Getenv("ALICE_ROOT")) {
1668 ::Error("AnalysisTrainPWG4Jets.C", "Analysis train requires that ALICE_ROOT is set to pick up Configurations");
1672 // Load common analysis libraries.
1674 if (!strcmp(mode, "LOCAL")) imode = 0;
1675 if (!strcmp(mode, "PROOF")) imode = 1;
1676 if (!strcmp(mode, "GRID")) imode = 2;
1677 Bool_t success = kTRUE;
1679 gSystem->Load("libTree.so");
1680 gSystem->Load("libGeom.so");
1681 gSystem->Load("libVMC.so");
1682 gSystem->Load("libPhysics.so");
1683 gSystem->Load("libMinuit.so");
1685 // Load framework classes. Par option ignored here.
1690 success &= LoadLibrary("STEERBase", mode, kTRUE);
1691 success &= LoadLibrary("ESD", mode, kTRUE);
1692 success &= LoadLibrary("AOD", mode, kTRUE);
1693 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
1694 success &= LoadLibrary("OADB", mode, kTRUE);
1695 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
1696 success &= LoadLibrary("ROOTFILES", mode, kTRUE);
1697 // success &= LoadLibrary("EventMixing", mode,kTRUE);
1698 success &= LoadLibrary("CORRFW", mode, kTRUE);
1700 success &= LoadLibrary("libSTEERBase.so", mode);
1701 success &= LoadLibrary("libESD.so", mode);
1702 success &= LoadLibrary("libAOD.so", mode);
1703 success &= LoadLibrary("libANALYSIS.so", mode);
1704 success &= LoadLibrary("libOADB.so", mode, kTRUE);
1705 success &= LoadLibrary("libANALYSISalice.so", mode);
1706 // success &= LoadLibrary("libEventMixing.so", mode);
1707 success &= LoadLibrary("libCORRFW.so", mode);
1708 gROOT->ProcessLine(".include $ALICE_ROOT/include");
1713 if (kProofUseAFPAR && !gSystem->AccessPathName(kProofAFversion)) ires = gProof->UploadPackage(kProofAFversion);
1715 success &= LoadLibrary("STEERBase", mode);
1716 success &= LoadLibrary("ESD", mode);
1717 success &= LoadLibrary("AOD", mode);
1718 success &= LoadLibrary("ANALYSIS", mode);
1719 success &= LoadLibrary("ANALYSISalice", mode);
1720 success &= LoadLibrary("EventMixing", mode);
1721 success &= LoadLibrary("CORRFW", mode);
1723 ires = gProof->EnablePackage(kProofAFversion);
1724 if (ires<0) success = kFALSE;
1725 success &= LoadLibrary("CORRFW", mode);
1729 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
1733 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
1734 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
1735 gSystem->GetIncludePath());
1737 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: FAILED");
1743 //______________________________________________________________________________
1744 Bool_t LoadAnalysisLibraries(const char *mode)
1746 // Load common analysis libraries.
1747 Bool_t success = kTRUE;
1749 if (!LoadLibrary("TENDER", mode, kTRUE) ||
1750 !LoadLibrary("TENDERSupplies", mode, kTRUE)) return kFALSE;
1754 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
1755 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
1760 // this part needs some rework in case we do not need the fastjed finders for processing
1762 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
1763 !LoadLibrary("PHOSUtils", mode, kTRUE)) return kFALSE;
1765 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
1766 if (!strcmp(mode, "PROOF")){
1767 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libCGAL.so\"\)", kTRUE);
1768 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libfastjet.so\"\)", kTRUE);
1769 // problem when loading siscone copiled with different gcc version??
1770 // gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libsiscone.so\"\)", kTRUE);
1771 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libSISConePlugin.so\"\)", kTRUE);
1774 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
1775 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
1776 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
1777 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
1780 // par files plus FASTJET needs some extra work... need to change
1781 // the loading sequence in the auto generated .C file
1782 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
1783 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
1784 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
1785 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
1787 if (!LoadLibrary("FASTJETAN", mode, kTRUE)) return kFALSE;
1792 // this part needs some rework in case we do not need the fastjed finders for processing
1794 if (!LoadLibrary("EMCALUtils", mode, kTRUE) &&
1795 !LoadLibrary("PHOSUtils", mode, kTRUE)) return kFALSE;
1797 if (!LoadLibrary("JETANdev", mode, kTRUE)) return kFALSE;
1798 if (!strcmp(mode, "PROOF")){
1799 if (!LoadLibrary("FASTJET", mode, kTRUE)) return kFALSE;
1802 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
1803 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
1804 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
1805 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
1808 // par files plus FASTJET needs some extra work... need to change
1809 // the loading sequence in the auto generated .C file
1810 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
1811 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
1812 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
1813 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
1815 if (!LoadLibrary("FASTJETANdev", mode, kTRUE)) return kFALSE;
1819 if (!LoadLibrary("PWGTools", mode, kTRUE)) return kFALSE;
1820 if (!LoadLibrary("PWGJE", mode, kTRUE)) return kFALSE;
1824 if (!LoadSource(Form("%s/PWGPP/AliAnalysisTaskQASym.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1826 if(iPWG4TmpSourceSara){
1827 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
1828 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskEta.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1831 if (iPWG4PartCorrLibs) {
1832 if (!LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
1833 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
1836 // PWG4 particle correlations
1837 if(!LoadLibrary("PWG4JCORRAN",mode,kTRUE))return kFALSE;
1840 if (!LoadLibrary("PWG4JetCorrel", mode, kTRUE)) return kFALSE;
1842 if (iPWG4omega3pi) {
1843 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
1845 if (iPWG4GammaConvLib) {
1846 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
1849 ::Info("AnalysisTrainPWG4Jets.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
1853 //______________________________________________________________________________
1854 Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
1856 // Load a module library in a given mode. Reports success.
1859 TString smodule(module);
1860 if (!strcmp(mode, "LOCAL")) imode = 0;
1861 if (!strcmp(mode, "PROOF")) imode = 1;
1862 if (!strcmp(mode, "GRID")) imode = 2;
1863 TString mod(module);
1864 if (!mod.Length()) {
1865 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Empty module name");
1868 // If a library is specified, just load it
1869 if (smodule.EndsWith(".so")) {
1870 mod.Remove(mod.Index(".so"));
1871 result = gSystem->Load(mod);
1873 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load library %s", module);
1876 if (rec) anaLibs += Form("%s.so ",mod.Data());
1877 if (rec) anaLibsExtra += Form("%s.so ",mod.Data());
1880 // Check if the library is already loaded
1881 if (strlen(gSystem->GetLibraries(Form("%s.so", module), "", kFALSE)) > 0)
1887 result = SetupPar(module);
1888 if (rec) anaPars += Form("%s.par ", module);
1890 result = gSystem->Load(Form("lib%s.so", module));
1891 if (rec) anaLibs += Form("lib%s.so ", module);
1895 if(!gSystem->AccessPathName(module)){
1896 ::Info("AnalysisTrainPWG4Jets.C::LoadLibrary", "Removing directory %s",module);
1897 gSystem->Exec(Form("rm -rf %s",module));
1899 result = gProof->UploadPackage(module);
1901 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
1903 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
1907 result = gProof->EnablePackage(module);
1913 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load module %s", module);
1921 //______________________________________________________________________________
1922 Bool_t LoadSource(const char *source, const char *mode, Bool_t rec=kFALSE)
1924 // Load a module library in a given mode. Reports success.
1927 if (!strcmp(mode, "LOCAL")) imode = 0;
1928 if (!strcmp(mode, "PROOF")) imode = 1;
1929 if (!strcmp(mode, "GRID")) imode = 2;
1930 TString ssource(source);
1931 TString basename = gSystem->BaseName(ssource.Data());
1932 if (!ssource.Length()) {
1933 ::Error("AnalysisTrainPWG4Jets.C::LoadSource", "Empty task name");
1936 // we have a source code so compile it
1937 if (ssource.EndsWith(".cxx")) {
1938 // need to copy it here other wise the path is also used on grid...
1939 ssource.Remove(ssource.Index(".cxx"));
1940 basename.Remove(basename.Index(".cxx"));
1941 Printf("LoadSources:: Copying... path %s{cxx,h}",ssource.Data());
1942 gSystem->Exec(Form("cp %s.cxx . ",ssource.Data()));
1943 gSystem->Exec(Form("cp %s.h . ",ssource.Data()));
1945 // only needed for local compilation, in grid and proof mode
1946 // the task headers are uploaded
1947 // path.Remove(path.Index(gSystem->BaseName(path.Data())));
1948 // Printf("LoadSources:: Including path %s",path.Data());
1949 // if(path.Length()>0)gROOT->ProcessLine(Form(".include %s",path.Data()));
1950 Printf("LoadSources:: Loading... path %s",basename.Data());
1953 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
1956 result = gProof->LoadMacro(Form("%s.cxx++g",basename.Data()));
1959 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
1961 // what we want to compile
1962 anaSources += Form("%s.cxx ",basename.Data());
1963 // what we need as input...
1964 anaLibs += Form("%s.cxx %s.h ",basename.Data(),basename.Data());
1972 ::Error("AnalysisTrainPWG4Jets.C::LoadSources", "Could not load source %s", source);
1979 //______________________________________________________________________________
1980 TChain *CreateChain(const char *mode, const char *plugin_mode)
1982 // Create the input chain
1984 if (!strcmp(mode, "LOCAL")) imode = 0;
1985 if (!strcmp(mode, "PROOF")) imode = 1;
1986 if (!strcmp(mode, "GRID")) imode = 2;
1987 TChain *chain = NULL;
1992 if (!kLocalXMLDataset.Length()) {
1994 chain = new TChain("aodTree");
1997 in.open(kLocalDataList.Data());
2001 if (line.Length() == 0) continue;
2002 Printf("%d adding %s",ic,line.Data());
2003 chain->Add(line.Data());
2008 chain = CreateChainSingle(kLocalXMLDataset, "aodTree");
2011 if (!kLocalXMLDataset.Length()) {
2013 chain = new TChain("esdTree");
2016 in.open(kLocalDataList.Data());
2019 if (line.Length() == 0) continue;
2020 cout << " line = " << line << endl;
2021 chain->Add(line.Data());
2025 chain = CreateChainSingle(kLocalXMLDataset, "esdTree");
2033 // AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
2034 // AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
2036 TString treeName = "esdTree";
2037 if (iAODanalysis) treeName = "aodTree";
2038 chain = CreateChainSingle("wn.xml", treeName);
2043 if (chain && chain->GetNtrees()) return chain;
2047 //______________________________________________________________________________
2048 TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
2050 printf("*******************************\n");
2051 printf("*** Getting the ESD Chain ***\n");
2052 printf("*******************************\n");
2053 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
2055 if (!myCollection) {
2056 ::Error("AnalysisTrainPWG4Jets.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
2060 TChain* chain = new TChain(treeName);
2061 myCollection->Reset() ;
2062 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
2067 //______________________________________________________________________________
2068 Int_t SetupPar(char* pararchivename)
2070 if (!pararchivename || !strlen(pararchivename)) return -1;
2071 char processline[1024];
2072 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
2073 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
2074 ::Info("AnalysisTrainPWG4Jets.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
2075 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
2076 Form("%s.par",pararchivename));
2078 ::Error("AnalysisTrainPWG4Jets.C::SetupPar", "Cannot find %s.par", pararchivename);
2082 if (kPluginUse && kSaveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, kTrainName.Data()));
2083 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
2085 TString ocwd = gSystem->WorkingDirectory();
2086 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
2088 // check for BUILD.sh and execute
2089 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
2090 printf("*******************************\n");
2091 printf("*** Building PAR archive ***\n");
2092 printf("*******************************\n");
2093 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
2094 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
2099 // check for SETUP.C and execute
2100 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
2101 printf("*******************************\n");
2102 printf("*** Setup PAR archive ***\n");
2103 printf("*******************************\n");
2104 gROOT->Macro("PROOF-INF/SETUP.C");
2106 if (!gSystem->ChangeDirectory(ocwd.Data())){
2107 Error("Change back directory",Form("Cannot change to %s",ocwd.Data()));
2113 //______________________________________________________________________________
2114 AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
2116 // Check if user has a valid token, otherwise make one. This has limitations.
2117 // One can always follow the standard procedure of calling alien-token-init then
2118 // source /tmp/gclient_env_$UID in the current shell.
2119 // if (!AliAnalysisGrid::CreateToken()) return NULL;
2120 AliAnalysisAlien *plugin = new AliAnalysisAlien();
2121 // Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
2122 plugin->SetRunMode(plugin_mode);
2123 plugin->SetCheckCopy(kFALSE);
2124 if (kPluginUseProductionMode) plugin->SetProductionMode();
2125 plugin->SetJobTag(kJobTag);
2126 plugin->SetNtestFiles(1);
2127 // plugin->SetPreferedSE("ALICE::NIHAM::File");
2128 // Set versions of used packages
2129 plugin->SetAPIVersion("V1.1x");
2130 // plugin->SetAPIVersion("V1.0x");
2131 // plugin->SetAPIVersion("V2.4");
2132 plugin->SetROOTVersion(kPluginRootVersion);
2133 plugin->SetAliROOTVersion(kPluginAliRootVersion);
2134 // Declare input data to be processed.
2135 // Method 1: Create automatically XML collections using alien 'find' command.
2136 // Define production directory LFN
2137 plugin->SetGridDataDir(kGridDatadir.Data());
2138 // Set data search pattern
2139 if (iAODanalysis) plugin->SetDataPattern(Form(" %s/*/*AliAOD.root",kGridPassPattern.Data()));
2140 else plugin->SetDataPattern(Form(" %s/*/*AliESDs.root",kGridPassPattern.Data()));
2141 // ...then add run numbers to be considered
2142 // plugin->SetRunRange(kGridRunRange[0], kGridRunRange[1]);
2143 for (Int_t i=kGridRunRange[0]; i<=kGridRunRange[1]; i++) {
2144 Printf("AnalysisTrainPWG4Jets Adding run number %s", Form(kGridRunPattern.Data(),i));
2145 plugin->AddRunNumber(Form(kGridRunPattern.Data(),i));
2148 if(kGridLocalRunList.Length()>0){
2150 in1.open(kGridLocalRunList.Data());
2154 // just use run numbers, negatives will be excluded
2157 if(iRun>=0&&nRun>=kGridOffsetRunFromList&&(nRun<kGridMaxRunsFromList)){
2158 Printf("AnalysisTrainPWG4Jets Adding run number from File %d: %s",nRun,Form(kGridRunPattern.Data(),iRun));
2159 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
2163 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d: %d",nRun, iRun);
2168 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d: %d",nRun, iRun);
2172 // Method 2: Declare existing data files (raw collections, xml collections, root file)
2173 // If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
2174 // XML collections added via this method can be combined with the first method if
2175 // the content is compatible (using or not tags)
2176 // plugin->AddDataFile("tag.xml");
2177 // plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
2178 // Define alien work directory where all files will be copied. Relative to alien $HOME.
2179 TString alien_workdir = "";
2181 if (iAODanalysis) alien_workdir += "analysisAOD";
2182 else alien_workdir += "analysisESD";
2183 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s%s",kGridDataSet.Data(),kGridExtraAliendirLevel.Data());
2184 plugin->SetGridWorkingDir(alien_workdir.Data());
2186 // Declare alien output directory. Relative to working directory.
2187 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
2188 plugin->SetGridOutputDir(kGridOutdir);
2190 // Add external packages
2191 plugin->AddExternalPackage("boost::v1_43_0");
2192 plugin->AddExternalPackage("cgal::v3.6");
2193 plugin->AddExternalPackage("fastjet::v2.4.2");
2196 // set extra libs before par file compilation
2197 anaLibs += kGridExtraFiles;
2198 anaLibs = anaLibs.Strip();
2199 Printf("anaLibs %s",anaLibs.Data());
2200 Printf("anaLibsExtra %s",anaLibsExtra.Data());
2202 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs.Data());
2203 if (anaLibsExtra.Length()) plugin->SetAdditionalRootLibs(anaLibsExtra.Data());
2205 TString ana_sources = "";
2206 TString ana_add = "";
2207 if (kUsePAR && anaPars.Length()) {
2208 printf("%s\n", anaPars.Data());
2211 arr = anaPars.Tokenize(" ");
2213 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
2217 // Declare the analysis source files names separated by blancs. To be compiled runtime
2218 // using ACLiC on the worker nodes.
2219 ana_sources = anaSources.Strip();
2220 // Declare all libraries (other than the default ones for the framework. These will be
2221 // loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
2223 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
2224 plugin->SetExecutableCommand(kPluginExecutableCommand.Data());
2225 // Declare the output file names separated by blancs.
2226 // (can be like: file.root or file.root@ALICE::Niham::File)
2227 plugin->SetMergeExcludes(kGridMergeExclude);
2228 plugin->SetMaxMergeFiles(kGridMaxMergeFiles);
2229 plugin->SetNrunsPerMaster(kGridRunsPerMaster);
2230 plugin->SetMergeViaJDL(kPluginMergeViaJDL);
2231 // Use fastread option
2232 plugin->SetFastReadOption(kPluginFastReadOption);
2233 // UseOverwrite mode
2234 plugin->SetOverwriteMode(kPluginOverwriteMode);
2235 // Optionally define the files to be archived.
2236 // plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
2237 plugin->SetOutputToRunNo(kPluginOutputToRunNumber); // write the output to subdirs named after run number
2239 // Put default output files to archive
2240 TString listhists = "";
2241 TString listaods = "";
2242 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
2243 TIter next(mgr->GetOutputs());
2244 AliAnalysisDataContainer *output;
2245 while ((output=(AliAnalysisDataContainer*)next())) {
2246 const char *filename = output->GetFileName();
2247 if (!(strcmp(filename, "default"))) {
2248 if (!mgr->GetOutputEventHandler()) continue;
2249 filename = mgr->GetOutputEventHandler()->GetOutputFileName();
2250 if (listaods.Length()) listaods += " ";
2251 listaods += filename;
2253 if(!listhists.Contains(filename)){
2254 if (listhists.Length()) listhists += " ";
2255 listhists += filename;
2260 if (mgr->GetExtraFiles().Length()) {
2261 if (listaods.Length()) listaods += " ";
2262 listaods += mgr->GetExtraFiles();
2265 // if we do not fill the aod we do not need to store it
2266 // kGridMergeExclude = listaods;
2269 TString outputFiles = "";
2270 outputFiles += mgr->GetExtraFiles();
2271 if (listhists.Length()) outputFiles += " ";
2272 outputFiles += listhists;
2273 plugin->SetDefaultOutputs(kFALSE);
2274 Printf("%s:%d Starting with the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
2276 // no harm done when we try to remove something that is not there :)
2277 if(!(kSaveAOD&(1<<0))){
2278 outputFiles.ReplaceAll("AliAOD.root ","");
2279 listaods.ReplaceAll("AliAOD.root ","");
2281 if(!(kSaveAOD&(1<<1))){
2282 if(kDeltaAODJetName.Length())outputFiles.ReplaceAll(kDeltaAODJetName.Data(),"");
2283 if(kDeltaAODJetName.Length())listaods.ReplaceAll(kDeltaAODJetName.Data(),"");
2286 if(!(kSaveAOD&(1<<2))){
2287 if(kDeltaAODPartCorrName.Length())outputFiles.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
2288 if(kDeltaAODPartCorrName.Length())listaods.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
2290 if(!(kSaveAOD&(1<<3))){
2291 if(kDeltaAODJCORRANName.Length())outputFiles.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
2292 if(kDeltaAODJCORRANName.Length())listaods.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
2296 plugin->SetDefaultOutputs(kFALSE);
2297 Printf("%s:%d Saving the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
2298 plugin->SetOutputFiles(outputFiles.Data());
2301 TString outputArchive;
2302 outputArchive = Form("log_archive.zip:std*@%s","disk=1");
2303 listaods.ReplaceAll(" ", ",");
2304 listhists.ReplaceAll(" ", ",");
2305 if (listhists.Length()){
2306 outputArchive += " ";
2307 outputArchive += "root_archive.zip:";
2308 outputArchive += listhists;
2309 if (listaods.Length()){
2310 outputArchive += ",";
2311 outputArchive += listaods;
2313 outputArchive += Form("@%s", kGridOutputStorages.Data());
2317 if (listaods.Length()){
2318 // we have only aod'ish output
2319 outputArchive += " ";
2320 outputArchive += "root_archive.zip:";
2321 outputArchive += listaods;
2322 outputArchive += Form("@%s", kGridOutputStorages.Data());
2325 // no other outputs than std..
2326 ::Fatal("AnalysisTrainPWG4Jets", "No task output !");
2330 plugin->SetDefaultOutputs(kFALSE);
2331 plugin->SetOutputArchive(outputArchive);
2334 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
2335 plugin->SetAnalysisMacro(Form("%s.C", kTrainName.Data()));
2336 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
2337 plugin->SetSplitMaxInputFileNumber(kGridFilesPerJob);
2338 // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
2339 // plugin->SetMaxInitFailed(5);
2340 // Optionally resubmit threshold.
2341 // plugin->SetMasterResubmitThreshold(90);
2342 // Optionally set time to live (default 30000 sec)
2343 plugin->SetTTL(80000); // 22h...
2344 // Optionally set input format (default xml-single)
2345 plugin->SetInputFormat("xml-single");
2346 // Optionally modify the name of the generated JDL (default analysis.jdl)
2347 plugin->SetJDLName(Form("%s.jdl", kTrainName.Data()));
2348 // Optionally modify the executable name (default analysis.sh)
2349 plugin->SetExecutable(Form("%s.sh", kTrainName.Data()));
2350 // Optionally modify job price (default 1)
2351 plugin->SetPrice(1);
2352 // Optionally modify split mode (default 'se')
2353 plugin->SetSplitMode("se");
2357 //______________________________________________________________________________
2360 // Write train configuration in a file. The file name has the format:
2361 // train_[trainName]_ddMonthyyyy_time.C
2363 gSystem->Exec("date +%d%b%Y_%Hh%M > date.tmp");
2364 ifstream fdate("date.tmp");
2365 if (!fdate.is_open()) {
2366 ::Error("AnalysisTrainPWG4Jets.C::Export","Could not generate file name");
2369 const char date[64];
2370 fdate.getline(date,64);
2372 gSystem->Exec("rm date.tmp");
2373 kTrainName = Form("train_%s_%s", kTrainName.Data(), date);
2375 kTrainName = Form("train_%s", kTrainName.Data());
2377 TString cdir = gSystem->WorkingDirectory();
2378 gSystem->MakeDirectory(kTrainName);
2379 gSystem->ChangeDirectory(kTrainName);
2381 out.open(Form("%sConfig.C",kTrainName.Data()), ios::out);
2383 ::Error("AnalysisTrainPWG4Jets.C::Export", "Cannot open ConfigTrain.C for writing");
2387 out << " kTrainName = " << "\"" << kTrainName.Data() << "\";" << endl;
2388 out << " kProofCluster = " << "\"" << kProofCluster.Data() << "\";" << endl;
2389 out << " kProofUseAFPAR = " << kProofUseAFPAR << ";" << endl;
2391 out << " kProofAFversion = " << kProofAFversion.Data() << ";" << endl;
2392 out << " kProofDataSet = " << "\"" << kProofDataSet.Data() << "\";" << endl;
2393 out << " kPluginUse = " << kPluginUse << ";" << endl;
2394 out << " kUsePAR = " << kUsePAR << ";" << endl;
2395 out << " kUseCPAR = " << kUseCPAR << ";" << endl;
2396 out << " kPluginRootVersion = " << "\"" << kPluginRootVersion.Data() << "\";" << endl;
2397 out << " kPluginAliRootVersion = " << "\"" << kPluginAliRootVersion.Data() << "\";" << endl;
2398 out << " kGridDatadir = " << "\"" << kGridDatadir.Data() << "\";" << endl;
2399 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
2400 out << " kGridOutdir = " << "\"" << kGridOutdir.Data() << "\";" << endl;
2401 out << " kGridMaxMergeFiles = " << kGridMaxMergeFiles << ";" << endl;
2402 out << " kGridMergeExclude = " << "\"" << kGridMergeExclude.Data() << "\";" << endl;
2403 out << " kGridRunsPerMaster = " << kGridRunsPerMaster << ";" << endl;
2404 out << " kGridFilesPerJob = " << kGridFilesPerJob << ";" << endl;
2405 out << " kGridRunRange[0] = " << kGridRunRange[0] << ";" << endl;
2406 out << " kGridRunRange[1] = " << kGridRunRange[1] << ";" << endl;
2407 out << " kUseDebug = " << kUseDebug << ";" << endl;
2408 out << " kUseMC = " << kUseMC << ";" << endl;
2409 out << " kUseESDTags = " << kUseESDTags << ";" << endl;
2410 out << " kUseKinefilter = " << kUseKinefilter << ";" << endl;
2411 out << " kUseTR = " << kUseTR << ";" << endl;
2412 out << " kUseAODTags = " << kUseAODTags << ";" << endl;
2413 out << " kSaveTrain = " << "kFALSE;" << endl << endl;
2414 out << " // Analysis modules" << endl;
2415 out << " iAODanalysis = " << iAODanalysis << ";" << endl;
2416 out << " iAODhandler = " << iAODhandler << ";" << endl;
2417 out << " iESDfilter = " << iESDfilter << ";" << endl;
2418 out << " iJETAN = " << iJETAN << ";" << endl;
2419 out << "// Configuration fot the wagons" << endl;
2421 ::Info("AnalysisTrainPWG4Jets.C::WriteConfig", "Train configuration wrote to file %s", Form("config_%s.C", kTrainName.Data()));
2422 gSystem->ChangeDirectory(cdir);
2425 //______________________________________________________________________________
2426 Bool_t LoadConfig(const char *filename)
2428 // Read train configuration from file
2429 if (gSystem->AccessPathName(filename)) {
2430 ::Error("AnalysisTrainPWG4Jets.C::LoadConfig", "Config file name not found");
2433 gROOT->ProcessLine(Form(".x %s", filename));
2434 ::Info("AnalysisTrainPWG4Jets.C::LoadConfig", "Train configuration loaded from file %s", filename);
2439 Printf(">>> Patching JDL");
2440 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
2441 AliAnalysisAlien* gridHandler = (AliAnalysisAlien*)mgr->GetGridHandler();
2442 TGridJDL *jdl = gridHandler->GetGridJDL();
2443 if(iJETAN)jdl->AddToPackages("fastjet","v2.4.0");
2444 gridHandler->WriteJDL(kFALSE);
2445 Printf("<<< Patching JDL");
2449 Bool_t PatchAnalysisMacro(){
2450 Printf(">>> Patching AnalysisMacro");
2451 gSystem->Exec(Form("mv %s.C %s.C_tmp",kTrainName.Data(),kTrainName.Data()));
2454 in1.open(Form("%s.C_tmp", kTrainName.Data()));
2457 while(in1.getline(cLine,250)){
2462 index = st.Index("gSystem->Load(\"libPhysics\");");
2463 index += strlen("gSystem->Load(\"libPhysics\");");
2467 arr = anaLibs.Tokenize(" ");
2470 add += "\n\n // added by CKB \n";
2471 while ((objstr=(TObjString*)next())){
2472 if(objstr->GetString().Contains("PWG3"))continue;
2473 if(objstr->GetString().EndsWith(".so"))add += Form("gSystem->Load(\"%s\");\n",objstr->GetString().Data());
2477 // add += Form("AliLog::SetGlobalLogLevel(%d);\n",AliLog::GetGlobalLogLevel());
2480 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2481 add += "\n\n // added by CKB \n";
2482 if(kErrorIgnoreLevel>0)add += Form("gErrorIgnoreLevel = %d;\n",kErrorIgnoreLevel);
2483 add += "\n gSystem->AddIncludePath(\"./\"); \n";
2484 add += "\n gSystem->SetFPEMask(); \n";
2487 if(gGrid&&kPluginAliRootVersion.Length()==0){
2489 add += "\n // Dirty hack for TRD reference data \n";
2490 add += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2491 add += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2496 add += "// BKC \n\n";
2497 st.Insert(index,add.Data());
2500 // st.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
2503 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
2504 index = st.Index("gSystem->AddIncludePath(\"-I$"); // uncommen $ALICE_ROOT include for par files
2505 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2506 st.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2509 if(AliLog::GetGlobalLogLevel()==AliLog::kFatal){
2510 index = st.Index("AliLog::SetGlobal"); // ncomment setting of log level, do my own
2511 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2512 st.Insert(index,"AliLog::SetGlobalLogLevel(AliLog::kFatal);// CKB \n // CKB comment out for own setting \n //");
2516 out.open(Form("%s.C", kTrainName.Data()));
2521 Printf("<<< Patching AnalysisMacro");
2527 Printf(">>> Patching Merge Macro");
2528 gSystem->Exec(Form("mv %s_merge.C %s_merge.C_tmp",kTrainName.Data(),kTrainName.Data()));
2531 in2.open(Form("%s_merge.C_tmp", kTrainName.Data()));
2533 while(in2.getline(cLine,250)){
2537 index = st2.Index("gSystem->Load(\"libPhysics\");");
2538 index += strlen("gSystem->Load(\"libPhysics\");");
2540 add2 += "\n gSystem->AddIncludePath(\"./\"); \n";
2541 if(gGrid&&kPluginAliRootVersion.Length()==0){
2543 add2 += "\n // Dirty hack for TRD reference data \n";
2544 add2 += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2545 add2 += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2549 add2 += "// BKC \n\n";
2550 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2551 st2.Insert(index,add.Data());
2555 // st2.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
2558 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
2559 index = st2.Index("gSystem->AddIncludePath(\"-I$"); // uncomment $ALICE_ROOT include for par files
2560 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2561 st2.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2564 // do not exclude the extra files from merign, this is done explicitly in this train script
2565 // index = st2.Index("mergeExcludes +="); // uncommen $ALICE_ROOT include for par files
2566 // if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2567 // st2.Insert(index,"// CKB comment out, handled explicitly by the train macro \n //");
2571 out2.open(Form("%s_merge.C", kTrainName.Data()));
2575 out2 << st2 << endl;
2576 Printf("<<< Patching Merging Macro");