]> git.uio.no Git - u/mrichter/AliRoot.git/blobdiff - HLT/hough/AliL3Hough.cxx
L3 becomes HLT
[u/mrichter/AliRoot.git] / HLT / hough / AliL3Hough.cxx
diff --git a/HLT/hough/AliL3Hough.cxx b/HLT/hough/AliL3Hough.cxx
deleted file mode 100644 (file)
index 6d9776a..0000000
+++ /dev/null
@@ -1,1417 +0,0 @@
-// @(#) $Id$
-
-// Author: Anders Vestbo <mailto:vestbo@fi.uib.no>
-//*-- Copyright &copy ALICE HLT Group
-
-#include "AliL3StandardIncludes.h"
-#include <sys/time.h>
-
-#include "AliL3Logging.h"
-#include "AliL3HoughMerger.h"
-#include "AliL3HoughIntMerger.h"
-#include "AliL3HoughGlobalMerger.h"
-#include "AliL3Histogram.h"
-#include "AliL3Hough.h"
-#include "AliL3HoughTransformer.h"
-#include "AliL3HoughClusterTransformer.h"
-#include "AliL3HoughTransformerLUT.h"
-#include "AliL3HoughTransformerVhdl.h"
-#include "AliL3HoughTransformerRow.h"
-#include "AliL3HoughMaxFinder.h"
-#include "AliL3Benchmark.h"
-#ifdef use_aliroot
-#include "AliL3FileHandler.h"
-#else
-#include "AliL3MemHandler.h"
-#endif
-#include "AliL3DataHandler.h"
-#include "AliL3DigitData.h"
-#include "AliL3HoughEval.h"
-#include "AliL3Transform.h"
-#include "AliL3TrackArray.h"
-#include "AliL3HoughTrack.h"
-#include "AliL3DDLDataFileHandler.h"
-#include "AliL3HoughKalmanTrack.h"
-
-#include "TThread.h"
-
-#if __GNUC__ >= 3
-using namespace std;
-#endif
-
-/** /class AliL3Hough
-//<pre>
-//_____________________________________________________________
-// AliL3Hough
-//
-// Interface class for the Hough transform
-//
-// Example how to use:
-//
-// AliL3Hough *hough = new AliL3Hough(path,kTRUE,NumberOfEtaSegments);
-// hough->ReadData(slice);
-// hough->Transform();
-// hough->FindTrackCandidates();
-// 
-// AliL3TrackArray *tracks = hough->GetTracks(patch);
-//
-//</pre>
-*/
-
-ClassImp(AliL3Hough)
-
-AliL3Hough::AliL3Hough()
-{
-  //Constructor
-  
-  fBinary        = kFALSE;
-  fAddHistograms = kFALSE;
-  fDoIterative   = kFALSE; 
-  fWriteDigits   = kFALSE;
-  fUse8bits      = kFALSE;
-
-  fMemHandler       = 0;
-  fHoughTransformer = 0;
-  fEval             = 0;
-  fPeakFinder       = 0;
-  fTracks           = 0;
-  fGlobalTracks     = 0;
-  fMerger           = 0;
-  fInterMerger      = 0;
-  fGlobalMerger     = 0;
-  fBenchmark        = 0;
-  
-  fNEtaSegments     = 0;
-  fNPatches         = 0;
-  fLastPatch        =-1;
-  fVersion          = 0;
-  fCurrentSlice     = 0;
-  fEvent            = 0;
-  
-  fKappaSpread = 6;
-  fPeakRatio   = 0.5;
-  fInputFile   = 0;
-  fInputPtr    = 0;
-  fRawEvent    = 0;
-  
-  SetTransformerParams();
-  SetThreshold();
-  SetNSaveIterations();
-  SetPeakThreshold();
-#ifdef use_aliroot
-  //just be sure that index is empty for new event
-    AliL3FileHandler::CleanStaticIndex(); 
-#ifdef use_newio
-    fRunLoader = 0;
-#endif
-#endif
-  fThread = 0;
-}
-
-AliL3Hough::AliL3Hough(Char_t *path,Bool_t binary,Int_t netasegments,Bool_t bit8,Int_t tv,Char_t *infile,Char_t *ptr)
-{
-  //Normal constructor
-  fBinary = binary;
-  strcpy(fPath,path);
-  fNEtaSegments  = netasegments;
-  fAddHistograms = kFALSE;
-  fDoIterative   = kFALSE; 
-  fWriteDigits   = kFALSE;
-  fUse8bits      = bit8;
-  fVersion       = tv;
-  fKappaSpread=6;
-  fPeakRatio=0.5;
-  if(!fBinary) {
-    if(infile) {
-      fInputFile = infile;
-      fInputPtr = 0;
-    }
-    else {
-      fInputFile = 0;
-      fInputPtr = ptr;
-    }
-  }
-  else {
-    fInputFile = 0;
-    fInputPtr = 0;
-  }
-#ifdef use_aliroot
-  //just be sure that index is empty for new event
-    AliL3FileHandler::CleanStaticIndex(); 
-#ifdef use_newio
-    fRunLoader = 0;
-#endif
-#endif
-  fThread = 0;
-}
-
-AliL3Hough::~AliL3Hough()
-{
-  //dtor
-
-  CleanUp();
-  if(fMerger)
-    delete fMerger;
-  //cout << "Cleaned class merger " << endl;
-  if(fInterMerger)
-    delete fInterMerger;
-  //cout << "Cleaned class inter " << endl;
-  if(fPeakFinder)
-    delete fPeakFinder;
-  //cout << "Cleaned class peak " << endl;
-  if(fGlobalMerger)
-    delete fGlobalMerger;
-  //cout << "Cleaned class global " << endl;
-  if(fBenchmark)
-    delete fBenchmark;
-  //cout << "Cleaned class bench " << endl;
-  if(fGlobalTracks)
-    delete fGlobalTracks;
-  //cout << "Cleaned class globaltracks " << endl;
-  if(fThread) {
-    //    fThread->Delete();
-    delete fThread;
-    fThread = 0;
-  }
-}
-
-void AliL3Hough::CleanUp()
-{
-  //Cleanup memory
-  
-  for(Int_t i=0; i<fNPatches; i++)
-    {
-      if(fTracks[i]) delete fTracks[i];
-      //cout << "Cleaned tracks " << i << endl;
-      if(fEval[i]) delete fEval[i];
-      //cout << "Cleaned eval " << i << endl;
-      if(fHoughTransformer[i]) delete fHoughTransformer[i];
-      //cout << "Cleaned traf " << i << endl;
-      if(fMemHandler[i]) delete fMemHandler[i];
-      //cout << "Cleaned mem " << i << endl;
-    }
-  
-  if(fTracks) delete [] fTracks;
-  //cout << "Cleaned class tracks " << endl;
-  if(fEval) delete [] fEval;
-  //cout << "Cleaned class eval " << endl;
-  if(fHoughTransformer) delete [] fHoughTransformer;
-  //cout << "Cleaned cleass trafo " << endl;
-  if(fMemHandler) delete [] fMemHandler;
-  //cout << "Cleaned class mem " << endl;
-}
-
-void AliL3Hough::Init(Int_t netasegments,Int_t tv,AliRawEvent *rawevent,Float_t zvertex)
-{
-  //Normal constructor
-  fNEtaSegments  = netasegments;
-  fVersion       = tv;
-  fRawEvent      = rawevent;
-  fZVertex       = zvertex;
-
-  Init();
-}
-
-void AliL3Hough::Init(Char_t *path,Bool_t binary,Int_t netasegments,Bool_t bit8,Int_t tv,Char_t *infile,Char_t *ptr,Float_t zvertex)
-{
-  //Normal init of the AliL3Hough
-  fBinary = binary;
-  strcpy(fPath,path);
-  fNEtaSegments = netasegments;
-  fWriteDigits  = kFALSE;
-  fUse8bits     = bit8;
-  fVersion      = tv;
-  if(!fBinary) {
-    if(infile) {
-      fInputFile = infile;
-      fInputPtr = 0;
-    }
-    else {
-      fInputFile = 0;
-      fInputPtr = ptr;
-    }
-  }
-  else {
-    fInputFile = 0;
-    fInputPtr = 0;
-  }
-  fZVertex = zvertex;
-
-  Init(); //do the rest
-}
-
-void AliL3Hough::Init(Bool_t doit, Bool_t addhists)
-{
-  // Init
-  fDoIterative   = doit; 
-  fAddHistograms = addhists;
-
-  fNPatches = AliL3Transform::GetNPatches();
-  fHoughTransformer = new AliL3HoughBaseTransformer*[fNPatches];
-  fMemHandler = new AliL3MemHandler*[fNPatches];
-
-  fTracks = new AliL3TrackArray*[fNPatches];
-  fEval = new AliL3HoughEval*[fNPatches];
-  
-  fGlobalTracks = new AliL3TrackArray("AliL3HoughTrack");
-  
-  AliL3HoughBaseTransformer *lasttransformer = 0;
-
-  for(Int_t i=0; i<fNPatches; i++)
-    {
-      switch (fVersion){ //choose Transformer
-      case 1: 
-       fHoughTransformer[i] = new AliL3HoughTransformerLUT(0,i,fNEtaSegments);
-       break;
-      case 2:
-       fHoughTransformer[i] = new AliL3HoughClusterTransformer(0,i,fNEtaSegments);
-       break;
-      case 3:
-       fHoughTransformer[i] = new AliL3HoughTransformerVhdl(0,i,fNEtaSegments,fNSaveIterations);
-       break;
-      case 4:
-       fHoughTransformer[i] = new AliL3HoughTransformerRow(0,i,fNEtaSegments,kFALSE,fZVertex);
-       break;
-      default:
-       fHoughTransformer[i] = new AliL3HoughTransformer(0,i,fNEtaSegments,kFALSE,kFALSE);
-      }
-
-      fHoughTransformer[i]->SetLastTransformer(lasttransformer);
-      lasttransformer = fHoughTransformer[i];
-      //      fHoughTransformer[i]->CreateHistograms(fNBinX[i],fLowPt[i],fNBinY[i],-fPhi[i],fPhi[i]);
-      fHoughTransformer[i]->CreateHistograms(fNBinX[i],-fLowPt[i],fLowPt[i],fNBinY[i],-fPhi[i],fPhi[i]);
-      //fHoughTransformer[i]->CreateHistograms(fLowPt[i],fUpperPt[i],fPtRes[i],fNBinY[i],fPhi[i]);
-
-      fHoughTransformer[i]->SetLowerThreshold(fThreshold[i]);
-      fHoughTransformer[i]->SetUpperThreshold(100);
-
-      LOG(AliL3Log::kInformational,"AliL3Hough::Init","Version")
-       <<"Initializing Hough transformer version "<<fVersion<<ENDLOG;
-      
-      fEval[i] = new AliL3HoughEval();
-      fTracks[i] = new AliL3TrackArray("AliL3HoughTrack");
-      if(fUse8bits)
-       fMemHandler[i] = new AliL3DataHandler();
-      else
-#ifdef use_aliroot
-       {
-         if(!fRawEvent) {
-           if(!fInputFile) {
-             if(!fInputPtr) {
-               /* In case of reading digits file */
-               fMemHandler[i] = new AliL3FileHandler(kTRUE); //use static index
-               if(!fBinary) {
-#if use_newio
-                 if(!fRunLoader) {
-#endif
-                   Char_t filename[1024];
-                   sprintf(filename,"%s/digitfile.root",fPath);
-                   fMemHandler[i]->SetAliInput(filename);
-#if use_newio
-                 }
-                 else {
-                   fMemHandler[i]->SetAliInput(fRunLoader);
-                 }
-#endif
-               }
-             }
-             else {
-               /* In case of reading from DATE */
-               fMemHandler[i] = new AliL3DDLDataFileHandler();
-               fMemHandler[i]->SetReaderInput(fInputPtr,-1);
-             }
-           }
-           else {
-             /* In case of reading rawdata from ROOT file */
-             fMemHandler[i] = new AliL3DDLDataFileHandler();
-             fMemHandler[i]->SetReaderInput(fInputFile);
-           }
-         }
-         else {
-           /* In case of reading rawdata using AliRawEvent */
-           fMemHandler[i] = new AliL3DDLDataFileHandler();
-           fMemHandler[i]->SetReaderInput(fRawEvent);
-         }
-       }
-#else
-      fMemHandler[i] = new AliL3MemHandler();
-#endif
-    }
-
-  fPeakFinder = new AliL3HoughMaxFinder("KappaPhi",50000);
-  if(fVersion!=4) {
-    fMerger = new AliL3HoughMerger(fNPatches);
-    fInterMerger = new AliL3HoughIntMerger();
-  }
-  else {
-    fMerger = 0;
-    fInterMerger = 0;
-  }
-  fGlobalMerger = 0;
-  fBenchmark = new AliL3Benchmark();
-}
-
-void AliL3Hough::SetTransformerParams(Float_t ptres,Float_t ptmin,Float_t ptmax,Int_t ny,Int_t patch)
-{
-  // Setup the parameters for the Hough Transformer
-  // This includes the bin size and limits for
-  // the parameter space histograms
-
-  Int_t mrow;
-  Float_t psi=0;
-  if(patch==-1)
-    mrow = 80;
-  else
-    mrow = AliL3Transform::GetLastRow(patch);
-  if(ptmin)
-    {
-      Double_t lineradius = sqrt(pow(AliL3Transform::Row2X(mrow),2) + pow(AliL3Transform::GetMaxY(mrow),2));
-      Double_t kappa = -1*AliL3Transform::GetBField()*AliL3Transform::GetBFact()/ptmin;
-      psi = AliL3Transform::Deg2Rad(10) - asin(lineradius*kappa/2);
-      cout<<"Calculated psi range "<<psi<<" in patch "<<patch<<endl;
-    }
-
-  if(patch==-1)
-    {
-      Int_t i=0;
-      while(i < 6)
-       {
-         fPtRes[i] = ptres;
-         fLowPt[i] = ptmin;
-         fUpperPt[i] = ptmax;
-         fNBinY[i] = ny;
-         fPhi[i] = psi;
-         fNBinX[i]=0;
-         i++;
-       }
-      return;
-    }
-
-  fPtRes[patch] = ptres;
-  fLowPt[patch] = ptmin;
-  fUpperPt[patch] = ptmax;
-  fNBinY[patch] = ny;
-  fPhi[patch] = psi;
-}
-/*
-void AliL3Hough::SetTransformerParams(Int_t nx,Int_t ny,Float_t ptmin,Int_t patch)
-{
-  // Setup the parameters for the Hough Transformer
-
-  Int_t mrow=80;
-  Double_t lineradius = sqrt(pow(AliL3Transform::Row2X(mrow),2) + pow(AliL3Transform::GetMaxY(mrow),2));
-  Double_t kappa = -1*AliL3Transform::GetBField()*AliL3Transform::GetBFact()/ptmin;
-  Double_t psi = AliL3Transform::Deg2Rad(10) - asin(lineradius*kappa/2);
-  cout<<"Calculated psi range "<<psi<<" in patch "<<patch<<endl;
-  
-  Int_t i=0;
-  while(i < 6)
-    {
-      fLowPt[i] = ptmin;
-      fNBinY[i] = ny;
-      fNBinX[i] = nx;
-      fPhi[i] = psi;
-      i++;
-    }
-}
-*/
-void AliL3Hough::SetTransformerParams(Int_t nx,Int_t ny,Float_t ptmin,Int_t /*patch*/)
-{
-  // Setup the parameters for the Hough Transformer
-
-  Double_t lineradius = 1.0/(AliL3HoughTransformerRow::GetBeta1()*sqrt(1.0+tan(AliL3Transform::Pi()*10/180)*tan(AliL3Transform::Pi()*10/180)));
-  Double_t alpha1 = AliL3HoughTransformerRow::GetBeta1()*tan(AliL3Transform::Pi()*10/180);
-  Double_t kappa = 1*AliL3Transform::GetBField()*AliL3Transform::GetBFact()/(ptmin*0.9);
-  Double_t psi = AliL3Transform::Deg2Rad(10) - asin(lineradius*kappa/2);
-  //  cout<<"Calculated psi range "<<psi<<" in patch "<<patch<<endl;
-  Double_t alpha2 = alpha1 - (AliL3HoughTransformerRow::GetBeta1()-AliL3HoughTransformerRow::GetBeta2())*tan(psi);
-  //  cout<<"Calculated alphas range "<<alpha1<<" "<<alpha2<<" in patch "<<patch<<endl;
-
-  Int_t i=0;
-  while(i < 6)
-    {
-      fLowPt[i] = 1.1*alpha1;
-      fNBinY[i] = ny;
-      fNBinX[i] = nx;
-      fPhi[i] = alpha2;
-      i++;
-    }
-}
-
-void AliL3Hough::CalcTransformerParams(Float_t ptmin)
-{
-  // Setup the parameters for the Row Hough Transformer
-  // Automatically adjusts the number of bins in X and Y in a way
-  // that the size of the hough bin is 2x (in X) and 2.5 (in Y) the
-  // size of the tpc pads
-
-  Double_t lineradius = 1.0/(AliL3HoughTransformerRow::GetBeta1()*sqrt(1.0+tan(AliL3Transform::Pi()*10/180)*tan(AliL3Transform::Pi()*10/180)));
-  Double_t alpha1 = AliL3HoughTransformerRow::GetBeta1()*tan(AliL3Transform::Pi()*10/180);
-  Double_t kappa = 1*AliL3Transform::GetBField()*AliL3Transform::GetBFact()/(ptmin*0.9);
-  Double_t psi = AliL3Transform::Deg2Rad(10) - asin(lineradius*kappa/2);
-  //  cout<<"Calculated psi range "<<psi<<endl;
-  Double_t alpha2 = alpha1 - (AliL3HoughTransformerRow::GetBeta1()-AliL3HoughTransformerRow::GetBeta2())*tan(psi);
-  alpha1 *= 1.1;
-  //  cout<<"Calculated alphas range "<<alpha1<<" "<<alpha2<<endl;
-
-  Double_t sizex = 2.0*AliL3Transform::GetPadPitchWidthLow()*AliL3HoughTransformerRow::GetBeta1()*AliL3HoughTransformerRow::GetBeta1();
-  Double_t sizey = 2.5*AliL3Transform::GetPadPitchWidthUp()*AliL3HoughTransformerRow::GetBeta2()*AliL3HoughTransformerRow::GetBeta2();
-
-  Int_t nx = 2*(Int_t)(alpha1/sizex)+1;
-  Int_t ny = 2*(Int_t)(alpha2/sizey)+1;
-  //  cout<<"Calculated number of bins "<<nx<<" "<<ny<<endl;
-
-  Int_t i=0;
-  while(i < 6)
-    {
-      fLowPt[i] = alpha1;
-      fNBinY[i] = ny;
-      fNBinX[i] = nx;
-      fPhi[i] = alpha2;
-      i++;
-    }
-}
-
-void AliL3Hough::SetTransformerParams(Int_t nx,Int_t ny,Float_t lpt,Float_t phi)
-{
-  Int_t i=0;
-  while(i < 6)
-    {
-      fLowPt[i] = lpt;
-      fNBinY[i] = ny;
-      fNBinX[i] = nx;
-      fPhi[i] = phi;
-      i++;
-    }
-}
-
-void AliL3Hough::SetThreshold(Int_t t3,Int_t patch)
-{
-  // Set digits threshold
-  if(patch==-1)
-    {
-      Int_t i=0;
-      while(i < 6)
-       fThreshold[i++]=t3;
-      return;
-    }
-  fThreshold[patch]=t3;
-}
-
-void AliL3Hough::SetPeakThreshold(Int_t threshold,Int_t patch)
-{
-  // Set Peak Finder threshold
-  if(patch==-1)
-    {
-      Int_t i=0;
-      while(i < 6)
-       fPeakThreshold[i++]=threshold;
-      return;
-    }
-  fPeakThreshold[patch]=threshold;
-}
-
-void AliL3Hough::DoBench(Char_t *name)
-{
-  fBenchmark->Analyze(name);
-}
-
-void AliL3Hough::Process(Int_t minslice,Int_t maxslice)
-{
-  //Process all slices [minslice,maxslice].
-  fGlobalMerger = new AliL3HoughGlobalMerger(minslice,maxslice);
-  
-  for(Int_t i=minslice; i<=maxslice; i++)
-    {
-      ReadData(i);
-      Transform();
-      if(fAddHistograms) {
-       if(fVersion != 4)
-         AddAllHistograms();
-       else
-         AddAllHistogramsRows();
-      }
-      FindTrackCandidates();
-      //Evaluate();
-      //fGlobalMerger->FillTracks(fTracks[0],i);
-    }
-}
-
-void AliL3Hough::ReadData(Int_t slice,Int_t eventnr)
-{
-  //Read data from files, binary or root.
-  
-#ifdef use_aliroot
-  if(fEvent!=eventnr) //just be sure that index is empty for new event
-    AliL3FileHandler::CleanStaticIndex(); 
-#endif
-  fCurrentSlice = slice;
-
-  for(Int_t i=0; i<fNPatches; i++)
-    {
-      fMemHandler[i]->Free();
-      UInt_t ndigits=0;
-      AliL3DigitRowData *digits =0;
-      Char_t name[256];
-      fMemHandler[i]->Init(slice,i);
-      if(fBinary)//take input data from binary files
-       {
-         if(fUse8bits)
-           sprintf(name,"%s/binaries/digits_c8_%d_%d_%d.raw",fPath,eventnr,slice,i);
-         else
-           sprintf(name,"%s/binaries/digits_%d_%d_%d.raw",fPath,eventnr,slice,i);
-
-         fMemHandler[i]->SetBinaryInput(name);
-         digits = (AliL3DigitRowData *)fMemHandler[i]->CompBinary2Memory(ndigits);
-         fMemHandler[i]->CloseBinaryInput();
-       }
-      else //read data from root file
-       {
-#ifdef use_aliroot
-         if(fEvent!=eventnr)
-           fMemHandler[i]->FreeDigitsTree();//or else the new event is not loaded
-         digits=(AliL3DigitRowData *)fMemHandler[i]->AliAltroDigits2Memory(ndigits,eventnr);
-#else
-         cerr<<"You cannot read from rootfile now"<<endl;
-#endif
-       }
-
-      //Set the pointer to the TPCRawStream in case of fast raw data reading
-      fHoughTransformer[i]->SetTPCRawStream(fMemHandler[i]->GetTPCRawStream());
-
-      //set input data and init transformer
-      fHoughTransformer[i]->SetInputData(ndigits,digits);
-      fHoughTransformer[i]->Init(slice,i,fNEtaSegments);
-    }
-
-  fEvent=eventnr;
-}
-
-void AliL3Hough::Transform(Int_t *rowrange)
-{
-  //Transform all data given to the transformer within the given slice
-  //(after ReadData(slice))
-  
-  Double_t initTime,cpuTime;
-  initTime = GetCpuTime();
-  Int_t patchorder[6] = {5,2,0,1,3,4}; //The order in which patches are processed
-  //  Int_t patchorder[6] = {0,1,2,3,4,5}; //The order in which patches are processed
-  //  Int_t patchorder[6] = {5,4,3,2,1,0}; //The order in which patches are processed
-  //  Int_t patchorder[6] = {5,2,4,3,1,0}; //The order in which patches are processed
-  fLastPatch=-1;
-  for(Int_t i=0; i<fNPatches; i++)
-    {
-      // In case of Row transformer reset the arrays only once
-      if((fVersion != 4) || (i == 0)) {
-       fBenchmark->Start("Hough Reset");
-       fHoughTransformer[0]->Reset();//Reset the histograms
-       fBenchmark->Stop("Hough Reset");
-      }
-      fBenchmark->Start("Hough Transform");
-      PrepareForNextPatch(patchorder[i]);
-      if(!rowrange) {
-       char buf[256];
-       sprintf(buf,"Patch %d",patchorder[i]);
-       fBenchmark->Start(buf);
-       fHoughTransformer[patchorder[i]]->SetLastPatch(fLastPatch);
-       fHoughTransformer[patchorder[i]]->TransformCircle();
-       fBenchmark->Stop(buf);
-      }
-      else
-       fHoughTransformer[i]->TransformCircleC(rowrange,1);
-      fBenchmark->Stop("Hough Transform");
-      fLastPatch=patchorder[i];
-    }
-  cpuTime = GetCpuTime() - initTime;
-  LOG(AliL3Log::kInformational,"AliL3Hough::Transform()","Timing")
-    <<"Transform done in average per patch of "<<cpuTime*1000/fNPatches<<" ms"<<ENDLOG;
-}
-
-void AliL3Hough::MergePatches()
-{
-  // Merge patches if they are not summed
-  if(fAddHistograms) //Nothing to merge here
-    return;
-  fMerger->MergePatches(kTRUE);
-}
-
-void AliL3Hough::MergeInternally()
-{
-  // Merge patches internally
-  if(fAddHistograms)
-    fInterMerger->FillTracks(fTracks[0]);
-  else
-    fInterMerger->FillTracks(fMerger->GetOutTracks());
-  
-  fInterMerger->MMerge();
-}
-
-void AliL3Hough::ProcessSliceIter()
-{
-  //Process current slice (after ReadData(slice)) iteratively.
-  
-  if(!fAddHistograms)
-    {
-      for(Int_t i=0; i<fNPatches; i++)
-       {
-         ProcessPatchIter(i);
-         fMerger->FillTracks(fTracks[i],i); //Copy tracks to merger
-       }
-    }
-  else
-    {
-      for(Int_t i=0; i<10; i++)
-       {
-         Transform();
-         AddAllHistograms();
-         InitEvaluate();
-         AliL3HoughBaseTransformer *tr = fHoughTransformer[0];
-         for(Int_t j=0; j<fNEtaSegments; j++)
-           {
-             AliL3Histogram *hist = tr->GetHistogram(j);
-             if(hist->GetNEntries()==0) continue;
-             fPeakFinder->Reset();
-             fPeakFinder->SetHistogram(hist);
-             fPeakFinder->FindAbsMaxima();
-             AliL3HoughTrack *track = (AliL3HoughTrack*)fTracks[0]->NextTrack();
-             track->SetTrackParameters(fPeakFinder->GetXPeak(0),fPeakFinder->GetYPeak(0),fPeakFinder->GetWeight(0));
-             track->SetEtaIndex(j);
-             track->SetEta(tr->GetEta(j,fCurrentSlice));
-             for(Int_t k=0; k<fNPatches; k++)
-               {
-                 fEval[i]->SetNumOfPadsToLook(2);
-                 fEval[i]->SetNumOfRowsToMiss(2);
-                 fEval[i]->RemoveFoundTracks();
-                 /*
-                 Int_t nrows=0;
-                 if(!fEval[i]->LookInsideRoad(track,nrows))
-                   {
-                     fTracks[0]->Remove(fTracks[0]->GetNTracks()-1);
-                     fTracks[0]->Compress();
-                   }
-                 */
-               }
-           }
-         
-       }
-      
-    }
-}
-
-void AliL3Hough::ProcessPatchIter(Int_t patch)
-{
-  //Process patch in a iterative way. 
-  //transform + peakfinding + evaluation + transform +...
-
-  Int_t numoftries = 5;
-  AliL3HoughBaseTransformer *tr = fHoughTransformer[patch];
-  AliL3TrackArray *tracks = fTracks[patch];
-  tracks->Reset();
-  AliL3HoughEval *ev = fEval[patch];
-  ev->InitTransformer(tr);
-  //ev->RemoveFoundTracks();
-  ev->SetNumOfRowsToMiss(3);
-  ev->SetNumOfPadsToLook(2);
-  AliL3Histogram *hist;
-  for(Int_t t=0; t<numoftries; t++)
-    {
-      tr->Reset();
-      tr->TransformCircle();
-      for(Int_t i=0; i<fNEtaSegments; i++)
-       {
-         hist = tr->GetHistogram(i);
-         if(hist->GetNEntries()==0) continue;
-         fPeakFinder->Reset();
-         fPeakFinder->SetHistogram(hist);
-         fPeakFinder->FindAbsMaxima();
-         //fPeakFinder->FindPeak1();
-         AliL3HoughTrack *track = (AliL3HoughTrack*)tracks->NextTrack();
-         track->SetTrackParameters(fPeakFinder->GetXPeak(0),fPeakFinder->GetYPeak(0),fPeakFinder->GetWeight(0));
-         track->SetEtaIndex(i);
-         track->SetEta(tr->GetEta(i,fCurrentSlice));
-         /*
-         Int_t nrows=0;
-         if(!ev->LookInsideRoad(track,nrows))
-           {   
-             tracks->Remove(tracks->GetNTracks()-1);
-             tracks->Compress();
-           }
-         */
-       }
-    }
-  fTracks[0]->QSort();
-  LOG(AliL3Log::kInformational,"AliL3Hough::ProcessPatch","NTracks")
-    <<AliL3Log::kDec<<"Found "<<tracks->GetNTracks()<<" tracks in patch "<<patch<<ENDLOG;
-}
-
-void AliL3Hough::AddAllHistograms()
-{
-  //Add the histograms within one etaslice.
-  //Resulting histogram are in patch=0.
-
-  Double_t initTime,cpuTime;
-  initTime = GetCpuTime();
-  fBenchmark->Start("Add Histograms");
-  for(Int_t i=0; i<fNEtaSegments; i++)
-    {
-      AliL3Histogram *hist0 = fHoughTransformer[0]->GetHistogram(i);
-      for(Int_t j=1; j<fNPatches; j++)
-       {
-         AliL3Histogram *hist = fHoughTransformer[j]->GetHistogram(i);
-         hist0->Add(hist);
-       }
-    }
-  fBenchmark->Stop("Add Histograms");
-  fAddHistograms = kTRUE;
-  cpuTime = GetCpuTime() - initTime;
-  LOG(AliL3Log::kInformational,"AliL3Hough::AddAllHistograms()","Timing")
-    <<"Adding histograms in "<<cpuTime*1000<<" ms"<<ENDLOG;
-}
-
-void AliL3Hough::AddAllHistogramsRows()
-{
-  //Add the histograms within one etaslice.
-  //Resulting histogram are in patch=0.
-
-  Double_t initTime,cpuTime;
-  initTime = GetCpuTime();
-  fBenchmark->Start("Add HistogramsRows");
-
-  UChar_t lastpatchlastrow = AliL3Transform::GetLastRowOnDDL(fLastPatch)+1;
-
-  UChar_t *tracklastrow = ((AliL3HoughTransformerRow *)fHoughTransformer[0])->GetTrackLastRow();
-
-  for(Int_t i=0; i<fNEtaSegments; i++)
-    {
-      UChar_t *gapcount = ((AliL3HoughTransformerRow *)fHoughTransformer[0])->GetGapCount(i);
-      UChar_t *currentrowcount = ((AliL3HoughTransformerRow *)fHoughTransformer[0])->GetCurrentRowCount(i);
-
-      AliL3Histogram *hist = fHoughTransformer[0]->GetHistogram(i);
-      Int_t xmin = hist->GetFirstXbin();
-      Int_t xmax = hist->GetLastXbin();
-      Int_t ymin = hist->GetFirstYbin();
-      Int_t ymax = hist->GetLastYbin();
-      Int_t nxbins = hist->GetNbinsX()+2;
-
-      for(Int_t ybin=ymin; ybin<=ymax; ybin++)
-       {
-         for(Int_t xbin=xmin; xbin<=xmax; xbin++)
-           {
-             Int_t bin = xbin + ybin*nxbins; //Int_t bin = hist->GetBin(xbin,ybin);
-             if(gapcount[bin] < MAX_N_GAPS) {
-               if(tracklastrow[bin] > lastpatchlastrow) {
-                 if(lastpatchlastrow > currentrowcount[bin])
-                   gapcount[bin] += (lastpatchlastrow-currentrowcount[bin]-1);
-               }
-               else {
-                 if(tracklastrow[bin] > currentrowcount[bin])
-                   gapcount[bin] += (tracklastrow[bin]-currentrowcount[bin]-1);
-               }
-               if(gapcount[bin] < MAX_N_GAPS)
-                 hist->AddBinContent(bin,(159-gapcount[bin]));
-             }
-           }
-       }
-    }
-
-  fBenchmark->Stop("Add HistogramsRows");
-  fAddHistograms = kTRUE;
-  cpuTime = GetCpuTime() - initTime;
-  LOG(AliL3Log::kInformational,"AliL3Hough::AddAllHistogramsRows()","Timing")
-    <<"Adding histograms in "<<cpuTime*1000<<" ms"<<ENDLOG;
-}
-
-void AliL3Hough::PrepareForNextPatch(Int_t nextpatch)
-{
-  // Prepare the parameter space for the processing of
-  // the next read patch. According to the already
-  // accumulated number of gaps in parameter space
-  // bins, the routine updates the dynamic
-  // pointers used in order to jump rapidly during the
-  // filling of the parameter space.
-
-  char buf[256];
-  sprintf(buf,"Prepare For Patch %d",nextpatch);
-  fBenchmark->Start(buf);
-
-  UChar_t lastpatchlastrow;
-  if(fLastPatch == -1)
-    lastpatchlastrow = 0;
-  else
-    lastpatchlastrow = AliL3Transform::GetLastRowOnDDL(fLastPatch)+1;
-  UChar_t nextpatchfirstrow;
-  if(nextpatch==0)
-    nextpatchfirstrow = 0;
-  else
-    nextpatchfirstrow = AliL3Transform::GetFirstRowOnDDL(nextpatch)-1;
-
-  UChar_t *trackfirstrow = ((AliL3HoughTransformerRow *)fHoughTransformer[0])->GetTrackFirstRow();
-  UChar_t *tracklastrow = ((AliL3HoughTransformerRow *)fHoughTransformer[0])->GetTrackLastRow();
-
-  for(Int_t i=0; i<fNEtaSegments; i++)
-    {
-      UChar_t *gapcount = ((AliL3HoughTransformerRow *)fHoughTransformer[0])->GetGapCount(i);
-      UChar_t *currentrowcount = ((AliL3HoughTransformerRow *)fHoughTransformer[0])->GetCurrentRowCount(i);
-      UChar_t *prevbin = ((AliL3HoughTransformerRow *)fHoughTransformer[0])->GetPrevBin(i);
-      UChar_t *nextbin = ((AliL3HoughTransformerRow *)fHoughTransformer[0])->GetNextBin(i);
-      UChar_t *nextrow = ((AliL3HoughTransformerRow *)fHoughTransformer[0])->GetNextRow(i);
-
-      AliL3Histogram *hist = fHoughTransformer[0]->GetHistogram(i);
-      Int_t xmin = hist->GetFirstXbin();
-      Int_t xmax = hist->GetLastXbin();
-      Int_t ymin = hist->GetFirstYbin();
-      Int_t ymax = hist->GetLastYbin();
-      Int_t nxbins = hist->GetNbinsX()+2;
-
-      if(fLastPatch != -1) {
-       UChar_t lastyvalue = 0;
-       Int_t endybin = ymin - 1;
-       for(Int_t ybin=nextrow[ymin]; ybin<=ymax; ybin = nextrow[++ybin])
-         {
-           UChar_t lastxvalue = 0;
-           UChar_t maxvalue = 0;
-           Int_t endxbin = xmin - 1;
-           for(Int_t xbin=xmin; xbin<=xmax; xbin++)
-             {
-               Int_t bin = xbin + ybin*nxbins;
-               UChar_t value = 0;
-               if(gapcount[bin] < MAX_N_GAPS) {
-                 if(tracklastrow[bin] > lastpatchlastrow) {
-                   if(lastpatchlastrow > currentrowcount[bin])
-                     gapcount[bin] += (lastpatchlastrow-currentrowcount[bin]-1);
-                 }
-                 else {
-                   if(tracklastrow[bin] > currentrowcount[bin])
-                     gapcount[bin] += (tracklastrow[bin]-currentrowcount[bin]-1);
-                 }
-                 if(gapcount[bin] < MAX_N_GAPS) {
-                   value = 1;
-                   maxvalue = 1;
-                   if(trackfirstrow[bin] < nextpatchfirstrow)
-                     currentrowcount[bin] = nextpatchfirstrow;
-                   else
-                     currentrowcount[bin] = trackfirstrow[bin];
-                 }
-               }
-               if(value > 0)
-                 {
-                   nextbin[xbin + ybin*nxbins] = (UChar_t)xbin;
-                   prevbin[xbin + ybin*nxbins] = (UChar_t)xbin;
-                   if(value > lastxvalue)
-                     {
-                       UChar_t *tempnextbin = nextbin + endxbin + 1 + ybin*nxbins;
-                       memset(tempnextbin,(UChar_t)xbin,xbin-endxbin-1);
-                     }
-                   endxbin = xbin;
-                 }
-               else
-                 {
-                   prevbin[xbin + ybin*nxbins] = (UChar_t)endxbin;
-                 }
-               lastxvalue = value;
-             }
-           UChar_t *tempnextbin = nextbin + endxbin + 1 + ybin*nxbins;
-           memset(tempnextbin,(UChar_t)(xmax+1),xmax-endxbin);
-           if(maxvalue > 0)
-             {
-               nextrow[ybin] = (UChar_t)ybin;
-               if(maxvalue > lastyvalue)
-                 {
-                   UChar_t *tempnextrow = nextrow + endybin + 1;
-                   memset(tempnextrow,(UChar_t)ybin,ybin-endybin-1);
-                 }
-               endybin = ybin;
-             }
-           lastyvalue = maxvalue;
-         }
-       UChar_t *tempnextrow = nextrow + endybin + 1;
-       memset(tempnextrow,(UChar_t)(ymax+1),ymax-endybin+1);
-      }
-      else {
-       UChar_t lastyvalue = 0;
-       Int_t endybin = ymin - 1;
-       for(Int_t ybin=ymin; ybin<=ymax; ybin++)
-         {
-           UChar_t maxvalue = 0;
-           for(Int_t xbin=xmin; xbin<=xmax; xbin++)
-             {
-               Int_t bin = xbin + ybin*nxbins;
-               if(gapcount[bin] < MAX_N_GAPS) {
-                 maxvalue = 1;
-                 if(trackfirstrow[bin] < nextpatchfirstrow)
-                   currentrowcount[bin] = nextpatchfirstrow;
-                 else
-                   currentrowcount[bin] = trackfirstrow[bin];
-               }
-             }
-           if(maxvalue > 0)
-             {
-               nextrow[ybin] = (UChar_t)ybin;
-               if(maxvalue > lastyvalue)
-                 {
-                   UChar_t *tempnextrow = nextrow + endybin + 1;
-                   memset(tempnextrow,(UChar_t)ybin,ybin-endybin-1);
-                 }
-               endybin = ybin;
-             }
-           lastyvalue = maxvalue;
-         }
-       UChar_t *tempnextrow = nextrow + endybin + 1;
-       memset(tempnextrow,(UChar_t)(ymax+1),ymax-endybin+1);
-      }
-    }
-
-  fBenchmark->Stop(buf);
-}
-
-void AliL3Hough::AddTracks()
-{
-  // Add current slice slice tracks to the global list of found tracks
-  if(!fTracks[0])
-    {
-      cerr<<"AliL3Hough::AddTracks : No tracks"<<endl;
-      return;
-    }
-  AliL3TrackArray *tracks = fTracks[0];
-  for(Int_t i=0; i<tracks->GetNTracks(); i++)
-    {
-      AliL3Track *track = tracks->GetCheckedTrack(i);
-      if(!track) continue;
-      if(track->GetNHits()!=1) cerr<<"NHITS "<<track->GetNHits()<<endl;
-      UInt_t *ids = track->GetHitNumbers();
-      ids[0] = (fCurrentSlice&0x7f)<<25;
-    }
-  
-  fGlobalTracks->AddTracks(fTracks[0],0,fCurrentSlice);
-}
-
-void AliL3Hough::FindTrackCandidatesRow()
-{
-  // Find AliL3HoughTransformerRow track candidates
-  if(fVersion != 4) {
-    LOG(AliL3Log::kError,"AliL3Hough::FindTrackCandidatesRow()","")
-      <<"Incompatible Peak Finder version!"<<ENDLOG;
-    return;
-  }
-
-  //Look for peaks in histograms, and find the track candidates
-  Int_t npatches;
-  if(fAddHistograms)
-    npatches = 1; //Histograms have been added.
-  else
-    npatches = fNPatches;
-  
-  Double_t initTime,cpuTime;
-  initTime = GetCpuTime();
-  fBenchmark->Start("Find Maxima");
-  for(Int_t i=0; i<npatches; i++)
-    {
-      AliL3HoughBaseTransformer *tr = fHoughTransformer[i];
-      AliL3Histogram *h = tr->GetHistogram(0);
-      Float_t deltax = h->GetBinWidthX()*AliL3HoughTransformerRow::GetDAlpha();
-      Float_t deltay = h->GetBinWidthY()*AliL3HoughTransformerRow::GetDAlpha();
-      Float_t deltaeta = (tr->GetEtaMax()-tr->GetEtaMin())/tr->GetNEtaSegments()*AliL3HoughTransformerRow::GetDEta();
-      Float_t zvertex = tr->GetZVertex();
-      fTracks[i]->Reset();
-      fPeakFinder->Reset();
-      
-      for(Int_t j=0; j<fNEtaSegments; j++)
-       {
-         AliL3Histogram *hist = tr->GetHistogram(j);
-         if(hist->GetNEntries()==0) continue;
-         fPeakFinder->SetHistogram(hist);
-         fPeakFinder->SetEtaSlice(j);
-         fPeakFinder->SetTrackLUTs(((AliL3HoughTransformerRow *)tr)->GetTrackNRows(),((AliL3HoughTransformerRow *)tr)->GetTrackFirstRow(),((AliL3HoughTransformerRow *)tr)->GetTrackLastRow(),((AliL3HoughTransformerRow *)tr)->GetNextRow(j));
-#ifdef do_mc
-         LOG(AliL3Log::kInformational,"AliL3Hough::FindTrackCandidates()","")
-           <<"Starting "<<j<<" etaslice"<<ENDLOG;
-#endif
-         fPeakFinder->SetThreshold(fPeakThreshold[i]);
-         fPeakFinder->FindAdaptedRowPeaks(1,0,0);//Maxima finder for HoughTransformerRow
-       }
-  
-      for(Int_t k=0; k<fPeakFinder->GetEntries(); k++)
-       {
-         //      if(fPeakFinder->GetWeight(k) < 0) continue;
-         AliL3HoughTrack *track = (AliL3HoughTrack*)fTracks[i]->NextTrack();
-         Double_t starteta = tr->GetEta(fPeakFinder->GetStartEta(k),fCurrentSlice);
-         Double_t endeta = tr->GetEta(fPeakFinder->GetEndEta(k),fCurrentSlice);
-         Double_t eta = (starteta+endeta)/2.0;
-         track->SetTrackParametersRow(fPeakFinder->GetXPeak(k),fPeakFinder->GetYPeak(k),eta,fPeakFinder->GetWeight(k));
-         track->SetPterr(deltax); track->SetPsierr(deltay); track->SetTglerr(deltaeta);
-         track->SetBinXY(fPeakFinder->GetXPeak(k),fPeakFinder->GetYPeak(k),fPeakFinder->GetXPeakSize(k),fPeakFinder->GetYPeakSize(k));
-         track->SetZ0(zvertex);
-         Int_t etaindex = (fPeakFinder->GetStartEta(k)+fPeakFinder->GetEndEta(k))/2;
-         track->SetEtaIndex(etaindex);
-         Int_t rows[2];
-         ((AliL3HoughTransformerRow *)tr)->GetTrackLength(fPeakFinder->GetXPeak(k),fPeakFinder->GetYPeak(k),rows);
-         track->SetRowRange(rows[0],rows[1]);
-         track->SetSector(fCurrentSlice);
-         track->SetSlice(fCurrentSlice);
-#ifdef do_mc
-         Int_t label = tr->GetTrackID(etaindex,fPeakFinder->GetXPeak(k),fPeakFinder->GetYPeak(k));
-         track->SetMCid(label);
-#endif
-       }
-      LOG(AliL3Log::kInformational,"AliL3Hough::FindTrackCandidates()","")
-       <<"Found "<<fTracks[i]->GetNTracks()<<" tracks in slice "<<fCurrentSlice<<ENDLOG;
-      fTracks[i]->QSort();
-    }
-  fBenchmark->Stop("Find Maxima");
-  cpuTime = GetCpuTime() - initTime;
-  LOG(AliL3Log::kInformational,"AliL3Hough::FindTrackCandidates()","Timing")
-    <<"Maxima finding done in "<<cpuTime*1000<<" ms"<<ENDLOG;
-}
-
-void AliL3Hough::FindTrackCandidates()
-{
-  // Find AliL3HoughTransformer track candidates
-  if(fVersion == 4) {
-    LOG(AliL3Log::kError,"AliL3Hough::FindTrackCandidatesRow()","")
-      <<"Incompatible Peak Finder version!"<<ENDLOG;
-    return;
-  }
-
-  Int_t npatches;
-  if(fAddHistograms)
-    npatches = 1; //Histograms have been added.
-  else
-    npatches = fNPatches;
-  
-  Double_t initTime,cpuTime;
-  initTime = GetCpuTime();
-  fBenchmark->Start("Find Maxima");
-  for(Int_t i=0; i<npatches; i++)
-    {
-      AliL3HoughBaseTransformer *tr = fHoughTransformer[i];
-      fTracks[i]->Reset();
-      
-      for(Int_t j=0; j<fNEtaSegments; j++)
-       {
-         AliL3Histogram *hist = tr->GetHistogram(j);
-         if(hist->GetNEntries()==0) continue;
-         fPeakFinder->Reset();
-         fPeakFinder->SetHistogram(hist);
-#ifdef do_mc
-         cout<<"Starting "<<j<<" etaslice"<<endl;
-#endif
-         fPeakFinder->SetThreshold(fPeakThreshold[i]);
-         fPeakFinder->FindAdaptedPeaks(fKappaSpread,fPeakRatio);
-         
-         for(Int_t k=0; k<fPeakFinder->GetEntries(); k++)
-           {
-             AliL3HoughTrack *track = (AliL3HoughTrack*)fTracks[i]->NextTrack();
-             track->SetTrackParameters(fPeakFinder->GetXPeak(k),fPeakFinder->GetYPeak(k),fPeakFinder->GetWeight(k));
-             track->SetEtaIndex(j);
-             track->SetEta(tr->GetEta(j,fCurrentSlice));
-             track->SetRowRange(AliL3Transform::GetFirstRow(0),AliL3Transform::GetLastRow(5));
-           }
-       }
-      cout<<"Found "<<fTracks[i]->GetNTracks()<<" tracks in patch "<<i<<endl;
-      fTracks[i]->QSort();
-    }
-  fBenchmark->Stop("Find Maxima");
-  cpuTime = GetCpuTime() - initTime;
-  LOG(AliL3Log::kInformational,"AliL3Hough::FindTrackCandidates()","Timing")
-    <<"Maxima finding done in "<<cpuTime*1000<<" ms"<<ENDLOG;
-}
-
-void AliL3Hough::InitEvaluate()
-{
-  //Pass the transformer objects to the AliL3HoughEval objects:
-  //This will provide the evaluation objects with all the necessary
-  //data and parameters it needs.
-  
-  for(Int_t i=0; i<fNPatches; i++) 
-    fEval[i]->InitTransformer(fHoughTransformer[i]);
-}
-
-Int_t AliL3Hough::Evaluate(Int_t roadwidth,Int_t nrowstomiss)
-{
-  //Evaluate the tracks, by looking along the road in the raw data.
-  //If track does not cross all padrows - rows2miss, it is removed from the arrray.
-  //If histograms were not added, the check is done locally in patch,
-  //meaning that nrowstomiss is the number of padrows the road can miss with respect
-  //to the number of rows in the patch.
-  //If the histograms were added, the comparison is done globally in the _slice_, 
-  //meaing that nrowstomiss is the number of padrows the road can miss with
-  //respect to the total number of padrows in the slice.
-  //
-  //Return value = number of tracks which were removed (only in case of fAddHistograms)
-  
-  if(!fTracks[0])
-    {
-      LOG(AliL3Log::kError,"AliL3Hough::Evaluate","Track Array")
-       <<"No tracks to work with..."<<ENDLOG;
-      return 0;
-    }
-  
-  Int_t removedtracks=0;
-  AliL3TrackArray *tracks=0;
-
-  if(fAddHistograms)
-    {
-      tracks = fTracks[0];
-      for(Int_t i=0; i<tracks->GetNTracks(); i++)
-       {
-         AliL3Track *track = tracks->GetCheckedTrack(i);
-         if(!track) continue;
-         track->SetNHits(0);
-       }
-    }
-  
-  for(Int_t i=0; i<fNPatches; i++)
-    EvaluatePatch(i,roadwidth,nrowstomiss);
-  
-  //Here we check the tracks globally; 
-  //how many good rows (padrows with signal) 
-  //did it cross in the slice
-  if(fAddHistograms) 
-    {
-      for(Int_t j=0; j<tracks->GetNTracks(); j++)
-       {
-         AliL3HoughTrack *track = (AliL3HoughTrack*)tracks->GetCheckedTrack(j);
-         
-         if(track->GetNHits() < AliL3Transform::GetNRows() - nrowstomiss)
-           {
-             tracks->Remove(j);
-             removedtracks++;
-           }
-       }
-      tracks->Compress();
-      tracks->QSort();
-    }
-    
-  return removedtracks;
-}
-
-void AliL3Hough::EvaluatePatch(Int_t i,Int_t roadwidth,Int_t nrowstomiss)
-{
-  //Evaluate patch i.
-  
-  fEval[i]->InitTransformer(fHoughTransformer[i]);
-  fEval[i]->SetNumOfPadsToLook(roadwidth);
-  fEval[i]->SetNumOfRowsToMiss(nrowstomiss);
-  //fEval[i]->RemoveFoundTracks();
-  
-  AliL3TrackArray *tracks=0;
-  
-  if(!fAddHistograms)
-    tracks = fTracks[i];
-  else
-    tracks = fTracks[0];
-  
-  Int_t nrows=0;
-  for(Int_t j=0; j<tracks->GetNTracks(); j++)
-    {
-      AliL3HoughTrack *track = (AliL3HoughTrack*)tracks->GetCheckedTrack(j);
-      if(!track)
-       {
-         LOG(AliL3Log::kWarning,"AliL3Hough::EvaluatePatch","Track array")
-           <<"Track object missing!"<<ENDLOG;
-         continue;
-       } 
-      nrows=0;
-      Int_t rowrange[2] = {AliL3Transform::GetFirstRow(i),AliL3Transform::GetLastRow(i)};
-      Bool_t result = fEval[i]->LookInsideRoad(track,nrows,rowrange);
-      if(fAddHistograms)
-       {
-         Int_t pre=track->GetNHits();
-         track->SetNHits(pre+nrows);
-       }
-      else//the track crossed too few good padrows (padrows with signal) in the patch, so remove it
-       {
-         if(result == kFALSE)
-           tracks->Remove(j);
-       }
-    }
-  
-  tracks->Compress();
-
-}
-
-void AliL3Hough::MergeEtaSlices()
-{
-  //Merge tracks found in neighbouring eta slices.
-  //Removes the track with the lower weight.
-  
-  fBenchmark->Start("Merge Eta-slices");
-  AliL3TrackArray *tracks = fTracks[0];
-  if(!tracks)
-    {
-      cerr<<"AliL3Hough::MergeEtaSlices : No tracks "<<endl;
-      return;
-    }
-  for(Int_t j=0; j<tracks->GetNTracks(); j++)
-    {
-      AliL3HoughTrack *track1 = (AliL3HoughTrack*)tracks->GetCheckedTrack(j);
-      if(!track1) continue;
-      for(Int_t k=j+1; k<tracks->GetNTracks(); k++)
-       {
-         AliL3HoughTrack *track2 = (AliL3HoughTrack*)tracks->GetCheckedTrack(k);
-         if(!track2) continue;
-         if(abs(track1->GetEtaIndex() - track2->GetEtaIndex()) != 1) continue;
-         if(fabs(track1->GetKappa()-track2->GetKappa()) < 0.006 && 
-            fabs(track1->GetPsi()- track2->GetPsi()) < 0.1)
-           {
-             //cout<<"Merging track in slices "<<track1->GetEtaIndex()<<" "<<track2->GetEtaIndex()<<endl;
-             if(track1->GetWeight() > track2->GetWeight())
-               tracks->Remove(k);
-             else
-               tracks->Remove(j);
-           }
-       }
-    }
-  fBenchmark->Stop("Merge Eta-slices");
-  tracks->Compress();
-}
-
-void AliL3Hough::WriteTracks(Char_t *path)
-{
-  // Write found tracks into file
-  //cout<<"AliL3Hough::WriteTracks : Sorting the tracsk"<<endl;
-  //fGlobalTracks->QSort();
-  
-  Char_t filename[1024];
-  sprintf(filename,"%s/tracks_%d.raw",path,fEvent);
-  AliL3MemHandler mem;
-  mem.SetBinaryOutput(filename);
-  mem.TrackArray2Binary(fGlobalTracks);
-  mem.CloseBinaryOutput();
-  fGlobalTracks->Reset();
-}
-
-void AliL3Hough::WriteTracks(Int_t slice,Char_t *path)
-{
-  // Write found tracks slice by slice into file
-  
-  AliL3MemHandler mem;
-  Char_t fname[100];
-  if(fAddHistograms)
-    {
-      sprintf(fname,"%s/tracks_ho_%d_%d.raw",path,fEvent,slice);
-      mem.SetBinaryOutput(fname);
-      mem.TrackArray2Binary(fTracks[0]);
-      mem.CloseBinaryOutput();
-    }
-  else 
-    {
-      for(Int_t i=0; i<fNPatches; i++)
-       {
-         sprintf(fname,"%s/tracks_ho_%d_%d_%d.raw",path,fEvent,slice,i);
-         mem.SetBinaryOutput(fname);
-         mem.TrackArray2Binary(fTracks[i]);
-         mem.CloseBinaryOutput();
-       }
-    }
-}
-
-#ifdef use_aliroot
-Int_t AliL3Hough::FillESD(AliESD *esd)
-{
-  // Fill the found hough transform tracks
-  // into the ESD. The tracks are stored as
-  // AliESDHLTtrack objects.
-
-  // No TPC PID so far,assuming pions
-  Double_t prob[AliPID::kSPECIES];
-  for(Int_t i=0;i<AliPID::kSPECIES;i++) {
-    if(i==AliPID::kPion) prob[i]=1.0;
-    else prob[i]=0.1;
-  }
-
-  if(!fGlobalTracks) return 0;
-  Int_t nglobaltracks = 0;
-  for(Int_t i=0; i<fGlobalTracks->GetNTracks(); i++)
-    {
-      AliL3HoughTrack *tpt = (AliL3HoughTrack *)fGlobalTracks->GetCheckedTrack(i);
-      if(!tpt) continue; 
-      
-      if(tpt->GetWeight()<0) continue;
-      AliL3HoughKalmanTrack *tpctrack = new AliL3HoughKalmanTrack(*tpt);
-      if(!tpctrack) continue;
-      AliESDtrack *esdtrack2 = new AliESDtrack() ; 
-      esdtrack2->UpdateTrackParams(tpctrack,AliESDtrack::kTPCin);
-      esdtrack2->SetESDpid(prob);
-      esd->AddTrack(esdtrack2);
-      nglobaltracks++;
-      delete esdtrack2;
-      delete tpctrack;
-    }
-  return nglobaltracks;
-}
-#endif
-
-void AliL3Hough::WriteDigits(Char_t *outfile)
-{
-  //Write the current data to a new rootfile.
-#ifdef use_aliroot  
-
-  for(Int_t i=0; i<fNPatches; i++)
-    {
-      AliL3DigitRowData *tempPt = (AliL3DigitRowData*)fHoughTransformer[i]->GetDataPointer();
-      fMemHandler[i]->AliDigits2RootFile(tempPt,outfile);
-    }
-#else
-  cerr<<"AliL3Hough::WriteDigits : You need to compile with AliROOT!"<<endl;
-  return;
-#endif  
-}
-
-Double_t AliL3Hough::GetCpuTime()
-{
-  //Return the Cputime in seconds.
- struct timeval tv;
- gettimeofday( &tv, NULL );
- return tv.tv_sec+(((Double_t)tv.tv_usec)/1000000.);
-}
-
-void *AliL3Hough::ProcessInThread(void *args)
-{
-  // Called in case Hough transform tracking
-  // is executed in a thread
-
-  AliL3Hough *instance = (AliL3Hough *)args;
-  Int_t minslice = instance->GetMinSlice();
-  Int_t maxslice = instance->GetMaxSlice();
-  for(Int_t i=minslice; i<=maxslice; i++)
-    {
-      instance->ReadData(i,0);
-      instance->Transform();
-      instance->AddAllHistogramsRows();
-      instance->FindTrackCandidatesRow();
-      instance->AddTracks();
-    }
-  return (void *)0;
-}
-
-void AliL3Hough::StartProcessInThread(Int_t minslice,Int_t maxslice)
-{
-  // Starts the Hough transform tracking as a
-  // separate thread. Takes as parameters the
-  // range of TPC slices (sectors) to be reconstructed
-
-  if(!fThread) {
-    char buf[255];
-    sprintf(buf,"houghtrans_%d_%d",minslice,maxslice);
-    SetMinMaxSlices(minslice,maxslice);
-    //    fThread = new TThread(buf,(void (*) (void *))&ProcessInThread,(void *)this);
-    fThread = new TThread(buf,&ProcessInThread,(void *)this);
-    fThread->Run();
-  }
-  return;
-}
-
-Int_t AliL3Hough::WaitForThreadFinish()
-{
-  // Routine is used in case we run the
-  // Hough transform tracking in several
-  // threads and want to sync them before
-  // writing the results to the ESD
-
-#if ROOT_VERSION_CODE < 262403
-  return TThread::Join(fThread->GetId());
-#else
-  return fThread->Join(fThread->GetId());
-#endif
-}