]> git.uio.no Git - u/mrichter/AliRoot.git/blobdiff - HLT/configure.ac
set variable in order to match new make.dict
[u/mrichter/AliRoot.git] / HLT / configure.ac
index a71560752cedfe82694a568634a16f4d4e3204e2..e74194a6705e3fb80d503f014fb131147f551a60 100644 (file)
@@ -5,7 +5,7 @@ dnl template for the configuration script for the Alice HLT
 dnl framework and components
 dnl 
 dnl ------------------------------------------------------------------
-AC_INIT([Alice High Level Trigger] , [0.4-dev], [Matthias.Richter@ift.uib.no], alice-hlt)
+AC_INIT([Alice High Level Trigger] , [0.8-dev], [Matthias.Richter@ift.uib.no], alice-hlt)
 
 dnl ------------------------------------------------------------------
 dnl the package from CVS contains the old Makefiles as well. In order to
@@ -26,6 +26,13 @@ AC_PROG_LIBTOOL
 
 AC_DEBUG
 AC_OPTIMIZATION
+AM_CONDITIONAL(STANDALONE_SAMPLELIB, test 0 )
+
+dnl ------------------------------------------------------------------
+dnl A warning posted into the auto-generated files
+dnl Does NOT concern this file ;-)
+AUTOGENERATED_WARNING="!!!!!!!    DO NOT EDIT THIS FILE !!!!!!"
+AC_SUBST([AUTOGENERATED_WARNING])
 
 dnl ------------------------------------------------------------------
 dnl
@@ -33,6 +40,46 @@ dnl Check for ROOT
 dnl
 ROOT_PATH(, [have_root=1], [AC_ERROR([Stop! The HLT package needs ROOT.])])
 AM_CONDITIONAL(HAVE_ROOT, test "x$have_root" = "x1" )
+AC_SUBST([ROOTSYS])
+ROOTBINDIR=`dirname $ROOTEXEC`
+AC_SUBST([ROOTBINDIR])
+
+dnl test for additional required root libraries and headers
+LIBS='-ldl'
+if test "x$have_root" = "x1"; then
+  AC_LANG_PUSH(C++)
+  save_CPPFLAGS=$CPPFLAGS
+  save_LDFLAGS=$LDFLAGS
+  save_LIBS=$LIBS
+  CPPFLAGS=`echo $save_CPPFLAGS; for i in ${ROOTINCDIR}; do echo -n "-I$i " ; done`
+  
+  # we check for the libSTEER library which is linked to
+  # - the ROOT libs libGeom libMinuit libVMC libEG
+  # - the AliRoot libESD libRAWData (libRAWDatarec from v4-04-Rev-07)
+  # - ROOT libCint needs also libdl
+  # - from Nov 1 2006 TTreeFormula is needed by AliTagAnalysis and requires
+  #   libTreePlayer.so
+  # - from Jan 07 libESD also depends on libXMLIO
+  ROOT_CHECKLIBS='Geom Minuit EG VMC TreePlayer XMLIO'
+  for CHECKLIB in $ROOT_CHECKLIBS ; do
+    LDFLAGS="$save_LDFLAGS -L${ROOTLIBDIR}"
+    LIBS="$save_LIBS $ROOTLIBS $ADD_ROOTLIBS"
+    AC_CHECK_LIB([$CHECKLIB],[_init], [ADD_ROOTLIBS="$ADD_ROOTLIBS -l$CHECKLIB"])
+  done
+
+  # TBuffer.h has been made pure virtual in root v5-15-02 and one
+  # has to derive from TBufferFile.h (needed for BASE/AliHLTMessage.h)
+  AC_CHECK_HEADERS([TBufferFile.h])
+
+  # TView.h has been made pure virtual right after root v5-15-02 and one
+  # has to derive from TView3D.h (needed for TPCLib/OnlineDisplay/AliHLTTPCDisplay3D)
+  AC_CHECK_HEADERS([TView3D.h])
+
+  CPPFLAGS=$save_CPPFLAGS
+  LDFLAGS=$save_LDFLAGS
+  LIBS=$save_LIBS
+  AC_LANG_POP(C++)
+fi
 
 dnl ------------------------------------------------------------------
 # TODO: make this configurable through arguments
@@ -48,101 +95,122 @@ CPPFLAGS="$CPPFLAGS ${ROOTCFLAGS}"
 dnl ------------------------------------------------------------------
 dnl check for AliRoot features
 AC_LANG_PUSH(C++)
-AC_MSG_CHECKING([for AliRoot])
 have_aliroot=no
-with_aliroot=yes
-if test "x$with_aliroot" = "xyes" || test "x$with_aliroot" = "x" ; then
+AC_ARG_WITH(aliroot,[  --with-aliroot  top of the AliRoot installation],
+                   [test -d $with_aliroot && ALICE_ROOT=$with_aliroot],
+                   [])
+
+if test "x$ALICE_ROOT" != "x" && test -d $ALICE_ROOT ; then
+  dnl ------------------------------------------------------------------
+  dnl Try to estimate the system architecture
+  case $host_os:$host_cpu in
+  linux*:x86_64*)      alice_target='linuxx8664gcc'            ;;
+  linux*)              alice_target='linux'                    ;;
+  *)                   alice_target='unknown'                  ;;
+  esac
+  if test "x$alice_target" = "xunknown" ; then
+    if test -z $ALICE_TARGET ; then
+    AC_MSG_ERROR([Can not estimate system architecture.
+    To avoid the problem, set the ALICE_TARGET variable appropriately.
+    Please send the following information to Matthias.Richter@ift.uib.no:
+       ${PACKAGE}: no AliRoot target definition for os=$host_os and cpu=$host_cpu ])
+    else
+    AC_MSG_NOTICE([Unknown system architecture.
+    Please send the following information to Matthias.Richter@ift.uib.no:
+       ${PACKAGE}: no AliRoot target definition for os=$host_os and cpu=$host_cpu ])  
+    fi
+  else
+    if test "x$ALICE_TARGET" != "x" && test "x$ALICE_TARGET" != "x$alice_target" ; then
+    AC_MSG_WARN([The ALICE_TARGET variable does not match your current system
+    overriding $ALICE_TARGET by $alice_target])
+    fi
+    ALICE_TARGET=$alice_target
+  fi
+  ALIROOTBINDIR=${ALICE_ROOT}/bin/tgt_${ALICE_TARGET}
   ALIROOTLIBDIR=${ALICE_ROOT}/lib/tgt_${ALICE_TARGET}
   ALIROOTINCDIR=${ALICE_ROOT}/include
-elif test "x$with_aliroot" != "xno" ; then
-  # TODO: think about the tgt_* subfolder
-  ALICE_ROOT="$with_aliroot"
-  ALIROOTLIBDIR="$ALICE_ROOT/lib"
-  ALIROOTINCDIR="$ALICE_ROOT/include"
+  test -d ${ALIROOTBINDIR} || AC_MSG_WARN([can not find AliRoot binary directory $ALIROOTBINDIR])
+  test -d ${ALIROOTLIBDIR} || AC_MSG_WARN([can not find AliRoot library directory $ALIROOTLIBDIR])
+  test -d ${ALIROOTINCDIR} || AC_MSG_WARN([can not find AliRoot include directory $ALIROOTINCDIR])
 fi
+
+AC_MSG_CHECKING([for AliRoot])
 if test "x$ALICE_ROOT" != "x" \
+   && test -d ${ALIROOTBINDIR} \
    && test -d ${ALIROOTLIBDIR} \
    && test -d ${ALIROOTINCDIR}; then
   have_aliroot=$ALICE_ROOT
 else
+  ALIROOTBINDIR=
   ALIROOTLIBDIR=
   ALIROOTINCDIR=
 fi
 AC_MSG_RESULT([$have_aliroot])
 
 if test ! "x$have_aliroot" = "xno" ; then
-  # we check for the libSTEER library which is linked to
-  # - the ROOT libs libGeom libMinuit libVMC libEG
-  # - the AliRoot libESD libRAWData (libRAWDatarec from v4-04-Rev-07)
-  # - ROOT libCint needs also libdl
   ALIROOT_CPPFLAGS="-I${ALIROOTINCDIR} -I${ALICE_ROOT}/RAW"
   ALIROOT_LDFLAGS="-L${ALIROOTLIBDIR}"
-  ALIROOT_LIBS="-lESD -lGeom -lMinuit -lVMC -lEG -ldl -lSTEER"
+  ALIROOT_LIBS="-lESD $ADD_ROOTLIBS"
   save_CPPFLAGS=$CPPFLAGS
   save_LDFLAGS=$LDFLAGS
   save_LIBS=$LIBS
   CPPFLAGS="$save_CPPFLAGS $ALIROOT_CPPFLAGS"
   LDFLAGS="$save_LDFLAGS -L${ROOTLIBDIR} $ALIROOT_LDFLAGS"
-  LIBS="$save_LIBS $ROOTLIBS $ALIROOT_LIBS"
+  
   # check for certain AliRoot libraries/files/features
-  if test ! "x$have_aliroot" = "xno" ; then
-    # the RAWReader classe are needed by the TPCLib/AliHLTTPCDigitReaderPacket
-    # and by the STEER library. From version v4-04-Rev-07 on the RawReader classes
-    # are in libRAWDatarec, before in libRAWData
-    have_alirawdata=yes
-    AC_MSG_CHECKING(for AliRawReader classes in RAWData libraries)
-    if test ! "x$have_alirawdata" = "xno" ; then
-      CHECKLIB="-lRAWDatarec"
-      LIBS="$save_LIBS $ROOTLIBS $ALIROOT_LIBS -lRAWDatabase $CHECKLIB"
-      AC_LINK_IFELSE([AC_LANG_PROGRAM([#include <AliRawReaderMemory.h>
-                                      #include <AliRawReaderFile.h>
-                                      #include <AliRawReaderDate.h>
-                                      #include <AliRawReaderRoot.h>], 
-                                      [AliRawReaderMemory mreader;
-                                      AliRawReaderFile freader;
-                                      AliRawReaderDate dreader(NULL,0);
-                                      AliRawReaderRoot rreader(NULL,0)])],
-                                      [AC_DEFINE(HAVE_ALIRAWDATA)
-                                      ALIROOT_LIBS="$ALIROOT_LIBS -lRAWDatabase $CHECKLIB"
-                                      have_alirawdata=$CHECKLIB], 
-                                     [have_alirawdata=no])
-      # second pass with -RAWData
-      if test "x$have_alirawdata" = "xno" ; then
-        CHECKLIB="-lRAWData"
-        LIBS="$save_LIBS $ROOTLIBS $ALIROOT_LIBS $CHECKLIB"
-        AC_LINK_IFELSE([AC_LANG_PROGRAM([#include <AliRawReaderMemory.h>
-                                      #include <AliRawReaderFile.h>
-                                      #include <AliRawReaderDate.h>
-                                      #include <AliRawReaderRoot.h>], 
-                                        [AliRawReaderMemory mreader;
-                                      AliRawReaderFile freader;
-                                      AliRawReaderDate dreader(NULL,0);
-                                      AliRawReaderRoot rreader(NULL,0);])],
-                                        [AC_DEFINE(HAVE_ALIRAWDATA)
-                                      ALIROOT_LIBS="$ALIROOT_LIBS $CHECKLIB"
-                                      have_alirawdata=$CHECKLIB], 
-                                     [have_alirawdata=no])
-      fi
-    fi
-    AC_MSG_RESULT($have_alirawdata)
-  fi
+  # libSTEERBase present since Aug 7 2007
+  LIBS="$save_LIBS $ROOTLIBS $ALIROOT_LIBS"
+  CHECKLIB=STEERBase
+  AC_CHECK_LIB([$CHECKLIB],[_init],[ALIROOT_LIBS="$ALIROOT_LIBS -l$CHECKLIB"])
 
-  have_alisteer=yes
-  #AC_CHECK_HEADERS([AliRun.h],[have_alisteer=yes])
-  AC_MSG_CHECKING(for AliRun in -lSTEER)
-  if test "x$have_alisteer" = "xyes" ; then
-    AC_LINK_IFELSE([AC_LANG_PROGRAM([#include <AliRun.h>], [AliRun aliroot])],
-                                    [AC_DEFINE(HAVE_ALISTEER)], 
-                                   [have_alisteer=no
-                                    have_aliroot=no])
-  fi
-  AC_MSG_RESULT($have_alisteer)
+  LIBS="$save_LIBS $ROOTLIBS $ALIROOT_LIBS"
+  CHECKLIB=AOD
+  AC_CHECK_LIB([$CHECKLIB],[_init],[ALIROOT_LIBS="$ALIROOT_LIBS -l$CHECKLIB"])
+
+  # CBD library is present since AliRoot version v4-05-00 (02.06.2006)
+  LIBS="$save_LIBS $ROOTLIBS $ALIROOT_LIBS"
+  CHECKLIB=CDB
+  AC_CHECK_LIB([$CHECKLIB],[_init],[ALIROOT_LIBS="$ALIROOT_LIBS -l$CHECKLIB"])
+
+  # splitted RAW libraries since AliRoot version v4-04-Rev-07 (09.08.2006)
+  have_alirawdata=no
+  LIBS="$save_LIBS $ROOTLIBS $ALIROOT_LIBS"
+  CHECKLIB=RAWDatabase
+  AC_CHECK_LIB([$CHECKLIB],[_init],
+       [ALIROOT_LIBS="$ALIROOT_LIBS -l$CHECKLIB"
+        LIBS="$save_LIBS $ROOTLIBS $ALIROOT_LIBS"
+        CHECKLIB=RAWDatarec
+        AC_CHECK_LIB([$CHECKLIB],[_init],
+               [ALIROOT_LIBS="$ALIROOT_LIBS -l$CHECKLIB"
+               AC_DEFINE(HAVE_ALIRAWDATA)
+               have_alirawdata=$CHECKLIB])],
+       [# second pass with -RAWData
+        CHECKLIB="-lRAWData"
+        LIBS="$save_LIBS $ROOTLIBS $ALIROOT_LIBS $CHECKLIB -lSTEER"
+        AC_LINK_IFELSE([AC_LANG_PROGRAM([#include <AliRawReaderMemory.h>
+                                      #include <AliRawReaderFile.h>
+                                      #include <AliRawReaderDate.h>
+                                      #include <AliRawReaderRoot.h>], 
+                                     [AliRawReaderMemory mreader;
+                                      AliRawReaderFile freader;
+                                      AliRawReaderDate dreader(NULL,0);
+                                      AliRawReaderRoot rreader(NULL,0);])],
+                                     [AC_DEFINE(HAVE_ALIRAWDATA)
+                                      ALIROOT_LIBS="$ALIROOT_LIBS $CHECKLIB"
+                                      have_alirawdata=$CHECKLIB], 
+                                     [have_alirawdata=no])
+       ]) dnl AC_CHECK_LIB RAWDatabase
+  AC_MSG_CHECKING([for AliRawReader classes in RAWData libraries])
+  AC_MSG_RESULT([$have_alirawdata])
 
+  dnl
+  dnl required header files and libraries for the AliHLTTPC library  
+  dnl
   if test ! "x$have_aliroot" = "xno" ; then
     # the HLTTPCLib needs to link agains TPCbase and TPCrec
     # TPC library for AliTPCParam and AliSimDigits used in 
     # AliHLTTPCFileHandler.h and AliHLTTPCDisplay.cxx
+    # fram May 07 TPCbase depends on libGui.so
     saveALIROOT_CPPFLAGS="$ALIROOT_CPPFLAGS"
     ALIROOT_CPPFLAGS="$saveALIROOT_CPPFLAGS -I${ALICE_ROOT}/TPC"
     CPPFLAGS="$save_CPPFLAGS $ALIROOT_CPPFLAGS"
@@ -150,7 +218,7 @@ if test ! "x$have_aliroot" = "xno" ; then
     AC_MSG_CHECKING(for required classes in TPC libraries)
     if test ! "x$have_alitpc" = "xno" ; then
       save_ALIROOT_LIBS=$ALIROOT_LIBS
-      ALIROOT_LIBS="$save_ALIROOT_LIBS -lTPCbase -lTPCrec"
+      ALIROOT_LIBS="$save_ALIROOT_LIBS -lTPCbase -lTPCrec -lGui -lSTEER"
       LIBS="$save_LIBS $ROOTLIBS $ALIROOT_LIBS"
       AC_LINK_IFELSE([AC_LANG_PROGRAM([#include <AliSimDigits.h>
                                       #include <AliTPCParam.h>
@@ -175,6 +243,62 @@ if test ! "x$have_aliroot" = "xno" ; then
     fi
     AC_MSG_RESULT($have_alitpc)
   fi
+  AC_CHECK_HEADERS([AliTPCCalibPulser.h], [], [AC_DEFINE(HAVE_NOT_ALITPCCALIBPULSER)])
+  AC_CHECK_HEADERS([AliTPCCalibPedestal.h], [], [AC_DEFINE(HAVE_NOT_ALITPCCALIBPEDESTAL)])
+
+  LIBS="$save_LIBS $ROOTLIBS $ALIROOT_LIBS"
+  CHECKLIB=STEER
+  AC_CHECK_LIB([$CHECKLIB],[_init],[ALIROOT_LIBS="$ALIROOT_LIBS -l$CHECKLIB"],[have_aliroot=no])
+
+  dnl
+  dnl check whether AliLog supports notification callback
+  dnl
+  LIBS="$save_LIBS $ROOTLIBS $ALIROOT_LIBS"
+  have_alilog_notification=no
+  if test ! "x$have_aliroot" = "xno" ; then
+  AC_MSG_CHECKING([whether AliLog supports notification callback])
+  AC_LINK_IFELSE([AC_LANG_PROGRAM([#include <AliLog.h>], 
+                                 [AliLog::AliLogNotification fct])],
+                                  [have_alilog_notification=yes], 
+                                 [AC_DEFINE(NO_ALILOG_NOTIFICATION)])
+  AC_MSG_RESULT([$have_alilog_notification])
+  fi
+
+  dnl
+  dnl Check for the interface of AliExternalTrackParam which has been changed
+  dnl in revision 1.17 of AliExternalTrackParam.h (AliRoot version v4-05-04
+  dnl or higher)
+  externaltrackparam_version=1
+  AC_LINK_IFELSE([AC_LANG_PROGRAM([#include <AliExternalTrackParam.h>], 
+                                  [AliExternalTrackParam trackparam;
+                                  Double_t param[[5]]; Double_t covar[[15]];
+                                  trackparam.Set(0., 0., param, covar);])],
+                                  [externaltrackparam_version=2],
+                                 [AC_DEFINE(EXTERNALTRACKPARAM_V1)])
+  AC_MSG_CHECKING(for version of AliExternalTrackParam)
+  AC_MSG_RESULT($externaltrackparam_version)
+
+  dnl
+  dnl required header files and libraries for the AliHLTPHOS library  
+  dnl
+  have_alicalorawstream=no
+  if test ! "x$have_aliroot" = "xno" ; then
+    # this can not be used as AliCaloRawStream.h indirectly depends on TString.h
+    #AC_CHECK_HEADERS([AliCaloRawStream.h], [have_alicalorawstream=yes])
+    AC_MSG_CHECKING([for AliCaloRawStream.h usability])
+    AC_LINK_IFELSE([AC_LANG_PROGRAM([#include <TString.h>
+                                    #include <AliCaloRawStream.h>], 
+                                    [int i])],
+                                    [AC_DEFINE(HAVE_ALICALORAWSTREAM)
+                                    have_alicalorawstream=yes], 
+                                   [])
+    AC_MSG_RESULT([$have_alicalorawstream])
+  fi
+
+  dnl
+  dnl required header files and libraries for the AliHLTTRD library  
+  dnl
+  AC_CHECK_HEADERS([AliGeomManager.h], [], [AC_DEFINE([HAVNT_ALIGEOMMANAGER])])
 
   if test ! "x$have_alirawdata" = "xno" ; then
     # check for header files needed by the TPCLib/AliHLTTPCDigitReaderPacket
@@ -187,7 +311,7 @@ if test ! "x$have_aliroot" = "xno" ; then
 
   have_tpc_mapping=no
   if test ! "x$have_aliroot" = "xno" ; then
-    # the TPCLib/AliHLTTPCRawReader needs the actual Pad layot of the TPC 
+    # the TPCLib/AliHLTTPCRawReader needs the actual Pad layout of the TPC 
     # which is stored in the TPC/mapping/Patchx.data files from
     # AliRoot version v4-04-Release (May 2006)
     AH_TEMPLATE([HAVE_TPC_MAPPING],[TPC pad mapping available])
@@ -200,26 +324,157 @@ if test ! "x$have_aliroot" = "xno" ; then
     
   fi
   AC_MSG_CHECKING([for TPC mapping layout])
-  AM_CONDITIONAL(USE_TPC_MAPPING, test x$have_tpc_mapping = xyes)
   AC_MSG_RESULT([$have_tpc_mapping])
-  
+
   if test "x$have_aliroot" = "xno" ; then
-    ALIROOT_CPPFLAGS=
+    # 2007-08-18 dont reset ALIROOT_CPPFLAGS in order to allow compilation
+    # but library dependencies might not be resolved completely
+    #ALIROOT_CPPFLAGS=
+    AC_MSG_WARN([some of the AliRoot library dependencies are not resolved. You
+    can force compilation of detector libs by --enable-<detector>, but be aware
+    of unresolved references at runtime.])
+    AC_MSG_WARN([       ------------------------------------------ ])
+    AC_MSG_WARN([       Report this to $PACKAGE_BUGREPORT ])
+    AC_MSG_WARN([       ------------------------------------------ ])
     ALIROOT_LDFLAGS=
     ALIROOT_LIBS=
   fi
   CPPFLAGS=$save_CPPFLAGS
   LDFLAGS=$save_LDFLAGS
   LIBS=$save_LIBS
-  if test ! "x$have_aliroot" = "xno" ; then
-    CPPFLAGS="$CPPFLAGS -DALIROOTVERSION=\\\"Unknown\\\""
-  fi
 fi
 AC_LANG_POP(C++)
+AC_SUBST([ALICE_ROOT])
 AC_SUBST([ALIROOT_CPPFLAGS])
 AC_SUBST([ALIROOT_LDFLAGS])
+AC_SUBST([ALIROOTBINDIR])
+AC_SUBST([ALIROOTLIBDIR])
 AC_SUBST([ALIROOT_LIBS])
-CPPFLAGS="$CPPFLAGS -DROOTVERSION=\\\"`${ROOTCONF} --version`\\\""
+AM_CONDITIONAL(USE_TPC_MAPPING, test x$have_tpc_mapping = xyes)
+
+HLTBASE_CPPFLAGS='-I${top_srcdir}/BASE'
+HLTBASE_LDFLAGS=
+AC_SUBST([HLTBASE_CPPFLAGS])
+AC_SUBST([HLTBASE_LDFLAGS])
+
+dnl ------------------------------------------------------------------
+dnl check for the HLT PubSub Framework
+dnl namely for the existence of the HOMER library
+dnl from Sep 2007, the HOMER lib has been incorporated into the alice-hlt
+dnl package. It os though possible to choose an external. library
+dnl In order to make the origni of the HOMER lib clear, the one in AliRoot
+dnl got the name libAliHLTHOMER
+AC_MSG_CHECKING([for HLT PubSub Framework])
+AC_ARG_WITH(pubsub, [installation path of the HLT PubSub framework],
+                   [],
+                   [ test -n $ALIHLT_DC_DIR && with_pubsub=$ALIHLT_DC_DIR ])
+if test -z $with_pubsub || ! test -d $with_pubsub ; then
+  with_pubsub=no
+fi
+AC_MSG_RESULT([$with_pubsub])
+HOMER_VERSION=2
+HOMER_LIBS=
+
+AH_TEMPLATE([HAVE_HOMERREADER],[the HLT PubSub Homer Reader interface])
+if test "x$with_pubsub" != "xno" ; then
+  save_CPPFLAGS=$CPPFLAGS
+  save_LDFLAGS=$LDFLAGS
+  save_LIBS=$LIBS
+  # currently the different versions of the HLT PubSub framework have a different
+  # directory layout
+  if test -d ${with_pubsub}/include/HOMER ; then
+    # the 'early' location of the include files with separated HOMER sub dirs
+    HOMER_INCDIRS="${with_pubsub}/include/HOMER ${with_pubsub}/include/HOMER/reader"
+  elif test -d ${with_pubsub}/include/Util/HOMER ; then
+    # location for HLT Framework versions after Sep 2006
+    HOMER_INCDIRS="${with_pubsub}/include/Util/HOMER"
+  elif test -d ${with_pubsub}/src/Util/HOMER/include ; then
+    # fall back if include files were not installed (versions after Sep 06)
+    HOMER_INCDIRS="${with_pubsub}/src/Util/HOMER/include"
+  else
+    # fall back if include files were not installed (versions before Sep 06)
+    HOMER_INCDIRS="${with_pubsub}/src/Util/HOMER/reader/include ${with_pubsub}/src/Util/HOMER/data/include"
+  fi
+  HOMER_CPPFLAGS=`for i in ${HOMER_INCDIRS}; do echo -n "-I$i " ; done`
+
+  AC_ARG_ENABLE(pubsub-debug,
+    [AC_HELP_STRING([--disable-pubsub-debug],
+        [force the production version of the PubSub framework])],
+    [],[enable_pubsub_debug=yes])
+  homer_type="none"
+  HOMER_TARGET="`uname -s`-`uname -m`"
+  AC_MSG_CHECKING([for HLT PubSub Framework release type])
+  if test -d "${with_pubsub}/lib/${HOMER_TARGET}-release" ; then
+    homer_type="production"
+    HOMER_TARGET="${HOMER_TARGET}-release"
+  elif test "x$enable_pubsub_debug" = "xyes" && test -d "${with_pubsub}/lib/${HOMER_TARGET}-debug" ; then
+    homer_type="debug"
+    HOMER_TARGET="${HOMER_TARGET}-debug"
+  fi
+  AC_MSG_RESULT([${homer_type}])
+  HOMERREADER_HEADER=HOMERReader.h
+  HOMER_BINDIR="${with_pubsub}/bin/${HOMER_TARGET}"
+  HOMER_LIBDIR="${with_pubsub}/lib/${HOMER_TARGET}"
+  HOMER_LDFLAGS="-L${HOMER_LIBDIR}"
+  CPPFLAGS="$save_CPPFLAGS $HOMER_CPPFLAGS"
+  LDFLAGS="$save_LDFLAGS $HOMER_LDFLAGS"
+  LIBS="$save_LIBS "
+  with_homer=no
+  AC_LANG_PUSH(C++)
+  AC_CHECK_HEADER([$HOMERREADER_HEADER],
+    [ AC_CHECK_LIB([HOMER],[_init],
+      [with_homer=yes
+       HOMER_LIBS="-lHOMER"],
+      [ AC_CHECK_LIB([HOMERReader],[_init],
+                     [with_homer=yes
+                     HOMER_LIBS="-lHOMERReader"])])
+      LIBS="$LIBS $HOMER_LIBS"
+      AC_MSG_CHECKING([version of HOMER library])
+      dnl The Homer library has no versioning, so we do our own
+      dnl version           description
+      dnl ----------------------------------------------------------------------
+      dnl   1          inintial version
+      dnl   2          GetBlockStatusFlags added to the interface
+      AC_LINK_IFELSE([AC_LANG_PROGRAM([#include <HOMERReader.h>],
+                                      [HOMERReader reader("dummy", 0);
+                                      reader.GetBlockStatusFlags(0);])],
+                                      [],
+                                     [HOMER_VERSION=1])
+      AC_MSG_RESULT([$HOMER_VERSION])
+  ],
+  [HOMERREADER_HEADER=]) #AC_CHECK_HEADER([$HOMERREADER_HEADER])
+  AC_LANG_POP(C++)
+  HOMER_INBUILT_LIB=
+else
+dnl no pubsub version defined, check if the HOMER lib is available in AliRoot
+  topdir=`dirname $0`
+  HOMER_CPPFLAGS="-I`(cd $topdir; pwd)`/BASE/HOMER"
+  HOMERREADER_HEADER=AliHLTHOMERReader.h
+  HOMER_INBUILT_LIB=`pwd`/BASE/HOMER/libAliHLTHOMER.la
+  HOMER_BINDIR=
+  HOMER_LIBDIR=
+  HOMER_LDFLAGS=
+fi
+
+  if test "x$with_homer" = "xno" ; then
+    HOMER_CPPFLAGS=
+    HOMER_LDFLAGS=
+    HOMER_LIBS=
+  else
+    HOMER_CPPFLAGS="$HOMER_CPPFLAGS -DHOMER_VERSION=$HOMER_VERSION"
+    AC_DEFINE(HAVE_HOMERREADER)
+  fi
+  CPPFLAGS="$save_CPPFLAGS"
+  LDFLAGS="$save_LDFLAGS"
+  LIBS="$save_LIBS"  
+
+AC_SUBST([HOMERREADER_HEADER])
+AC_SUBST([HOMER_INBUILT_LIB])
+AC_SUBST([HOMER_CPPFLAGS])
+AC_SUBST([HOMER_LDFLAGS])
+AC_SUBST([HOMER_LIBDIR])
+AC_SUBST([HOMER_BINDIR])
+AC_SUBST([HOMER_LIBS])
 
 dnl ------------------------------------------------------------------
 AC_MSG_CHECKING([whether to impose strict coding conventions])
@@ -236,27 +491,58 @@ dnl ------------------------------------------------------------------
 AC_MSG_CHECKING([whether to compile sample library])
 AH_TEMPLATE([HLT_SAMPLE],[hlt sample library])
 AC_ARG_ENABLE(sample,
-  [AC_HELP_STRING([--enable-sample],
+  [AC_HELP_STRING([--disable-sample],
       [compile the sample library ])],
-  [],[enable_sample=yes])
+  [],
+  [if test "x$have_aliroot" = "xno" ; then
+     enable_sample="no...requires.AliRoot"
+   else
+     enable_sample=yes
+   fi
+  ])
+
 if test "x$enable_sample" = "xyes" ; then 
   AC_DEFINE(HLT_SAMPLE)
 fi
 AM_CONDITIONAL(EN_HLT_SAMPLE, test x$enable_sample = xyes)
 AC_MSG_RESULT([$enable_sample])
 
+dnl ------------------------------------------------------------------
+AC_MSG_CHECKING([whether to compile util library])
+AH_TEMPLATE([HLT_UTIL],[HLT utility library])
+AC_ARG_ENABLE(util,
+  [AC_HELP_STRING([--disable-util],
+      [compile the util library ])],
+  [],
+  [if test "x$have_aliroot" = "xno" ; then
+     enable_util="no...requires.AliRoot"
+   else
+     enable_util=yes
+   fi
+  ])
+
+if test "x$enable_util" = "xyes" ; then 
+  AC_DEFINE(HLT_UTIL)
+fi
+AM_CONDITIONAL(EN_HLT_UTIL, test x$enable_util = xyes)
+AC_MSG_RESULT([$enable_util])
+
 dnl ------------------------------------------------------------------
 AC_MSG_CHECKING([whether to compile tpc library])
 AH_TEMPLATE([HLT_TPC],[hlt tpc library])
 AC_ARG_ENABLE(tpc,
-  [AC_HELP_STRING([--enable-tpc],
+  [AC_HELP_STRING([--disable-tpc],
       [compile the tpc library ])],
-  [],[enable_tpc=yes])
-if test "x$have_aliroot" = "xno" ; then
-   enable_tpc="no...requires.AliRoot"
-elif test "x$have_alitpc" = "xno" ; then
-   enable_tpc="no...requires.AliRoot.TPC.libraries"
-fi
+  [],
+  [if test "x$have_aliroot" = "xno" ; then
+     enable_tpc="no...requires.AliRoot"
+   elif test "x$have_alitpc" = "xno" ; then
+     enable_tpc="no...requires.AliRoot.TPC.libraries"
+   else
+     enable_tpc=yes
+   fi
+  ])
+
 if test "x$enable_tpc" = "xyes" ; then 
   AC_DEFINE(HLT_TPC)
 fi
@@ -264,16 +550,82 @@ AM_CONDITIONAL(EN_HLT_TPC, test x$enable_tpc = xyes)
 AC_MSG_RESULT([$enable_tpc])
 
 dnl ------------------------------------------------------------------
-AC_MSG_CHECKING([whether to enable HLT logging])
-AH_TEMPLATE([NOLOGGING],[disable hlt logging])
-AC_ARG_ENABLE(logging,
-  [AC_HELP_STRING([--enable-logging],
-      [enable logging])],
-  [],[enable_logging=yes])
-if test "x$enable_logging" != "xyes" ; then 
-  AC_DEFINE(NOLOGGING)
+AC_MSG_CHECKING([whether to compile phos library])
+AH_TEMPLATE([HLT_PHOS],[hlt phos library])
+AC_ARG_ENABLE(phos,
+  [AC_HELP_STRING([--disable-phos],
+      [compile the phos library ])],
+  [],
+  [if test "x$have_aliroot" = "xno" ; then
+     enable_phos="no...requires.AliRoot"
+   elif ! test "x$have_alicalorawstream" = "xyes"; then
+     enable_phos="no...requires.AliRoot>v4-05-07"
+   else
+     enable_phos=yes
+   fi
+  ])
+
+if test "x$enable_phos" = "xyes" ; then 
+  AC_DEFINE(HLT_PHOS)
+fi
+AM_CONDITIONAL(EN_HLT_PHOS, test x$enable_phos = xyes)
+AC_MSG_RESULT([$enable_phos])
+
+dnl ------------------------------------------------------------------
+AC_MSG_CHECKING([whether to compile trd library])
+AH_TEMPLATE([HLT_TRD],[hlt trd library])
+AC_ARG_ENABLE(trd,
+  [AC_HELP_STRING([--disable-trd],
+      [compile the trd library ])],
+  [],
+  [if test "x$have_aliroot" = "xno" ; then
+     enable_trd="no...requires.AliRoot"
+   else
+     enable_trd=yes
+   fi
+  ])
+
+if test "x$enable_trd" = "xyes" ; then 
+  AC_DEFINE(HLT_TRD)
+fi
+AM_CONDITIONAL(EN_HLT_TRD, test x$enable_trd = xyes)
+AC_MSG_RESULT([$enable_trd])
+
+dnl ------------------------------------------------------------------
+AC_MSG_CHECKING([whether to compile dimuon library])
+AH_TEMPLATE([HLT_MUON],[hlt dimuon library])
+AC_ARG_ENABLE(dimuon,
+  [AC_HELP_STRING([--disable-dimuon],
+      [compile the dimuon library ])],
+  [],
+  [if test "x$have_aliroot" = "xno" ; then
+     enable_dimuon="no...requires.AliRoot"
+   else
+     enable_dimuon=yes
+   fi
+  ])
+
+if test "x$enable_dimuon" = "xyes" ; then 
+  AC_DEFINE(HLT_MUON)
+fi
+AM_CONDITIONAL(EN_HLT_MUON, test x$enable_dimuon = xyes)
+AC_MSG_RESULT([$enable_dimuon])
+
+dnl ------------------------------------------------------------------
+AC_MSG_CHECKING([whether to disable AliRoot logging])
+AH_TEMPLATE([NOALIROOT_LOGGING],[disable AliRoot logging])
+AC_ARG_ENABLE(aliroot-logging,
+  [AC_HELP_STRING([--disable-aliroot-logging],
+      [disable logging through AliRoot logging methods])],
+  [],[enable_aliroot_logging=no])
+if test "x$have_aliroot" = "xno" ; then
+  enable_aliroot_logging=yes # this means 'disable'
 fi
-AC_MSG_RESULT([$enable_logging])
+if test "x$enable_aliroot_logging" != "xno" ; then 
+  AC_DEFINE(NOALIROOT_LOGGING)
+fi
+AM_CONDITIONAL(NOALIROOT_LOGGING, test x$enable_aliroot_logging != no)
+AC_MSG_RESULT([$enable_aliroot_logging])
 
 dnl ------------------------------------------------------------------
 AC_MSG_CHECKING([whether to enable saving MC data through the chain])
@@ -287,18 +639,6 @@ if test "x$enable_mc_saving" = "xyes" ; then
 fi
 AC_MSG_RESULT([$enable_mc_saving])
 
-dnl ------------------------------------------------------------------
-AC_MSG_CHECKING([whether to enable AliRoot NEWIO])
-AH_TEMPLATE([use_newio],[AliRoot NEWIO])
-AC_ARG_ENABLE(newio,
-  [AC_HELP_STRING([--enable-newio],
-      [enable AliRoot NEWIO ])],
-  [],[enable_newio=yes])
-if test "x$enable_newio" = "xyes" ; then 
-  AC_DEFINE(use_newio)
-fi
-AC_MSG_RESULT([$enable_newio])
-
 dnl ------------------------------------------------------------------
 dnl certainly something old, but we keep the define
 AC_MSG_CHECKING([whether to use ROWHOUGH])
@@ -312,6 +652,18 @@ if test "x$enable_rowhough" = "xyes" ; then
 fi
 AC_MSG_RESULT([$enable_rowhough])
 
+dnl ------------------------------------------------------------------
+dnl The ROOTVERSION and ALIROOTVERSION defines were used by the old
+dnl stand-alone build system. This is most likely something old we can
+dnl get rid off later, or do something more reasonable. Since the define
+dnl needs the quotes they have to be  escaped. This works well for the
+dnl Makefile but not for the configure script. So we have to add the
+dnl defines after all the other checks.
+CPPFLAGS="$CPPFLAGS -DROOTVERSION=\\\"`${ROOTCONF} --version`\\\""
+if test ! "x$have_aliroot" = "xno" ; then
+  CPPFLAGS="$CPPFLAGS -DALIROOTVERSION=\\\"Unknown\\\""
+fi
+
 dnl ------------------------------------------------------------------
 dnl
 dnl Documentation
@@ -320,22 +672,49 @@ AC_ARG_VAR(DOXYGEN, The Documentation Generator)
 AC_PATH_PROG(PERL, perl)
 AC_PATH_PROG(DOXYGEN, doxygen)
 AM_CONDITIONAL(HAVE_DOXYGEN, test ! "x$DOXYGEN" = "x")
+AC_ARG_ENABLE(dot,
+  [AC_HELP_STRING([--enable-dot],
+      [enable dot documentation generator])],
+  [],[enable_dot=no])
 HAVE_DOT=NO
 DOT_PATH=
 AC_PATH_PROG(DOT, dot)
-if ! test "x$DOT" = "x" ; then
+if test "x$DOT" != "x" && test "x$enable_dot" = "xyes" ; then
    HAVE_DOT=YES
    DOT_PATH=`dirname $DOT`
 fi
 AC_SUBST([HAVE_DOT])
 AC_SUBST([DOT_PATH])
 
+dnl HAVE_SRC_SUBDIR=${abs_top_srcdir}/src
+dnl echo $HAVE_SRC_SUBDIR
+dnl if ! test -d $HAVE_SRC_SUBDIR; then
+dnl   HAVE_SRC_SUBDIR=
+dnl fi
+dnl AC_SUBST([HAVE_SRC_SUBDIR])
+
+dnl ------------------------------------------------------------------
+dnl inatallation directory for libraries
+dnl 
+if test "x$prefix" != "xNONE" && test $ALICE_ROOT = $prefix ; then
+libdir=\${exec_prefix}/lib/tgt_$ALICE_TARGET
+AC_MSG_NOTICE([libdir set to $libdir])
+fi
 dnl ------------------------------------------------------------------
 AC_CONFIG_FILES([Makefile 
                 BASE/Makefile
+                BASE/setenv.sh
+                BASE/setenv.csh
+                BASE/HOMER/Makefile
+                BASE/util/Makefile
+                BASE/interface/Makefile
                 SampleLib/Makefile
                 TPCLib/Makefile
                 TPCLib/mapping2array.cxx
+                TPCLib/OnlineDisplay/Makefile
+                PHOS/Makefile
+                TRD/Makefile
+                MUON/Makefile
                 doc/Makefile
                 doc/doxygen.conf])